ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast76b06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X15869.1|HVNADPHP Barley mRNA for NADPH-protochlorophyllide oxidoreductase (PCR) Length = 1490 Score = 866 bits (437), Expect = 0.0 Identities = 437/437 (100%) Strand = Plus / Plus Query: 1 cgctggcggtgaggacgcaggtggccacggcgccttcgccggtgacgacgagcccgggct 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 215 cgctggcggtgaggacgcaggtggccacggcgccttcgccggtgacgacgagcccgggct 274 Query: 61 cgaccgcgtcgtcgccgagcggcaagaagacgctgcggcagggcgtggtggtgatcacgg 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 cgaccgcgtcgtcgccgagcggcaagaagacgctgcggcagggcgtggtggtgatcacgg 334 Query: 121 gcgcgtcatccgggctgggcctggcggcggccaaggcgctggccgagacgggcaagtggc 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 335 gcgcgtcatccgggctgggcctggcggcggccaaggcgctggccgagacgggcaagtggc 394 Query: 181 acgtcgtcatggcgtgccgcgacttcctcaaggcctccaaggcggccaaggcggcgggca 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 395 acgtcgtcatggcgtgccgcgacttcctcaaggcctccaaggcggccaaggcggcgggca 454 Query: 241 tggcggacggcagctacaccgtcatgcacctcgacctcgcctccctcgacagcgtccggc 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 455 tggcggacggcagctacaccgtcatgcacctcgacctcgcctccctcgacagcgtccggc 514 Query: 301 agttcgttgacgcgttccgccgcgccgagatgccgctggatgtgctggtgtgcaacgccg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 515 agttcgttgacgcgttccgccgcgccgagatgccgctggatgtgctggtgtgcaacgccg 574 Query: 361 ccatctaccggcccacggcgcgcacgccgaccttcaccgccgacgggcacgagatgagcg 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 575 ccatctaccggcccacggcgcgcacgccgaccttcaccgccgacgggcacgagatgagcg 634 Query: 421 tgggcgtgaaccacctg 437 ||||||||||||||||| Sbjct: 635 tgggcgtgaaccacctg 651
>emb|X76532.1|TAPWR5PI Triticum aestivium pWR5 RNA for protochlorophyilide reductase Length = 1484 Score = 682 bits (344), Expect = 0.0 Identities = 413/436 (94%) Strand = Plus / Plus Query: 1 cgctggcggtgaggacgcaggtggccacggcgccttcgccggtgacgacgagcccgggct 60 |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 194 cgctagcggtgaggacgcaggtggccacggcgccttcgtcggtgacgacgagcccgggct 253 Query: 61 cgaccgcgtcgtcgccgagcggcaagaagacgctgcggcagggcgtggtggtgatcacgg 120 || | || || ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 254 cggcgacggcgaagccgagcggcaagaagacgctgcggcagggcgtggtggtgatcacgg 313 Query: 121 gcgcgtcatccgggctgggcctggcggcggccaaggcgctggccgagacgggcaagtggc 180 ||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 314 gcgcgtcgtccgggctgggtctggcggcggccaaggcgctggcagagacgggcaagtggc 373 Query: 181 acgtcgtcatggcgtgccgcgacttcctcaaggcctccaaggcggccaaggcggcgggca 240 |||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 374 acgtggtcatggcgtgccgcgacttcctcaaggcatccaaggcggccaaggcggcaggca 433 Query: 241 tggcggacggcagctacaccgtcatgcacctcgacctcgcctccctcgacagcgtccggc 300 |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 434 tggcagacggcagctacaccgtcatgcacctcgacctcgcctcgctcgacagcgtccggc 493 Query: 301 agttcgttgacgcgttccgccgcgccgagatgccgctggatgtgctggtgtgcaacgccg 360 ||||||| || |||||||||||||| |||||||||||||| ||||| ||||||||||||| Sbjct: 494 agttcgtggatgcgttccgccgcgcagagatgccgctggacgtgctcgtgtgcaacgccg 553 Query: 361 ccatctaccggcccacggcgcgcacgccgaccttcaccgccgacgggcacgagatgagcg 420 |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 554 ccatttaccgccccacggcgcgcacgccgaccttcaccgccgacgggcacgagatgagcg 613 Query: 421 tgggcgtgaaccacct 436 |||||||||||||||| Sbjct: 614 tgggcgtgaaccacct 629
>emb|X17067.1|ASPCR Avena sativa mRNA for protochlorophyllide reductase Length = 1146 Score = 472 bits (238), Expect = e-130 Identities = 310/334 (92%) Strand = Plus / Plus Query: 103 gcgtggtggtgatcacgggcgcgtcatccgggctgggcctggcggcggccaaggcgctgg 162 ||||||||||||||||||||||||| || || || ||||| ||||||||||||||||||| Sbjct: 1 gcgtggtggtgatcacgggcgcgtcgtcgggcctcggcctcgcggcggccaaggcgctgg 60 Query: 163 ccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctcaaggcctccaagg 222 | |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| Sbjct: 61 cggagacgggcaagtggcacgtggtcatggcgtgccgcgacttcctcaaggcgtccaagg 120 Query: 223 cggccaaggcggcgggcatggcggacggcagctacaccgtcatgcacctcgacctcgcct 282 | |||||||||||||||||||||||||| |||||||| || |||||||| |||||||||| Sbjct: 121 ccgccaaggcggcgggcatggcggacgggagctacacggtgatgcacctggacctcgcct 180 Query: 283 ccctcgacagcgtccggcagttcgttgacgcgttccgccgcgccgagatgccgctggatg 342 ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| | Sbjct: 181 ccctcgacagcgtccggcagttcgtggacgccttccgccgcgccgagatgccgctggacg 240 Query: 343 tgctggtgtgcaacgccgccatctaccggcccacggcgcgcacgccgaccttcaccgccg 402 |||||||||||||||||||||||||||| ||||||||||||| |||||| |||||||| | Sbjct: 241 tgctggtgtgcaacgccgccatctaccgccccacggcgcgcaagccgacgttcaccgctg 300 Query: 403 acgggcacgagatgagcgtgggcgtgaaccacct 436 | ||| |||||||||||||||||| |||||||| Sbjct: 301 agggggtcgagatgagcgtgggcgtcaaccacct 334
>ref|XM_474360.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1164 Score = 361 bits (182), Expect = 1e-96 Identities = 311/354 (87%) Strand = Plus / Plus Query: 84 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 143 |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || Sbjct: 202 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 261 Query: 144 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 203 |||||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||||| Sbjct: 262 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 321 Query: 204 ttcctcaaggcctccaaggcggccaaggcggcgggcatggcggacggcagctacaccgtc 263 ||||| ||||| | | |||||| ||||||||||| ||||||| || |||||||||||| Sbjct: 322 ttcctgaaggcggcgacggcggcgaaggcggcggggatggcggcggggagctacaccgtc 381 Query: 264 atgcacctcgacctcgcctccctcgacagcgtccggcagttcgttgacgcgttccgccgc 323 |||||||| |||||||||||||||||||||||||| |||||||| ||| ||||| ||| Sbjct: 382 atgcacctggacctcgcctccctcgacagcgtccgccagttcgtggacaacttccggcgc 441 Query: 324 gccgagatgccgctggatgtgctggtgtgcaacgccgccatctaccggcccacggcgcgc 383 ||| |||||||| || | |||||||||||||||||||||||||||||| |||||||| Sbjct: 442 tccggcatgccgctcgacgcgctggtgtgcaacgccgccatctaccggccgacggcgcgg 501 Query: 384 acgccgaccttcaccgccgacgggcacgagatgagcgtgggcgtgaaccacctg 437 |||||| ||||||||||||||| ||||||||||||| || |||||||||||| Sbjct: 502 cagccgacgttcaccgccgacgggtacgagatgagcgtcggggtgaaccacctg 555
>emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0017I01, complete sequence Length = 133331 Score = 361 bits (182), Expect = 1e-96 Identities = 311/354 (87%) Strand = Plus / Plus Query: 84 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 143 |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || Sbjct: 4144 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 4203 Query: 144 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 203 |||||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||||| Sbjct: 4204 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 4263 Query: 204 ttcctcaaggcctccaaggcggccaaggcggcgggcatggcggacggcagctacaccgtc 263 ||||| ||||| | | |||||| ||||||||||| ||||||| || |||||||||||| Sbjct: 4264 ttcctgaaggcggcgacggcggcgaaggcggcggggatggcggcggggagctacaccgtc 4323 Query: 264 atgcacctcgacctcgcctccctcgacagcgtccggcagttcgttgacgcgttccgccgc 323 |||||||| |||||||||||||||||||||||||| |||||||| ||| ||||| ||| Sbjct: 4324 atgcacctggacctcgcctccctcgacagcgtccgccagttcgtggacaacttccggcgc 4383 Query: 324 gccgagatgccgctggatgtgctggtgtgcaacgccgccatctaccggcccacggcgcgc 383 ||| |||||||| || | |||||||||||||||||||||||||||||| |||||||| Sbjct: 4384 tccggcatgccgctcgacgcgctggtgtgcaacgccgccatctaccggccgacggcgcgg 4443 Query: 384 acgccgaccttcaccgccgacgggcacgagatgagcgtgggcgtgaaccacctg 437 |||||| ||||||||||||||| ||||||||||||| || |||||||||||| Sbjct: 4444 cagccgacgttcaccgccgacgggtacgagatgagcgtcggggtgaaccacctg 4497
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 361 bits (182), Expect = 1e-96 Identities = 311/354 (87%) Strand = Plus / Plus Query: 84 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 143 |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || Sbjct: 34698582 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 34698641 Query: 144 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 203 |||||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||||| Sbjct: 34698642 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 34698701 Query: 204 ttcctcaaggcctccaaggcggccaaggcggcgggcatggcggacggcagctacaccgtc 263 ||||| ||||| | | |||||| ||||||||||| ||||||| || |||||||||||| Sbjct: 34698702 ttcctgaaggcggcgacggcggcgaaggcggcggggatggcggcggggagctacaccgtc 34698761 Query: 264 atgcacctcgacctcgcctccctcgacagcgtccggcagttcgttgacgcgttccgccgc 323 |||||||| |||||||||||||||||||||||||| |||||||| ||| ||||| ||| Sbjct: 34698762 atgcacctggacctcgcctccctcgacagcgtccgccagttcgtggacaacttccggcgc 34698821 Query: 324 gccgagatgccgctggatgtgctggtgtgcaacgccgccatctaccggcccacggcgcgc 383 ||| |||||||| || | |||||||||||||||||||||||||||||| |||||||| Sbjct: 34698822 tccggcatgccgctcgacgcgctggtgtgcaacgccgccatctaccggccgacggcgcgg 34698881 Query: 384 acgccgaccttcaccgccgacgggcacgagatgagcgtgggcgtgaaccacctg 437 |||||| ||||||||||||||| ||||||||||||| || |||||||||||| Sbjct: 34698882 cagccgacgttcaccgccgacgggtacgagatgagcgtcggggtgaaccacctg 34698935
>dbj|AK104855.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-B11, full insert sequence Length = 1384 Score = 361 bits (182), Expect = 1e-96 Identities = 311/354 (87%) Strand = Plus / Plus Query: 84 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 143 |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || Sbjct: 274 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 333 Query: 144 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 203 |||||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||||| Sbjct: 334 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 393 Query: 204 ttcctcaaggcctccaaggcggccaaggcggcgggcatggcggacggcagctacaccgtc 263 ||||| ||||| | | |||||| ||||||||||| ||||||| || |||||||||||| Sbjct: 394 ttcctgaaggcggcgacggcggcgaaggcggcggggatggcggcggggagctacaccgtc 453 Query: 264 atgcacctcgacctcgcctccctcgacagcgtccggcagttcgttgacgcgttccgccgc 323 |||||||| |||||||||||||||||||||||||| |||||||| ||| ||||| ||| Sbjct: 454 atgcacctggacctcgcctccctcgacagcgtccgccagttcgtggacaacttccggcgc 513 Query: 324 gccgagatgccgctggatgtgctggtgtgcaacgccgccatctaccggcccacggcgcgc 383 ||| |||||||| || | |||||||||||||||||||||||||||||| |||||||| Sbjct: 514 tccggcatgccgctcgacgcgctggtgtgcaacgccgccatctaccggccgacggcgcgg 573 Query: 384 acgccgaccttcaccgccgacgggcacgagatgagcgtgggcgtgaaccacctg 437 |||||| ||||||||||||||| ||||||||||||| || |||||||||||| Sbjct: 574 cagccgacgttcaccgccgacgggtacgagatgagcgtcggggtgaaccacctg 627
>dbj|AK103940.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G08, full insert sequence Length = 1384 Score = 361 bits (182), Expect = 1e-96 Identities = 311/354 (87%) Strand = Plus / Plus Query: 84 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 143 |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || Sbjct: 274 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 333 Query: 144 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 203 |||||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||||| Sbjct: 334 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 393 Query: 204 ttcctcaaggcctccaaggcggccaaggcggcgggcatggcggacggcagctacaccgtc 263 ||||| ||||| | | |||||| ||||||||||| ||||||| || |||||||||||| Sbjct: 394 ttcctgaaggcggcgacggcggcgaaggcggcggggatggcggcggggagctacaccgtc 453 Query: 264 atgcacctcgacctcgcctccctcgacagcgtccggcagttcgttgacgcgttccgccgc 323 |||||||| |||||||||||||||||||||||||| |||||||| ||| ||||| ||| Sbjct: 454 atgcacctggacctcgcctccctcgacagcgtccgccagttcgtggacaacttccggcgc 513 Query: 324 gccgagatgccgctggatgtgctggtgtgcaacgccgccatctaccggcccacggcgcgc 383 ||| |||||||| || | |||||||||||||||||||||||||||||| |||||||| Sbjct: 514 tccggcatgccgctcgacgcgctggtgtgcaacgccgccatctaccggccgacggcgcgg 573 Query: 384 acgccgaccttcaccgccgacgggcacgagatgagcgtgggcgtgaaccacctg 437 |||||| ||||||||||||||| ||||||||||||| || |||||||||||| Sbjct: 574 cagccgacgttcaccgccgacgggtacgagatgagcgtcggggtgaaccacctg 627
>dbj|AK065236.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002H23, full insert sequence Length = 1385 Score = 361 bits (182), Expect = 1e-96 Identities = 311/354 (87%) Strand = Plus / Plus Query: 84 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 143 |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || Sbjct: 275 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 334 Query: 144 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 203 |||||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||||| Sbjct: 335 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 394 Query: 204 ttcctcaaggcctccaaggcggccaaggcggcgggcatggcggacggcagctacaccgtc 263 ||||| ||||| | | |||||| ||||||||||| ||||||| || |||||||||||| Sbjct: 395 ttcctgaaggcggcgacggcggcgaaggcggcggggatggcggcggggagctacaccgtc 454 Query: 264 atgcacctcgacctcgcctccctcgacagcgtccggcagttcgttgacgcgttccgccgc 323 |||||||| |||||||||||||||||||||||||| |||||||| ||| ||||| ||| Sbjct: 455 atgcacctggacctcgcctccctcgacagcgtccgccagttcgtggacaacttccggcgc 514 Query: 324 gccgagatgccgctggatgtgctggtgtgcaacgccgccatctaccggcccacggcgcgc 383 ||| |||||||| || | |||||||||||||||||||||||||||||| |||||||| Sbjct: 515 tccggcatgccgctcgacgcgctggtgtgcaacgccgccatctaccggccgacggcgcgg 574 Query: 384 acgccgaccttcaccgccgacgggcacgagatgagcgtgggcgtgaaccacctg 437 |||||| ||||||||||||||| ||||||||||||| || |||||||||||| Sbjct: 575 cagccgacgttcaccgccgacgggtacgagatgagcgtcggggtgaaccacctg 628
>emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0402C08, complete sequence Length = 100836 Score = 361 bits (182), Expect = 1e-96 Identities = 311/354 (87%) Strand = Plus / Plus Query: 84 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 143 |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || Sbjct: 96506 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 96565 Query: 144 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 203 |||||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||||| Sbjct: 96566 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 96625 Query: 204 ttcctcaaggcctccaaggcggccaaggcggcgggcatggcggacggcagctacaccgtc 263 ||||| ||||| | | |||||| ||||||||||| ||||||| || |||||||||||| Sbjct: 96626 ttcctgaaggcggcgacggcggcgaaggcggcggggatggcggcggggagctacaccgtc 96685 Query: 264 atgcacctcgacctcgcctccctcgacagcgtccggcagttcgttgacgcgttccgccgc 323 |||||||| |||||||||||||||||||||||||| |||||||| ||| ||||| ||| Sbjct: 96686 atgcacctggacctcgcctccctcgacagcgtccgccagttcgtggacaacttccggcgc 96745 Query: 324 gccgagatgccgctggatgtgctggtgtgcaacgccgccatctaccggcccacggcgcgc 383 ||| |||||||| || | |||||||||||||||||||||||||||||| |||||||| Sbjct: 96746 tccggcatgccgctcgacgcgctggtgtgcaacgccgccatctaccggccgacggcgcgg 96805 Query: 384 acgccgaccttcaccgccgacgggcacgagatgagcgtgggcgtgaaccacctg 437 |||||| ||||||||||||||| ||||||||||||| || |||||||||||| Sbjct: 96806 cagccgacgttcaccgccgacgggtacgagatgagcgtcggggtgaaccacctg 96859
>emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0801D08, complete sequence Length = 103264 Score = 361 bits (182), Expect = 1e-96 Identities = 311/354 (87%) Strand = Plus / Plus Query: 84 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 143 |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || Sbjct: 41602 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 41661 Query: 144 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 203 |||||||| ||||||||||| |||||||| ||||||||||| || ||||||||||||||| Sbjct: 41662 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtgatggcgtgccgcgac 41721 Query: 204 ttcctcaaggcctccaaggcggccaaggcggcgggcatggcggacggcagctacaccgtc 263 ||||| ||||| | | |||||| ||||||||||| ||||||| || |||||||||||| Sbjct: 41722 ttcctgaaggcggcgacggcggcgaaggcggcggggatggcggcggggagctacaccgtc 41781 Query: 264 atgcacctcgacctcgcctccctcgacagcgtccggcagttcgttgacgcgttccgccgc 323 |||||||| |||||||||||||||||||||||||| |||||||| ||| ||||| ||| Sbjct: 41782 atgcacctggacctcgcctccctcgacagcgtccgccagttcgtggacaacttccggcgc 41841 Query: 324 gccgagatgccgctggatgtgctggtgtgcaacgccgccatctaccggcccacggcgcgc 383 ||| |||||||| || | |||||||||||||||||||||||||||||| |||||||| Sbjct: 41842 tccggcatgccgctcgacgcgctggtgtgcaacgccgccatctaccggccgacggcgcgg 41901 Query: 384 acgccgaccttcaccgccgacgggcacgagatgagcgtgggcgtgaaccacctg 437 |||||| ||||||||||||||| ||||||||||||| || |||||||||||| Sbjct: 41902 cagccgacgttcaccgccgacgggtacgagatgagcgtcggggtgaaccacctg 41955
>dbj|AK103943.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-G12, full insert sequence Length = 1384 Score = 353 bits (178), Expect = 3e-94 Identities = 310/354 (87%) Strand = Plus / Plus Query: 84 aagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctg 143 |||||||||||||||||||| |||||||||||||| |||||||| || ||||| || || Sbjct: 274 aagaagacgctgcggcagggggtggtggtgatcaccggcgcgtcgtcggggctcgggctc 333 Query: 144 gcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgac 203 |||||||| ||||||||||| |||||||| ||||||||||| || |||||||||||||| Sbjct: 334 gcggcggcgaaggcgctggcggagacggggaagtggcacgtggtggtggcgtgccgcgac 393 Query: 204 ttcctcaaggcctccaaggcggccaaggcggcgggcatggcggacggcagctacaccgtc 263 ||||| ||||| | | |||||| ||||||||||| ||||||| || |||||||||||| Sbjct: 394 ttcctgaaggcggcgacggcggcgaaggcggcggggatggcggcggggagctacaccgtc 453 Query: 264 atgcacctcgacctcgcctccctcgacagcgtccggcagttcgttgacgcgttccgccgc 323 |||||||| |||||||||||||||||||||||||| |||||||| ||| ||||| ||| Sbjct: 454 atgcacctggacctcgcctccctcgacagcgtccgccagttcgtggacaacttccggcgc 513 Query: 324 gccgagatgccgctggatgtgctggtgtgcaacgccgccatctaccggcccacggcgcgc 383 ||| |||||||| || | |||||||||||||||||||||||||||||| |||||||| Sbjct: 514 tccggcatgccgctcgacgcgctggtgtgcaacgccgccatctaccggccgacggcgcgg 573 Query: 384 acgccgaccttcaccgccgacgggcacgagatgagcgtgggcgtgaaccacctg 437 |||||| ||||||||||||||| ||||||||||||| || |||||||||||| Sbjct: 574 cagccgacgttcaccgccgacgggtacgagatgagcgtcggggtgaaccacctg 627
>ref|NM_197169.1| Oryza sativa (japonica cultivar-group) putative dehydrogenase (OSJNBa0017E08.8), mRNA Length = 1564 Score = 180 bits (91), Expect = 3e-42 Identities = 193/227 (85%) Strand = Plus / Plus Query: 81 ggcaagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggc 140 |||||| |||||||||| ||||| || ||| ||||| |||||||| |||||||| ||| Sbjct: 306 ggcaagcagacgctgcgcaagggcacggcggtcatcaccggcgcgtcgtccgggcttggc 365 Query: 141 ctggcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgc 200 || ||| |||| ||||||||||| |||||||||| ||||||||||||||||| ||||||| Sbjct: 366 ctcgcgacggcgaaggcgctggcggagacgggcaggtggcacgtcgtcatggggtgccgc 425 Query: 201 gacttcctcaaggcctccaaggcggccaaggcggcgggcatggcggacggcagctacacc 260 |||||||||||||| || || |||||||| || ||||||| | | |||||||||||| Sbjct: 426 gacttcctcaaggcgtcgcgcgccgccaaggccgccggcatggagaagggcagctacacc 485 Query: 261 gtcatgcacctcgacctcgcctccctcgacagcgtccggcagttcgt 307 || | ||||||||||| || || |||||||||||| |||||||||| Sbjct: 486 atcgtccacctcgacctggcgtcgctcgacagcgtcaggcagttcgt 532 Score = 56.0 bits (28), Expect = 1e-04 Identities = 78/92 (84%), Gaps = 2/92 (2%) Strand = Plus / Plus Query: 346 tggtgtgcaacgccgccatctaccggcccacggcgc-gcacgccgaccttcaccgccgac 404 ||||||||||||||||| | |||| |||||| || ||| ||||| ||||||||||||| Sbjct: 571 tggtgtgcaacgccgccgtgtaccagcccaccgccaagca-gccgagcttcaccgccgac 629 Query: 405 gggcacgagatgagcgtgggcgtgaaccacct 436 || |||||||||||| ||||| |||||||| Sbjct: 630 ggcttcgagatgagcgtcggcgtcaaccacct 661
>gb|AC068923.12| Oryza sativa chromosome 10 BAC OSJNBa0017E08 genomic sequence, complete sequence Length = 136120 Score = 180 bits (91), Expect = 3e-42 Identities = 193/227 (85%) Strand = Plus / Minus Query: 81 ggcaagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggc 140 |||||| |||||||||| ||||| || ||| ||||| |||||||| |||||||| ||| Sbjct: 120731 ggcaagcagacgctgcgcaagggcacggcggtcatcaccggcgcgtcgtccgggcttggc 120672 Query: 141 ctggcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgc 200 || ||| |||| ||||||||||| |||||||||| ||||||||||||||||| ||||||| Sbjct: 120671 ctcgcgacggcgaaggcgctggcggagacgggcaggtggcacgtcgtcatggggtgccgc 120612 Query: 201 gacttcctcaaggcctccaaggcggccaaggcggcgggcatggcggacggcagctacacc 260 |||||||||||||| || || |||||||| || ||||||| | | |||||||||||| Sbjct: 120611 gacttcctcaaggcgtcgcgcgccgccaaggccgccggcatggagaagggcagctacacc 120552 Query: 261 gtcatgcacctcgacctcgcctccctcgacagcgtccggcagttcgt 307 || | ||||||||||| || || |||||||||||| |||||||||| Sbjct: 120551 atcgtccacctcgacctggcgtcgctcgacagcgtcaggcagttcgt 120505 Score = 56.0 bits (28), Expect = 1e-04 Identities = 78/92 (84%), Gaps = 2/92 (2%) Strand = Plus / Minus Query: 346 tggtgtgcaacgccgccatctaccggcccacggcgc-gcacgccgaccttcaccgccgac 404 ||||||||||||||||| | |||| |||||| || ||| ||||| ||||||||||||| Sbjct: 120466 tggtgtgcaacgccgccgtgtaccagcccaccgccaagca-gccgagcttcaccgccgac 120408 Query: 405 gggcacgagatgagcgtgggcgtgaaccacct 436 || |||||||||||| ||||| |||||||| Sbjct: 120407 ggcttcgagatgagcgtcggcgtcaaccacct 120376
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 180 bits (91), Expect = 3e-42 Identities = 193/227 (85%) Strand = Plus / Plus Query: 81 ggcaagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggc 140 |||||| |||||||||| ||||| || ||| ||||| |||||||| |||||||| ||| Sbjct: 18385962 ggcaagcagacgctgcgcaagggcacggcggtcatcaccggcgcgtcgtccgggcttggc 18386021 Query: 141 ctggcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgc 200 || ||| |||| ||||||||||| |||||||||| ||||||||||||||||| ||||||| Sbjct: 18386022 ctcgcgacggcgaaggcgctggcggagacgggcaggtggcacgtcgtcatggggtgccgc 18386081 Query: 201 gacttcctcaaggcctccaaggcggccaaggcggcgggcatggcggacggcagctacacc 260 |||||||||||||| || || |||||||| || ||||||| | | |||||||||||| Sbjct: 18386082 gacttcctcaaggcgtcgcgcgccgccaaggccgccggcatggagaagggcagctacacc 18386141 Query: 261 gtcatgcacctcgacctcgcctccctcgacagcgtccggcagttcgt 307 || | ||||||||||| || || |||||||||||| |||||||||| Sbjct: 18386142 atcgtccacctcgacctggcgtcgctcgacagcgtcaggcagttcgt 18386188 Score = 56.0 bits (28), Expect = 1e-04 Identities = 78/92 (84%), Gaps = 2/92 (2%) Strand = Plus / Plus Query: 346 tggtgtgcaacgccgccatctaccggcccacggcgc-gcacgccgaccttcaccgccgac 404 ||||||||||||||||| | |||| |||||| || ||| ||||| ||||||||||||| Sbjct: 18386227 tggtgtgcaacgccgccgtgtaccagcccaccgccaagca-gccgagcttcaccgccgac 18386285 Query: 405 gggcacgagatgagcgtgggcgtgaaccacct 436 || |||||||||||| ||||| |||||||| Sbjct: 18386286 ggcttcgagatgagcgtcggcgtcaaccacct 18386317
>dbj|AK068143.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134C06, full insert sequence Length = 2944 Score = 180 bits (91), Expect = 3e-42 Identities = 193/227 (85%) Strand = Plus / Plus Query: 81 ggcaagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggc 140 |||||| |||||||||| ||||| || ||| ||||| |||||||| |||||||| ||| Sbjct: 1506 ggcaagcagacgctgcgcaagggcacggcggtcatcaccggcgcgtcgtccgggcttggc 1565 Query: 141 ctggcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgc 200 || ||| |||| ||||||||||| |||||||||| ||||||||||||||||| ||||||| Sbjct: 1566 ctcgcgacggcgaaggcgctggcggagacgggcaggtggcacgtcgtcatggggtgccgc 1625 Query: 201 gacttcctcaaggcctccaaggcggccaaggcggcgggcatggcggacggcagctacacc 260 |||||||||||||| || || |||||||| || ||||||| | | |||||||||||| Sbjct: 1626 gacttcctcaaggcgtcgcgcgccgccaaggccgccggcatggagaagggcagctacacc 1685 Query: 261 gtcatgcacctcgacctcgcctccctcgacagcgtccggcagttcgt 307 || | ||||||||||| || || |||||||||||| |||||||||| Sbjct: 1686 atcgtccacctcgacctggcgtcgctcgacagcgtcaggcagttcgt 1732 Score = 56.0 bits (28), Expect = 1e-04 Identities = 78/92 (84%), Gaps = 2/92 (2%) Strand = Plus / Plus Query: 346 tggtgtgcaacgccgccatctaccggcccacggcgc-gcacgccgaccttcaccgccgac 404 ||||||||||||||||| | |||| |||||| || ||| ||||| ||||||||||||| Sbjct: 1771 tggtgtgcaacgccgccgtgtaccagcccaccgccaagca-gccgagcttcaccgccgac 1829 Query: 405 gggcacgagatgagcgtgggcgtgaaccacct 436 || |||||||||||| ||||| |||||||| Sbjct: 1830 ggcttcgagatgagcgtcggcgtcaaccacct 1861
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 180 bits (91), Expect = 3e-42 Identities = 193/227 (85%) Strand = Plus / Plus Query: 81 ggcaagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggc 140 |||||| |||||||||| ||||| || ||| ||||| |||||||| |||||||| ||| Sbjct: 18396015 ggcaagcagacgctgcgcaagggcacggcggtcatcaccggcgcgtcgtccgggcttggc 18396074 Query: 141 ctggcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgc 200 || ||| |||| ||||||||||| |||||||||| ||||||||||||||||| ||||||| Sbjct: 18396075 ctcgcgacggcgaaggcgctggcggagacgggcaggtggcacgtcgtcatggggtgccgc 18396134 Query: 201 gacttcctcaaggcctccaaggcggccaaggcggcgggcatggcggacggcagctacacc 260 |||||||||||||| || || |||||||| || ||||||| | | |||||||||||| Sbjct: 18396135 gacttcctcaaggcgtcgcgcgccgccaaggccgccggcatggagaagggcagctacacc 18396194 Query: 261 gtcatgcacctcgacctcgcctccctcgacagcgtccggcagttcgt 307 || | ||||||||||| || || |||||||||||| |||||||||| Sbjct: 18396195 atcgtccacctcgacctggcgtcgctcgacagcgtcaggcagttcgt 18396241 Score = 56.0 bits (28), Expect = 1e-04 Identities = 78/92 (84%), Gaps = 2/92 (2%) Strand = Plus / Plus Query: 346 tggtgtgcaacgccgccatctaccggcccacggcgc-gcacgccgaccttcaccgccgac 404 ||||||||||||||||| | |||| |||||| || ||| ||||| ||||||||||||| Sbjct: 18396280 tggtgtgcaacgccgccgtgtaccagcccaccgccaagca-gccgagcttcaccgccgac 18396338 Query: 405 gggcacgagatgagcgtgggcgtgaaccacct 436 || |||||||||||| ||||| |||||||| Sbjct: 18396339 ggcttcgagatgagcgtcggcgtcaaccacct 18396370
>gb|AY862405.1| Musa acuminata NADPH-protochlorophyllide oxidoreductase gene, complete cds Length = 1619 Score = 161 bits (81), Expect = 2e-36 Identities = 279/345 (80%) Strand = Plus / Plus Query: 92 gctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggcctggcggcggc 151 ||||||| ||||||||||||| ||||| ||||| || || || || ||||| || || || Sbjct: 423 gctgcggaagggcgtggtggtaatcaccggcgcctcctcgggactcggcctcgccgctgc 482 Query: 152 caaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctcaa 211 |||||| || |||||||| | || |||||||| |||||||| ||| | ||||||||||| Sbjct: 483 caaggctctcgccgagaccgagaaatggcacgttgtcatggcctgcagggacttcctcaa 542 Query: 212 ggcctccaaggcggccaaggcggcgggcatggcggacggcagctacaccgtcatgcacct 271 |||| ||||| || || |||| |||||||| | | | |||| || |||||||||| Sbjct: 543 ggccgagaaggccgcgcagtcggccggcatggccaaggagaactactccatcatgcacct 602 Query: 272 cgacctcgcctccctcgacagcgtccggcagttcgttgacgcgttccgccgcgccgagat 331 |||||||| || ||||||||||| ||||||||||| | || ||||| | ||| || Sbjct: 603 ggacctcgcatcgctcgacagcgtgcggcagttcgtccatgccttccggcagtccgggag 662 Query: 332 gccgctggatgtgctggtgtgcaacgccgccatctaccggcccacggcgcgcacgccgac 391 ||| || || ||||| |||||||| || || |||||||||||||| || ||||||||||| Sbjct: 663 gcccctcgacgtgctcgtgtgcaatgcggcgatctaccggcccaccgcccgcacgccgac 722 Query: 392 cttcaccgccgacgggcacgagatgagcgtgggcgtgaaccacct 436 | ||| ||||||||| ||||||||||||| ||||| |||||||| Sbjct: 723 gtacacggccgacgggtacgagatgagcgtcggcgtcaaccacct 767
>emb|AJ567760.1|ZMA567760 Zea mays partial mRNA for NADPH-protochlorophyllide oxidoreductase (por gene) Length = 1116 Score = 157 bits (79), Expect = 4e-35 Identities = 190/227 (83%) Strand = Plus / Plus Query: 81 ggcaagaagacgctgcggcagggcgtggtggtgatcacgggcgcgtcatccgggctgggc 140 ||||||||||| || || ||||| || ||| ||||| |||||||| ||||| || ||| Sbjct: 154 ggcaagaagaccctccgcaagggcacggcggtcatcaccggcgcgtcgtccggcctcggc 213 Query: 141 ctggcggcggccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgc 200 || || |||| ||||| ||||| ||||| ||||||||||||||| ||||||| |||||| Sbjct: 214 ctcgccacggcgaaggccctggcggagacaggcaagtggcacgtcatcatggcctgccgc 273 Query: 201 gacttcctcaaggcctccaaggcggccaaggcggcgggcatggcggacggcagctacacc 260 |||||||||||||| || |||||||||||||| ||||||| | | ||||| |||| Sbjct: 274 gacttcctcaaggcgtcgcgcgcggccaaggcggccggcatggacaaggacagcttcacc 333 Query: 261 gtcatgcacctcgacctcgcctccctcgacagcgtccggcagttcgt 307 ||| ||||||| |||||||||||||| ||||||||||| |||||||| Sbjct: 334 gtcgtgcacctggacctcgcctccctggacagcgtccgccagttcgt 380 Score = 46.1 bits (23), Expect = 0.095 Identities = 44/51 (86%) Strand = Plus / Plus Query: 386 gccgaccttcaccgccgacgggcacgagatgagcgtgggcgtgaaccacct 436 |||| ||| |||||||||||| |||||||||||| ||||| |||||||| Sbjct: 459 gccgtcctacaccgccgacggcttcgagatgagcgtcggcgtcaaccacct 509
>gb|AY103784.1| Zea mays PCO066646 mRNA sequence Length = 1664 Score = 143 bits (72), Expect = 5e-31 Identities = 159/188 (84%) Strand = Plus / Plus Query: 120 ggcgcgtcatccgggctgggcctggcggcggccaaggcgctggccgagacgggcaagtgg 179 |||||||| ||||| || |||||||| |||| ||||| ||||| ||||| ||||||||| Sbjct: 375 ggcgcgtcgtccggcctcggcctggccacggcgaaggccctggcggagaccggcaagtgg 434 Query: 180 cacgtcgtcatggcgtgccgcgacttcctcaaggcctccaaggcggccaaggcggcgggc 239 |||||| ||||||| |||||||| || |||||||| || |||||||| ||||| ||| Sbjct: 435 cacgtcatcatggcctgccgcgattttctcaaggcgtcgcgcgcggccaaagcggccggc 494 Query: 240 atggcggacggcagctacaccgtcatgcacctcgacctcgcctccctcgacagcgtccgg 299 |||| | | ||||| ||||||| ||||||| |||||||||||||||||||||||||| Sbjct: 495 atggacaaggacagcttcaccgtcgtgcacctggacctcgcctccctcgacagcgtccgc 554 Query: 300 cagttcgt 307 |||||||| Sbjct: 555 cagttcgt 562 Score = 46.1 bits (23), Expect = 0.095 Identities = 44/51 (86%) Strand = Plus / Plus Query: 386 gccgaccttcaccgccgacgggcacgagatgagcgtgggcgtgaaccacct 436 |||| ||| |||||||||||| |||||||||||| ||||| |||||||| Sbjct: 641 gccgtcctacaccgccgacggcttcgagatgagcgtcggcgtcaaccacct 691
>emb|X84738.1|HVNADPHPO H.vulgare mRNA for NADPH-protochlorophyllide oxidoreductase Length = 1345 Score = 139 bits (70), Expect = 9e-30 Identities = 163/194 (84%) Strand = Plus / Plus Query: 114 atcacgggcgcgtcatccgggctgggcctggcggcggccaaggcgctggccgagacgggc 173 |||||||||||||| || || || ||||| || |||||||||| ||||| ||| | ||| Sbjct: 313 atcacgggcgcgtcgtcgggcctcggcctcgccacggccaaggccctggcggagtcaggc 372 Query: 174 aagtggcacgtcgtcatggcgtgccgcgacttcctcaaggcctccaaggcggccaaggcg 233 |||||||||||| |||||||||||||||||| ||||||| || | ||||||| |||| Sbjct: 373 aagtggcacgtcatcatggcgtgccgcgactacctcaagaccgcgcgcgcggccagggcg 432 Query: 234 gcgggcatggcggacggcagctacaccgtcatgcacctcgacctcgcctccctcgacagc 293 || |||||| | | |||||||||||| || ||||||| || || ||||||||||||||| Sbjct: 433 gccggcatgcccaagggcagctacaccatcgtgcaccttgatctggcctccctcgacagc 492 Query: 294 gtccggcagttcgt 307 ||||| |||||||| Sbjct: 493 gtccgccagttcgt 506 Score = 44.1 bits (22), Expect = 0.38 Identities = 40/46 (86%) Strand = Plus / Plus Query: 391 ccttcaccgccgacgggcacgagatgagcgtgggcgtgaaccacct 436 |||||||||| ||||| |||||||||||| ||||| |||||||| Sbjct: 590 ccttcaccgcggacggcttcgagatgagcgtcggcgtcaaccacct 635
>gb|AY106314.1| Zea mays PCO151862 mRNA sequence Length = 1009 Score = 69.9 bits (35), Expect = 7e-09 Identities = 47/51 (92%) Strand = Plus / Plus Query: 251 cagctacaccgtcatgcacctcgacctcgcctccctcgacagcgtccggca 301 |||||||||| |||||||||| ||||| ||||||||||||||||| ||||| Sbjct: 22 cagctacaccatcatgcacctggacctggcctccctcgacagcgtgcggca 72 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 384 acgccgaccttcaccgccgacgggcacgagatgagcgtgggcgtgaaccacctg 437 |||||||| ||||| || ||||| ||||||||||||| ||||| ||||||||| Sbjct: 76 acgccgacgttcacggcggacggatacgagatgagcgtcggcgtcaaccacctg 129
>gb|U36752.1|CRU36752 Chlamydomonas reinhardtii NADPH:protochlorophyllide oxidoreductase (lpcr-1) gene, nuclear gene encoding chloroplast protein, complete cds Length = 4101 Score = 67.9 bits (34), Expect = 3e-08 Identities = 58/66 (87%) Strand = Plus / Plus Query: 150 gccaaggcgctggccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctc 209 |||||||| ||||||| || ||| |||||||||| |||||||| ||||| ||||||||| Sbjct: 1511 gccaaggccctggccgccaccggcgagtggcacgtggtcatggcctgccgtgacttcctc 1570 Query: 210 aaggcc 215 |||||| Sbjct: 1571 aaggcc 1576 Score = 42.1 bits (21), Expect = 1.5 Identities = 36/41 (87%) Strand = Plus / Plus Query: 336 ctggatgtgctggtgtgcaacgccgccatctaccggcccac 376 ||||||| ||||||||||||||| ||| | |||| |||||| Sbjct: 1697 ctggatgcgctggtgtgcaacgctgccgtgtacctgcccac 1737
>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome Length = 2932766 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 336 ctggatgtgctggtgtgcaacgccgccatctac 368 ||||||| |||||||||||||||||||||||| Sbjct: 2392719 ctggatgccctggtgtgcaacgccgccatctac 2392751
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Plus Query: 142 tggcggcggccaaggcgctggccg 165 |||||||||||||||||||||||| Sbjct: 5142952 tggcggcggccaaggcgctggccg 5142975
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 46.1 bits (23), Expect = 0.095 Identities = 23/23 (100%) Strand = Plus / Minus Query: 224 ggccaaggcggcgggcatggcgg 246 ||||||||||||||||||||||| Sbjct: 3189668 ggccaaggcggcgggcatggcgg 3189646 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 ggcggccaaggcggcgggcat 241 ||||||||||||||||||||| Sbjct: 3239309 ggcggccaaggcggcgggcat 3239329 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 221 ggcggccaaggcggcgggcatggc 244 ||||||||||||||||||| |||| Sbjct: 4342958 ggcggccaaggcggcgggcgtggc 4342935
>gb|AF223646.1| Uncultured bacterium plasmid pAH115 esterase gene, complete cds Length = 2142 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 57 ggctcgaccgcgtcgtcgccga 78 |||||||||||||||||||||| Sbjct: 140 ggctcgaccgcgtcgtcgccga 119
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 318 cgccgcgccgagatgccgctggatgtgctg 347 |||||||||| |||||||||||| |||||| Sbjct: 5300 cgccgcgccgtgatgccgctggaggtgctg 5329
>gb|AC090433.10| Chlamydomonas reinhardtii clone cr-19b23, complete sequence Length = 118183 Score = 44.1 bits (22), Expect = 0.38 Identities = 28/30 (93%) Strand = Plus / Plus Query: 318 cgccgcgccgagatgccgctggatgtgctg 347 |||||||||| |||||||||||| |||||| Sbjct: 65282 cgccgcgccgtgatgccgctggaggtgctg 65311
>gb|AF265661.1|AF265661 Oryctolagus cuniculus 17-beta-hydroxysteroid dehydrogenase type 1 (HSD17B1) mRNA, partial cds Length = 424 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 337 tggatgtgctggtgtgcaacgc 358 |||||||||||||||||||||| Sbjct: 74 tggatgtgctggtgtgcaacgc 95
>gb|AF162207.1|AF162207 Lactuca sativa NADPH-protochlorophyllide oxidoreductase mRNA, partial sequence; nuclear gene for chloroplast product Length = 926 Score = 44.1 bits (22), Expect = 0.38 Identities = 37/42 (88%) Strand = Plus / Plus Query: 254 ctacaccgtcatgcacctcgacctcgcctccctcgacagcgt 295 ||||||||| |||||||||||||| | |||||||| ||||| Sbjct: 538 ctacaccgttatgcacctcgacctttcttccctcgaaagcgt 579
>ref|NM_124799.2| Arabidopsis thaliana PORA; oxidoreductase/ protochlorophyllide reductase AT5G54190 (PORA) transcript variant AT5G54190.1 mRNA, complete cds Length = 1430 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 162 gccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctcaaggc 214 |||||||| || || |||||||| | ||||||||| | |||||||||||||| Sbjct: 375 gccgagacaggtaaatggcacgtgataatggcgtgcagagacttcctcaaggc 427
>ref|NM_001036995.1| Arabidopsis thaliana PORA; oxidoreductase/ protochlorophyllide reductase AT5G54190 (PORA) transcript variant AT5G54190.2 mRNA, complete cds Length = 1610 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 162 gccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctcaaggc 214 |||||||| || || |||||||| | ||||||||| | |||||||||||||| Sbjct: 458 gccgagacaggtaaatggcacgtgataatggcgtgcagagacttcctcaaggc 510
>gb|DQ213273.1| Taeniopygia guttata clone 0061P0015F05 HSPC023 protein-like mRNA, complete sequence Length = 422 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 217 ccaaggcggccaaggcggcgg 237 ||||||||||||||||||||| Sbjct: 66 ccaaggcggccaaggcggcgg 86
>emb|BX572101.1| Prochlorococcus marinus MIT9313 complete genome; segment 7/7 Length = 318136 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 327 gagatgccgctggatgtgctg 347 ||||||||||||||||||||| Sbjct: 129943 gagatgccgctggatgtgctg 129963
>gb|AE005920.1| Caulobacter crescentus CB15 section 246 of 359 of the complete genome Length = 10062 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 137 gggcctggcggcggccaaggcgctg 161 |||||||||||||| |||||||||| Sbjct: 7333 gggcctggcggcggtcaaggcgctg 7309
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 142 tggcggcggccaaggcgctggccga 166 ||||||| ||||||||||||||||| Sbjct: 4597581 tggcggcagccaaggcgctggccga 4597605
>emb|BX831431.1|CNS0A0QN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS8ZF04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1364 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 162 gccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctcaaggc 214 |||||||| || || |||||||| | ||||||||| | |||||||||||||| Sbjct: 345 gccgagacaggtaaatggcacgtgataatggcgtgcagagacttcctcaaggc 397
>emb|BX830661.1|CNS09YSL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS12ZA01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1327 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 162 gccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctcaaggc 214 |||||||| || || |||||||| | ||||||||| | |||||||||||||| Sbjct: 325 gccgagacaggtaaatggcacgtgataatggcgtgcagagacttcctcaaggc 377
>gb|BT005080.1| Arabidopsis thaliana clone U20856 putative NADPH:protochlorophyllide oxidoreductase A (At5g54190) mRNA, complete cds Length = 1249 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 162 gccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctcaaggc 214 |||||||| || || |||||||| | ||||||||| | |||||||||||||| Sbjct: 337 gccgagacaggtaaatggcacgtgataatggcgtgcagagacttcctcaaggc 389
>gb|BT003853.1| Arabidopsis thaliana clone RAFL16-02-F18 (R20856) putative NADPH:protochlorophyllide oxidoreductase A (At5g54190) mRNA, complete cds Length = 1446 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 162 gccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctcaaggc 214 |||||||| || || |||||||| | ||||||||| | |||||||||||||| Sbjct: 375 gccgagacaggtaaatggcacgtgataatggcgtgcagagacttcctcaaggc 427
>gb|AE005001.1| Halobacterium sp. NRC-1 section 32 of 170 of the complete genome Length = 10670 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 gcacgtcgtcatggcgtgccg 199 ||||||||||||||||||||| Sbjct: 6496 gcacgtcgtcatggcgtgccg 6476
>dbj|AB013387.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K18G13 Length = 31309 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Minus Query: 162 gccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctcaaggc 214 |||||||| || || |||||||| | ||||||||| | |||||||||||||| Sbjct: 26336 gccgagacaggtaaatggcacgtgataatggcgtgcagagacttcctcaaggc 26284
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 149 ggccaaggcgctggccgagac 169 ||||||||||||||||||||| Sbjct: 3414909 ggccaaggcgctggccgagac 3414929 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 tgccgctggatgtgctggtg 350 |||||||||||||||||||| Sbjct: 709928 tgccgctggatgtgctggtg 709947
>gb|AY260760.3| Streptomyces hygroscopicus subsp. yingchengensis Shy1 (shy1), CvhE (cvhE), CvhD (cvhD), CvhC (cvhC), CvhB (cvhB), CvhA (cvhA), Shy26 (shy26), Shy4 (shy4), Shy5 (shy5), Shy6 (shy6), Shy7 (shy7), Shy8 (shy8), Shy9 (shy9), Shy10 (shy10), Shy11 (shy11), Shy12 (shy12), Shy13 (shy13), Shy14 (shy14), Shy15 (shy15), Shy16 (shy16), Shy17 (shy17), Shy18 (shy18), Hmr19 (hmr19), Shy20 (shy20), Shy21 (shy21), Shy22 (shy22), Shy23 (shy23), Shy24 (shy24), and Shy25 (shy25) genes, complete cds Length = 36687 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 134 gctgggcctggcggcggccaa 154 ||||||||||||||||||||| Sbjct: 2550 gctgggcctggcggcggccaa 2530
>gb|U29699.1|ATU29699 Arabidopsis thaliana light-dependent NADPH:protochlorophyllide oxidoreductase A (PorA) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1218 Score = 42.1 bits (21), Expect = 1.5 Identities = 45/53 (84%) Strand = Plus / Plus Query: 162 gccgagacgggcaagtggcacgtcgtcatggcgtgccgcgacttcctcaaggc 214 |||||||| || || |||||||| | ||||||||| | |||||||||||||| Sbjct: 337 gccgagacaggtaaatggcacgtgataatggcgtgcagagacttcctcaaggc 389
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 212 ggcctccaaggcggccaaggc 232 ||||||||||||||||||||| Sbjct: 1187506 ggcctccaaggcggccaaggc 1187526
>dbj|AB050124.1| Amaranthus tricolor POR2 mRNA for NADPH-protochlorophyllide oxidoreductase 2, partial cds Length = 674 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 252 agctacaccgtcatgcacctcgacctcgcctcc 284 ||||||||||||||||| || ||||| |||||| Sbjct: 79 agctacaccgtcatgcatcttgaccttgcctcc 111
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 agatgccgctggatgtgctg 347 |||||||||||||||||||| Sbjct: 186650 agatgccgctggatgtgctg 186631
>gb|AC121363.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0036C12, complete sequence Length = 145517 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 142 tggcggcggccaaggcgctggccg 165 ||||||||||||||||| |||||| Sbjct: 62502 tggcggcggccaaggcggtggccg 62525
>gb|AC104711.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1320_D10, complete sequence Length = 134183 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ctcgaccgcgtcgtcgccga 78 |||||||||||||||||||| Sbjct: 50427 ctcgaccgcgtcgtcgccga 50446
>gb|AC162446.2| Mus musculus chromosome 8, clone RP23-410L16, complete sequence Length = 197906 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 92 gctgcggcagggcgtggtgg 111 |||||||||||||||||||| Sbjct: 132507 gctgcggcagggcgtggtgg 132526
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 gcggccaaggcgctggccga 166 |||||||||||||||||||| Sbjct: 2105778 gcggccaaggcgctggccga 2105797
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 cgcctccctcgacagcgtcc 297 |||||||||||||||||||| Sbjct: 647435 cgcctccctcgacagcgtcc 647454
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 245 ggacggcagctacaccgtca 264 |||||||||||||||||||| Sbjct: 1387699 ggacggcagctacaccgtca 1387718
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 323 cgccgagatgccgctggatgtgctggtg 350 ||||||||||||||||| ||||||||| Sbjct: 2911784 cgccgagatgccgctggcggtgctggtg 2911811
>gb|AE009252.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 22 of 187 of the complete sequence Length = 14499 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 218 caaggcggccaaggcggcgggcat 241 ||||||||||| |||||||||||| Sbjct: 13654 caaggcggccagggcggcgggcat 13631
>gb|AE008361.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 165 of 187 of the complete sequence Length = 12142 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 218 caaggcggccaaggcggcgggcat 241 ||||||||||| |||||||||||| Sbjct: 932 caaggcggccagggcggcgggcat 955
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 331 tgccgctggatgtgctggtg 350 |||||||||||||||||||| Sbjct: 785648 tgccgctggatgtgctggtg 785667
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 177 tggcacgtcgtcatggcgtgccgc 200 ||||||||||||||||| |||||| Sbjct: 373356 tggcacgtcgtcatggcttgccgc 373379
>ref|XM_982866.1| PREDICTED: Mus musculus microtubule associated serine/threonine kinase 3, transcript variant 2 (Mast3), mRNA Length = 4425 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 gctgcggcagggcgtggtgg 111 |||||||||||||||||||| Sbjct: 3427 gctgcggcagggcgtggtgg 3408
>ref|XM_888290.2| PREDICTED: Mus musculus microtubule associated serine/threonine kinase 3, transcript variant 2 (Mast3), mRNA Length = 4425 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 gctgcggcagggcgtggtgg 111 |||||||||||||||||||| Sbjct: 3427 gctgcggcagggcgtggtgg 3408
>ref|XM_979773.1| PREDICTED: Mus musculus microtubule associated serine/threonine kinase 3 (Mast3), mRNA Length = 4425 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 gctgcggcagggcgtggtgg 111 |||||||||||||||||||| Sbjct: 3427 gctgcggcagggcgtggtgg 3408
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gcagggcgtggtggtgatca 117 |||||||||||||||||||| Sbjct: 4141015 gcagggcgtggtggtgatca 4141034
>ref|XM_749937.1| Aspergillus fumigatus Af293 nicotinate-nucleotide pyrophosphorylase (Afu3g05730) partial mRNA Length = 942 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 aggcggccaaggcggcgggc 239 |||||||||||||||||||| Sbjct: 620 aggcggccaaggcggcgggc 639
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 ggctgggcctggcggcggcc 152 |||||||||||||||||||| Sbjct: 1077017 ggctgggcctggcggcggcc 1077036
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 ggcggcggccaaggcgctgg 162 |||||||||||||||||||| Sbjct: 1942139 ggcggcggccaaggcgctgg 1942158
>gb|AC011598.33| Homo sapiens 12 BAC RP11-778N14 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 171787 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 gctggatgtgctggtgtgca 354 |||||||||||||||||||| Sbjct: 72714 gctggatgtgctggtgtgca 72733
>emb|X99258.1|MTMOB M.tuberculosis genomic sequence containing 4 ORF's Length = 4082 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 gcggccaaggcgctggccga 166 |||||||||||||||||||| Sbjct: 3778 gcggccaaggcgctggccga 3797
>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13 Length = 346186 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 gcggccaaggcgctggccga 166 |||||||||||||||||||| Sbjct: 29855 gcggccaaggcgctggccga 29874
>emb|BX640440.1| Bordetella bronchiseptica strain RB50, complete genome; segment 4/16 Length = 349497 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 aggcggcgggcatggcggac 248 |||||||||||||||||||| Sbjct: 311086 aggcggcgggcatggcggac 311105 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 383 cacgccgaccttcaccgccgacgg 406 ||||| |||||||||||||||||| Sbjct: 236028 cacgctgaccttcaccgccgacgg 236005 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 383 cacgccgaccttcaccgccgacgg 406 ||||| |||||||||||||||||| Sbjct: 234714 cacgctgaccttcaccgccgacgg 234691 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 383 cacgccgaccttcaccgccgacgg 406 ||||| |||||||||||||||||| Sbjct: 232743 cacgctgaccttcaccgccgacgg 232720 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 383 cacgccgaccttcaccgccgacgg 406 ||||| |||||||||||||||||| Sbjct: 232086 cacgctgaccttcaccgccgacgg 232063
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 aggcggcgggcatggcggac 248 |||||||||||||||||||| Sbjct: 74877 aggcggcgggcatggcggac 74896 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 383 cacgccgaccttcaccgccgacgg 406 ||||| |||||||||||||||||| Sbjct: 5753 cacgctgaccttcaccgccgacgg 5730 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 383 cacgccgaccttcaccgccgacgg 406 ||||| |||||||||||||||||| Sbjct: 4445 cacgctgaccttcaccgccgacgg 4422
>emb|BX248340.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 7/14 Length = 291050 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 gcggccaaggcgctggccga 166 |||||||||||||||||||| Sbjct: 184766 gcggccaaggcgctggccga 184785
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 141 ctggcggcggccaaggcgctggcc 164 |||||||||||| ||||||||||| Sbjct: 40231 ctggcggcggccgaggcgctggcc 40254
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 gcctccaaggcggccaaggc 232 |||||||||||||||||||| Sbjct: 51320 gcctccaaggcggccaaggc 51339
>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29 Length = 276800 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 gctgggcctggcggcggcca 153 |||||||||||||||||||| Sbjct: 107449 gctgggcctggcggcggcca 107468
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 152 caaggcgctggccgagacgggcaa 175 |||||||||||||||||| ||||| Sbjct: 171756 caaggcgctggccgagaccggcaa 171779
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 gcagggcgtggtggtgatca 117 |||||||||||||||||||| Sbjct: 1108145 gcagggcgtggtggtgatca 1108126
>gb|AE011995.1| Xanthomonas axonopodis pv. citri str. 306, section 373 of 469 of the complete genome Length = 11692 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gcagggcgtggtggtgatca 117 |||||||||||||||||||| Sbjct: 3837 gcagggcgtggtggtgatca 3856
>gb|AE012533.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 441 of 460 of the complete genome Length = 6066 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 gcggcggccaaggcgctggc 163 |||||||||||||||||||| Sbjct: 5752 gcggcggccaaggcgctggc 5771
>gb|AE012453.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 361 of 460 of the complete genome Length = 10452 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 98 gcagggcgtggtggtgatca 117 |||||||||||||||||||| Sbjct: 3550 gcagggcgtggtggtgatca 3569
>gb|AC078911.11| Mus musculus Strain C57BL6/J Chromosome 2 RP23-111A22, complete sequence Length = 200329 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 gctggatgtgctggtgtgca 354 |||||||||||||||||||| Sbjct: 68186 gctggatgtgctggtgtgca 68205
>dbj|AK140821.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130034L06 product:weakly similar to Sast-pending protein [Mus musculus], full insert sequence Length = 4263 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 gctgcggcagggcgtggtgg 111 |||||||||||||||||||| Sbjct: 3507 gctgcggcagggcgtggtgg 3488
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 311 cgcgttccgccgcgccgaga 330 |||||||||||||||||||| Sbjct: 720274 cgcgttccgccgcgccgaga 720293
>gb|DQ384244.1| Olyra latifolia tasselseed2-like short-chain dehydrogenase/reductase gene, partial cds Length = 759 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 23 ggccacggcgccttcgccggtgacgacg 50 ||||||| ||||||||||| |||||||| Sbjct: 565 ggccacgacgccttcgccgctgacgacg 592
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 gcggcggccaaggcgctggc 163 |||||||||||||||||||| Sbjct: 4949256 gcggcggccaaggcgctggc 4949275 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 gcagggcgtggtggtgatca 117 |||||||||||||||||||| Sbjct: 978778 gcagggcgtggtggtgatca 978759
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 142 tggcggcggccaaggcgctggccg 165 ||||||||||||||||| |||||| Sbjct: 5664502 tggcggcggccaaggcggtggccg 5664479
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 142 tggcggcggccaaggcgctggccg 165 ||||||||||||||||| |||||| Sbjct: 16738392 tggcggcggccaaggcggtggccg 16738415 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ctcgaccgcgtcgtcgccga 78 |||||||||||||||||||| Sbjct: 16551688 ctcgaccgcgtcgtcgccga 16551707
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome Length = 3304561 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 cgccttcgccggtgacgacg 50 |||||||||||||||||||| Sbjct: 2286225 cgccttcgccggtgacgacg 2286244
>gb|AF329478.1|AF329478 Arthrobacter sp. 1IN sarcosine oxidase operon, partial sequence Length = 5855 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 374 cacggcgcgcacgccgacct 393 |||||||||||||||||||| Sbjct: 4594 cacggcgcgcacgccgacct 4575
>dbj|D50085.1| Cucumis sativus mRNA for NADPH-protochlorophyllide oxidoreductase, complete cds Length = 1408 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 332 gccgctggatgtgctggtgtgcaa 355 |||||| ||||||||||||||||| Sbjct: 529 gccgcttgatgtgctggtgtgcaa 552
>gb|AC018737.9| Homo sapiens BAC clone RP11-416H1 from 2, complete sequence Length = 206454 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 gctggatgtgctggtgtgca 354 |||||||||||||||||||| Sbjct: 35980 gctggatgtgctggtgtgca 35999
>gb|AF350004.1| Bacteriophage N4 late gene region, partial sequence Length = 17432 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 tgagcgtgggcgtgaaccac 434 |||||||||||||||||||| Sbjct: 16778 tgagcgtgggcgtgaaccac 16797
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 cgaccgcgtcgtcgccgagc 80 |||||||||||||||||||| Sbjct: 1012168 cgaccgcgtcgtcgccgagc 1012187
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 177 tggcacgtcgtcatggcgtgccgc 200 ||||||||||||||||| |||||| Sbjct: 2097905 tggcacgtcgtcatggcttgccgc 2097882
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ctcgaccgcgtcgtcgccga 78 |||||||||||||||||||| Sbjct: 2286263 ctcgaccgcgtcgtcgccga 2286282 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 59 ctcgaccgcgtcgtcgccga 78 |||||||||||||||||||| Sbjct: 1600910 ctcgaccgcgtcgtcgccga 1600929
>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021C04 Length = 162115 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 142 tggcggcggccaaggcgctggccg 165 ||||||||||||||||| |||||| Sbjct: 56649 tggcggcggccaaggcggtggccg 56626
>dbj|AK172971.1| Mus musculus mRNA for mKIAA0561 protein Length = 1425 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 gctgcggcagggcgtggtgg 111 |||||||||||||||||||| Sbjct: 703 gctgcggcagggcgtggtgg 684
>gb|AE005112.1| Halobacterium sp. NRC-1 section 143 of 170 of the complete genome Length = 12204 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 cgaccgcgtcgtcgccgagc 80 |||||||||||||||||||| Sbjct: 5711 cgaccgcgtcgtcgccgagc 5692
>emb|X80268.1|MY4547 M.tuberculosis 45/47 gene Length = 2061 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 gcggccaaggcgctggccga 166 |||||||||||||||||||| Sbjct: 1904 gcggccaaggcgctggccga 1923
>ref|XM_320381.2| Anopheles gambiae str. PEST ENSANGP00000013940 (ENSANGG00000011451), partial mRNA Length = 1272 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 336 ctggatgtgctggtgtgcaa 355 |||||||||||||||||||| Sbjct: 709 ctggatgtgctggtgtgcaa 728
>dbj|AK107409.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-E07, full insert sequence Length = 2780 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 aggcggccaaggcggcgggc 239 |||||||||||||||||||| Sbjct: 1447 aggcggccaaggcggcgggc 1466
>gb|AF013569.1|AF013569 Mycobacterium bovis fibronectin attachment protein (FAP-B) gene, complete cds Length = 1123 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 147 gcggccaaggcgctggccga 166 |||||||||||||||||||| Sbjct: 901 gcggccaaggcgctggccga 920
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 gctcgaccgcgtcgtcgccgagcg 81 ||||||||| |||||||||||||| Sbjct: 1756600 gctcgaccgggtcgtcgccgagcg 1756623
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 gcacgccgaccttcaccgcc 401 |||||||||||||||||||| Sbjct: 2045892 gcacgccgaccttcaccgcc 2045873 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 336 ctggatgtgctggtgtgcaacgccgccatcta 367 ||||||| ||||||||||||||| | |||||| Sbjct: 555425 ctggatgcgctggtgtgcaacgcgggcatcta 555394
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 gcagggcgtggtggtgatca 117 |||||||||||||||||||| Sbjct: 1141678 gcagggcgtggtggtgatca 1141659
>gb|BC024265.1| Mus musculus microtubule associated serine/threonine kinase 3, mRNA (cDNA clone IMAGE:5137303), complete cds Length = 3042 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 gctgcggcagggcgtggtgg 111 |||||||||||||||||||| Sbjct: 1139 gctgcggcagggcgtggtgg 1120
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 ggcctggcggcggccaaggcgctg 161 ||||||| |||||||||||||||| Sbjct: 4462203 ggcctggtggcggccaaggcgctg 4462180 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 331 tgccgctggatgtgctggtg 350 |||||||||||||||||||| Sbjct: 4406940 tgccgctggatgtgctggtg 4406921
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 ggcggccaaggcggcgggca 240 |||||||||||||||||||| Sbjct: 1266223 ggcggccaaggcggcgggca 1266242
>gb|AY128691.1| Synthetic construct N-terminal his-tagged bacteriophage N4 RNA polymerase gene, complete cds Length = 10617 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 tgagcgtgggcgtgaaccac 434 |||||||||||||||||||| Sbjct: 9183 tgagcgtgggcgtgaaccac 9202
>emb|AL807380.6| Mouse DNA sequence from clone RP23-192G18 on chromosome 2, complete sequence Length = 208614 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 gctggatgtgctggtgtgca 354 |||||||||||||||||||| Sbjct: 6427 gctggatgtgctggtgtgca 6446 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,727,302 Number of Sequences: 3902068 Number of extensions: 2727302 Number of successful extensions: 73596 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 111 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 68262 Number of HSP's gapped (non-prelim): 5324 length of query: 437 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 415 effective length of database: 17,147,199,772 effective search space: 7116087905380 effective search space used: 7116087905380 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
