ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast76b05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TPT2_BRAOB (P52178) Triose phosphate/phosphate translocator, non... 47 8e-06
2GPT1_ARATH (Q9M5A9) Glucose-6-phosphate/phosphate translocator 1... 35 0.033
3GPT2_ARATH (Q94B38) Glucose-6-phosphate/phosphate translocator 2... 34 0.095
4TPT1_BRAOB (P52177) Triose phosphate/phosphate translocator, chl... 32 0.28
5TPT_SOLTU (P29463) Triose phosphate/phosphate translocator, chlo... 30 1.0
6TPT_SPIOL (P11869) Triose phosphate/phosphate translocator, chlo... 30 1.8
7TPT_PEA (P21727) Triose phosphate/phosphate translocator, chloro... 29 3.0
8TPT_FLATR (P49132) Triose phosphate/phosphate translocator, chlo... 28 4.0
9TPT_FLAPR (P49131) Triose phosphate/phosphate translocator, chlo... 28 4.0
10TPT_MAIZE (P49133) Triose phosphate/phosphate translocator, chlo... 28 4.0
11OPT2_ARATH (O04514) Probable oligopeptide transporter 2 (AtOPT2) 28 6.8

>TPT2_BRAOB (P52178) Triose phosphate/phosphate translocator, non-green|
           plastid, chloroplast precursor (CTPT)
          Length = 402

 Score = 47.4 bits (111), Expect = 8e-06
 Identities = 21/44 (47%), Positives = 27/44 (61%)
 Frame = +1

Query: 277 TPSADEVAAGGGIAGTVQLGAMIVAWYLLNIYFNIYNKQVLQVL 408
           T   +E    G +   ++LG +   WYL NIYFNIYNKQVL+ L
Sbjct: 84  TAVPEEGEGSGKMTKVLELGLLFAMWYLFNIYFNIYNKQVLKAL 127



to top

>GPT1_ARATH (Q9M5A9) Glucose-6-phosphate/phosphate translocator 1, chloroplast|
           precursor
          Length = 388

 Score = 35.4 bits (80), Expect = 0.033
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = +1

Query: 280 PSADEVAAG---GGIAGTVQLGAMIVAWYLLNIYFNIYNKQVL 399
           P  D+ AA       A  +++G     W+ LN+ FNIYNK+VL
Sbjct: 77  PIGDDAAAAETKSEAAKKLKIGIYFATWWALNVVFNIYNKKVL 119



to top

>GPT2_ARATH (Q94B38) Glucose-6-phosphate/phosphate translocator 2, chloroplast|
           precursor
          Length = 388

 Score = 33.9 bits (76), Expect = 0.095
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +1

Query: 316 AGTVQLGAMIVAWYLLNIYFNIYNKQVL 399
           A  +++G     W+ LN+ FNIYNK+VL
Sbjct: 92  AQKLKIGIYFATWWALNVVFNIYNKKVL 119



to top

>TPT1_BRAOB (P52177) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT)
          Length = 407

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 11/52 (21%)
 Frame = +1

Query: 274 LTPSADEVAAGGGIAGTVQLG-----------AMIVAWYLLNIYFNIYNKQV 396
           L P     A GG  AG  ++G            +++ WY LN+ FNI NK++
Sbjct: 75  LKPVRAASAEGGDSAGETKVGFLGKYPWLVTGILLLMWYFLNVIFNILNKKI 126



to top

>TPT_SOLTU (P29463) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT) (E29)
          Length = 414

 Score = 30.4 bits (67), Expect = 1.0
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +1

Query: 283 SADEVAAGGGIAGTVQLGAMIVAWYLLNIYFNIYNKQV 396
           S+ +   G     T+  G     WY LN+ FNI NK++
Sbjct: 96  SSGDAKVGFFNKATLTTGFFFFMWYFLNVIFNILNKKI 133



to top

>TPT_SPIOL (P11869) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT) (p36) (E29)
          Length = 404

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +1

Query: 334 GAMIVAWYLLNIYFNIYNKQV 396
           G+    WY LN+ FNI NK++
Sbjct: 103 GSFFFMWYFLNVIFNILNKKI 123



to top

>TPT_PEA (P21727) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT) (p36) (E30)
          Length = 402

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 334 GAMIVAWYLLNIYFNIYNKQV 396
           G     WY LN+ FNI NK++
Sbjct: 101 GFFFFTWYFLNVIFNILNKKI 121



to top

>TPT_FLATR (P49132) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT)
          Length = 407

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 334 GAMIVAWYLLNIYFNIYNKQV 396
           G     WY LN+ FNI NK++
Sbjct: 106 GFFFFMWYFLNVIFNILNKKI 126



to top

>TPT_FLAPR (P49131) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT)
          Length = 408

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 334 GAMIVAWYLLNIYFNIYNKQV 396
           G     WY LN+ FNI NK++
Sbjct: 107 GFFFFMWYFLNVIFNILNKKI 127



to top

>TPT_MAIZE (P49133) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT)
          Length = 409

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +1

Query: 334 GAMIVAWYLLNIYFNIYNKQV 396
           G     WY LN+ FNI NK++
Sbjct: 109 GFFFFMWYFLNVIFNILNKKI 129



to top

>OPT2_ARATH (O04514) Probable oligopeptide transporter 2 (AtOPT2)|
          Length = 722

 Score = 27.7 bits (60), Expect = 6.8
 Identities = 16/32 (50%), Positives = 19/32 (59%)
 Frame = +1

Query: 304 GGGIAGTVQLGAMIVAWYLLNIYFNIYNKQVL 399
           G  IAGTV +    VAWYLL    NI  K++L
Sbjct: 494 GTVIAGTVNIS---VAWYLLTSVENICQKELL 522


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,248,859
Number of Sequences: 219361
Number of extensions: 154489
Number of successful extensions: 531
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 531
length of database: 80,573,946
effective HSP length: 111
effective length of database: 56,224,875
effective search space used: 1349397000
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top