ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast76a03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ERF3_TOBAC (Q9SXS8) Ethylene-responsive transcription factor 3 (... 41 0.001
2ERF7_ARATH (Q9LDE4) Ethylene-responsive transcription factor 7 (... 40 0.002
3ERF3_ARATH (O80339) Ethylene-responsive transcription factor 3 (... 37 0.011
4ERF8_ARATH (Q9MAI5) Ethylene-responsive transcription factor 8 (... 37 0.014
5ERF4_ARATH (O80340) Ethylene-responsive transcription factor 4 (... 37 0.014
6ERF9_ARATH (Q9FE67) Ethylene-responsive transcription factor 9 (... 37 0.018
7ERF14_ARATH (P93822) Ethylene-responsive transcription factor 14... 37 0.018
8ERF10_ARATH (Q9ZWA2) Ethylene-responsive transcription factor 10... 36 0.024
9ERF4_NICSY (Q9LW49) Ethylene-responsive transcription factor 4 (... 36 0.024
10ERF11_ARATH (Q9C5I3) Ethylene-responsive transcription factor 11... 36 0.024
11ERF4_TOBAC (Q40477) Ethylene-responsive transcription factor 4 (... 36 0.024
12ERF12_ARATH (Q94ID6) Ethylene-responsive transcription factor 12... 35 0.041
13PTI5_LYCES (O04681) Pathogenesis-related genes transcriptional a... 33 0.27
14PTI6_LYCES (O04682) Pathogenesis-related genes transcriptional a... 33 0.27
15ERF15_ARATH (Q8VYM0) Ethylene-responsive transcription factor 15... 32 0.35
16ERF1B_ARATH (Q8LDC8) Ethylene-responsive transcription factor 1B... 32 0.59
17ERF13_ARATH (Q8L9K1) Ethylene-responsive transcription factor 13... 31 1.0
18AP23_ARATH (P42736) AP2 domain transcription factor RAP2.3 (Rela... 31 1.0
19ERF1_TOBAC (Q40476) Ethylene-responsive transcription factor 1 (... 30 1.3
20ERF5_NICSY (Q9LW48) Ethylene-responsive transcription factor 5 (... 30 1.7
21ERF2_ARATH (O80338) Ethylene-responsive transcription factor 2 (... 30 1.7
22ERF2_TOBAC (Q40479) Ethylene-responsive transcription factor 2 (... 30 1.7
23ERF2_NICSY (Q9LW50) Ethylene-responsive transcription factor 2 (... 30 1.7
24ERF1_LYCES (Q84XB3) Ethylene-responsive transcription factor 1 (... 30 1.7
25ERF1A_ARATH (O80337) Ethylene-responsive transcription factor 1A... 30 1.7
26ERF5_ARATH (O80341) Ethylene-responsive transcription factor 5 (... 30 1.7
27ERF5_TOBAC (Q40478) Ethylene-responsive transcription factor 5 (... 30 1.7
28ERF6_ARATH (Q8VZ91) Ethylene-responsive transcription factor 6 (... 29 2.9
29TINY_ARATH (Q39127) Transcriptional factor TINY 28 5.0
30DRE2E_ARATH (O80917) Dehydration-responsive element-binding prot... 28 5.0

>ERF3_TOBAC (Q9SXS8) Ethylene-responsive transcription factor 3|
           (Ethylene-responsive element-binding factor 3 homolog)
           (EREBP-5) (NtERF5)
          Length = 225

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 17/21 (80%), Positives = 18/21 (85%)
 Frame = +3

Query: 144 GGGMEPRFRGVRKRPWGRYAA 206
           GG  E RFRGVRKRPWGR+AA
Sbjct: 21  GGSKEIRFRGVRKRPWGRFAA 41



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>ERF7_ARATH (Q9LDE4) Ethylene-responsive transcription factor 7|
           (Ethylene-responsive element-binding factor 7) (EREBP-7)
           (AtERF7)
          Length = 244

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 16/21 (76%), Positives = 18/21 (85%)
 Frame = +3

Query: 144 GGGMEPRFRGVRKRPWGRYAA 206
           G   EPR+RGVRKRPWGR+AA
Sbjct: 20  GSVKEPRYRGVRKRPWGRFAA 40



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>ERF3_ARATH (O80339) Ethylene-responsive transcription factor 3|
           (Ethylene-responsive element-binding factor 3) (EREBP-3)
           (AtERF3)
          Length = 225

 Score = 37.4 bits (85), Expect = 0.011
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = +3

Query: 144 GGGMEPRFRGVRKRPWGRYAA 206
           G   E RFRGVRKRPWGR+AA
Sbjct: 21  GSVKEIRFRGVRKRPWGRFAA 41



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>ERF8_ARATH (Q9MAI5) Ethylene-responsive transcription factor 8|
           (Ethylene-responsive element-binding factor 8) (EREBP-8)
           (AtERF8)
          Length = 185

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +3

Query: 156 EPRFRGVRKRPWGRYAA 206
           E R+RGVRKRPWGRYAA
Sbjct: 28  EIRYRGVRKRPWGRYAA 44



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>ERF4_ARATH (O80340) Ethylene-responsive transcription factor 4|
           (Ethylene-responsive element-binding factor 4) (Related
           to APETALA-2 protein 5) (EREBP-4) (AtERF4)
          Length = 222

 Score = 37.0 bits (84), Expect = 0.014
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +3

Query: 156 EPRFRGVRKRPWGRYAA 206
           E R+RGVRKRPWGRYAA
Sbjct: 22  EIRYRGVRKRPWGRYAA 38



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>ERF9_ARATH (Q9FE67) Ethylene-responsive transcription factor 9|
           (Ethylene-responsive element-binding factor 9) (EREBP-9)
           (AtERF9)
          Length = 200

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = +3

Query: 156 EPRFRGVRKRPWGRYAA 206
           E  FRGVRKRPWGRYAA
Sbjct: 30  EVHFRGVRKRPWGRYAA 46



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>ERF14_ARATH (P93822) Ethylene-responsive transcription factor 14|
           (Ethylene-responsive element-binding factor 14)
           (EREBP-14) (AtERF14)
          Length = 133

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 13/21 (61%), Positives = 18/21 (85%)
 Frame = +3

Query: 144 GGGMEPRFRGVRKRPWGRYAA 206
           GG  + ++RGVR+RPWG+YAA
Sbjct: 13  GGAEQGKYRGVRRRPWGKYAA 33



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>ERF10_ARATH (Q9ZWA2) Ethylene-responsive transcription factor 10|
           (Ethylene-responsive element-binding factor 10)
           (EREBP-10) (AtERF10)
          Length = 245

 Score = 36.2 bits (82), Expect = 0.024
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +3

Query: 156 EPRFRGVRKRPWGRYAA 206
           E R+RGVR+RPWGRYAA
Sbjct: 50  EVRYRGVRRRPWGRYAA 66



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>ERF4_NICSY (Q9LW49) Ethylene-responsive transcription factor 4|
           (Ethylene-responsive element-binding factor 4 homolog)
           (EREBP-3) (NsERF3)
          Length = 227

 Score = 36.2 bits (82), Expect = 0.024
 Identities = 15/20 (75%), Positives = 16/20 (80%)
 Frame = +3

Query: 147 GGMEPRFRGVRKRPWGRYAA 206
           G  E  +RGVRKRPWGRYAA
Sbjct: 21  GVKEVHYRGVRKRPWGRYAA 40



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>ERF11_ARATH (Q9C5I3) Ethylene-responsive transcription factor 11|
           (Ethylene-responsive element-binding factor 11)
           (EREBP-11) (AtERF11)
          Length = 166

 Score = 36.2 bits (82), Expect = 0.024
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = +3

Query: 162 RFRGVRKRPWGRYAA 206
           R+RGVRKRPWGRYAA
Sbjct: 19  RYRGVRKRPWGRYAA 33



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>ERF4_TOBAC (Q40477) Ethylene-responsive transcription factor 4|
           (Ethylene-responsive element-binding factor 4 homolog)
           (EREBP-3) (NtERF3)
          Length = 225

 Score = 36.2 bits (82), Expect = 0.024
 Identities = 15/20 (75%), Positives = 16/20 (80%)
 Frame = +3

Query: 147 GGMEPRFRGVRKRPWGRYAA 206
           G  E  +RGVRKRPWGRYAA
Sbjct: 21  GVKEVHYRGVRKRPWGRYAA 40



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>ERF12_ARATH (Q94ID6) Ethylene-responsive transcription factor 12|
           (Ethylene-responsive element-binding factor 12)
           (EREBP-12) (AtERF12)
          Length = 189

 Score = 35.4 bits (80), Expect = 0.041
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +3

Query: 156 EPRFRGVRKRPWGRYAA 206
           E  +RGVRKRPWGRYAA
Sbjct: 9   EVHYRGVRKRPWGRYAA 25



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>PTI5_LYCES (O04681) Pathogenesis-related genes transcriptional activator PTI5|
           (PTO-interacting protein 5)
          Length = 161

 Score = 32.7 bits (73), Expect = 0.27
 Identities = 11/15 (73%), Positives = 15/15 (100%)
 Frame = +3

Query: 162 RFRGVRKRPWGRYAA 206
           ++RGVR+RPWG+YAA
Sbjct: 58  KYRGVRRRPWGKYAA 72



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>PTI6_LYCES (O04682) Pathogenesis-related genes transcriptional activator PTI6|
           (PTO-interacting protein 6)
          Length = 248

 Score = 32.7 bits (73), Expect = 0.27
 Identities = 12/15 (80%), Positives = 15/15 (100%)
 Frame = +3

Query: 162 RFRGVRKRPWGRYAA 206
           +FRGVR+RPWGR+AA
Sbjct: 97  KFRGVRQRPWGRWAA 111



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>ERF15_ARATH (Q8VYM0) Ethylene-responsive transcription factor 15|
           (Ethylene-responsive element-binding factor 15)
           (EREBP-15) (AtERF15)
          Length = 243

 Score = 32.3 bits (72), Expect = 0.35
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = +3

Query: 156 EPRFRGVRKRPWGRYAA 206
           E  +RGVRKRPWG++AA
Sbjct: 83  ERSYRGVRKRPWGKFAA 99



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>ERF1B_ARATH (Q8LDC8) Ethylene-responsive transcription factor 1B|
           (Ethylene-responsive element-binding factor 1B)
           (EREBP-1B) (AtERF1)
          Length = 218

 Score = 31.6 bits (70), Expect = 0.59
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +3

Query: 156 EPRFRGVRKRPWGRYAA 206
           E  +RGVR+RPWG++AA
Sbjct: 79  EKSYRGVRRRPWGKFAA 95



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>ERF13_ARATH (Q8L9K1) Ethylene-responsive transcription factor 13|
           (Ethylene-responsive element-binding factor 13)
           (EREBP-13) (AtERF13)
          Length = 226

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 10/15 (66%), Positives = 15/15 (100%)
 Frame = +3

Query: 162 RFRGVRKRPWGRYAA 206
           ++RGVR+RPWG++AA
Sbjct: 91  QYRGVRRRPWGKFAA 105



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>AP23_ARATH (P42736) AP2 domain transcription factor RAP2.3 (Related to AP2|
           protein 3) (Cadmium-induced protein AS30)
          Length = 248

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 10/14 (71%), Positives = 14/14 (100%)
 Frame = +3

Query: 165 FRGVRKRPWGRYAA 206
           +RG+RKRPWG++AA
Sbjct: 79  YRGIRKRPWGKWAA 92



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>ERF1_TOBAC (Q40476) Ethylene-responsive transcription factor 1|
           (Ethylene-responsive element-binding factor 1) (EREBP-1)
           (NtERF1)
          Length = 236

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 10/14 (71%), Positives = 14/14 (100%)
 Frame = +3

Query: 165 FRGVRKRPWGRYAA 206
           +RGVR+RPWG++AA
Sbjct: 105 YRGVRRRPWGKFAA 118



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>ERF5_NICSY (Q9LW48) Ethylene-responsive transcription factor 5|
           (Ethylene-responsive element-binding factor 5 homolog)
           (EREBP-4) (NsERF4)
          Length = 282

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 10/14 (71%), Positives = 14/14 (100%)
 Frame = +3

Query: 165 FRGVRKRPWGRYAA 206
           +RGVR+RPWG++AA
Sbjct: 138 YRGVRQRPWGKFAA 151



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>ERF2_ARATH (O80338) Ethylene-responsive transcription factor 2|
           (Ethylene-responsive element-binding factor 2) (EREBP-2)
           (AtERF2)
          Length = 243

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 10/14 (71%), Positives = 14/14 (100%)
 Frame = +3

Query: 165 FRGVRKRPWGRYAA 206
           +RGVR+RPWG++AA
Sbjct: 117 YRGVRQRPWGKFAA 130



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>ERF2_TOBAC (Q40479) Ethylene-responsive transcription factor 2|
           (Ethylene-responsive element-binding factor 2) (EREBP-2)
           (NtERF2)
          Length = 233

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 10/14 (71%), Positives = 14/14 (100%)
 Frame = +3

Query: 165 FRGVRKRPWGRYAA 206
           +RGVR+RPWG++AA
Sbjct: 99  YRGVRQRPWGKFAA 112



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>ERF2_NICSY (Q9LW50) Ethylene-responsive transcription factor 2|
           (Ethylene-responsive element-binding factor 2) (EREBP-2)
           (NsERF2)
          Length = 237

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 10/14 (71%), Positives = 14/14 (100%)
 Frame = +3

Query: 165 FRGVRKRPWGRYAA 206
           +RGVR+RPWG++AA
Sbjct: 103 YRGVRQRPWGKFAA 116



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>ERF1_LYCES (Q84XB3) Ethylene-responsive transcription factor 1|
           (Ethylene-responsive element-binding factor 1) (EREBP-1)
           (ERF1-like protein) (LeERF1)
          Length = 244

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 10/14 (71%), Positives = 14/14 (100%)
 Frame = +3

Query: 165 FRGVRKRPWGRYAA 206
           +RGVR+RPWG++AA
Sbjct: 107 YRGVRQRPWGKFAA 120



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>ERF1A_ARATH (O80337) Ethylene-responsive transcription factor 1A|
           (Ethylene-responsive element-binding factor 1A)
           (EREBP-1A) (AtERF1)
          Length = 268

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 10/14 (71%), Positives = 14/14 (100%)
 Frame = +3

Query: 165 FRGVRKRPWGRYAA 206
           +RGVR+RPWG++AA
Sbjct: 148 YRGVRQRPWGKFAA 161



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>ERF5_ARATH (O80341) Ethylene-responsive transcription factor 5|
           (Ethylene-responsive element-binding factor 5) (EREBP-5)
           (AtERF5)
          Length = 300

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 10/14 (71%), Positives = 14/14 (100%)
 Frame = +3

Query: 165 FRGVRKRPWGRYAA 206
           +RGVR+RPWG++AA
Sbjct: 156 YRGVRQRPWGKFAA 169



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>ERF5_TOBAC (Q40478) Ethylene-responsive transcription factor 5|
           (Ethylene-responsive element-binding factor 5 homolog)
           (EREBP-4) (NtERF4)
          Length = 291

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 10/14 (71%), Positives = 14/14 (100%)
 Frame = +3

Query: 165 FRGVRKRPWGRYAA 206
           +RGVR+RPWG++AA
Sbjct: 145 YRGVRQRPWGKFAA 158



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>ERF6_ARATH (Q8VZ91) Ethylene-responsive transcription factor 6|
           (Ethylene-responsive element-binding factor 6) (EREBP-6)
           (AtERF6)
          Length = 282

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 10/14 (71%), Positives = 13/14 (92%)
 Frame = +3

Query: 165 FRGVRKRPWGRYAA 206
           +RGVR RPWG++AA
Sbjct: 137 YRGVRMRPWGKFAA 150



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>TINY_ARATH (Q39127) Transcriptional factor TINY|
          Length = 218

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = +3

Query: 150 GMEPRFRGVRKRPWGRYAA 206
           G  P +RGVRKR WG++ +
Sbjct: 31  GKHPVYRGVRKRNWGKWVS 49



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>DRE2E_ARATH (O80917) Dehydration-responsive element-binding protein 2E (DREB2E|
           protein)
          Length = 244

 Score = 28.5 bits (62), Expect = 5.0
 Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
 Frame = +3

Query: 144 GGGMEP--RFRGVRKRPWGRYAA 206
           GG   P  RFRGVR+R WG++ A
Sbjct: 61  GGPENPVCRFRGVRQRVWGKWVA 83


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.312    0.118    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,891,975
Number of Sequences: 219361
Number of extensions: 142177
Number of successful extensions: 257
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 257
length of database: 80,573,946
effective HSP length: 44
effective length of database: 70,922,062
effective search space used: 1702129488
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
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