ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast76a05
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LAX1_ORYSA (Q5N892) Auxin transporter-like protein 1 137 1e-32
2AUX1_ARATH (Q96247) Auxin transporter protein 1 (Auxin influx ca... 129 2e-30
3LAX1_ARATH (Q9LFB2) Auxin transporter-like protein 1 (AUX1-like ... 129 3e-30
4LAX2_ORYSA (Q688J2) Auxin transporter-like protein 2 129 3e-30
5LAX4_MEDTR (Q8L884) Auxin transporter-like protein 4 (AUX1-like ... 128 5e-30
6LAX2_MEDTR (Q9FEL7) Auxin transporter-like protein 2 (AUX1-like ... 127 1e-29
7LAX1_MEDTR (Q9FEL8) Auxin transporter-like protein 1 (AUX1-like ... 120 2e-27
8LAX2_ARATH (Q9S836) Auxin transporter-like protein 2 (AUX1-like ... 114 9e-26
9LAX5_MEDTR (Q8L883) Auxin transporter-like protein 5 (AUX1-like ... 112 4e-25
10LAX3_MEDTR (Q9FEL6) Auxin transporter-like protein 3 (AUX1-like ... 107 1e-23
11LAX3_ORYSA (Q7XGU4) Auxin transporter-like protein 3 105 3e-23
12LAX3_ARATH (Q9CA25) Auxin transporter-like protein 3 (AUX1-like ... 104 9e-23
13LAX4_ORYSA (Q53JG7) Putative auxin transporter-like protein 4 99 5e-21
14YKW5_YEAST (P36030) Hypothetical UPF0320 protein YKL225W 31 1.3
15O1052_MOUSE (Q8VGR8) Olfactory receptor 1052 (Olfactory receptor... 28 6.4
16YAG8_YEAST (Q8TGK7) Hypothetical UPF0320 protein YAL068W-A 28 8.3

>LAX1_ORYSA (Q5N892) Auxin transporter-like protein 1|
          Length = 492

 Score =  137 bits (345), Expect = 1e-32
 Identities = 70/89 (78%), Positives = 72/89 (80%)
 Frame = +3

Query: 3   AVGALLVSFTVYIIPALAHILTYRSASARANAAEKPPVFLPSWTGMFVLNAFIXXXXXXX 182
           AVGALLVSFTVYIIPALAHILTYR+ASAR NAAEKPP FLPSWTGMFVLN FI       
Sbjct: 387 AVGALLVSFTVYIIPALAHILTYRTASARMNAAEKPPFFLPSWTGMFVLNMFIVVWVLVV 446

Query: 183 XXXXXXXASMVNFIRQINTFGLFAKCYQC 269
                  ASMVNFIRQI+TFGLFAKCYQC
Sbjct: 447 GFGLGGWASMVNFIRQIDTFGLFAKCYQC 475



to top

>AUX1_ARATH (Q96247) Auxin transporter protein 1 (Auxin influx carrier protein|
           1) (Polar auxin transport inhibitor resistant protein 1)
          Length = 485

 Score =  129 bits (325), Expect = 2e-30
 Identities = 62/89 (69%), Positives = 71/89 (79%)
 Frame = +3

Query: 3   AVGALLVSFTVYIIPALAHILTYRSASARANAAEKPPVFLPSWTGMFVLNAFIXXXXXXX 182
           AVGALLVSFTVYIIP+LAH+LTYRSASAR NAAEKPP F+PSWT M+VLNAF+       
Sbjct: 379 AVGALLVSFTVYIIPSLAHMLTYRSASARQNAAEKPPFFMPSWTAMYVLNAFVVVWVLIV 438

Query: 183 XXXXXXXASMVNFIRQINTFGLFAKCYQC 269
                  AS+ NF+RQ++TFGLFAKCYQC
Sbjct: 439 GFGFGGWASVTNFVRQVDTFGLFAKCYQC 467



to top

>LAX1_ARATH (Q9LFB2) Auxin transporter-like protein 1 (AUX1-like protein 1)|
          Length = 488

 Score =  129 bits (324), Expect = 3e-30
 Identities = 63/89 (70%), Positives = 71/89 (79%)
 Frame = +3

Query: 3   AVGALLVSFTVYIIPALAHILTYRSASARANAAEKPPVFLPSWTGMFVLNAFIXXXXXXX 182
           AVGALLV+FTVYIIPALAH+LTYR+ASAR NAAEKPP F+PSW G++V+NAFI       
Sbjct: 385 AVGALLVTFTVYIIPALAHMLTYRTASARRNAAEKPPFFIPSWAGVYVINAFIVVWVLVL 444

Query: 183 XXXXXXXASMVNFIRQINTFGLFAKCYQC 269
                  ASM NFIRQI+TFGLFAKCYQC
Sbjct: 445 GFGFGGWASMTNFIRQIDTFGLFAKCYQC 473



to top

>LAX2_ORYSA (Q688J2) Auxin transporter-like protein 2|
          Length = 482

 Score =  129 bits (324), Expect = 3e-30
 Identities = 63/89 (70%), Positives = 71/89 (79%)
 Frame = +3

Query: 3   AVGALLVSFTVYIIPALAHILTYRSASARANAAEKPPVFLPSWTGMFVLNAFIXXXXXXX 182
           AVGALLVSFTVYIIP+L+HILTYRSASAR NAAEKPP FLPSW+GMFV+N F+       
Sbjct: 378 AVGALLVSFTVYIIPSLSHILTYRSASARLNAAEKPPPFLPSWSGMFVVNVFVVAWVLVV 437

Query: 183 XXXXXXXASMVNFIRQINTFGLFAKCYQC 269
                  AS+ NFI+QI+TFGLFAKCYQC
Sbjct: 438 GFGLGGWASVTNFIKQIDTFGLFAKCYQC 466



to top

>LAX4_MEDTR (Q8L884) Auxin transporter-like protein 4 (AUX1-like protein 4)|
           (MtLAX4)
          Length = 482

 Score =  128 bits (322), Expect = 5e-30
 Identities = 64/89 (71%), Positives = 70/89 (78%)
 Frame = +3

Query: 3   AVGALLVSFTVYIIPALAHILTYRSASARANAAEKPPVFLPSWTGMFVLNAFIXXXXXXX 182
           AVGALLV+FTVYIIPALAH+LTYR+ASAR NA EKPP FLPSWT ++VLNAFI       
Sbjct: 379 AVGALLVTFTVYIIPALAHMLTYRTASARKNAVEKPPSFLPSWTAVYVLNAFIVVWVLVV 438

Query: 183 XXXXXXXASMVNFIRQINTFGLFAKCYQC 269
                  ASM NFIRQI+TFGLFAKCYQC
Sbjct: 439 GFGFGGWASMTNFIRQIDTFGLFAKCYQC 467



to top

>LAX2_MEDTR (Q9FEL7) Auxin transporter-like protein 2 (AUX1-like protein 2)|
           (MtLAX2)
          Length = 484

 Score =  127 bits (318), Expect = 1e-29
 Identities = 62/89 (69%), Positives = 68/89 (76%)
 Frame = +3

Query: 3   AVGALLVSFTVYIIPALAHILTYRSASARANAAEKPPVFLPSWTGMFVLNAFIXXXXXXX 182
           AVGALLVSFTVYIIP+ AH+LTYR ASAR NAAEKPP F+PSWT M++ NAFI       
Sbjct: 379 AVGALLVSFTVYIIPSAAHMLTYRKASARKNAAEKPPFFMPSWTAMYIFNAFIVIWVLVV 438

Query: 183 XXXXXXXASMVNFIRQINTFGLFAKCYQC 269
                  ASM NFIRQI+TFGLFAKCYQC
Sbjct: 439 GFGFGGWASMTNFIRQIDTFGLFAKCYQC 467



to top

>LAX1_MEDTR (Q9FEL8) Auxin transporter-like protein 1 (AUX1-like protein 1)|
           (MtLAX1)
          Length = 479

 Score =  120 bits (300), Expect = 2e-27
 Identities = 59/89 (66%), Positives = 68/89 (76%)
 Frame = +3

Query: 3   AVGALLVSFTVYIIPALAHILTYRSASARANAAEKPPVFLPSWTGMFVLNAFIXXXXXXX 182
           AVGALLVSFTVY+IPA AH+LTYRSASAR NAAEK P  +PSWT M+V+NAF+       
Sbjct: 378 AVGALLVSFTVYVIPASAHMLTYRSASARQNAAEKLPKVIPSWTLMYVINAFVVIWVTIV 437

Query: 183 XXXXXXXASMVNFIRQINTFGLFAKCYQC 269
                  ASM NFI+Q++TFGLFAKCYQC
Sbjct: 438 GFGFGGWASMTNFIKQVDTFGLFAKCYQC 466



to top

>LAX2_ARATH (Q9S836) Auxin transporter-like protein 2 (AUX1-like protein 2)|
          Length = 483

 Score =  114 bits (285), Expect = 9e-26
 Identities = 55/88 (62%), Positives = 64/88 (72%)
 Frame = +3

Query: 6   VGALLVSFTVYIIPALAHILTYRSASARANAAEKPPVFLPSWTGMFVLNAFIXXXXXXXX 185
           VG+LLVSFTVYIIPALAHI T+RS++AR NA E+PP FL  WTG F +NAFI        
Sbjct: 374 VGSLLVSFTVYIIPALAHIFTFRSSAARENAVEQPPRFLGRWTGAFTINAFIVVWVFIVG 433

Query: 186 XXXXXXASMVNFIRQINTFGLFAKCYQC 269
                 ASM+NF+ QI+TFGLF KCYQC
Sbjct: 434 FGFGGWASMINFVHQIDTFGLFTKCYQC 461



to top

>LAX5_MEDTR (Q8L883) Auxin transporter-like protein 5 (AUX1-like protein 5)|
           (MtLAX5)
          Length = 490

 Score =  112 bits (279), Expect = 4e-25
 Identities = 54/88 (61%), Positives = 63/88 (71%)
 Frame = +3

Query: 6   VGALLVSFTVYIIPALAHILTYRSASARANAAEKPPVFLPSWTGMFVLNAFIXXXXXXXX 185
           VG+LLVSFTVYIIPALAHI T++S+SAR NA E+PP F+  W G FV+N FI        
Sbjct: 376 VGSLLVSFTVYIIPALAHIFTFKSSSARQNAVEQPPKFVGRWVGTFVINVFIVVWVLIVG 435

Query: 186 XXXXXXASMVNFIRQINTFGLFAKCYQC 269
                 ASMVNF+ QI+TFGLF KCYQC
Sbjct: 436 FGFGGWASMVNFVHQIDTFGLFTKCYQC 463



to top

>LAX3_MEDTR (Q9FEL6) Auxin transporter-like protein 3 (AUX1-like protein 3)|
           (MtLAX3)
          Length = 465

 Score =  107 bits (266), Expect = 1e-23
 Identities = 50/88 (56%), Positives = 62/88 (70%)
 Frame = +3

Query: 6   VGALLVSFTVYIIPALAHILTYRSASARANAAEKPPVFLPSWTGMFVLNAFIXXXXXXXX 185
           VG+LLVSFTVYIIPALAH++T+ SA AR NA E+PP FL  W G++ +N F+        
Sbjct: 373 VGSLLVSFTVYIIPALAHMVTFASAPARENAVERPPSFLGGWVGLYSVNVFVAVWVLVVG 432

Query: 186 XXXXXXASMVNFIRQINTFGLFAKCYQC 269
                 ASM+NF+ QI TFGLFAKC+QC
Sbjct: 433 FGLGGWASMLNFVHQIKTFGLFAKCFQC 460



to top

>LAX3_ORYSA (Q7XGU4) Auxin transporter-like protein 3|
          Length = 547

 Score =  105 bits (263), Expect = 3e-23
 Identities = 48/89 (53%), Positives = 64/89 (71%)
 Frame = +3

Query: 3   AVGALLVSFTVYIIPALAHILTYRSASARANAAEKPPVFLPSWTGMFVLNAFIXXXXXXX 182
           AVG+LLVSFTVYIIP+LA+++T+RS  +R NA E+PP F   WTG +V+N+F+       
Sbjct: 394 AVGSLLVSFTVYIIPSLAYMVTFRSPQSRQNAVERPPRFAGGWTGAYVINSFVVAWVLVV 453

Query: 183 XXXXXXXASMVNFIRQINTFGLFAKCYQC 269
                  AS+ NF+ Q++TFGLFAKCYQC
Sbjct: 454 GFGFGGWASITNFVHQVDTFGLFAKCYQC 482



to top

>LAX3_ARATH (Q9CA25) Auxin transporter-like protein 3 (AUX1-like protein 3)|
          Length = 470

 Score =  104 bits (259), Expect = 9e-23
 Identities = 50/89 (56%), Positives = 61/89 (68%)
 Frame = +3

Query: 3   AVGALLVSFTVYIIPALAHILTYRSASARANAAEKPPVFLPSWTGMFVLNAFIXXXXXXX 182
           AVG+LLVSFTVYIIPALAH+LT+  A +R NA E+PP  +  W G + +N F+       
Sbjct: 377 AVGSLLVSFTVYIIPALAHMLTFAPAPSRENAVERPPRVVGGWMGTYCINIFVVVWVFVV 436

Query: 183 XXXXXXXASMVNFIRQINTFGLFAKCYQC 269
                  ASMVNF+RQI+TFGLF KCYQC
Sbjct: 437 GFGFGGWASMVNFVRQIDTFGLFTKCYQC 465



to top

>LAX4_ORYSA (Q53JG7) Putative auxin transporter-like protein 4|
          Length = 480

 Score = 98.6 bits (244), Expect = 5e-21
 Identities = 47/88 (53%), Positives = 56/88 (63%)
 Frame = +3

Query: 6   VGALLVSFTVYIIPALAHILTYRSASARANAAEKPPVFLPSWTGMFVLNAFIXXXXXXXX 185
           VG+ LVSFTVYIIPA+AH+ T+  A+AR NA E PP  L  W G F  N F+        
Sbjct: 389 VGSFLVSFTVYIIPAMAHMATFAPAAARENAVEPPPRALGGWPGTFAANCFVVAWVLVVG 448

Query: 186 XXXXXXASMVNFIRQINTFGLFAKCYQC 269
                 AS VNF+RQ++TFGLF KCYQC
Sbjct: 449 FGFGGWASTVNFVRQVDTFGLFTKCYQC 476



to top

>YKW5_YEAST (P36030) Hypothetical UPF0320 protein YKL225W|
          Length = 115

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 15/45 (33%), Positives = 21/45 (46%)
 Frame = +3

Query: 18  LVSFTVYIIPALAHILTYRSASARANAAEKPPVFLPSWTGMFVLN 152
           + +   YIIP L HILT +      N   K P+ LP    + + N
Sbjct: 68  ITALNAYIIPLLLHILTIQFIHTYFNIPTKSPLKLPKHKNILLFN 112



to top

>O1052_MOUSE (Q8VGR8) Olfactory receptor 1052 (Olfactory receptor 172-1)|
          Length = 312

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 17/32 (53%), Positives = 20/32 (62%)
 Frame = +3

Query: 3   AVGALLVSFTVYIIPALAHILTYRSASARANA 98
           A+G LL+ F  Y+  ALA IL  RSAS R  A
Sbjct: 207 AIGTLLIVFISYLFIALA-ILRIRSASGRQKA 237



to top

>YAG8_YEAST (Q8TGK7) Hypothetical UPF0320 protein YAL068W-A|
          Length = 84

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 14/45 (31%), Positives = 19/45 (42%)
 Frame = +3

Query: 18  LVSFTVYIIPALAHILTYRSASARANAAEKPPVFLPSWTGMFVLN 152
           + +   Y+IP L HILT        N  EK P   P    + + N
Sbjct: 37  ITALNTYVIPLLHHILTTPFIYTYVNITEKSPQKSPKHKNILLFN 81


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,964,376
Number of Sequences: 219361
Number of extensions: 254005
Number of successful extensions: 839
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 831
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top