ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast76a05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT008974.1| Triticum aestivum clone wdk2c.pk0002.a4:fis, full insert mRNA sequence Length = 1248 Score = 561 bits (283), Expect = e-157 Identities = 324/337 (96%), Gaps = 3/337 (0%) Strand = Plus / Plus Query: 1 ccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgccctcgcccaca 60 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 514 ccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgcgctcgcccaca 573 Query: 61 tcctcacctaccgatccgcatccgcacgcgccaacgcggcggagaagccgcccgtcttcc 120 | ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 574 tgctcacctaccgatccgcatccgcccgcgccaacgcggcggagaagccgcccttcttcc 633 Query: 121 tgccgagctggacggggatgttcgtgctcaacgccttcatcgtggtgtgggtgctggtgg 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 634 tgccgagctggacggggatgttcgtgctcaacgccttcatcgtggtgtgggtgttcgtgg 693 Query: 181 tgggcttcgggctgggcggctgggccagcatggtcaacttcatccgccagatcaacacct 240 | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 694 tcggcttcgggctcggcggctgggccagcatggtcaacttcatccgccagatcaacacct 753 Query: 241 tcggcctcttcgccaagtgctaccagtgccccaagcccggcgccgccgccgtcgccccgg 300 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 754 tcggcctcttcgccaagtgctaccagtgccccaagcccgg---cgccgccgtcgccccgg 810 Query: 301 gcccctcctcgttgcaccactagctccgtcgtcgtcg 337 ||||||||||||||||||||||||||| ||| ||||| Sbjct: 811 gcccctcctcgttgcaccactagctccctcgccgtcg 847 Score = 42.1 bits (21), Expect = 1.4 Identities = 30/33 (90%) Strand = Plus / Plus Query: 383 ggcagccggcacgggggaaccagtactggtgct 415 |||||||||||||| ||| ||||||||| |||| Sbjct: 928 ggcagccggcacggcggatccagtactgttgct 960
>ref|NM_190667.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1479 Score = 355 bits (179), Expect = 7e-95 Identities = 254/279 (91%) Strand = Plus / Plus Query: 1 ccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgccctcgcccaca 60 ||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 1157 ccgccgtcggcgcgctcctcgtcagcttcaccgtctacatcatcccggcactcgcccaca 1216 Query: 61 tcctcacctaccgatccgcatccgcacgcgccaacgcggcggagaagccgcccgtcttcc 120 ||||||||||||| | || ||||| ||| ||||||||||||||||| || |||||| Sbjct: 1217 tcctcacctaccgtacggcctccgcgcgcatgaacgcggcggagaagccaccgttcttcc 1276 Query: 121 tgccgagctggacggggatgttcgtgctcaacgccttcatcgtggtgtgggtgctggtgg 180 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 1277 tgccgagctggacggggatgttcgtgctcaacatgttcatcgtggtgtgggtgctcgtgg 1336 Query: 181 tgggcttcgggctgggcggctgggccagcatggtcaacttcatccgccagatcaacacct 240 ||||||||||||| |||||||||||||||||||||||||||||| | |||||| |||| | Sbjct: 1337 tgggcttcgggctcggcggctgggccagcatggtcaacttcatcaggcagatcgacacgt 1396 Query: 241 tcggcctcttcgccaagtgctaccagtgccccaagcccg 279 |||| ||||||||||||||||||||||| |||||||||| Sbjct: 1397 tcgggctcttcgccaagtgctaccagtgtcccaagcccg 1435
>dbj|AK103981.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-C03, full insert sequence Length = 1494 Score = 355 bits (179), Expect = 7e-95 Identities = 254/279 (91%) Strand = Plus / Plus Query: 1 ccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgccctcgcccaca 60 ||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 645 ccgccgtcggcgcgctcctcgtcagcttcaccgtctacatcatcccggcactcgcccaca 704 Query: 61 tcctcacctaccgatccgcatccgcacgcgccaacgcggcggagaagccgcccgtcttcc 120 ||||||||||||| | || ||||| ||| ||||||||||||||||| || |||||| Sbjct: 705 tcctcacctaccgtacggcctccgcgcgcatgaacgcggcggagaagccaccgttcttcc 764 Query: 121 tgccgagctggacggggatgttcgtgctcaacgccttcatcgtggtgtgggtgctggtgg 180 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 765 tgccgagctggacggggatgttcgtgctcaacatgttcatcgtggtgtgggtgctcgtgg 824 Query: 181 tgggcttcgggctgggcggctgggccagcatggtcaacttcatccgccagatcaacacct 240 ||||||||||||| |||||||||||||||||||||||||||||| | |||||| |||| | Sbjct: 825 tgggcttcgggctcggcggctgggccagcatggtcaacttcatcaggcagatcgacacgt 884 Query: 241 tcggcctcttcgccaagtgctaccagtgccccaagcccg 279 |||| ||||||||||||||||||||||| |||||||||| Sbjct: 885 tcgggctcttcgccaagtgctaccagtgtcccaagcccg 923
>dbj|AK103239.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123G17, full insert sequence Length = 1968 Score = 355 bits (179), Expect = 7e-95 Identities = 254/279 (91%) Strand = Plus / Plus Query: 1 ccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgccctcgcccaca 60 ||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 1283 ccgccgtcggcgcgctcctcgtcagcttcaccgtctacatcatcccggcactcgcccaca 1342 Query: 61 tcctcacctaccgatccgcatccgcacgcgccaacgcggcggagaagccgcccgtcttcc 120 ||||||||||||| | || ||||| ||| ||||||||||||||||| || |||||| Sbjct: 1343 tcctcacctaccgtacggcctccgcgcgcatgaacgcggcggagaagccaccgttcttcc 1402 Query: 121 tgccgagctggacggggatgttcgtgctcaacgccttcatcgtggtgtgggtgctggtgg 180 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 1403 tgccgagctggacggggatgttcgtgctcaacatgttcatcgtggtgtgggtgctcgtgg 1462 Query: 181 tgggcttcgggctgggcggctgggccagcatggtcaacttcatccgccagatcaacacct 240 ||||||||||||| |||||||||||||||||||||||||||||| | |||||| |||| | Sbjct: 1463 tgggcttcgggctcggcggctgggccagcatggtcaacttcatcaggcagatcgacacgt 1522 Query: 241 tcggcctcttcgccaagtgctaccagtgccccaagcccg 279 |||| ||||||||||||||||||||||| |||||||||| Sbjct: 1523 tcgggctcttcgccaagtgctaccagtgtcccaagcccg 1561
>dbj|AK100090.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023003J03, full insert sequence Length = 2409 Score = 355 bits (179), Expect = 7e-95 Identities = 254/279 (91%) Strand = Plus / Plus Query: 1 ccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgccctcgcccaca 60 ||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 1691 ccgccgtcggcgcgctcctcgtcagcttcaccgtctacatcatcccggcactcgcccaca 1750 Query: 61 tcctcacctaccgatccgcatccgcacgcgccaacgcggcggagaagccgcccgtcttcc 120 ||||||||||||| | || ||||| ||| ||||||||||||||||| || |||||| Sbjct: 1751 tcctcacctaccgtacggcctccgcgcgcatgaacgcggcggagaagccaccgttcttcc 1810 Query: 121 tgccgagctggacggggatgttcgtgctcaacgccttcatcgtggtgtgggtgctggtgg 180 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 1811 tgccgagctggacggggatgttcgtgctcaacatgttcatcgtggtgtgggtgctcgtgg 1870 Query: 181 tgggcttcgggctgggcggctgggccagcatggtcaacttcatccgccagatcaacacct 240 ||||||||||||| |||||||||||||||||||||||||||||| | |||||| |||| | Sbjct: 1871 tgggcttcgggctcggcggctgggccagcatggtcaacttcatcaggcagatcgacacgt 1930 Query: 241 tcggcctcttcgccaagtgctaccagtgccccaagcccg 279 |||| ||||||||||||||||||||||| |||||||||| Sbjct: 1931 tcgggctcttcgccaagtgctaccagtgtcccaagcccg 1969
>dbj|AK068536.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152G03, full insert sequence Length = 1542 Score = 355 bits (179), Expect = 7e-95 Identities = 254/279 (91%) Strand = Plus / Plus Query: 1 ccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgccctcgcccaca 60 ||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 857 ccgccgtcggcgcgctcctcgtcagcttcaccgtctacatcatcccggcactcgcccaca 916 Query: 61 tcctcacctaccgatccgcatccgcacgcgccaacgcggcggagaagccgcccgtcttcc 120 ||||||||||||| | || ||||| ||| ||||||||||||||||| || |||||| Sbjct: 917 tcctcacctaccgtacggcctccgcgcgcatgaacgcggcggagaagccaccgttcttcc 976 Query: 121 tgccgagctggacggggatgttcgtgctcaacgccttcatcgtggtgtgggtgctggtgg 180 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 977 tgccgagctggacggggatgttcgtgctcaacatgttcatcgtggtgtgggtgctcgtgg 1036 Query: 181 tgggcttcgggctgggcggctgggccagcatggtcaacttcatccgccagatcaacacct 240 ||||||||||||| |||||||||||||||||||||||||||||| | |||||| |||| | Sbjct: 1037 tgggcttcgggctcggcggctgggccagcatggtcaacttcatcaggcagatcgacacgt 1096 Query: 241 tcggcctcttcgccaagtgctaccagtgccccaagcccg 279 |||| ||||||||||||||||||||||| |||||||||| Sbjct: 1097 tcgggctcttcgccaagtgctaccagtgtcccaagcccg 1135
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 260 bits (131), Expect = 3e-66 Identities = 173/187 (92%) Strand = Plus / Plus Query: 93 aacgcggcggagaagccgcccgtcttcctgccgagctggacggggatgttcgtgctcaac 152 ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 36997145 aacgcggcggagaagccaccgttcttcctgccgagctggacggggatgttcgtgctcaac 36997204 Query: 153 gccttcatcgtggtgtgggtgctggtggtgggcttcgggctgggcggctgggccagcatg 212 |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 36997205 atgttcatcgtggtgtgggtgctcgtggtgggcttcgggctcggcggctgggccagcatg 36997264 Query: 213 gtcaacttcatccgccagatcaacaccttcggcctcttcgccaagtgctaccagtgcccc 272 |||||||||||| | |||||| |||| ||||| ||||||||||||||||||||||| ||| Sbjct: 36997265 gtcaacttcatcaggcagatcgacacgttcgggctcttcgccaagtgctaccagtgtccc 36997324 Query: 273 aagcccg 279 ||||||| Sbjct: 36997325 aagcccg 36997331 Score = 121 bits (61), Expect = 2e-24 Identities = 70/73 (95%) Strand = Plus / Plus Query: 1 ccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgccctcgcccaca 60 ||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 36995937 ccgccgtcggcgcgctcctcgtcagcttcaccgtctacatcatcccggcactcgcccaca 36995996 Query: 61 tcctcacctaccg 73 ||||||||||||| Sbjct: 36995997 tcctcacctaccg 36996009 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccggg 301 ||||||||||||||||||||| Sbjct: 13643890 cgccgccgccgtcgccccggg 13643870 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 280 gcgccgccgccgtcgccccgggcc 303 ||||||||||||||||| |||||| Sbjct: 33075774 gcgccgccgccgtcgccacgggcc 33075751 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 14145380 cgccgccgccgtcgccccgg 14145361
>dbj|AP003415.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1402_H07 Length = 140620 Score = 260 bits (131), Expect = 3e-66 Identities = 173/187 (92%) Strand = Plus / Plus Query: 93 aacgcggcggagaagccgcccgtcttcctgccgagctggacggggatgttcgtgctcaac 152 ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| Sbjct: 87449 aacgcggcggagaagccaccgttcttcctgccgagctggacggggatgttcgtgctcaac 87508 Query: 153 gccttcatcgtggtgtgggtgctggtggtgggcttcgggctgggcggctgggccagcatg 212 |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 87509 atgttcatcgtggtgtgggtgctcgtggtgggcttcgggctcggcggctgggccagcatg 87568 Query: 213 gtcaacttcatccgccagatcaacaccttcggcctcttcgccaagtgctaccagtgcccc 272 |||||||||||| | |||||| |||| ||||| ||||||||||||||||||||||| ||| Sbjct: 87569 gtcaacttcatcaggcagatcgacacgttcgggctcttcgccaagtgctaccagtgtccc 87628 Query: 273 aagcccg 279 ||||||| Sbjct: 87629 aagcccg 87635 Score = 121 bits (61), Expect = 2e-24 Identities = 70/73 (95%) Strand = Plus / Plus Query: 1 ccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgccctcgcccaca 60 ||||||||||||| |||||||||||||||||||||||||||||||| || |||||||||| Sbjct: 86241 ccgccgtcggcgcgctcctcgtcagcttcaccgtctacatcatcccggcactcgcccaca 86300 Query: 61 tcctcacctaccg 73 ||||||||||||| Sbjct: 86301 tcctcacctaccg 86313
>dbj|AK111659.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013151H06, full insert sequence Length = 2264 Score = 220 bits (111), Expect = 3e-54 Identities = 231/271 (85%) Strand = Plus / Plus Query: 1 ccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgccctcgcccaca 60 ||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 1624 ccgccgtcggcgcgctcctcgtcagcttcaccgtctacatcatcccctccctctcccaca 1683 Query: 61 tcctcacctaccgatccgcatccgcacgcgccaacgcggcggagaagccgcccgtcttcc 120 ||||||| ||||| ||||| ||||| | || ||||||||||||||||| |||| Sbjct: 1684 tcctcacgtaccgctccgcctccgccagattgaatgcggcggagaagccgccgccgttcc 1743 Query: 121 tgccgagctggacggggatgttcgtgctcaacgccttcatcgtggtgtgggtgctggtgg 180 |||||||||||| |||||||||||| | |||| ||| | |||| |||||||||||||| Sbjct: 1744 tgccgagctggagcgggatgttcgtggtgaacgtgttcgtggtggcgtgggtgctggtgg 1803 Query: 181 tgggcttcgggctgggcggctgggccagcatggtcaacttcatccgccagatcaacacct 240 | || ||||| || ||||||||||||||| | |||||||||| |||||| |||| | Sbjct: 1804 tcgggttcggcctcggcggctgggccagcgtcaccaacttcatcaagcagatcgacacgt 1863 Query: 241 tcggcctcttcgccaagtgctaccagtgccc 271 |||| |||||||||||||||||||||||||| Sbjct: 1864 tcgggctcttcgccaagtgctaccagtgccc 1894
>dbj|AK111849.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145B14, full insert sequence Length = 1961 Score = 212 bits (107), Expect = 7e-52 Identities = 230/271 (84%) Strand = Plus / Plus Query: 1 ccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgccctcgcccaca 60 ||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 1321 ccgccgtcggcgcgctcctcgtcagcttcaccgtctacatcatcccctccctctcccaca 1380 Query: 61 tcctcacctaccgatccgcatccgcacgcgccaacgcggcggagaagccgcccgtcttcc 120 ||||||| ||||| ||||| ||||| | || ||||||||||||||||| |||| Sbjct: 1381 tcctcacgtaccgctccgcctccgccagattgaatgcggcggagaagccgccgccgttcc 1440 Query: 121 tgccgagctggacggggatgttcgtgctcaacgccttcatcgtggtgtgggtgctggtgg 180 |||||||||||| |||||||||||| | |||| ||| | |||| |||||||||||||| Sbjct: 1441 tgccgagctggagcgggatgttcgtggtgaacgtgttcgtggtggcgtgggtgctggtgg 1500 Query: 181 tgggcttcgggctgggcggctgggccagcatggtcaacttcatccgccagatcaacacct 240 | || ||||| || |||||||||||| || | |||||||||| |||||| |||| | Sbjct: 1501 tcgggttcggcctcggcggctgggccggcgtcaccaacttcatcaagcagatcgacacgt 1560 Query: 241 tcggcctcttcgccaagtgctaccagtgccc 271 |||| |||||||||||||||||||||||||| Sbjct: 1561 tcgggctcttcgccaagtgctaccagtgccc 1591
>gb|AY109327.1| Zea mays CL468_1 mRNA sequence Length = 2907 Score = 167 bits (84), Expect = 4e-38 Identities = 135/152 (88%) Strand = Plus / Plus Query: 1 ccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgccctcgcccaca 60 ||||||||||||| || ||||||||||||||||||||||||||||| ||||| || ||| Sbjct: 1903 ccgccgtcggcgcgctgctcgtcagcttcaccgtctacatcatcccggccctggcgcacg 1962 Query: 61 tcctcacctaccgatccgcatccgcacgcgccaacgcggcggagaagccgcccgtcttcc 120 ||||||||||||| | || ||||| ||| ||||| ||||||||||||||| |||||| Sbjct: 1963 tcctcacctaccgcacggcgtccgcgcgcatgaacgccgcggagaagccgcccttcttcc 2022 Query: 121 tgccgagctggacggggatgttcgtgctcaac 152 ||||||||||||||||||||||||| |||||| Sbjct: 2023 tgccgagctggacggggatgttcgtcctcaac 2054 Score = 107 bits (54), Expect = 3e-20 Identities = 81/90 (90%) Strand = Plus / Plus Query: 188 cgggctgggcggctgggccagcatggtcaacttcatccgccagatcaacaccttcggcct 247 |||||||||||||||||||||||||||||||||| | | |||||| |||| ||||| || Sbjct: 2090 cgggctgggcggctgggccagcatggtcaacttcgtgaggcagatcgacacgttcgggct 2149 Query: 248 cttcgccaagtgctaccagtgccccaagcc 277 ||||||||||||||||||||||| ||||| Sbjct: 2150 gttcgccaagtgctaccagtgcccgaagcc 2179
>gb|AC135421.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0012G21, complete sequence Length = 135750 Score = 135 bits (68), Expect = 1e-28 Identities = 149/176 (84%) Strand = Plus / Minus Query: 96 gcggcggagaagccgcccgtcttcctgccgagctggacggggatgttcgtgctcaacgcc 155 ||||||||||||||||| |||||||||||||||| |||||||||||| | |||| Sbjct: 34726 gcggcggagaagccgccgccgttcctgccgagctggagcgggatgttcgtggtgaacgtg 34667 Query: 156 ttcatcgtggtgtgggtgctggtggtgggcttcgggctgggcggctgggccagcatggtc 215 ||| | |||| ||||||||||||||| || ||||| || ||||||||||||||| | | Sbjct: 34666 ttcgtggtggcgtgggtgctggtggtcgggttcggcctcggcggctgggccagcgtcacc 34607 Query: 216 aacttcatccgccagatcaacaccttcggcctcttcgccaagtgctaccagtgccc 271 ||||||||| |||||| |||| ||||| |||||||||||||||||||||||||| Sbjct: 34606 aacttcatcaagcagatcgacacgttcgggctcttcgccaagtgctaccagtgccc 34551 Score = 121 bits (61), Expect = 2e-24 Identities = 79/85 (92%) Strand = Plus / Minus Query: 1 ccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgccctcgcccaca 60 ||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 35531 ccgccgtcggcgcgctcctcgtcagcttcaccgtctacatcatcccctccctctcccaca 35472 Query: 61 tcctcacctaccgatccgcatccgc 85 ||||||| ||||| ||||| ||||| Sbjct: 35471 tcctcacgtaccgctccgcctccgc 35447
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Plus Query: 148 tcaacgccttcatcgtggtgtgggtgctggtggtgggcttcgggctgggcggctgggcca 207 ||||||| ||| | |||| ||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 7619562 tcaacgcgttcgtggtggcgtgggtgctggtggtcggcttcgggttcggcggctgggcca 7619621 Query: 208 gcatggtcaacttcatccgccagatcaacaccttcggcctcttcgccaagtgctaccagt 267 ||||| ||||||| ||||||||||| |||| ||||| |||||| ||||||||||||||| Sbjct: 7619622 gcatgaccaacttcgtccgccagatcgacacgttcgggctcttcaccaagtgctaccagt 7619681 Query: 268 gccc 271 |||| Sbjct: 7619682 gccc 7619685 Score = 109 bits (55), Expect = 7e-21 Identities = 73/79 (92%) Strand = Plus / Plus Query: 1 ccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgccctcgcccaca 60 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 7618652 ccgccgtcggctccctcctcgtcagcttcaccgtctacatcatccccgccctcgcgcaca 7618711 Query: 61 tcctcacctaccgatccgc 79 | |||||| ||| ||||| Sbjct: 7618712 tgatcaccttccgctccgc 7618730 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 25483046 cgccgccgccgtcgccccgg 25483027 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 13355532 cgccgccgccgtcgccccgg 13355513 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 13347607 cgccgccgccgtcgccccgg 13347588 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 4931194 cgccgccgccgtcgccccgg 4931213
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0096L14, from chromosome 3, complete sequence Length = 131142 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Minus Query: 148 tcaacgccttcatcgtggtgtgggtgctggtggtgggcttcgggctgggcggctgggcca 207 ||||||| ||| | |||| ||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 95728 tcaacgcgttcgtggtggcgtgggtgctggtggtcggcttcgggttcggcggctgggcca 95669 Query: 208 gcatggtcaacttcatccgccagatcaacaccttcggcctcttcgccaagtgctaccagt 267 ||||| ||||||| ||||||||||| |||| ||||| |||||| ||||||||||||||| Sbjct: 95668 gcatgaccaacttcgtccgccagatcgacacgttcgggctcttcaccaagtgctaccagt 95609 Query: 268 gccc 271 |||| Sbjct: 95608 gccc 95605 Score = 109 bits (55), Expect = 7e-21 Identities = 73/79 (92%) Strand = Plus / Minus Query: 1 ccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgccctcgcccaca 60 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 96638 ccgccgtcggctccctcctcgtcagcttcaccgtctacatcatccccgccctcgcgcaca 96579 Query: 61 tcctcacctaccgatccgc 79 | |||||| ||| ||||| Sbjct: 96578 tgatcaccttccgctccgc 96560
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 135 bits (68), Expect = 1e-28 Identities = 149/176 (84%) Strand = Plus / Minus Query: 96 gcggcggagaagccgcccgtcttcctgccgagctggacggggatgttcgtgctcaacgcc 155 ||||||||||||||||| |||||||||||||||| |||||||||||| | |||| Sbjct: 21782317 gcggcggagaagccgccgccgttcctgccgagctggagcgggatgttcgtggtgaacgtg 21782258 Query: 156 ttcatcgtggtgtgggtgctggtggtgggcttcgggctgggcggctgggccagcatggtc 215 ||| | |||| ||||||||||||||| || ||||| || ||||||||||||||| | | Sbjct: 21782257 ttcgtggtggcgtgggtgctggtggtcgggttcggcctcggcggctgggccagcgtcacc 21782198 Query: 216 aacttcatccgccagatcaacaccttcggcctcttcgccaagtgctaccagtgccc 271 ||||||||| |||||| |||| ||||| |||||||||||||||||||||||||| Sbjct: 21782197 aacttcatcaagcagatcgacacgttcgggctcttcgccaagtgctaccagtgccc 21782142 Score = 121 bits (61), Expect = 2e-24 Identities = 79/85 (92%) Strand = Plus / Minus Query: 1 ccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgccctcgcccaca 60 ||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct: 21783122 ccgccgtcggcgcgctcctcgtcagcttcaccgtctacatcatcccctccctctcccaca 21783063 Query: 61 tcctcacctaccgatccgcatccgc 85 ||||||| ||||| ||||| ||||| Sbjct: 21783062 tcctcacgtaccgctccgcctccgc 21783038 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 22176250 cgccgccgccgtcgccccgg 22176231 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 ccaagcccggcgccgccgccgtcg 294 ||||||||| |||||||||||||| Sbjct: 19150875 ccaagcccgccgccgccgccgtcg 19150852 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 12294734 cgccgccgccgtcgccccgg 12294753 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 12260365 cgccgccgccgtcgccccgg 12260346 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 11469538 cgccgccgccgtcgccccgg 11469557 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 11198715 cgccgccgccgtcgccccgg 11198696 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 9578368 cgccgccgccgtcgccccgg 9578349 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 9566026 cgccgccgccgtcgccccgg 9566007 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 4393481 cgccgccgccgtcgccccgg 4393462 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 4287650 cgccgccgccgtcgccccgg 4287631
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Plus Query: 148 tcaacgccttcatcgtggtgtgggtgctggtggtgggcttcgggctgggcggctgggcca 207 ||||||| ||| | |||| ||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 7617397 tcaacgcgttcgtggtggcgtgggtgctggtggtcggcttcgggttcggcggctgggcca 7617456 Query: 208 gcatggtcaacttcatccgccagatcaacaccttcggcctcttcgccaagtgctaccagt 267 ||||| ||||||| ||||||||||| |||| ||||| |||||| ||||||||||||||| Sbjct: 7617457 gcatgaccaacttcgtccgccagatcgacacgttcgggctcttcaccaagtgctaccagt 7617516 Query: 268 gccc 271 |||| Sbjct: 7617517 gccc 7617520 Score = 109 bits (55), Expect = 7e-21 Identities = 73/79 (92%) Strand = Plus / Plus Query: 1 ccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgccctcgcccaca 60 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 7616487 ccgccgtcggctccctcctcgtcagcttcaccgtctacatcatccccgccctcgcgcaca 7616546 Query: 61 tcctcacctaccgatccgc 79 | |||||| ||| ||||| Sbjct: 7616547 tgatcaccttccgctccgc 7616565 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 25574355 cgccgccgccgtcgccccgg 25574336 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 13352307 cgccgccgccgtcgccccgg 13352288 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 13344382 cgccgccgccgtcgccccgg 13344363 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 4930409 cgccgccgccgtcgccccgg 4930428
>dbj|AK103524.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033131K12, full insert sequence Length = 1964 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Plus Query: 148 tcaacgccttcatcgtggtgtgggtgctggtggtgggcttcgggctgggcggctgggcca 207 ||||||| ||| | |||| ||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 1408 tcaacgcgttcgtggtggcgtgggtgctggtggtcggcttcgggttcggcggctgggcca 1467 Query: 208 gcatggtcaacttcatccgccagatcaacaccttcggcctcttcgccaagtgctaccagt 267 ||||| ||||||| ||||||||||| |||| ||||| |||||| ||||||||||||||| Sbjct: 1468 gcatgaccaacttcgtccgccagatcgacacgttcgggctcttcaccaagtgctaccagt 1527 Query: 268 gccc 271 |||| Sbjct: 1528 gccc 1531 Score = 109 bits (55), Expect = 7e-21 Identities = 73/79 (92%) Strand = Plus / Plus Query: 1 ccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgccctcgcccaca 60 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 1261 ccgccgtcggctccctcctcgtcagcttcaccgtctacatcatccccgccctcgcgcaca 1320 Query: 61 tcctcacctaccgatccgc 79 | |||||| ||| ||||| Sbjct: 1321 tgatcaccttccgctccgc 1339
>dbj|AK101329.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034G17, full insert sequence Length = 1153 Score = 135 bits (68), Expect = 1e-28 Identities = 110/124 (88%) Strand = Plus / Plus Query: 148 tcaacgccttcatcgtggtgtgggtgctggtggtgggcttcgggctgggcggctgggcca 207 ||||||| ||| | |||| ||||||||||||||| ||||||||| | ||||||||||||| Sbjct: 616 tcaacgcgttcgtggtggcgtgggtgctggtggtcggcttcgggttcggcggctgggcca 675 Query: 208 gcatggtcaacttcatccgccagatcaacaccttcggcctcttcgccaagtgctaccagt 267 ||||| ||||||| ||||||||||| |||| ||||| |||||| ||||||||||||||| Sbjct: 676 gcatgaccaacttcgtccgccagatcgacacgttcgggctcttcaccaagtgctaccagt 735 Query: 268 gccc 271 |||| Sbjct: 736 gccc 739 Score = 109 bits (55), Expect = 7e-21 Identities = 73/79 (92%) Strand = Plus / Plus Query: 1 ccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgccctcgcccaca 60 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 469 ccgccgtcggctccctcctcgtcagcttcaccgtctacatcatccccgccctcgcgcaca 528 Query: 61 tcctcacctaccgatccgc 79 | |||||| ||| ||||| Sbjct: 529 tgatcaccttccgctccgc 547
>emb|AJ011794.1|ZMA011794 Zea mays mRNA for AUX1 protein Length = 2108 Score = 111 bits (56), Expect = 2e-21 Identities = 107/124 (86%) Strand = Plus / Plus Query: 148 tcaacgccttcatcgtggtgtgggtgctggtggtgggcttcgggctgggcggctgggcca 207 ||||| ||||| | |||| ||||||||||||||| |||||||| | || |||||||||| Sbjct: 1357 tcaactccttcgtggtggcgtgggtgctggtggtcggcttcggcttcgggggctgggcca 1416 Query: 208 gcatggtcaacttcatccgccagatcaacaccttcggcctcttcgccaagtgctaccagt 267 |||| ||||||| | | ||| |||||||||||||||||||||||||||||||||||| Sbjct: 1417 gcataaccaacttcgtgcagcaggtcaacaccttcggcctcttcgccaagtgctaccagt 1476 Query: 268 gccc 271 |||| Sbjct: 1477 gccc 1480 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 1 ccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgccctcgcccaca 60 |||||||||| | ||||||||||||||||||||||| |||||||| || ||||| |||| Sbjct: 1210 ccgccgtcgggtcgctcctcgtcagcttcaccgtctatatcatcccggcgctcgcgcaca 1269 Query: 61 t 61 | Sbjct: 1270 t 1270
>ref|NM_194844.1| Oryza sativa (japonica cultivar-group) putative AUX1-like permease (OSJNBb0016M10.2), mRNA Length = 1644 Score = 107 bits (54), Expect = 3e-20 Identities = 96/110 (87%) Strand = Plus / Plus Query: 162 gtggtgtgggtgctggtggtgggcttcgggctgggcggctgggccagcatggtcaacttc 221 |||| ||||||||||||||| |||||||| | ||||| ||||| ||||| ||||||| Sbjct: 1339 gtggcgtgggtgctggtggtcggcttcggcttcggcgggtgggcgagcatcaccaacttc 1398 Query: 222 atccgccagatcaacaccttcggcctcttcgccaagtgctaccagtgccc 271 ||| |||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 1399 gtccaccaggtcgacaccttcggcctcttcgccaagtgctaccagtgccc 1448 Score = 97.6 bits (49), Expect = 3e-17 Identities = 58/61 (95%) Strand = Plus / Plus Query: 1 ccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgccctcgcccaca 60 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 1178 ccgccgtcggctccctcctcgtcagcttcaccgtctacatcatcccctccctcgcctaca 1237 Query: 61 t 61 | Sbjct: 1238 t 1238
>gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, complete sequence Length = 118101 Score = 107 bits (54), Expect = 3e-20 Identities = 96/110 (87%) Strand = Plus / Minus Query: 162 gtggtgtgggtgctggtggtgggcttcgggctgggcggctgggccagcatggtcaacttc 221 |||| ||||||||||||||| |||||||| | ||||| ||||| ||||| ||||||| Sbjct: 10303 gtggcgtgggtgctggtggtcggcttcggcttcggcgggtgggcgagcatcaccaacttc 10244 Query: 222 atccgccagatcaacaccttcggcctcttcgccaagtgctaccagtgccc 271 ||| |||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 10243 gtccaccaggtcgacaccttcggcctcttcgccaagtgctaccagtgccc 10194 Score = 97.6 bits (49), Expect = 3e-17 Identities = 58/61 (95%) Strand = Plus / Minus Query: 1 ccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgccctcgcccaca 60 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 12287 ccgccgtcggctccctcctcgtcagcttcaccgtctacatcatcccctccctcgcctaca 12228 Query: 61 t 61 | Sbjct: 12227 t 12227
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 107 bits (54), Expect = 3e-20 Identities = 96/110 (87%) Strand = Plus / Minus Query: 162 gtggtgtgggtgctggtggtgggcttcgggctgggcggctgggccagcatggtcaacttc 221 |||| ||||||||||||||| |||||||| | ||||| ||||| ||||| ||||||| Sbjct: 2829271 gtggcgtgggtgctggtggtcggcttcggcttcggcgggtgggcgagcatcaccaacttc 2829212 Query: 222 atccgccagatcaacaccttcggcctcttcgccaagtgctaccagtgccc 271 ||| |||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 2829211 gtccaccaggtcgacaccttcggcctcttcgccaagtgctaccagtgccc 2829162 Score = 97.6 bits (49), Expect = 3e-17 Identities = 58/61 (95%) Strand = Plus / Minus Query: 1 ccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgccctcgcccaca 60 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 2831255 ccgccgtcggctccctcctcgtcagcttcaccgtctacatcatcccctccctcgcctaca 2831196 Query: 61 t 61 | Sbjct: 2831195 t 2831195 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 10548463 cgccgccgccgtcgccccgg 10548482 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgggcccctcc 308 |||||||| ||||||||||||| ||||| Sbjct: 9004328 cgccgccgtcgtcgccccgggcacctcc 9004301 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 3141313 cgccgccgccgtcgccccgg 3141332
>dbj|AK102729.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033105O21, full insert sequence Length = 2015 Score = 107 bits (54), Expect = 3e-20 Identities = 96/110 (87%) Strand = Plus / Plus Query: 162 gtggtgtgggtgctggtggtgggcttcgggctgggcggctgggccagcatggtcaacttc 221 |||| ||||||||||||||| |||||||| | ||||| ||||| ||||| ||||||| Sbjct: 1459 gtggcgtgggtgctggtggtcggcttcggcttcggcgggtgggcgagcatcaccaacttc 1518 Query: 222 atccgccagatcaacaccttcggcctcttcgccaagtgctaccagtgccc 271 ||| |||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 1519 gtccaccaggtcgacaccttcggcctcttcgccaagtgctaccagtgccc 1568 Score = 97.6 bits (49), Expect = 3e-17 Identities = 58/61 (95%) Strand = Plus / Plus Query: 1 ccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgccctcgcccaca 60 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 1298 ccgccgtcggctccctcctcgtcagcttcaccgtctacatcatcccctccctcgcctaca 1357 Query: 61 t 61 | Sbjct: 1358 t 1358
>dbj|AK102295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033089L08, full insert sequence Length = 2106 Score = 107 bits (54), Expect = 3e-20 Identities = 96/110 (87%) Strand = Plus / Plus Query: 162 gtggtgtgggtgctggtggtgggcttcgggctgggcggctgggccagcatggtcaacttc 221 |||| ||||||||||||||| |||||||| | ||||| ||||| ||||| ||||||| Sbjct: 1464 gtggcgtgggtgctggtggtcggcttcggcttcggcgggtgggcgagcatcaccaacttc 1523 Query: 222 atccgccagatcaacaccttcggcctcttcgccaagtgctaccagtgccc 271 ||| |||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 1524 gtccaccaggtcgacaccttcggcctcttcgccaagtgctaccagtgccc 1573 Score = 97.6 bits (49), Expect = 3e-17 Identities = 58/61 (95%) Strand = Plus / Plus Query: 1 ccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgccctcgcccaca 60 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 1303 ccgccgtcggctccctcctcgtcagcttcaccgtctacatcatcccctccctcgcctaca 1362 Query: 61 t 61 | Sbjct: 1363 t 1363
>dbj|AK063919.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-B07, full insert sequence Length = 1402 Score = 107 bits (54), Expect = 3e-20 Identities = 96/110 (87%) Strand = Plus / Plus Query: 162 gtggtgtgggtgctggtggtgggcttcgggctgggcggctgggccagcatggtcaacttc 221 |||| ||||||||||||||| |||||||| | ||||| ||||| ||||| ||||||| Sbjct: 773 gtggcgtgggtgctggtggtcggcttcggcttcggcgggtgggcgagcatcaccaacttc 832 Query: 222 atccgccagatcaacaccttcggcctcttcgccaagtgctaccagtgccc 271 ||| |||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 833 gtccaccaggtcgacaccttcggcctcttcgccaagtgctaccagtgccc 882
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 107 bits (54), Expect = 3e-20 Identities = 96/110 (87%) Strand = Plus / Minus Query: 162 gtggtgtgggtgctggtggtgggcttcgggctgggcggctgggccagcatggtcaacttc 221 |||| ||||||||||||||| |||||||| | ||||| ||||| ||||| ||||||| Sbjct: 2829222 gtggcgtgggtgctggtggtcggcttcggcttcggcgggtgggcgagcatcaccaacttc 2829163 Query: 222 atccgccagatcaacaccttcggcctcttcgccaagtgctaccagtgccc 271 ||| |||| || ||||||||||||||||||||||||||||||||||||| Sbjct: 2829162 gtccaccaggtcgacaccttcggcctcttcgccaagtgctaccagtgccc 2829113 Score = 97.6 bits (49), Expect = 3e-17 Identities = 58/61 (95%) Strand = Plus / Minus Query: 1 ccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgccctcgcccaca 60 ||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||| Sbjct: 2831206 ccgccgtcggctccctcctcgtcagcttcaccgtctacatcatcccctccctcgcctaca 2831147 Query: 61 t 61 | Sbjct: 2831146 t 2831146 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 10554502 cgccgccgccgtcgccccgg 10554521 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgggcccctcc 308 |||||||| ||||||||||||| ||||| Sbjct: 9009467 cgccgccgtcgtcgccccgggcacctcc 9009440 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 3141234 cgccgccgccgtcgccccgg 3141253
>gb|AF522029.1| Momordica charantia auxin influx carrier-like protein 2 (AIC2) mRNA, complete cds Length = 2787 Score = 99.6 bits (50), Expect = 7e-18 Identities = 140/170 (82%) Strand = Plus / Plus Query: 96 gcggcggagaagccgcccgtcttcctgccgagctggacggggatgttcgtgctcaacgcc 155 ||||||||||||||||| |||| || ||||||||||||| ||||| |||| | ||| | Sbjct: 2261 gcggcggagaagccgccgttctttctcccgagctggacggcgatgtacgtggtgaactgc 2320 Query: 156 ttcatcgtggtgtgggtgctggtggtgggcttcgggctgggcggctgggccagcatggtc 215 ||||| ||||||||| | ||||| || || |||||| | || || ||||||||| | | Sbjct: 2321 ttcattgtggtgtggatcctggtcgtcgggttcgggttcggagggtgggccagcgtcacc 2380 Query: 216 aacttcatccgccagatcaacaccttcggcctcttcgccaagtgctacca 265 |||||| |||| || ||| || ||||||||||||| |||||||||||||| Sbjct: 2381 aacttcgtccgacaaatcgactccttcggcctctttgccaagtgctacca 2430 Score = 77.8 bits (39), Expect = 3e-11 Identities = 60/67 (89%) Strand = Plus / Plus Query: 1 ccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgccctcgcccaca 60 |||||||||| || |||||||| |||||||||||||||||||||||| || |||||||| Sbjct: 2166 ccgccgtcggtgctctcctcgttagcttcaccgtctacatcatcccctccgccgcccaca 2225 Query: 61 tcctcac 67 | ||||| Sbjct: 2226 tgctcac 2232
>gb|AY109689.1| Zea mays CL468_2 mRNA sequence Length = 2108 Score = 79.8 bits (40), Expect = 6e-12 Identities = 40/40 (100%) Strand = Plus / Plus Query: 232 tcaacaccttcggcctcttcgccaagtgctaccagtgccc 271 |||||||||||||||||||||||||||||||||||||||| Sbjct: 1441 tcaacaccttcggcctcttcgccaagtgctaccagtgccc 1480 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 1 ccgccgtcggcgccctcctcgtcagcttcaccgtctacatcatccccgccctcgcccaca 60 |||||||||| | ||||||||||||||||||||||| |||||||| || ||||| |||| Sbjct: 1210 ccgccgtcgggtcgctcctcgtcagcttcaccgtctatatcatcccggcgctcgcgcaca 1269 Query: 61 t 61 | Sbjct: 1270 t 1270
>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0073K23 map near R10571S, complete sequence Length = 161073 Score = 73.8 bits (37), Expect = 4e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 167 gtgggtgctggtggtgggcttcgggctgggcggctgggccagcatggtcaacttcatccg 226 ||||||||| || || |||||||| | ||||| ||||| |||| |||||||||| | || Sbjct: 90805 gtgggtgctcgtcgtcggcttcggcttcggcggatgggcgagcacggtcaacttcgttcg 90864 Query: 227 ccagatcaacaccttcggcctcttcgccaagtgctaccagtgccc 271 ||| | ||||||| ||||||||| ||||||||||||||||||| Sbjct: 90865 ccaagttgacacctttggcctcttcaccaagtgctaccagtgccc 90909 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Plus Query: 16 tcctcgtcagcttcaccgtctacatcatccc 46 ||||||||||||||||||||||||||||||| Sbjct: 90654 tcctcgtcagcttcaccgtctacatcatccc 90684
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 73.8 bits (37), Expect = 4e-10 Identities = 88/105 (83%) Strand = Plus / Minus Query: 167 gtgggtgctggtggtgggcttcgggctgggcggctgggccagcatggtcaacttcatccg 226 ||||||||| || || |||||||| | ||||| ||||| |||| |||||||||| | || Sbjct: 3323489 gtgggtgctcgtcgtcggcttcggcttcggcggatgggcgagcacggtcaacttcgttcg 3323430 Query: 227 ccagatcaacaccttcggcctcttcgccaagtgctaccagtgccc 271 ||| | ||||||| ||||||||| ||||||||||||||||||| Sbjct: 3323429 ccaagttgacacctttggcctcttcaccaagtgctaccagtgccc 3323385 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 16 tcctcgtcagcttcaccgtctacatcatccc 46 ||||||||||||||||||||||||||||||| Sbjct: 3323640 tcctcgtcagcttcaccgtctacatcatccc 3323610 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 cttcggcctcttcgccaagt 258 |||||||||||||||||||| Sbjct: 28325941 cttcggcctcttcgccaagt 28325922 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 27996929 cgccgccgccgtcgccccgg 27996910 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 27951759 cgccgccgccgtcgccccgg 27951740 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 17597153 cgccgccgccgtcgccccgg 17597134 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 ccggcgccgccgccgtcgcc 296 |||||||||||||||||||| Sbjct: 3715223 ccggcgccgccgccgtcgcc 3715204
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 73.8 bits (37), Expect = 4e-10 Identities = 88/105 (83%) Strand = Plus / Minus Query: 167 gtgggtgctggtggtgggcttcgggctgggcggctgggccagcatggtcaacttcatccg 226 ||||||||| || || |||||||| | ||||| ||||| |||| |||||||||| | || Sbjct: 3332194 gtgggtgctcgtcgtcggcttcggcttcggcggatgggcgagcacggtcaacttcgttcg 3332135 Query: 227 ccagatcaacaccttcggcctcttcgccaagtgctaccagtgccc 271 ||| | ||||||| ||||||||| ||||||||||||||||||| Sbjct: 3332134 ccaagttgacacctttggcctcttcaccaagtgctaccagtgccc 3332090 Score = 61.9 bits (31), Expect = 2e-06 Identities = 31/31 (100%) Strand = Plus / Minus Query: 16 tcctcgtcagcttcaccgtctacatcatccc 46 ||||||||||||||||||||||||||||||| Sbjct: 3332345 tcctcgtcagcttcaccgtctacatcatccc 3332315 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 cttcggcctcttcgccaagt 258 |||||||||||||||||||| Sbjct: 28308390 cttcggcctcttcgccaagt 28308371 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 27971058 cgccgccgccgtcgccccgg 27971039 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 17683662 cgccgccgccgtcgccccgg 17683643 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 ccggcgccgccgccgtcgcc 296 |||||||||||||||||||| Sbjct: 3723917 ccggcgccgccgccgtcgcc 3723898
>ref|NM_129368.2| Arabidopsis thaliana AUX1 (AUXIN RESISTANT 1); amino acid permease/ transporter AT2G38120 (AUX1) mRNA, complete cds Length = 2135 Score = 69.9 bits (35), Expect = 6e-09 Identities = 101/123 (82%) Strand = Plus / Plus Query: 24 agcttcaccgtctacatcatccccgccctcgcccacatcctcacctaccgatccgcatcc 83 |||||||||||||| |||||||| | ||||| ||||| ||||| |||||||| || ||| Sbjct: 1445 agcttcaccgtctatatcatcccatctctcgctcacatgctcacttaccgatctgcctcc 1504 Query: 84 gcacgcgccaacgcggcggagaagccgcccgtcttcctgccgagctggacggggatgttc 143 || || || |||||||||||||| || |||| ||||||||||||||| ||||| | Sbjct: 1505 gctcgtcagaatgcggcggagaagccaccgttctttatgccgagctggacggcgatgtac 1564 Query: 144 gtg 146 ||| Sbjct: 1565 gtg 1567
>gb|AY093300.1| Arabidopsis thaliana unknown protein (At2g38120) mRNA, complete cds Length = 1638 Score = 69.9 bits (35), Expect = 6e-09 Identities = 101/123 (82%) Strand = Plus / Plus Query: 24 agcttcaccgtctacatcatccccgccctcgcccacatcctcacctaccgatccgcatcc 83 |||||||||||||| |||||||| | ||||| ||||| ||||| |||||||| || ||| Sbjct: 1156 agcttcaccgtctatatcatcccatctctcgctcacatgctcacttaccgatctgcctcc 1215 Query: 84 gcacgcgccaacgcggcggagaagccgcccgtcttcctgccgagctggacggggatgttc 143 || || || |||||||||||||| || |||| ||||||||||||||| ||||| | Sbjct: 1216 gctcgtcagaatgcggcggagaagccaccgttctttatgccgagctggacggcgatgtac 1275 Query: 144 gtg 146 ||| Sbjct: 1276 gtg 1278
>gb|AY054488.1| Arabidopsis thaliana Unknown protein (At2g38120; F16M14.5) mRNA, complete cds Length = 2068 Score = 69.9 bits (35), Expect = 6e-09 Identities = 101/123 (82%) Strand = Plus / Plus Query: 24 agcttcaccgtctacatcatccccgccctcgcccacatcctcacctaccgatccgcatcc 83 |||||||||||||| |||||||| | ||||| ||||| ||||| |||||||| || ||| Sbjct: 1445 agcttcaccgtctatatcatcccatctctcgctcacatgctcacttaccgatctgcctcc 1504 Query: 84 gcacgcgccaacgcggcggagaagccgcccgtcttcctgccgagctggacggggatgttc 143 || || || |||||||||||||| || |||| ||||||||||||||| ||||| | Sbjct: 1505 gctcgtcagaatgcggcggagaagccaccgttctttatgccgagctggacggcgatgtac 1564 Query: 144 gtg 146 ||| Sbjct: 1565 gtg 1567
>gb|AY087092.1| Arabidopsis thaliana clone 31586 mRNA, complete sequence Length = 2047 Score = 69.9 bits (35), Expect = 6e-09 Identities = 101/123 (82%) Strand = Plus / Plus Query: 24 agcttcaccgtctacatcatccccgccctcgcccacatcctcacctaccgatccgcatcc 83 |||||||||||||| |||||||| | ||||| ||||| ||||| |||||||| || ||| Sbjct: 1440 agcttcaccgtctatatcatcccatctctcgctcacatgctcacttaccgatctgcctcc 1499 Query: 84 gcacgcgccaacgcggcggagaagccgcccgtcttcctgccgagctggacggggatgttc 143 || || || |||||||||||||| || |||| ||||||||||||||| ||||| | Sbjct: 1500 gctcgtcagaatgcggcggagaagccaccgttctttatgccgagctggacggcgatgtac 1559 Query: 144 gtg 146 ||| Sbjct: 1560 gtg 1562
>gb|AF115543.1| Populus tremula x Populus tremuloides AUX1-like protein (LAX1) mRNA, complete cds Length = 1811 Score = 65.9 bits (33), Expect = 1e-07 Identities = 129/161 (80%) Strand = Plus / Plus Query: 102 gagaagccgcccgtcttcctgccgagctggacggggatgttcgtgctcaacgccttcatc 161 |||||||| || |||||||||| |||||||| | |||| || ||||| ||||| | Sbjct: 1300 gagaagcctcctttcttcctgccaagctggaccgccatgtatgttatcaacaccttcgtg 1359 Query: 162 gtggtgtgggtgctggtggtgggcttcgggctgggcggctgggccagcatggtcaacttc 221 |||||||||||||||||||| ||||| ||| | ||||| ||||| ||| || ||||||| Sbjct: 1360 gtggtgtgggtgctggtggttggctttgggttcggcggatgggctagcgtgaccaacttc 1419 Query: 222 atccgccagatcaacaccttcggcctcttcgccaagtgcta 262 || | ||| | |||| ||||| |||||||| |||||||| Sbjct: 1420 gtcaggcaggtggacacgttcggactcttcgcaaagtgcta 1460 Score = 46.1 bits (23), Expect = 0.090 Identities = 41/47 (87%) Strand = Plus / Plus Query: 21 gtcagcttcaccgtctacatcatccccgccctcgcccacatcctcac 67 |||||||||||||||||||| ||||| | || |||||||| ||||| Sbjct: 1219 gtcagcttcaccgtctacattatcccatctctagcccacatgctcac 1265
>gb|AY302061.1| Populus tomentosa auxin transporter protein 1 mRNA, partial cds Length = 942 Score = 58.0 bits (29), Expect = 2e-05 Identities = 128/161 (79%) Strand = Plus / Plus Query: 102 gagaagccgcccgtcttcctgccgagctggacggggatgttcgtgctcaacgccttcatc 161 |||||||| || |||||||||| |||||||| | |||| || ||||| ||||| | Sbjct: 474 gagaagcctcctttcttcctgccaagctggaccgccatgtatgttgtcaacaccttcgtg 533 Query: 162 gtggtgtgggtgctggtggtgggcttcgggctgggcggctgggccagcatggtcaacttc 221 |||||||||||||||||||| || || ||| | ||||| ||||| |||||| ||||||| Sbjct: 534 gtggtgtgggtgctggtggttggttttgggttcggcggatgggctagcatgaccaacttc 593 Query: 222 atccgccagatcaacaccttcggcctcttcgccaagtgcta 262 || | || | |||| ||||| |||||||| |||||||| Sbjct: 594 gtcaggcaagtggacacgttcgggctcttcgcaaagtgcta 634 Score = 46.1 bits (23), Expect = 0.090 Identities = 41/47 (87%) Strand = Plus / Plus Query: 21 gtcagcttcaccgtctacatcatccccgccctcgcccacatcctcac 67 |||||||||||||||||||| ||||| | || |||||||| ||||| Sbjct: 393 gtcagcttcaccgtctacattatcccatctctagcccacatgctcac 439
>gb|AY864733.1| Populus tomentosa auxin influx protein (AUX1) mRNA, complete cds Length = 1760 Score = 58.0 bits (29), Expect = 2e-05 Identities = 128/161 (79%) Strand = Plus / Plus Query: 102 gagaagccgcccgtcttcctgccgagctggacggggatgttcgtgctcaacgccttcatc 161 |||||||| || |||||||||| |||||||| | |||| || ||||| ||||| | Sbjct: 1292 gagaagcctcctttcttcctgccaagctggaccgccatgtatgttgtcaacaccttcgtg 1351 Query: 162 gtggtgtgggtgctggtggtgggcttcgggctgggcggctgggccagcatggtcaacttc 221 |||||||||||||||||||| || || ||| | ||||| ||||| |||||| ||||||| Sbjct: 1352 gtggtgtgggtgctggtggttggttttgggttcggcggatgggctagcatgaccaacttc 1411 Query: 222 atccgccagatcaacaccttcggcctcttcgccaagtgcta 262 || | || | |||| ||||| |||||||| |||||||| Sbjct: 1412 gtcaggcaagtggacacgttcgggctcttcgcaaagtgcta 1452 Score = 46.1 bits (23), Expect = 0.090 Identities = 41/47 (87%) Strand = Plus / Plus Query: 21 gtcagcttcaccgtctacatcatccccgccctcgcccacatcctcac 67 |||||||||||||||||||| ||||| | || |||||||| ||||| Sbjct: 1211 gtcagcttcaccgtctacattatcccatctctagcccacatgctcac 1257
>ref|NM_127675.2| Arabidopsis thaliana amino acid permease/ transporter AT2G21050 mRNA, complete cds Length = 1848 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 18 ctcgtcagcttcaccgtctacatcatccccgccctcgcccacatcctcacct 69 |||||||||||||| |||||||||||||| || || || |||||| |||||| Sbjct: 1331 ctcgtcagcttcactgtctacatcatcccagcactagctcacatcttcacct 1382
>gb|AY128714.1| Arabidopsis thaliana AUX1-like amino acid permease (At2g21050) mRNA, complete cds Length = 1541 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 18 ctcgtcagcttcaccgtctacatcatccccgccctcgcccacatcctcacct 69 |||||||||||||| |||||||||||||| || || || |||||| |||||| Sbjct: 1132 ctcgtcagcttcactgtctacatcatcccagcactagctcacatcttcacct 1183
>gb|AC006264.4| Arabidopsis thaliana chromosome 2 clone F26H11 map mi148, complete sequence Length = 93220 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Minus Query: 18 ctcgtcagcttcaccgtctacatcatccccgccctcgcccacatcctcacct 69 |||||||||||||| |||||||||||||| || || || |||||| |||||| Sbjct: 58937 ctcgtcagcttcactgtctacatcatcccagcactagctcacatcttcacct 58886
>gb|AY054684.1| Arabidopsis thaliana AUX1-like amino acid permease (At2g21050; F26H11.19) mRNA, complete cds Length = 1724 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 18 ctcgtcagcttcaccgtctacatcatccccgccctcgcccacatcctcacct 69 |||||||||||||| |||||||||||||| || || || |||||| |||||| Sbjct: 1166 ctcgtcagcttcactgtctacatcatcccagcactagctcacatcttcacct 1217
>emb|AJ243221.1|ATH243221 Arabidopsis thaliana LAX2 gene for putative AUX1-like permease, exons 1 to 6 Length = 2573 Score = 56.0 bits (28), Expect = 9e-05 Identities = 46/52 (88%) Strand = Plus / Plus Query: 18 ctcgtcagcttcaccgtctacatcatccccgccctcgcccacatcctcacct 69 |||||||||||||| |||||||||||||| || || || |||||| |||||| Sbjct: 1988 ctcgtcagcttcactgtctacatcatcccagcactagctcacatcttcacct 2039
>gb|AF522030.1| Momordica charantia auxin influx carrier-like protein 3 (AIC3) mRNA, complete cds Length = 2025 Score = 54.0 bits (27), Expect = 4e-04 Identities = 117/147 (79%) Strand = Plus / Plus Query: 125 gagctggacggggatgttcgtgctcaacgccttcatcgtggtgtgggtgctggtggtggg 184 ||||||||||| |||| |||| | ||| | ||||| ||| |||| | || ||||| || Sbjct: 1692 gagctggacggctatgtacgtggtgaacacattcatagtgacgtggattctcgtggttgg 1751 Query: 185 cttcgggctgggcggctgggccagcatggtcaacttcatccgccagatcaacaccttcgg 244 ||||||| | ||||| ||||||||||||| ||| |||||| ||| || | | ||| || Sbjct: 1752 cttcgggtttggcgggtgggccagcatggccaatttcatcaaccaagtcgataactttgg 1811 Query: 245 cctcttcgccaagtgctaccagtgccc 271 || || |||||||||||||||||||| Sbjct: 1812 actttttgccaagtgctaccagtgccc 1838
>gb|AF522028.1| Momordica charantia auxin influx carrier-like protein 1 (AIC1) mRNA, complete cds Length = 1866 Score = 54.0 bits (27), Expect = 4e-04 Identities = 78/95 (82%) Strand = Plus / Plus Query: 177 gtggtgggcttcgggctgggcggctgggccagcatggtcaacttcatccgccagatcaac 236 ||||| ||||||||| | ||||| ||||||||||||| ||| |||||| ||| || | Sbjct: 1414 gtggttggcttcgggtttggcgggtgggccagcatggccaatttcatcaaccaagtcgat 1473 Query: 237 accttcggcctcttcgccaagtgctaccagtgccc 271 | ||| || || || |||||||||||||||||||| Sbjct: 1474 aactttggactttttgccaagtgctaccagtgccc 1508
>gb|AC003028.3| Arabidopsis thaliana chromosome 2 clone F16M14 map ve018, complete sequence Length = 115359 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Plus Query: 24 agcttcaccgtctacatcatccccgccctcgcccacatcctcacctaccgatccgcatcc 83 |||||||||||||| |||||||| | ||||| ||||| ||||| |||||||| || ||| Sbjct: 43537 agcttcaccgtctatatcatcccatctctcgctcacatgctcacttaccgatctgcctcc 43596 Query: 84 gc 85 || Sbjct: 43597 gc 43598 Score = 46.1 bits (23), Expect = 0.090 Identities = 44/51 (86%) Strand = Plus / Plus Query: 96 gcggcggagaagccgcccgtcttcctgccgagctggacggggatgttcgtg 146 |||||||||||||| || |||| ||||||||||||||| ||||| |||| Sbjct: 44289 gcggcggagaagccaccgttctttatgccgagctggacggcgatgtacgtg 44339
>emb|X98772.1|ATAUX1 A.thaliana AUX1 gene Length = 4464 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Plus Query: 24 agcttcaccgtctacatcatccccgccctcgcccacatcctcacctaccgatccgcatcc 83 |||||||||||||| |||||||| | ||||| ||||| ||||| |||||||| || ||| Sbjct: 3281 agcttcaccgtctatatcatcccatctctcgctcacatgctcacttaccgatctgcctcc 3340 Query: 84 gc 85 || Sbjct: 3341 gc 3342 Score = 46.1 bits (23), Expect = 0.090 Identities = 44/51 (86%) Strand = Plus / Plus Query: 96 gcggcggagaagccgcccgtcttcctgccgagctggacggggatgttcgtg 146 |||||||||||||| || |||| ||||||||||||||| ||||| |||| Sbjct: 4032 gcggcggagaagccaccgttctttatgccgagctggacggcgatgtacgtg 4082
>ref|NM_202990.1| Arabidopsis thaliana unknown protein AT5G01240 transcript variant AT5G01240.2 mRNA, complete cds Length = 1695 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Plus Query: 26 cttcaccgtctacatcatccccgccctcgcccacatcctcacctaccgatccgcatccgc 85 |||||||||||| |||||||| ||| | |||||||| ||||| ||||| |||| || || Sbjct: 1066 cttcaccgtctatatcatccctgccttagcccacatgctcacgtaccgcaccgcctctgc 1125 Query: 86 acgcgccaacgcggcggagaa 106 ||| |||||||||||||| Sbjct: 1126 ccgccggaacgcggcggagaa 1146
>ref|NM_120202.3| Arabidopsis thaliana transporter AT5G01240 transcript variant AT5G01240.1 mRNA, complete cds Length = 2001 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Plus Query: 26 cttcaccgtctacatcatccccgccctcgcccacatcctcacctaccgatccgcatccgc 85 |||||||||||| |||||||| ||| | |||||||| ||||| ||||| |||| || || Sbjct: 1372 cttcaccgtctatatcatccctgccttagcccacatgctcacgtaccgcaccgcctctgc 1431 Query: 86 acgcgccaacgcggcggagaa 106 ||| |||||||||||||| Sbjct: 1432 ccgccggaacgcggcggagaa 1452
>gb|AY319517.1| Populus tomentosa auxin influx carrier protein (AUX2) mRNA, partial cds Length = 589 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 240 ttcggcctcttcgccaagtgctaccagtg 268 |||||||||||| |||||||||||||||| Sbjct: 297 ttcggcctcttcaccaagtgctaccagtg 325
>emb|BX831209.1|CNS09ZCQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS69ZA08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1745 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Plus Query: 26 cttcaccgtctacatcatccccgccctcgcccacatcctcacctaccgatccgcatccgc 85 |||||||||||| |||||||| ||| | |||||||| ||||| ||||| |||| || || Sbjct: 1374 cttcaccgtctatatcatccctgccttagcccacatgctcacgtaccgcaccgcctctgc 1433 Query: 86 acgcgccaacgcggcggagaa 106 ||| |||||||||||||| Sbjct: 1434 ccgccggaacgcggcggagaa 1454
>emb|BX830786.1|CNS09ZGE Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS22ZH06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1457 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Plus Query: 26 cttcaccgtctacatcatccccgccctcgcccacatcctcacctaccgatccgcatccgc 85 |||||||||||| |||||||| ||| | |||||||| ||||| ||||| |||| || || Sbjct: 1066 cttcaccgtctatatcatccctgccttagcccacatgctcacgtaccgcaccgcctctgc 1125 Query: 86 acgcgccaacgcggcggagaa 106 ||| |||||||||||||| Sbjct: 1126 ccgccggaacgcggcggagaa 1146
>emb|BX830652.1|CNS09ZCA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS10ZB01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1684 Score = 50.1 bits (25), Expect = 0.006 Identities = 67/81 (82%) Strand = Plus / Plus Query: 26 cttcaccgtctacatcatccccgccctcgcccacatcctcacctaccgatccgcatccgc 85 |||||||||||| |||||||| ||| | |||||||| ||||| ||||| |||| || || Sbjct: 1319 cttcaccgtctatatcatccctgccttagcccacatgctcacgtaccgcaccgcctctgc 1378 Query: 86 acgcgccaacgcggcggagaa 106 ||| |||||||||||||| Sbjct: 1379 ccgccggaacgcggcggagaa 1399
>emb|AL137189.2|ATF7J8 Arabidopsis thaliana DNA chromosome 5, BAC clone F7J8 (ESSA project) Length = 118507 Score = 48.1 bits (24), Expect = 0.023 Identities = 42/48 (87%) Strand = Plus / Plus Query: 26 cttcaccgtctacatcatccccgccctcgcccacatcctcacctaccg 73 |||||||||||| |||||||| ||| | |||||||| ||||| ||||| Sbjct: 96242 cttcaccgtctatatcatccctgccttagcccacatgctcacgtaccg 96289
>emb|AJ249442.1|ATH249442 Arabidopsis thaliana mRNA for putative AUX1-like permease (LAX1 gene) Length = 1644 Score = 48.1 bits (24), Expect = 0.023 Identities = 42/48 (87%) Strand = Plus / Plus Query: 26 cttcaccgtctacatcatccccgccctcgcccacatcctcacctaccg 73 |||||||||||| |||||||| ||| | |||||||| ||||| ||||| Sbjct: 1218 cttcaccgtctatatcatccctgccttagcccacatgctcacgtaccg 1265
>ref|XM_474575.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1527 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Minus Query: 328 gtcgtcgtcgtctcgccgccggg 350 ||||||||||||||||||||||| Sbjct: 230 gtcgtcgtcgtctcgccgccggg 208
>emb|AL109804.41|HS1009E24 Human DNA sequence from clone RP5-1009E24 on chromosome 20 Contains the 5' end of the ADAM33 gene for a disintegrin and metalloproteinase domain 33 protein, the SN gene encoding sialoadhesin, the C20orf60 gene, the C20orf27 gene, the C20orf28 gene, the CENPB gene for centromere protein B, the CDC25B gene for cell division cycle protein 25B, the C20orf29 gene, the 5' end of the gene for a novel protein (KIAA1271) and nine CpG islands, complete sequence Length = 185820 Score = 46.1 bits (23), Expect = 0.090 Identities = 26/27 (96%) Strand = Plus / Plus Query: 275 gcccggcgccgccgccgtcgccccggg 301 ||||||||||||||||| ||||||||| Sbjct: 111093 gcccggcgccgccgccgccgccccggg 111119
>ref|NM_001810.5| Homo sapiens centromere protein B, 80kDa (CENPB), mRNA Length = 2856 Score = 46.1 bits (23), Expect = 0.090 Identities = 26/27 (96%) Strand = Plus / Minus Query: 275 gcccggcgccgccgccgtcgccccggg 301 ||||||||||||||||| ||||||||| Sbjct: 184 gcccggcgccgccgccgccgccccggg 158
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 328 gtcgtcgtcgtctcgccgccggg 350 ||||||||||||||||||||||| Sbjct: 4370623 gtcgtcgtcgtctcgccgccggg 4370645 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 ccggcgccgccgccgtcgcc 296 |||||||||||||||||||| Sbjct: 34928169 ccggcgccgccgccgtcgcc 34928188 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 cccggcgccgccgccgtcgc 295 |||||||||||||||||||| Sbjct: 30248396 cccggcgccgccgccgtcgc 30248377 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 29199379 cgccgccgccgtcgccccgg 29199360 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 9689648 cgccgccgccgtcgccccgg 9689667
>emb|AL606603.3|OSJN00040 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0050N09, complete sequence Length = 127117 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 328 gtcgtcgtcgtctcgccgccggg 350 ||||||||||||||||||||||| Sbjct: 118491 gtcgtcgtcgtctcgccgccggg 118513
>gb|BC053847.1| Homo sapiens centromere protein B, 80kDa, mRNA (cDNA clone MGC:61764 IMAGE:6470289), complete cds Length = 2852 Score = 46.1 bits (23), Expect = 0.090 Identities = 26/27 (96%) Strand = Plus / Minus Query: 275 gcccggcgccgccgccgtcgccccggg 301 ||||||||||||||||| ||||||||| Sbjct: 184 gcccggcgccgccgccgccgccccggg 158
>emb|AL442113.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0806H05, complete sequence Length = 102515 Score = 46.1 bits (23), Expect = 0.090 Identities = 23/23 (100%) Strand = Plus / Plus Query: 328 gtcgtcgtcgtctcgccgccggg 350 ||||||||||||||||||||||| Sbjct: 36817 gtcgtcgtcgtctcgccgccggg 36839
>dbj|AP006075.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT46K10, TM0112, complete sequence Length = 103522 Score = 46.1 bits (23), Expect = 0.090 Identities = 44/51 (86%) Strand = Plus / Plus Query: 201 tgggccagcatggtcaacttcatccgccagatcaacaccttcggcctcttc 251 |||||||||||||||||||| || | |||||| |||| || ||||||||| Sbjct: 93172 tgggccagcatggtcaactttatacaccagattgacacttttggcctcttc 93222 Score = 46.1 bits (23), Expect = 0.090 Identities = 47/55 (85%) Strand = Plus / Plus Query: 15 ctcctcgtcagcttcaccgtctacatcatccccgccctcgcccacatcctcacct 69 ||||| ||||||||||| || ||||||||||| || || || |||||| |||||| Sbjct: 92198 ctccttgtcagcttcacagtttacatcatccctgctctggctcacatcttcacct 92252
>emb|X55039.1|HSCENPB Human hCENP-B gene for centromere autoantigen B (CENP-B) Length = 3717 Score = 46.1 bits (23), Expect = 0.090 Identities = 26/27 (96%) Strand = Plus / Minus Query: 275 gcccggcgccgccgccgtcgccccggg 301 ||||||||||||||||| ||||||||| Sbjct: 912 gcccggcgccgccgccgccgccccggg 886
>ref|NM_106418.3| Arabidopsis thaliana amino acid permease/ transporter AT1G77690 mRNA, complete cds Length = 1727 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 agcttcaccgtctacatcatccccgc 49 |||||||| ||||||||||||||||| Sbjct: 1173 agcttcactgtctacatcatccccgc 1198
>gb|AC117547.19| Mus musculus chromosome 1, clone RP23-221M20, complete sequence Length = 195598 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 257 gtgctaccagtgccccaagccc 278 |||||||||||||||||||||| Sbjct: 59004 gtgctaccagtgccccaagccc 59025
>gb|AF190880.1| Populus tremula x Populus tremuloides putative AUX1-like permease (lax2) mRNA, complete cds Length = 2174 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 21 gtcagcttcaccgtctacatcatccc 46 |||| ||||||||||||||||||||| Sbjct: 1743 gtcaccttcaccgtctacatcatccc 1768
>gb|BT008300.1| Arabidopsis thaliana At1g77690/T32E8_2 gene, complete cds Length = 1413 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 agcttcaccgtctacatcatccccgc 49 |||||||| ||||||||||||||||| Sbjct: 1150 agcttcactgtctacatcatccccgc 1175
>gb|AY127575.1| Arabidopsis thaliana putative AUX1-like permease (LAX3) gene, complete cds Length = 2475 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 agcttcaccgtctacatcatccccgc 49 |||||||| ||||||||||||||||| Sbjct: 1649 agcttcactgtctacatcatccccgc 1674
>gb|AY054266.1| Arabidopsis thaliana At1g77690/T32E8_2 mRNA, complete cds Length = 1649 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 agcttcaccgtctacatcatccccgc 49 |||||||| ||||||||||||||||| Sbjct: 1173 agcttcactgtctacatcatccccgc 1198
>emb|BX813477.1|CNS0ADGZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB19ZG11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1707 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 agcttcaccgtctacatcatccccgc 49 |||||||| ||||||||||||||||| Sbjct: 1162 agcttcactgtctacatcatccccgc 1187
>emb|BX841933.1|CNS09Y2A Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL49ZA03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 837 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 24 agcttcaccgtctacatcatccccgc 49 |||||||| ||||||||||||||||| Sbjct: 398 agcttcactgtctacatcatccccgc 423
>gb|AC012193.6|AC012193 Arabidopsis thaliana chromosome 1 BAC T32E8 genomic sequence, complete sequence Length = 82454 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Minus Query: 24 agcttcaccgtctacatcatccccgc 49 |||||||| ||||||||||||||||| Sbjct: 9068 agcttcactgtctacatcatccccgc 9043
>gb|AY937239.1| Chlamydomonas incerta plus agglutinin (SAG1) gene, partial cds Length = 13081 Score = 44.1 bits (22), Expect = 0.36 Identities = 25/26 (96%) Strand = Plus / Plus Query: 271 ccaagcccggcgccgccgccgtcgcc 296 |||||||| ||||||||||||||||| Sbjct: 8052 ccaagccctgcgccgccgccgtcgcc 8077
>gb|AC164373.4| Mus musculus chromosome 1, clone RP23-36O22, complete sequence Length = 171278 Score = 44.1 bits (22), Expect = 0.36 Identities = 22/22 (100%) Strand = Plus / Plus Query: 257 gtgctaccagtgccccaagccc 278 |||||||||||||||||||||| Sbjct: 170669 gtgctaccagtgccccaagccc 170690
>ref|NM_014982.1| Homo sapiens pecanex homolog (Drosophila) (PCNX), mRNA Length = 7690 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 cccggcgccgccgccgtcgcc 296 ||||||||||||||||||||| Sbjct: 441 cccggcgccgccgccgtcgcc 421
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 167 gtgggtgctggtggtgggctt 187 ||||||||||||||||||||| Sbjct: 1991813 gtgggtgctggtggtgggctt 1991833
>gb|DQ106274.1| Uncultured bacterium clone dl1_cl19_cn1 60 kDa chaperonin (cpn60) gene, partial cds Length = 552 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agcttcaccgtctacatcatc 44 ||||||||||||||||||||| Sbjct: 498 agcttcaccgtctacatcatc 478
>gb|AY344502.1| Streptococcus constellatus chaperonin GroEL gene, partial cds Length = 1441 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agcttcaccgtctacatcatc 44 ||||||||||||||||||||| Sbjct: 708 agcttcaccgtctacatcatc 688
>emb|AJ862887.1| Prunus avium mRNA for putative auxin influx carrier protein (lax1 gene) Length = 2004 Score = 42.1 bits (21), Expect = 1.4 Identities = 54/65 (83%) Strand = Plus / Plus Query: 148 tcaacgccttcatcgtggtgtgggtgctggtggtgggcttcgggctgggcggctgggcca 207 ||||| ||||||| || |||||||| |||||| | || |||||| | || || ||||||| Sbjct: 1569 tcaactccttcatagttgtgtgggttctggtgatcgggttcgggttcggtggatgggcca 1628 Query: 208 gcatg 212 ||||| Sbjct: 1629 gcatg 1633
>gb|AF533768.1| Cercopithecine herpesvirus 1 strain E2490, complete genome Length = 156789 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 323 gctccgtcgtcgtcgtctcgccgcc 347 ||||||||| ||||||||||||||| Sbjct: 113029 gctccgtcgccgtcgtctcgccgcc 113005
>gb|AF378196.1| Streptococcus constellatus GroES (groES) and GroEL (groEL) genes, complete cds Length = 2750 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agcttcaccgtctacatcatc 44 ||||||||||||||||||||| Sbjct: 1457 agcttcaccgtctacatcatc 1437
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 281 cgccgccgccgtcgccccggg 301 ||||||||||||||||||||| Sbjct: 760459 cgccgccgccgtcgccccggg 760479
>gb|AY123653.1| Streptococcus constellatus subsp. constellatus strain ATCC 27823 Cpn60 (cpn60) gene, partial cds Length = 552 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 agcttcaccgtctacatcatc 44 ||||||||||||||||||||| Sbjct: 498 agcttcaccgtctacatcatc 478
>gb|AF233450.1|AF233450 Homo sapiens pecanex-like protein 1 mRNA, complete cds Length = 7690 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 cccggcgccgccgccgtcgcc 296 ||||||||||||||||||||| Sbjct: 441 cccggcgccgccgccgtcgcc 421
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 322 agctccgtcgtcgtcgtctcg 342 ||||||||||||||||||||| Sbjct: 16831669 agctccgtcgtcgtcgtctcg 16831649 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 364 ggccggccggcagggaggaggcag 387 |||||||||||||| ||||||||| Sbjct: 12921025 ggccggccggcaggcaggaggcag 12921048
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 267 tgccccaagcccggcgccgccgccgtcgc 295 |||||| ||||| |||||||||||||||| Sbjct: 8691285 tgccccgagccccgcgccgccgccgtcgc 8691257 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 cccggcgccgccgccgtcgcc 296 ||||||||||||||||||||| Sbjct: 6163501 cccggcgccgccgccgtcgcc 6163521 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 tcggcgccctcctcgtcagc 26 |||||||||||||||||||| Sbjct: 29667773 tcggcgccctcctcgtcagc 29667754 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 23614281 cgccgccgccgtcgccccgg 23614262 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 18182252 cgccgccgccgtcgccccgg 18182271 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 gcccggcgccgccgccgtcg 294 |||||||||||||||||||| Sbjct: 10112507 gcccggcgccgccgccgtcg 10112526 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 acgcggcggagaagccgccc 113 |||||||||||||||||||| Sbjct: 5746313 acgcggcggagaagccgccc 5746332
>dbj|AP003329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1045F02 Length = 215378 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccggg 301 ||||||||||||||||||||| Sbjct: 197850 cgccgccgccgtcgccccggg 197830
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 163 tggtgtgggtgctggtggtgg 183 ||||||||||||||||||||| Sbjct: 440296 tggtgtgggtgctggtggtgg 440316
>dbj|AP004993.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0037N01 Length = 174085 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 267 tgccccaagcccggcgccgccgccgtcgc 295 |||||| ||||| |||||||||||||||| Sbjct: 106267 tgccccgagccccgcgccgccgccgtcgc 106239
>dbj|AP003336.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1151H08 Length = 123001 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccggg 301 ||||||||||||||||||||| Sbjct: 49128 cgccgccgccgtcgccccggg 49108
>dbj|AP005559.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1163_C07 Length = 107121 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 322 agctccgtcgtcgtcgtctcg 342 ||||||||||||||||||||| Sbjct: 29360 agctccgtcgtcgtcgtctcg 29340
>dbj|AP003488.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0436F11 Length = 165550 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 cccggcgccgccgccgtcgcc 296 ||||||||||||||||||||| Sbjct: 77320 cccggcgccgccgccgtcgcc 77340
>ref|XM_310529.2| Anopheles gambiae str. PEST ENSANGP00000017311 (ENSANGG00000014822), partial mRNA Length = 1263 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 361 accggccggccggcagggaggaggc 385 |||||||||||||| |||||||||| Sbjct: 272 accggccggccggctgggaggaggc 296
>dbj|AK104933.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C08, full insert sequence Length = 1326 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 agctccgtcgtcgtcgtctcg 342 ||||||||||||||||||||| Sbjct: 1148 agctccgtcgtcgtcgtctcg 1168
>gb|AC004825.2|AC004825 Homo sapiens PAC clone RP1-292L20 from 14q24.3, complete sequence Length = 124221 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 276 cccggcgccgccgccgtcgcc 296 ||||||||||||||||||||| Sbjct: 64974 cccggcgccgccgccgtcgcc 64994
>dbj|AK065039.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001H16, full insert sequence Length = 1414 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 agctccgtcgtcgtcgtctcg 342 ||||||||||||||||||||| Sbjct: 1138 agctccgtcgtcgtcgtctcg 1158
>dbj|AB096160.1| Cercopithecine herpesvirus 1 DNA, UL region, complete sequence Length = 106873 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 323 gctccgtcgtcgtcgtctcgccgcc 347 ||||||||| ||||||||||||||| Sbjct: 103914 gctccgtcgccgtcgtctcgccgcc 103890
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 169 gggtgctggtggtgggcttcgggct 193 ||||||||| ||||||||||||||| Sbjct: 505727 gggtgctggaggtgggcttcgggct 505751
>dbj|AB023212.1| Homo sapiens mRNA for KIAA0995 protein, partial cds Length = 4410 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 cccggcgccgccgccgtcgcc 296 ||||||||||||||||||||| Sbjct: 441 cccggcgccgccgccgtcgcc 421
>gb|AY835628.1| Lactobacillus salivarius subsp. salicinius 60 kDa chaperonin (cpn60) gene, partial cds Length = 552 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gcttcaccgtctacatcatc 44 |||||||||||||||||||| Sbjct: 497 gcttcaccgtctacatcatc 478
>ref|XM_474404.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1116 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 ccggcgccgccgccgtcgcc 296 |||||||||||||||||||| Sbjct: 31 ccggcgccgccgccgtcgcc 50
>ref|XM_467280.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1368 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 cccggcgccgccgccgtcgc 295 |||||||||||||||||||| Sbjct: 905 cccggcgccgccgccgtcgc 886
>ref|XM_506903.1| PREDICTED Oryza sativa (japonica cultivar-group), B1053A04.26-1 mRNA Length = 1395 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 cccggcgccgccgccgtcgc 295 |||||||||||||||||||| Sbjct: 907 cccggcgccgccgccgtcgc 888
>ref|XM_465682.1| Oryza sativa (japonica cultivar-group), mRNA Length = 699 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 388 cgccgccgccgtcgccccgg 369
>ref|NM_196024.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0058E19.20), mRNA Length = 765 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 323 cgccgccgccgtcgccccgg 304
>ref|XM_463473.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1557 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 280 gcgccgccgccgtcgccccgggcc 303 ||||||||||||||||| |||||| Sbjct: 206 gcgccgccgccgtcgccacgggcc 183
>gb|AC120539.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0063D09 map S1559, complete sequence Length = 190721 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 ccggcgccgccgccgtcgcc 296 |||||||||||||||||||| Sbjct: 82895 ccggcgccgccgccgtcgcc 82876
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 cttcggcctcttcgccaagt 258 |||||||||||||||||||| Sbjct: 52679 cttcggcctcttcgccaagt 52660
>gb|AC111016.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1651_D06, complete sequence Length = 145323 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 19515 cgccgccgccgtcgccccgg 19496
>gb|AC131966.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0028C16, complete sequence Length = 151030 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 4188 cgccgccgccgtcgccccgg 4207
>gb|AC083945.3| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBa0058E19, complete sequence Length = 147706 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 132388 cgccgccgccgtcgccccgg 132369
>gb|AF098999.2| Caenorhabditis elegans cosmid W04C9, complete sequence Length = 34643 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 ccctcctcgtcagcttcaccgtct 36 |||||||||||| ||||||||||| Sbjct: 790 ccctcctcgtcatcttcaccgtct 767
>gb|AC136228.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0672D07, complete sequence Length = 136465 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 42257 cgccgccgccgtcgccccgg 42238
>gb|AC135426.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0617A08, complete sequence Length = 144781 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 15105 cgccgccgccgtcgccccgg 15086
>gb|AC137759.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0008H02, complete sequence Length = 143438 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 97649 cgccgccgccgtcgccccgg 97630
>gb|AC136229.3| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0690B12, complete sequence Length = 135323 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 39032 cgccgccgccgtcgccccgg 39051
>gb|AC137610.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0018H09, complete sequence Length = 155329 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 100969 cgccgccgccgtcgccccgg 100950
>ref|XM_613971.2| PREDICTED: Bos taurus similar to ubiquitin specific protease 38 (LOC534262), mRNA Length = 4748 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgggccc 304 ||||||||||| |||||||||||| Sbjct: 420 cgccgccgccgccgccccgggccc 397
>gb|AC135916.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0088M06, from chromosome 5, complete sequence Length = 150099 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 87051 cgccgccgccgtcgccccgg 87032 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 74709 cgccgccgccgtcgccccgg 74690
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 cccggcgccgccgccgtcgc 295 |||||||||||||||||||| Sbjct: 2034922 cccggcgccgccgccgtcgc 2034941
>gb|AC134932.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0092G21, complete sequence Length = 151267 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 ccaagcccggcgccgccgccgtcg 294 ||||||||| |||||||||||||| Sbjct: 72773 ccaagcccgccgccgccgccgtcg 72750
>gb|DQ106374.1| Uncultured bacterium clone pi1_cl12_cn1 60 kDa chaperonin (cpn60) gene, partial cds Length = 552 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gcttcaccgtctacatcatc 44 |||||||||||||||||||| Sbjct: 497 gcttcaccgtctacatcatc 478
>gb|DQ106333.1| Uncultured bacterium clone mj0_cl2_cn2 60 kDa chaperonin (cpn60) gene, partial cds Length = 552 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gcttcaccgtctacatcatc 44 |||||||||||||||||||| Sbjct: 497 gcttcaccgtctacatcatc 478
>gb|DQ106238.1| Uncultured bacterium clone dl0_cl2_cn4 60 kDa chaperonin (cpn60) gene, partial cds Length = 552 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gcttcaccgtctacatcatc 44 |||||||||||||||||||| Sbjct: 497 gcttcaccgtctacatcatc 478
>gb|DQ106236.1| Uncultured bacterium clone dl0_cl2_cn1 60 kDa chaperonin (cpn60) gene, partial cds Length = 552 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gcttcaccgtctacatcatc 44 |||||||||||||||||||| Sbjct: 497 gcttcaccgtctacatcatc 478
>gb|AC144736.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0008E07, complete sequence Length = 146679 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 62212 cgccgccgccgtcgccccgg 62231 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 27843 cgccgccgccgtcgccccgg 27824
>gb|AC144452.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0025G07, complete sequence Length = 167136 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 137477 cgccgccgccgtcgccccgg 137458
>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome Length = 138390 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 277 ccggcgccgccgccgtcgccccgg 300 |||||||||||| ||||||||||| Sbjct: 50103 ccggcgccgccggcgtcgccccgg 50126 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 cccggcgccgccgccgtcgc 295 |||||||||||||||||||| Sbjct: 10607 cccggcgccgccgccgtcgc 10626
>gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0064E16, complete sequence Length = 159092 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 64353 cgccgccgccgtcgccccgg 64334
>gb|AC112521.4| Mus musculus BAC clone RP23-186C6 from 9, complete sequence Length = 230334 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 cagatcaacaccttcggcct 247 |||||||||||||||||||| Sbjct: 195373 cagatcaacaccttcggcct 195392
>gb|AC126224.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0078O24, complete sequence Length = 135980 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 52403 cgccgccgccgtcgccccgg 52384 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 44478 cgccgccgccgtcgccccgg 44459
>emb|Z97634.26|HS367G8 Human DNA sequence from clone LA16c-367G8 on chromosome 16 Contains the MRPL28 gene for mitochondrial ribosomal protein L28, the TMEM8 gene for transmembrane protein 8 (five membrane-spanning domains), a novel gene, a ribosomal protein L23a (RPL23A) pseudogene, the NME4 gene for non-metastatic cells 4 protein expressed in and six CpG islands, complete sequence Length = 34971 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 ccgccgccgtcgccccgggc 302 |||||||||||||||||||| Sbjct: 16073 ccgccgccgtcgccccgggc 16092
>ref|XM_502563.1| Yarrowia lipolytica CLIB122, YALI0D08206g predicted mRNA Length = 1710 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 aacaccttcggcctcttcgccaag 257 |||||| ||||||||||||||||| Sbjct: 529 aacaccgtcggcctcttcgccaag 552
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 cggcgccgccgccgtcgccc 297 |||||||||||||||||||| Sbjct: 1603717 cggcgccgccgccgtcgccc 1603736
>emb|AL035703.21|HS61A9 Human DNA sequence from clone RP1-61A9 on chromosome 1p35.2-36.13 Contains a novel gene (KIAA0478) and the EPHA8 gene for ephrin receptor EphA8 precursor, complete sequence Length = 160705 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 275 gcccggcgccgccgccgtcgccccgggc 302 ||||| ||||||||||| |||||||||| Sbjct: 65808 gcccgccgccgccgccgccgccccgggc 65835
>emb|AL031347.1|HS596H12 Human DNA sequence from clone RP4-596H12 on chromosome 6p22.2-22.3, complete sequence Length = 175555 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 cagcatggtcaacttcatcc 225 |||||||||||||||||||| Sbjct: 13163 cagcatggtcaacttcatcc 13144
>gb|BC097970.1| Rattus norvegicus similar to mitochondrial translational release factor 1-like, mRNA (cDNA clone MGC:116100 IMAGE:7442024), complete cds Length = 1264 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 tgggcggctgggccagcatg 212 |||||||||||||||||||| Sbjct: 48 tgggcggctgggccagcatg 67
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 cccggcgccgccgccgtcgc 295 |||||||||||||||||||| Sbjct: 196512 cccggcgccgccgccgtcgc 196531
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 213325 cgccgccgccgtcgccccgg 213306
>emb|AL663002.3|OSJN00199 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026I12, complete sequence Length = 128574 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 21854 cgccgccgccgtcgccccgg 21873
>emb|AL606624.4|OSJN00058 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011J08, complete sequence Length = 157734 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 108838 cgccgccgccgtcgccccgg 108819
>emb|AL606688.3|OSJN00086 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064M23, complete sequence Length = 149892 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 2425 cgccgccgccgtcgccccgg 2406
>emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032F06, complete sequence Length = 148023 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 ccggcgccgccgccgtcgcc 296 |||||||||||||||||||| Sbjct: 134282 ccggcgccgccgccgtcgcc 134301
>emb|AJ279036.1|CDA279036 Cynodon dactylon (L.) Pers. partial mRNA for putative C4 phosphoenolpyruvate carboxylase (c4 PEPCase gene) Length = 1170 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 217 acttcatccgccagatcaacaccttcgg 244 |||||||||||||| ||||||| ||||| Sbjct: 788 acttcatccgccaggtcaacacattcgg 815
>ref|NM_001025723.1| Rattus norvegicus similar to mitochondrial translational release factor 1-like (LOC361473), mRNA Length = 1264 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 tgggcggctgggccagcatg 212 |||||||||||||||||||| Sbjct: 48 tgggcggctgggccagcatg 67
>gb|AE006463.1| Homo sapiens 16p13.3 sequence section 2 of 8 Length = 260418 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 ccgccgccgtcgccccgggc 302 |||||||||||||||||||| Sbjct: 114549 ccgccgccgtcgccccgggc 114568
>gb|AC093093.5| Oryza sativa chromosome 10 BAC OSJNBb0076H04 genomic sequence, complete sequence Length = 141050 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 10498 cgccgccgccgtcgccccgg 10479
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 cggcgccgccgccgtcgccc 297 |||||||||||||||||||| Sbjct: 391036 cggcgccgccgccgtcgccc 391055
>dbj|AK091823.1| Homo sapiens cDNA FLJ34504 fis, clone HLUNG2005774, highly similar to Homo sapiens mRNA for M83 protein Length = 2346 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 283 ccgccgccgtcgccccgggc 302 |||||||||||||||||||| Sbjct: 23 ccgccgccgtcgccccgggc 4
>gb|AC010325.7| Homo sapiens chromosome 19 clone CTD-2568A17, complete sequence Length = 166439 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 372 ggcagggaggaggcagccgg 391 |||||||||||||||||||| Sbjct: 50992 ggcagggaggaggcagccgg 50973
>dbj|AK091020.1| Homo sapiens cDNA FLJ33701 fis, clone BRAWH2005524 Length = 2736 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 catcgtggtgtgggtgctgg 177 |||||||||||||||||||| Sbjct: 513 catcgtggtgtgggtgctgg 494
>gb|AE011901.1| Xanthomonas axonopodis pv. citri str. 306, section 279 of 469 of the complete genome Length = 10146 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gctggtggtgggcttcgggc 192 |||||||||||||||||||| Sbjct: 5730 gctggtggtgggcttcgggc 5711
>gb|AC098565.3| Oryza sativa chromosome 10 clone OSJNBa0028C16, complete sequence Length = 166757 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 110945 cgccgccgccgtcgccccgg 110964
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 2697857 cgccgccgccgtcgccccgg 2697838
>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome Length = 3570858 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 gttcgtgctcaacgccttcatcgt 163 |||||||||| ||||||||||||| Sbjct: 3295550 gttcgtgctctacgccttcatcgt 3295573
>ref|NM_058333.2| Caenorhabditis elegans W04C9.4 (W04C9.4) mRNA, complete cds Length = 548 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 ccctcctcgtcagcttcaccgtct 36 |||||||||||| ||||||||||| Sbjct: 431 ccctcctcgtcatcttcaccgtct 408
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 cccggcgccgccgccgtcgc 295 |||||||||||||||||||| Sbjct: 2128465 cccggcgccgccgccgtcgc 2128446
>gb|DQ267106.1| Triticum urartu clone BAC 210J24 chromosome 4A, complete sequence Length = 111912 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 239 cttcggcctcttcgccaagtgcta 262 ||||||| |||||||||||||||| Sbjct: 85972 cttcggcatcttcgccaagtgcta 85949
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 175 tggtggtgggcttcgggctg 194 |||||||||||||||||||| Sbjct: 51492 tggtggtgggcttcgggctg 51473
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 11637427 cgccgccgccgtcgccccgg 11637408
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 cccggcgccgccgccgtcgc 295 |||||||||||||||||||| Sbjct: 28642624 cccggcgccgccgccgtcgc 28642605 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 16770459 cgccgccgccgtcgccccgg 16770440
>emb|BX819654.1|CNS0AA21 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS11ZG12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1827 Score = 40.1 bits (20), Expect = 5.6 Identities = 44/52 (84%) Strand = Plus / Plus Query: 18 ctcgtcagcttcaccgtctacatcatccccgccctcgcccacatcctcacct 69 |||||||||||| | || ||||||||||| || || || |||||| |||||| Sbjct: 1282 ctcgtcagcttcgctgtgtacatcatcccagcactagctcacatcttcacct 1333
>dbj|AP003368.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1100D10 Length = 152997 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 280 gcgccgccgccgtcgccccgggcc 303 ||||||||||||||||| |||||| Sbjct: 12684 gcgccgccgccgtcgccacgggcc 12661
>gb|AC135600.3| Oryza sativa chromosome 3 BAC OSJNBb0047K21 genomic sequence, complete sequence Length = 117046 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 51806 cgccgccgccgtcgccccgg 51825
>gb|AC119147.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0027A14, from chromosome 10, complete sequence Length = 175667 Score = 40.1 bits (20), Expect = 5.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgggcccctcc 308 |||||||| ||||||||||||| ||||| Sbjct: 92551 cgccgccgtcgtcgccccgggcacctcc 92524
>dbj|AP005859.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1053A04 Length = 144321 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 cccggcgccgccgccgtcgc 295 |||||||||||||||||||| Sbjct: 106637 cccggcgccgccgccgtcgc 106618
>dbj|AP005463.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0712G01 Length = 87056 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 tcggcgccctcctcgtcagc 26 |||||||||||||||||||| Sbjct: 40887 tcggcgccctcctcgtcagc 40868
>dbj|AP004329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1663_H12 Length = 125422 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 tcggcgccctcctcgtcagc 26 |||||||||||||||||||| Sbjct: 111358 tcggcgccctcctcgtcagc 111339
>dbj|AP004791.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0491D10 Length = 162039 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 gcccggcgccgccgccgtcg 294 |||||||||||||||||||| Sbjct: 78873 gcccggcgccgccgccgtcg 78892
>dbj|AP006553.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0061G23 Length = 144220 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 62624 cgccgccgccgtcgccccgg 62643
>dbj|AP003224.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0010B10 Length = 155263 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 280 gcgccgccgccgtcgccccgggcc 303 ||||||||||||||||| |||||| Sbjct: 142002 gcgccgccgccgtcgccacgggcc 141979
>dbj|AP003369.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1102E12 Length = 155692 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 85094 cgccgccgccgtcgccccgg 85075
>dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0701E03 Length = 183245 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 acgcggcggagaagccgccc 113 |||||||||||||||||||| Sbjct: 61842 acgcggcggagaagccgccc 61861
>dbj|AP003629.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481H08 Length = 146841 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 95245 cgccgccgccgtcgccccgg 95226
>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021C04 Length = 162115 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 94 acgcggcggagaagccgccc 113 |||||||||||||||||||| Sbjct: 138460 acgcggcggagaagccgccc 138479
>dbj|AP005312.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0505H05 Length = 152845 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 364 ggccggccggcagggaggaggcag 387 |||||||||||||| ||||||||| Sbjct: 83009 ggccggccggcaggcaggaggcag 83032
>dbj|AP005820.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0091C16 Length = 162527 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 147514 cgccgccgccgtcgccccgg 147495
>dbj|AP004302.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1122_H01 Length = 103030 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 18701 cgccgccgccgtcgccccgg 18682
>dbj|AK121236.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023094P08, full insert sequence Length = 2301 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 tcggcgccctcctcgtcagc 26 |||||||||||||||||||| Sbjct: 417 tcggcgccctcctcgtcagc 398
>dbj|AK106642.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-113-E06, full insert sequence Length = 2214 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 ccggcgccgccgccgtcgcc 296 |||||||||||||||||||| Sbjct: 67 ccggcgccgccgccgtcgcc 86
>dbj|AK105871.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-B01, full insert sequence Length = 1666 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 ccggcgccgccgccgtcgcc 296 |||||||||||||||||||| Sbjct: 50 ccggcgccgccgccgtcgcc 69
>dbj|AK105864.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-A05, full insert sequence Length = 1368 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 cccggcgccgccgccgtcgc 295 |||||||||||||||||||| Sbjct: 905 cccggcgccgccgccgtcgc 886
>dbj|AK102938.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114J20, full insert sequence Length = 1223 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 cttcggcctcttcgccaagt 258 |||||||||||||||||||| Sbjct: 212 cttcggcctcttcgccaagt 231
>dbj|AK101915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033071H14, full insert sequence Length = 1394 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 cccggcgccgccgccgtcgc 295 |||||||||||||||||||| Sbjct: 906 cccggcgccgccgccgtcgc 887
>dbj|AK071538.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099G11, full insert sequence Length = 1384 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 277 ccggcgccgccgccgtcgcc 296 |||||||||||||||||||| Sbjct: 70 ccggcgccgccgccgtcgcc 89
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 329 tcgtcgtcgtctcgccgccg 348 |||||||||||||||||||| Sbjct: 2396543 tcgtcgtcgtctcgccgccg 2396524
>dbj|AK060049.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-H12, full insert sequence Length = 1173 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 cttcggcctcttcgccaagt 258 |||||||||||||||||||| Sbjct: 256 cttcggcctcttcgccaagt 275
>gb|AY562906.1| Uncultured bacterium clone w09_a07 60 kDa chaperonin (cpn60) gene, partial cds Length = 552 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gcttcaccgtctacatcatc 44 |||||||||||||||||||| Sbjct: 497 gcttcaccgtctacatcatc 478
>gb|AY562865.1| Uncultured bacterium clone c13_g08 60 kDa chaperonin (cpn60) gene, partial cds Length = 552 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 gcttcaccgtctacatcatc 44 |||||||||||||||||||| Sbjct: 497 gcttcaccgtctacatcatc 478
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 278 cggcgccgccgccgtcgccc 297 |||||||||||||||||||| Sbjct: 389354 cggcgccgccgccgtcgccc 389373
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 ccgtcgtcgtcgtctcgccg 345 |||||||||||||||||||| Sbjct: 219906 ccgtcgtcgtcgtctcgccg 219887
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 11637098 cgccgccgccgtcgccccgg 11637079
>emb|AL772424.5|CNS08CA2 Oryza sativa chromosome 12, . BAC OJ1118_B01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 108927 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 281 cgccgccgccgtcgccccgg 300 |||||||||||||||||||| Sbjct: 23401 cgccgccgccgtcgccccgg 23420
>emb|AL607004.4|OSJN00129 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNba0093F12, complete sequence Length = 186142 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 cccggcgccgccgccgtcgc 295 |||||||||||||||||||| Sbjct: 144690 cccggcgccgccgccgtcgc 144671
>gb|AC004490.1|AC004490 Homo sapiens chromosome 19, cosmid R29381, complete sequence Length = 39143 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 catcgtggtgtgggtgctgg 177 |||||||||||||||||||| Sbjct: 33070 catcgtggtgtgggtgctgg 33089
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 234 aacaccttcggcctcttcgccaag 257 |||||| ||||||||||||||||| Sbjct: 1048767 aacaccgtcggcctcttcgccaag 1048744
>emb|AL833801.9| Mouse DNA sequence from clone RP23-414F8 on chromosome 2, complete sequence Length = 135879 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 187 tcgggctgggcggctgggccagca 210 |||||||||||||| ||||||||| Sbjct: 55136 tcgggctgggcggcagggccagca 55159
>gb|AC116456.12| Homo sapiens chromosome 11, clone RP11-236J17, complete sequence Length = 146502 Score = 40.1 bits (20), Expect = 5.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 268 gccccaagcccggcgccgccgccg 291 ||||||||||| |||||||||||| Sbjct: 46688 gccccaagcccagcgccgccgccg 46711
>gb|M93015.1|PDENQOUVR Paracoccus denitrificans DNA repair protein (uvrA) gene, 3' end, and NADH dehydrogenase (NQO4, NQO5, NQO6, NQO7) genes, complete cds Length = 3739 Score = 40.1 bits (20), Expect = 5.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 ggcgccgccgccgtcgcccc 298 |||||||||||||||||||| Sbjct: 228 ggcgccgccgccgtcgcccc 209 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,452,916 Number of Sequences: 3902068 Number of extensions: 3452916 Number of successful extensions: 118992 Number of sequences better than 10.0: 200 Number of HSP's better than 10.0 without gapping: 229 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 109458 Number of HSP's gapped (non-prelim): 9511 length of query: 415 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 393 effective length of database: 17,147,199,772 effective search space: 6738849510396 effective search space used: 6738849510396 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
