ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast76a08 |
|---|---|
| Clone Library Name | barley_pub |
>NEP1_NEPGR (Q766C3) Aspartic proteinase nepenthesin-1 precursor (EC 3.4.23.-)| (Nepenthesin-I) Length = 437 Score = 57.8 bits (138), Expect = 6e-09 Identities = 38/117 (32%), Positives = 52/117 (44%), Gaps = 1/117 (0%) Frame = +2 Query: 5 FDPRRSRSYNAVGCAAPLCRRLDSGGCDLRRSACLYQVAYGDGSVTAGDFATETLTFXXX 184 F+P+ S S++ + C++ LC+ L S C + C Y YGDGS T G TETLTF Sbjct: 137 FNPQGSSSFSTLPCSSQLCQALSSPTCS--NNFCQYTYGYGDGSETQGSMGTETLTF-GS 193 Query: 185 XXXXXXXLGCGHDNEXXXXXXXXXXXXXXXX-XSFPTQISRRYGRSFSYCLVDRTSS 352 GCG +N+ S P+Q+ FSYC+ SS Sbjct: 194 VSIPNITFGCGENNQGFGQGNGAGLVGMGRGPLSLPSQLD---VTKFSYCMTPIGSS 247
>NEP2_NEPGR (Q766C2) Aspartic proteinase nepenthesin-2 precursor (EC 3.4.23.-)| (Nepenthesin-II) Length = 438 Score = 57.4 bits (137), Expect = 8e-09 Identities = 38/118 (32%), Positives = 52/118 (44%), Gaps = 1/118 (0%) Frame = +2 Query: 5 FDPRRSRSYNAVGCAAPLCRRLDSGGCDLRRSACLYQVAYGDGSVTAGDFATETLTFXXX 184 F+P+ S S++ + C + C+ L S C+ + C Y YGDGS T G ATET TF Sbjct: 138 FNPQDSSSFSTLPCESQYCQDLPSETCN--NNECQYTYGYGDGSTTQGYMATETFTF-ET 194 Query: 185 XXXXXXXLGCGHDNEXXXXXXXXXXXXXX-XXXSFPTQISRRYGRSFSYCLVDRTSSA 355 GCG DN+ S P+Q+ FSYC+ SS+ Sbjct: 195 SSVPNIAFGCGEDNQGFGQGNGAGLIGMGWGPLSLPSQLG---VGQFSYCMTSYGSSS 249
>NEP2_NEPDI (P69477) Aspartic proteinase nepenthesin-2 (EC 3.4.23.-)| (Nepenthesin-II) (Fragments) Length = 178 Score = 36.2 bits (82), Expect = 0.020 Identities = 19/48 (39%), Positives = 24/48 (50%) Frame = +2 Query: 20 SRSYNAVGCAAPLCRRLDSGGCDLRRSACLYQVAYGDGSVTAGDFATE 163 S S++ + C + C+ L S CD C Y YGDGS T G A E Sbjct: 37 SSSFSTLPCESQYCQDLPSETCD-----CQYTYGYGDGSSTQGYMAXE 79
>WRT1_CAEEL (Q94128) Warthog protein 1 precursor [Contains: Warthog protein 1| N-product; Warthog protein 1 C-product] Length = 485 Score = 29.6 bits (65), Expect = 1.9 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = +2 Query: 38 VGCAAPLCRRLDSGGCDLRRSACLYQVAYG-DGSVTAGDFA 157 +GC +P C ++GG DLR + A G DG GD A Sbjct: 43 LGCGSPTCFGAENGGRDLRHDSSFMAGADGDDGFFRDGDLA 83
>CWC22_ASPFU (Q4WKB9) Pre-mRNA-splicing factor cwc22| Length = 881 Score = 29.6 bits (65), Expect = 1.9 Identities = 21/54 (38%), Positives = 26/54 (48%), Gaps = 3/54 (5%) Frame = -3 Query: 165 VSVAKSPAVTEPSP*ATW*RHALRRRSQPPESSLRQSGAA---QPTAL*ERERR 13 VS +SP PSP RRR PP SL+++G A P ERER+ Sbjct: 28 VSRKRSPPSRSPSP---------RRRRSPPGDSLKENGDAPRIDPERAVERERQ 72
>YPS1_YEAST (P32329) Aspartic proteinase 3 precursor (EC 3.4.23.41) (Yapsin-1)| Length = 569 Score = 29.3 bits (64), Expect = 2.4 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +2 Query: 74 SGGCDLRRSACLYQVAYGDGSVTAGDFATETL 169 SG R + + ++YGDG+ +G F T+ L Sbjct: 195 SGSSTFRSNNTYFSISYGDGTFASGTFGTDVL 226
>EX5B_MYCTU (P96920) Exodeoxyribonuclease V beta chain (EC 3.1.11.5)| Length = 1094 Score = 29.3 bits (64), Expect = 2.4 Identities = 15/32 (46%), Positives = 18/32 (56%) Frame = -2 Query: 292 GGEG*TASAEPEEARRRDEQTLVVVAAPQSDA 197 G E T ++EP R DE + VVAAP S A Sbjct: 787 GSEAVTVTSEPAAGGRADEVEIAVVAAPGSGA 818
>PROA_RHIME (Q92LB2) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 427 Score = 28.1 bits (61), Expect = 5.4 Identities = 17/41 (41%), Positives = 21/41 (51%) Frame = +2 Query: 47 AAPLCRRLDSGGCDLRRSACLYQVAYGDGSVTAGDFATETL 169 A PL L GC++R S L V G + T D+ATE L Sbjct: 284 AKPLLEALVDAGCEVRASDDLASVMPGLKAATDEDWATEYL 324
>CARP_CRYPA (P11838) Endothiapepsin precursor (EC 3.4.23.22) (Aspartate| protease) Length = 419 Score = 28.1 bits (61), Expect = 5.4 Identities = 10/25 (40%), Positives = 18/25 (72%) Frame = +2 Query: 98 SACLYQVAYGDGSVTAGDFATETLT 172 S + ++YGDGS ++GD T+T++ Sbjct: 160 SGATWSISYGDGSSSSGDVYTDTVS 184
>CARP_SACFI (P22929) Acid protease precursor (EC 3.4.23.-)| Length = 390 Score = 28.1 bits (61), Expect = 5.4 Identities = 10/21 (47%), Positives = 16/21 (76%) Frame = +2 Query: 110 YQVAYGDGSVTAGDFATETLT 172 + ++YGDGS GD+A ET++ Sbjct: 128 FSISYGDGSSARGDWAQETVS 148
>CARP_SYNRA (P81214) Syncephapepsin precursor (EC 3.4.23.-)| Length = 395 Score = 27.3 bits (59), Expect = 9.3 Identities = 16/55 (29%), Positives = 25/55 (45%) Frame = +2 Query: 5 FDPRRSRSYNAVGCAAPLCRRLDSGGCDLRRSACLYQVAYGDGSVTAGDFATETL 169 FDP +S +Y VG + +Q++YGDGS +G AT+ + Sbjct: 128 FDPTKSSTYKKVGKS--------------------WQISYGDGSSASGITATDNV 162
>SYH_VIBCH (Q9KTX0) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA| ligase) (HisRS) Length = 422 Score = 27.3 bits (59), Expect = 9.3 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +2 Query: 77 GGCDLRRSACLYQVAYGDGSVTAGDFATETL 169 G D+RRS +Y V G+G++ AG E L Sbjct: 320 GNTDVRRSVDVYMVTAGEGTMMAGMKLAEQL 350 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 31,530,816 Number of Sequences: 219361 Number of extensions: 411965 Number of successful extensions: 1171 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1126 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1170 length of database: 80,573,946 effective HSP length: 99 effective length of database: 58,857,207 effective search space used: 1412572968 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
