ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast76a09
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1COGT2_ARATH (Q9SK82) Cytokinin-O-glucosyltransferase 2 (EC 2.4.1... 32 0.32
2IAAG_MAIZE (Q41819) Indole-3-acetate beta-glucosyltransferase (E... 32 0.32
3GRN_RAT (P23785) Granulins precursor [Contains: Acrogranin; Gran... 32 0.42
4GRN_MOUSE (P28798) Granulins precursor (Proepithelin) (PEPI) (PC... 28 6.0
5DNAJ_CHLAB (Q5L6F7) Chaperone protein dnaJ 28 7.8
6MURG_BIFLO (Q8CY50) UDP-N-acetylglucosamine--N-acetylmuramyl-(pe... 28 7.8

>COGT2_ARATH (Q9SK82) Cytokinin-O-glucosyltransferase 2 (EC 2.4.1.-) (Zeatin|
           O-glucosyltransferase 2)
          Length = 489

 Score = 32.3 bits (72), Expect = 0.32
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +2

Query: 125 EAPHFLVVTYPAQGHINP 178
           + PH + V YPAQGHINP
Sbjct: 10  QKPHVVCVPYPAQGHINP 27



to top

>IAAG_MAIZE (Q41819) Indole-3-acetate beta-glucosyltransferase (EC 2.4.1.121)|
           (IAA-Glu synthetase) ((Uridine
           5'-diphosphate-glucose:indol-3-ylacetyl)-beta-D-glucosyl
           transferase)
          Length = 471

 Score = 32.3 bits (72), Expect = 0.32
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = +2

Query: 128 APHFLVVTYPAQGHINP 178
           APH LVV +P QGH+NP
Sbjct: 2   APHVLVVPFPGQGHMNP 18



to top

>GRN_RAT (P23785) Granulins precursor [Contains: Acrogranin; Granulin-1|
           (Granulin G); Granulin-2 (Granulin F); Granulin-3
           (Granulin B) (Epithelin-2); Granulin-4 (Granulin A)
           (Epithelin-1); Granulin-5 (Granulin C); Granulin-6
           (Granulin D); Granulin-7 (Gran
          Length = 588

 Score = 32.0 bits (71), Expect = 0.42
 Identities = 13/33 (39%), Positives = 16/33 (48%)
 Frame = -1

Query: 109 GRHCCVRAMRCECKKTRAYQVSKSVLTGVGCGG 11
           G+HCC R   C        Q+S S+L  V C G
Sbjct: 95  GQHCCPRGFHCSADGKSCSQISDSLLGAVQCPG 127



to top

>GRN_MOUSE (P28798) Granulins precursor (Proepithelin) (PEPI) (PC cell-derived|
           growth factor) (PCDGF) [Contains: Acrogranin;
           Granulin-1; Granulin-2; Granulin-3; Granulin-4;
           Granulin-5; Granulin-6; Granulin-7]
          Length = 589

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -1

Query: 109 GRHCCVRAMRCECKKTRAYQVSKSVLTGVGCGG 11
           G HCC +   C       +Q+S + L  V C G
Sbjct: 95  GYHCCPQGFHCSADGKSCFQMSDNPLGAVQCPG 127



to top

>DNAJ_CHLAB (Q5L6F7) Chaperone protein dnaJ|
          Length = 391

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = -2

Query: 159 AGYVTTRKCGASPTRSMAGIAACVRCDASAR 67
           +GY T   C  S   S  GI  C RC  S +
Sbjct: 156 SGYKTCETCSGSGASSKQGIKCCDRCKGSGQ 186



to top

>MURG_BIFLO (Q8CY50) UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide)|
           pyrophosphoryl-undecaprenol N-acetylglucosamine
           transferase (EC 2.4.1.227)
           (Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc
           transferase)
          Length = 393

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = +2

Query: 131 PHFLVVTYPAQGHINPXXXXXXXXXXXTPGARVTV-STAVSACRKMFPD 274
           PH ++      GH+NP            P A+VTV  TAV   + + P+
Sbjct: 6   PHIVLAGGGTAGHVNPLLAVAGAIRDIEPTAQVTVIGTAVGLEKDLVPE 54


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,043,881
Number of Sequences: 219361
Number of extensions: 393541
Number of successful extensions: 1092
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of database: 80,573,946
effective HSP length: 71
effective length of database: 64,999,315
effective search space used: 1559983560
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top