ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast76a03 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473848.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 669 Score = 103 bits (52), Expect = 2e-19 Identities = 58/60 (96%) Strand = Plus / Plus Query: 149 cggcatggagcccaggttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 60 cggcatggagcccaggttccgcggcgtgaggaagcgcccgtggggcaggtacgcggcgga 119
>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10, complete sequence Length = 150551 Score = 103 bits (52), Expect = 2e-19 Identities = 58/60 (96%) Strand = Plus / Plus Query: 149 cggcatggagcccaggttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 70634 cggcatggagcccaggttccgcggcgtgaggaagcgcccgtggggcaggtacgcggcgga 70693
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 103 bits (52), Expect = 2e-19 Identities = 58/60 (96%) Strand = Plus / Plus Query: 149 cggcatggagcccaggttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| Sbjct: 30973261 cggcatggagcccaggttccgcggcgtgaggaagcgcccgtggggcaggtacgcggcgga 30973320 Score = 46.1 bits (23), Expect = 0.043 Identities = 29/31 (93%) Strand = Plus / Minus Query: 178 ggaagcggccgtggggcaggtacgcggcgga 208 |||||||||||||||| |||| ||||||||| Sbjct: 34168190 ggaagcggccgtgggggaggttcgcggcgga 34168160 Score = 44.1 bits (22), Expect = 0.17 Identities = 37/42 (88%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||||||||| ||||||||||||| | || ||||||||| Sbjct: 27384292 ccgcggcgtgcgacagcggccgtgggggaagttcgcggcgga 27384333 Score = 44.1 bits (22), Expect = 0.17 Identities = 34/38 (89%) Strand = Plus / Plus Query: 171 ggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||| ||||||||||||| | || ||||||||| Sbjct: 27373480 ggcgtgcggcagcggccgtgggggaagttcgcggcgga 27373517 Score = 44.1 bits (22), Expect = 0.17 Identities = 37/42 (88%) Strand = Plus / Minus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||| |||| |||||||||||||| | ||||||||| Sbjct: 10369837 ccgcggcgtacggaggcggccgtggggcaaattcgcggcgga 10369796 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Plus Query: 184 ggccgtggggcaggtacgcggcgga 208 |||||||||| |||||||||||||| Sbjct: 19799154 ggccgtgggggaggtacgcggcgga 19799178 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 181 agcggccgtggggcaggtacgcggcgga 208 ||||||||||||||| || ||||||||| Sbjct: 27345727 agcggccgtggggcaagttcgcggcgga 27345700
>gb|BT018001.1| Zea mays clone EL01N0526G07.c mRNA sequence Length = 1002 Score = 79.8 bits (40), Expect = 3e-12 Identities = 52/56 (92%) Strand = Plus / Plus Query: 153 atggagcccaggttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||||| |||||||||||||| |||||||| ||||||||||||| ||||||||| Sbjct: 122 atggagccgaggttccgcggcgtccggaagcgcccgtggggcaggttcgcggcgga 177
>ref|XM_464403.1| Oryza sativa (japonica cultivar-group), mRNA Length = 600 Score = 77.8 bits (39), Expect = 1e-11 Identities = 45/47 (95%) Strand = Plus / Plus Query: 162 aggttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 43 aggttccgcggggtgcggaagcggccgtgggggaggtacgcggcgga 89
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 77.8 bits (39), Expect = 1e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 162 aggttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 4959481 aggttccgcggggtgcggaagcggccgtgggggaggtacgcggcgga 4959435 Score = 60.0 bits (30), Expect = 3e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||||||| ||||||||||||||| || ||||||||| Sbjct: 26475538 ccgcggcgtgcggcagcggccgtggggcaagttcgcggcgga 26475579 Score = 46.1 bits (23), Expect = 0.043 Identities = 26/27 (96%) Strand = Plus / Minus Query: 182 gcggccgtggggcaggtacgcggcgga 208 ||||||||||||| ||||||||||||| Sbjct: 18943600 gcggccgtggggccggtacgcggcgga 18943574 Score = 44.1 bits (22), Expect = 0.17 Identities = 37/42 (88%) Strand = Plus / Minus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||| ||| || ||||||||||||||| || ||||||||| Sbjct: 26441472 ccgcggggtgaggcagcggccgtggggcaagttcgcggcgga 26441431 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 1883107 cgccgccgcagccgcagccgcagc 1883084
>dbj|AP005849.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0031B09 Length = 132729 Score = 77.8 bits (39), Expect = 1e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 162 aggttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 30607 aggttccgcggggtgcggaagcggccgtgggggaggtacgcggcgga 30561
>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1145_F01 Length = 113755 Score = 77.8 bits (39), Expect = 1e-11 Identities = 45/47 (95%) Strand = Plus / Minus Query: 162 aggttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct: 104220 aggttccgcggggtgcggaagcggccgtgggggaggtacgcggcgga 104174
>ref|NM_188531.1| Oryza sativa (japonica cultivar-group), Ozsa8200 predicted mRNA Length = 1122 Score = 67.9 bits (34), Expect = 1e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 163 ggttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||||||||||||||| |||||||||||| | |||||||||||| Sbjct: 425 ggttccgcggcgtgcggaggcggccgtgggggaagtacgcggcgga 470
>ref|XM_470092.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1194 Score = 67.9 bits (34), Expect = 1e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 163 ggttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||||||||||| ||||||||||||| |||| ||||||||| Sbjct: 405 ggttccgcggcgtgcggcagcggccgtgggggaggttcgcggcgga 450
>ref|XM_470241.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 426 Score = 67.9 bits (34), Expect = 1e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||||||||||||||||||||||| || ||||||||| Sbjct: 45 ccgcggcgtgcggaagcggccgtggggcaagttcgcggcgga 86
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 67.9 bits (34), Expect = 1e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 163 ggttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||||||||||| ||||||||||||| |||| ||||||||| Sbjct: 33889331 ggttccgcggcgtgcggcagcggccgtgggggaggttcgcggcgga 33889286 Score = 67.9 bits (34), Expect = 1e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||||||||||||||||||||||| || ||||||||| Sbjct: 2782058 ccgcggcgtgcggaagcggccgtggggcaagttcgcggcgga 2782099 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Plus Query: 121 ccgtcgcagccgcagccgcagc 142 |||||||||||||||||||||| Sbjct: 29092855 ccgtcgcagccgcagccgcagc 29092876 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 122 cgtcgcagccgcagccgcagc 142 ||||||||||||||||||||| Sbjct: 34133770 cgtcgcagccgcagccgcagc 34133750 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 cgcagccgcagccgcagcggg 145 ||||||||||||||||||||| Sbjct: 2682065 cgcagccgcagccgcagcggg 2682045 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 gtcgccgtcgcagccgcagccgcagcgg 144 ||||| |||||||||||||| ||||||| Sbjct: 35685015 gtcgcagtcgcagccgcagcggcagcgg 35685042 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 129 gccgcagccgcagcgggcggcggc 152 |||||||||||||| ||||||||| Sbjct: 27428775 gccgcagccgcagccggcggcggc 27428798
>gb|AC139172.2| Oryza sativa chromosome 3 BAC OSJNBb0042K11 genomic sequence, complete sequence Length = 27024 Score = 67.9 bits (34), Expect = 1e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 163 ggttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||||||||||| ||||||||||||| |||| ||||||||| Sbjct: 23533 ggttccgcggcgtgcggcagcggccgtgggggaggttcgcggcgga 23488
>gb|AY339376.1| Oryza sativa (japonica cultivar-group) Ap23 mRNA, complete cds Length = 660 Score = 67.9 bits (34), Expect = 1e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||||||||||||||||||||||| || ||||||||| Sbjct: 93 ccgcggcgtgcggaagcggccgtggggcaagttcgcggcgga 134
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 67.9 bits (34), Expect = 1e-08 Identities = 43/46 (93%) Strand = Plus / Minus Query: 163 ggttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||||||||||| ||||||||||||| |||| ||||||||| Sbjct: 33979803 ggttccgcggcgtgcggcagcggccgtgggggaggttcgcggcgga 33979758 Score = 67.9 bits (34), Expect = 1e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||||||||||||||||||||||| || ||||||||| Sbjct: 2782169 ccgcggcgtgcggaagcggccgtggggcaagttcgcggcgga 2782210 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Plus Query: 121 ccgtcgcagccgcagccgcagc 142 |||||||||||||||||||||| Sbjct: 29184277 ccgtcgcagccgcagccgcagc 29184298 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 122 cgtcgcagccgcagccgcagc 142 ||||||||||||||||||||| Sbjct: 34224242 cgtcgcagccgcagccgcagc 34224222 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 cgcagccgcagccgcagcggg 145 ||||||||||||||||||||| Sbjct: 2682175 cgcagccgcagccgcagcggg 2682155 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 gtcgccgtcgcagccgcagccgcagcgg 144 ||||| |||||||||||||| ||||||| Sbjct: 35775088 gtcgcagtcgcagccgcagcggcagcgg 35775115 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 129 gccgcagccgcagcgggcggcggc 152 |||||||||||||| ||||||||| Sbjct: 27520098 gccgcagccgcagccggcggcggc 27520121
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 67.9 bits (34), Expect = 1e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 163 ggttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||||||||||||||| |||||||||||| | |||||||||||| Sbjct: 6813515 ggttccgcggcgtgcggaggcggccgtgggggaagtacgcggcgga 6813560 Score = 42.1 bits (21), Expect = 0.67 Identities = 27/29 (93%) Strand = Plus / Minus Query: 119 cgccgtcgcagccgcagccgcagcgggcg 147 ||||| |||||||||||||||||| |||| Sbjct: 12245794 cgccgccgcagccgcagccgcagccggcg 12245766 Score = 42.1 bits (21), Expect = 0.67 Identities = 30/33 (90%) Strand = Plus / Plus Query: 112 cccccgtcgccgtcgcagccgcagccgcagcgg 144 |||||| ||||| ||||||||||||||| |||| Sbjct: 9180664 cccccgccgccgccgcagccgcagccgcggcgg 9180696 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 40279484 cgccgccgcagccgcagccgcagc 40279461 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 30724527 cgccgccgcagccgcagccgcagc 30724504 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 ggcggcggcatggagcccaggttc 167 |||||||||||||||||| ||||| Sbjct: 5352422 ggcggcggcatggagcccgggttc 5352399
>gb|AC133007.4| Oryza sativa chromosome 3 BAC OSJNBa0094J08 genomic sequence, complete sequence Length = 172337 Score = 67.9 bits (34), Expect = 1e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 163 ggttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||||||||||| ||||||||||||| |||| ||||||||| Sbjct: 168360 ggttccgcggcgtgcggcagcggccgtgggggaggttcgcggcgga 168405
>gb|AC137635.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0038D20, from chromosome 3, complete sequence Length = 165395 Score = 67.9 bits (34), Expect = 1e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||||||||||||||||||||||| || ||||||||| Sbjct: 54014 ccgcggcgtgcggaagcggccgtggggcaagttcgcggcgga 54055
>gb|AC105734.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050N02, complete sequence Length = 133373 Score = 67.9 bits (34), Expect = 1e-08 Identities = 40/42 (95%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||||||||||||||||||||||| || ||||||||| Sbjct: 126978 ccgcggcgtgcggaagcggccgtggggcaagttcgcggcgga 127019 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 cgcagccgcagccgcagcggg 145 ||||||||||||||||||||| Sbjct: 26984 cgcagccgcagccgcagcggg 26964
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 67.9 bits (34), Expect = 1e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 163 ggttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||||||||||||||| |||||||||||| | |||||||||||| Sbjct: 165667 ggttccgcggcgtgcggaggcggccgtgggggaagtacgcggcgga 165712
>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0417G05 Length = 147803 Score = 67.9 bits (34), Expect = 1e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 163 ggttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||||||||||||||| |||||||||||| | |||||||||||| Sbjct: 95576 ggttccgcggcgtgcggaggcggccgtgggggaagtacgcggcgga 95621
>dbj|AK106517.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-B02, full insert sequence Length = 1817 Score = 67.9 bits (34), Expect = 1e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 163 ggttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||||||||||||||| |||||||||||| | |||||||||||| Sbjct: 797 ggttccgcggcgtgcggaggcggccgtgggggaagtacgcggcgga 842
>dbj|AK101054.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033015K21, full insert sequence Length = 1560 Score = 67.9 bits (34), Expect = 1e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 163 ggttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||||||||||||||| |||||||||||| | |||||||||||| Sbjct: 563 ggttccgcggcgtgcggaggcggccgtgggggaagtacgcggcgga 608
>dbj|AK068252.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013145D23, full insert sequence Length = 1071 Score = 67.9 bits (34), Expect = 1e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 163 ggttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||||||||||| ||||||||||||| |||| ||||||||| Sbjct: 435 ggttccgcggcgtgcggcagcggccgtgggggaggttcgcggcgga 480
>dbj|AK066670.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074E02, full insert sequence Length = 1218 Score = 67.9 bits (34), Expect = 1e-08 Identities = 43/46 (93%) Strand = Plus / Plus Query: 163 ggttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||||||||||| ||||||||||||| |||| ||||||||| Sbjct: 432 ggttccgcggcgtgcggcagcggccgtgggggaggttcgcggcgga 477
>ref|XM_477669.1| Oryza sativa (japonica cultivar-group), mRNA Length = 899 Score = 61.9 bits (31), Expect = 7e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 170 cggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||||||||||||||||||||| |||| ||||||||| Sbjct: 276 cggcgtgcggaagcggccgtgggggaggttcgcggcgga 314
>gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1122D01, complete sequence Length = 126532 Score = 61.9 bits (31), Expect = 7e-07 Identities = 34/35 (97%) Strand = Plus / Plus Query: 174 gtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||||||||||||||||||| |||||||||||| Sbjct: 3781 gtgcggaagcggccgtggggcaagtacgcggcgga 3815
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 61.9 bits (31), Expect = 7e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 170 cggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||||||||||||||||||||| |||| ||||||||| Sbjct: 12773404 cggcgtgcggaagcggccgtgggggaggttcgcggcgga 12773366 Score = 54.0 bits (27), Expect = 2e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 174 gtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||| ||||||||||||||||| ||||||||| Sbjct: 12794537 gtgcggaggcggccgtggggcaggttcgcggcgga 12794503 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Minus Query: 162 aggttccgcggcgtgcggaagcggccgtggggcaggtacgc 202 ||||||| |||||||||| |||||||||||| |||||||| Sbjct: 28247228 aggttcctcggcgtgcggcggcggccgtgggggaggtacgc 28247188 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 cgtcgcagccgcagccgcag 141 |||||||||||||||||||| Sbjct: 18049951 cgtcgcagccgcagccgcag 18049932
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 61.9 bits (31), Expect = 7e-07 Identities = 34/35 (97%) Strand = Plus / Plus Query: 174 gtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||||||||||||||||||| |||||||||||| Sbjct: 21884567 gtgcggaagcggccgtggggcaagtacgcggcgga 21884601 Score = 60.0 bits (30), Expect = 3e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||| ||| ||||||||||||||||| ||||||||||||| Sbjct: 24283425 ccgcggggtgaggaagcggccgtggggccggtacgcggcgga 24283384 Score = 60.0 bits (30), Expect = 3e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 163 ggttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||||||||||| ||||||||||||||||| | ||||||| Sbjct: 14530057 ggttccgcggcgtgcggcggcggccgtggggcaggttctcggcgga 14530102 Score = 56.0 bits (28), Expect = 4e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 165 ttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||| |||||| ||||||||||||||||| | ||||||||||| Sbjct: 24299779 ttccgtggcgtgaggaagcggccgtggggccgttacgcggcgga 24299736 Score = 46.1 bits (23), Expect = 0.043 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtgggg 193 ||||||||||||| ||||||||||||| Sbjct: 21264183 ccgcggcgtgcggcagcggccgtgggg 21264209 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 115 ccgtcgccgtcgcagccgcagccgcagc 142 ||||||||||||| ||||| |||||||| Sbjct: 6689213 ccgtcgccgtcgccgccgccgccgcagc 6689186
>dbj|AP005325.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0710F09 Length = 198867 Score = 61.9 bits (31), Expect = 7e-07 Identities = 37/39 (94%) Strand = Plus / Minus Query: 170 cggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||||||||||||||||||||| |||| ||||||||| Sbjct: 31528 cggcgtgcggaagcggccgtgggggaggttcgcggcgga 31490 Score = 54.0 bits (27), Expect = 2e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 174 gtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||| ||||||||||||||||| ||||||||| Sbjct: 52661 gtgcggaggcggccgtggggcaggttcgcggcgga 52627
>dbj|AK108503.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-143-H07, full insert sequence Length = 899 Score = 61.9 bits (31), Expect = 7e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 170 cggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||||||||||||||||||||| |||| ||||||||| Sbjct: 276 cggcgtgcggaagcggccgtgggggaggttcgcggcgga 314
>ref|XM_475482.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 570 Score = 60.0 bits (30), Expect = 3e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||| ||| ||||||||||||||||| ||||||||||||| Sbjct: 69 ccgcggggtgaggaagcggccgtggggccggtacgcggcgga 110
>ref|XM_467109.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1035 Score = 60.0 bits (30), Expect = 3e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||||||| ||||||||||||||| || ||||||||| Sbjct: 465 ccgcggcgtgcggcagcggccgtggggcaagttcgcggcgga 506
>ref|NM_197761.1| Oryza sativa (japonica cultivar-group) putative ethylene-responsive element binding protein (OSJNBb0089A17.16), mRNA Length = 822 Score = 60.0 bits (30), Expect = 3e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||| |||||| ||||||||||||||| |||||||||||| Sbjct: 270 ccgcggggtgcggcagcggccgtggggcaagtacgcggcgga 311
>gb|AC124141.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0065C11, complete sequence Length = 141578 Score = 60.0 bits (30), Expect = 3e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 163 ggttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||||||||||| ||||||||||||||||| | ||||||| Sbjct: 68062 ggttccgcggcgtgcggcggcggccgtggggcaggttctcggcgga 68107
>gb|BT017785.1| Zea mays clone EL01N0503H11.c mRNA sequence Length = 1086 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 171 ggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||| ||||||||||||||||| ||||||||||||| Sbjct: 209 ggcgtgaggaagcggccgtggggccggtacgcggcgga 246
>gb|AC108523.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_C04, complete sequence Length = 96328 Score = 60.0 bits (30), Expect = 3e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||| ||| ||||||||||||||||| ||||||||||||| Sbjct: 49161 ccgcggggtgaggaagcggccgtggggccggtacgcggcgga 49120 Score = 56.0 bits (28), Expect = 4e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 165 ttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||| |||||| ||||||||||||||||| | ||||||||||| Sbjct: 65515 ttccgtggcgtgaggaagcggccgtggggccgttacgcggcgga 65472
>gb|AY341826.1| Oryza sativa (japonica cultivar-group) AP2 domain-containing protein AP28 mRNA, complete cds Length = 1145 Score = 60.0 bits (30), Expect = 3e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||| |||||| ||||||||||||||| |||||||||||| Sbjct: 363 ccgcggggtgcggcagcggccgtggggcaagtacgcggcgga 404
>gb|AY339378.1| Oryza sativa (japonica cultivar-group) Ap25 mRNA, complete cds Length = 1312 Score = 60.0 bits (30), Expect = 3e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||||||| ||||||||||||||| || ||||||||| Sbjct: 596 ccgcggcgtgcggcagcggccgtggggcaagttcgcggcgga 637
>gb|AC079890.13| Oryza sativa chromosome 10 BAC OSJNBb0089A17 genomic sequence, complete sequence Length = 132927 Score = 60.0 bits (30), Expect = 3e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||| |||||| ||||||||||||||| |||||||||||| Sbjct: 125802 ccgcggggtgcggcagcggccgtggggcaagtacgcggcgga 125843
>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete sequence Length = 141307 Score = 60.0 bits (30), Expect = 3e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||| |||||| ||||||||||||||| |||||||||||| Sbjct: 8581 ccgcggggtgcggcagcggccgtggggcaagtacgcggcgga 8622
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 60.0 bits (30), Expect = 3e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||| |||||| ||||||||||||||| |||||||||||| Sbjct: 21693898 ccgcggggtgcggcagcggccgtggggcaagtacgcggcgga 21693939 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 163 ggttccgcggcgtgcggaagcggccgtgggg 193 |||||||||||||| |||||||||||||||| Sbjct: 12475907 ggttccgcggcgtgaggaagcggccgtgggg 12475937 Score = 52.0 bits (26), Expect = 7e-04 Identities = 38/42 (90%) Strand = Plus / Minus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||||||| ||| |||||||||||||| || ||||||||| Sbjct: 15550020 ccgcggcgtgaggaggcggccgtggggcaagttcgcggcgga 15549979 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 107 cgcggcccccgtcgccgtcgcagccgcagccgcagc 142 ||||||||||| | ||| ||| |||||||||||||| Sbjct: 20655155 cgcggcccccgccaccgccgccgccgcagccgcagc 20655190 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 19866368 cgccgccgcagccgcagccgcagc 19866345 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 13091223 cgccgccgcagccgcagccgcagc 13091200 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 1068421 cgccgccgcagccgcagccgcagc 1068398
>dbj|AP004676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_B06 Length = 131956 Score = 60.0 bits (30), Expect = 3e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||||||| ||||||||||||||| || ||||||||| Sbjct: 75454 ccgcggcgtgcggcagcggccgtggggcaagttcgcggcgga 75495 Score = 44.1 bits (22), Expect = 0.17 Identities = 37/42 (88%) Strand = Plus / Minus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||| ||| || ||||||||||||||| || ||||||||| Sbjct: 41388 ccgcggggtgaggcagcggccgtggggcaagttcgcggcgga 41347
>dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519E06 Length = 170634 Score = 60.0 bits (30), Expect = 3e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||||||| ||||||||||||||| || ||||||||| Sbjct: 17919 ccgcggcgtgcggcagcggccgtggggcaagttcgcggcgga 17960
>dbj|AK111513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001P16, full insert sequence Length = 2682 Score = 60.0 bits (30), Expect = 3e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||| ||| ||||||||||||||||| ||||||||||||| Sbjct: 255 ccgcggggtgaggaagcggccgtggggccggtacgcggcgga 296
>dbj|AK110613.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-168-H06, full insert sequence Length = 1206 Score = 60.0 bits (30), Expect = 3e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 163 ggttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||||||||||| ||||||||||||||||| | ||||||| Sbjct: 334 ggttccgcggcgtgcggcggcggccgtggggcaggttctcggcgga 379
>gb|AY106969.1| Zea mays PCO114516 mRNA sequence Length = 950 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 171 ggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||| ||||||||||||||||| ||||||||||||| Sbjct: 60 ggcgtgaggaagcggccgtggggccggtacgcggcgga 97
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 60.0 bits (30), Expect = 3e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||| |||||| ||||||||||||||| |||||||||||| Sbjct: 21705561 ccgcggggtgcggcagcggccgtggggcaagtacgcggcgga 21705602 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 163 ggttccgcggcgtgcggaagcggccgtgggg 193 |||||||||||||| |||||||||||||||| Sbjct: 12483247 ggttccgcggcgtgaggaagcggccgtgggg 12483277 Score = 52.0 bits (26), Expect = 7e-04 Identities = 38/42 (90%) Strand = Plus / Minus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||||||| ||| |||||||||||||| || ||||||||| Sbjct: 15558261 ccgcggcgtgaggaggcggccgtggggcaagttcgcggcgga 15558220 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 107 cgcggcccccgtcgccgtcgcagccgcagccgcagc 142 ||||||||||| | ||| ||| |||||||||||||| Sbjct: 20666427 cgcggcccccgccaccgccgccgccgcagccgcagc 20666462 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 19877644 cgccgccgcagccgcagccgcagc 19877621 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 13098563 cgccgccgcagccgcagccgcagc 13098540 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 1068418 cgccgccgcagccgcagccgcagc 1068395
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 60.0 bits (30), Expect = 3e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||||||| ||||||||||||||| || ||||||||| Sbjct: 181232 ccgcggcgtgcggcagcggccgtggggcaagttcgcggcgga 181273 Score = 44.1 bits (22), Expect = 0.17 Identities = 37/42 (88%) Strand = Plus / Minus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||| ||| || ||||||||||||||| || ||||||||| Sbjct: 160219 ccgcggggtgaggcagcggccgtggggcaagttcgcggcgga 160178
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 58.0 bits (29), Expect = 1e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 115 ccgtcgccgtcgcagccgcagccgcagcgggcggcgg 151 ||||||||| |||||||||||||||||| |||||||| Sbjct: 78884 ccgtcgccgccgcagccgcagccgcagccggcggcgg 78848 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Minus Query: 117 gtcgccgtcgcagccgcagccgcagc 142 ||||||||||| |||||||||||||| Sbjct: 78888 gtcgccgtcgccgccgcagccgcagc 78863
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 58.0 bits (29), Expect = 1e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 115 ccgtcgccgtcgcagccgcagccgcagcgggcggcgg 151 ||||||||| |||||||||||||||||| |||||||| Sbjct: 18975686 ccgtcgccgccgcagccgcagccgcagccggcggcgg 18975650 Score = 46.1 bits (23), Expect = 0.043 Identities = 26/27 (96%) Strand = Plus / Minus Query: 167 ccgcggcgtgcggaagcggccgtgggg 193 ||||||||||||| ||||||||||||| Sbjct: 3288645 ccgcggcgtgcggcagcggccgtgggg 3288619 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Minus Query: 117 gtcgccgtcgcagccgcagccgcagc 142 ||||||||||| |||||||||||||| Sbjct: 18975690 gtcgccgtcgccgccgcagccgcagc 18975665 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 22046430 cgccgccgcagccgcagccgcagc 22046453 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 cgcagccgcagccgcagcgg 144 |||||||||||||||||||| Sbjct: 1437163 cgcagccgcagccgcagcgg 1437182
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 58.0 bits (29), Expect = 1e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 115 ccgtcgccgtcgcagccgcagccgcagcgggcggcgg 151 ||||||||| |||||||||||||||||| |||||||| Sbjct: 19134335 ccgtcgccgccgcagccgcagccgcagccggcggcgg 19134299 Score = 46.1 bits (23), Expect = 0.043 Identities = 26/27 (96%) Strand = Plus / Minus Query: 167 ccgcggcgtgcggaagcggccgtgggg 193 ||||||||||||| ||||||||||||| Sbjct: 3297358 ccgcggcgtgcggcagcggccgtgggg 3297332 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Minus Query: 117 gtcgccgtcgcagccgcagccgcagc 142 ||||||||||| |||||||||||||| Sbjct: 19134339 gtcgccgtcgccgccgcagccgcagc 19134314 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 22356341 cgccgccgcagccgcagccgcagc 22356364 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 cgcagccgcagccgcagcgg 144 |||||||||||||||||||| Sbjct: 1434884 cgcagccgcagccgcagcgg 1434903
>ref|XM_475484.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 711 Score = 56.0 bits (28), Expect = 4e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 165 ttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||| |||||| ||||||||||||||||| | ||||||||||| Sbjct: 112 ttccgtggcgtgaggaagcggccgtggggccgttacgcggcgga 155
>gb|AY576527.1| Oryza sativa ethylene-responsive element binding factor (EREBP) mRNA, complete cds Length = 1046 Score = 56.0 bits (28), Expect = 4e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 165 ttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||| |||||| ||||||||||||||||| | ||||||||||| Sbjct: 176 ttccgtggcgtgaggaagcggccgtggggccgttacgcggcgga 219
>dbj|AK111755.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023061G02, full insert sequence Length = 1094 Score = 56.0 bits (28), Expect = 4e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 165 ttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||| |||||| ||||||||||||||||| | ||||||||||| Sbjct: 220 ttccgtggcgtgaggaagcggccgtggggccgttacgcggcgga 263
>ref|NM_196288.1| Oryza sativa (japonica cultivar-group) putative protein containing AP2 DNA binding domain (OSJNBb0061I18.6), mRNA Length = 927 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 163 ggttccgcggcgtgcggaagcggccgtgggg 193 |||||||||||||| |||||||||||||||| Sbjct: 311 ggttccgcggcgtgaggaagcggccgtgggg 341
>ref|NM_187806.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1492 Score = 54.0 bits (27), Expect = 2e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 174 gtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||| ||||||||||||||||| ||||||||| Sbjct: 309 gtgcggaggcggccgtggggcaggttcgcggcgga 343
>gb|AC079936.7| Oryza sativa (japonica cultivar-group) chromosome X clone OSJNBb0061I18, complete sequence Length = 143163 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 163 ggttccgcggcgtgcggaagcggccgtgggg 193 |||||||||||||| |||||||||||||||| Sbjct: 28268 ggttccgcggcgtgaggaagcggccgtgggg 28238
>dbj|AK110269.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-163-C07, full insert sequence Length = 1260 Score = 54.0 bits (27), Expect = 2e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 163 ggttccgcggcgtgcggaagcggccgtgggg 193 |||||||||||||| |||||||||||||||| Sbjct: 351 ggttccgcggcgtgaggaagcggccgtgggg 381
>dbj|AK062612.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-A10, full insert sequence Length = 1492 Score = 54.0 bits (27), Expect = 2e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 174 gtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||| ||||||||||||||||| ||||||||| Sbjct: 309 gtgcggaggcggccgtggggcaggttcgcggcgga 343
>ref|NM_196730.1| Oryza sativa (japonica cultivar-group) putative retrovirus-related pol polyprotein from transposon TNT (OSJNBa0094K20.5), mRNA Length = 375 Score = 52.0 bits (26), Expect = 7e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||||||| ||| |||||||||||||| || ||||||||| Sbjct: 39 ccgcggcgtgaggaggcggccgtggggcaagttcgcggcgga 80
>ref|XM_778030.1| PREDICTED: Strongylocentrotus purpuratus similar to Homeobox protein Nkx-2.5 (Homeobox protein NK-2 homolog E) (Cardiac-specific homeobox) (Homeobox protein CSX) (LOC577823), mRNA Length = 1035 Score = 52.0 bits (26), Expect = 7e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagcgg 144 |||||||||||||||||||||||||| Sbjct: 759 cgccgtcgcagccgcagccgcagcgg 784
>gb|AC025907.2|AC025907 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0094K20, complete sequence Length = 193119 Score = 52.0 bits (26), Expect = 7e-04 Identities = 38/42 (90%) Strand = Plus / Minus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||||||| ||| |||||||||||||| || ||||||||| Sbjct: 37386 ccgcggcgtgaggaggcggccgtggggcaagttcgcggcgga 37345
>ref|XM_482301.1| Oryza sativa (japonica cultivar-group), mRNA Length = 495 Score = 50.1 bits (25), Expect = 0.003 Identities = 40/45 (88%) Strand = Plus / Plus Query: 164 gttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||| ||| |||||||||||||||| | ||||| |||||| Sbjct: 327 gttccgcggggtgaggaagcggccgtggggaaagtacggggcgga 371
>ref|XM_550327.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1029 Score = 50.1 bits (25), Expect = 0.003 Identities = 40/45 (88%) Strand = Plus / Plus Query: 164 gttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||| ||| |||||||||||||||| | ||||| |||||| Sbjct: 360 gttccgcggggtgaggaagcggccgtgggggaagtacggggcgga 404
>ref|NM_186117.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1525 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Plus Query: 162 aggttccgcggcgtgcggaagcggccgtggggcaggtacgc 202 ||||||| |||||||||| |||||||||||| |||||||| Sbjct: 284 aggttcctcggcgtgcggcggcggccgtgggggaggtacgc 324
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 50.1 bits (25), Expect = 0.003 Identities = 40/45 (88%) Strand = Plus / Minus Query: 164 gttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||| ||| |||||||||||||||| | ||||| |||||| Sbjct: 19340828 gttccgcggggtgaggaagcggccgtggggaaagtacggggcgga 19340784 Score = 46.1 bits (23), Expect = 0.043 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtgggg 193 ||||||||||||| ||||||||||||| Sbjct: 26887384 ccgcggcgtgcggcagcggccgtgggg 26887410 Score = 44.1 bits (22), Expect = 0.17 Identities = 34/38 (89%) Strand = Plus / Minus Query: 171 ggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||| |||||||||||| ||||||||||||| Sbjct: 4298174 ggcgtgcggcggcggccgtgggggcggtacgcggcgga 4298137 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cgcagccgcagccgcagcgg 144 |||||||||||||||||||| Sbjct: 24847838 cgcagccgcagccgcagcgg 24847819 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 3735959 cgccgccgcagccgcagccgcagc 3735936
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 50.1 bits (25), Expect = 0.003 Identities = 40/45 (88%) Strand = Plus / Plus Query: 164 gttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||| ||| |||||||||||||||| | ||||| |||||| Sbjct: 3067060 gttccgcggggtgaggaagcggccgtgggggaagtacggggcgga 3067104 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Plus Query: 171 ggcgtgcggaagcggccgtggggcaggtacgc 202 ||||||||||||||||||| ||| |||||||| Sbjct: 28434730 ggcgtgcggaagcggccgtcggggaggtacgc 28434761 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Minus Query: 120 gccgtcgcagccgcagccgcag 141 |||||||||||||||||||||| Sbjct: 28464263 gccgtcgcagccgcagccgcag 28464242 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Plus Query: 125 cgcagccgcagccgcagcgggcggc 149 |||||||||||||||||| |||||| Sbjct: 20521639 cgcagccgcagccgcagccggcggc 20521663 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Plus Query: 122 cgtcgcagccgcagccgcagc 142 ||||||||||||||||||||| Sbjct: 19746898 cgtcgcagccgcagccgcagc 19746918 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 129 gccgcagccgcagcgggcggcggc 152 |||||||||||||| ||||||||| Sbjct: 10131867 gccgcagccgcagcaggcggcggc 10131890
>dbj|AB026295.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0681F10 Length = 170371 Score = 50.1 bits (25), Expect = 0.003 Identities = 40/45 (88%) Strand = Plus / Plus Query: 164 gttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||| ||| |||||||||||||||| | ||||| |||||| Sbjct: 21245 gttccgcggggtgaggaagcggccgtgggggaagtacggggcgga 21289
>dbj|AP004570.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0625E02 Length = 153921 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Minus Query: 162 aggttccgcggcgtgcggaagcggccgtggggcaggtacgc 202 ||||||| |||||||||| |||||||||||| |||||||| Sbjct: 102773 aggttcctcggcgtgcggcggcggccgtgggggaggtacgc 102733
>dbj|AP004636.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0685B10 Length = 148544 Score = 50.1 bits (25), Expect = 0.003 Identities = 40/45 (88%) Strand = Plus / Minus Query: 164 gttccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||| ||| |||||||||||||||| | ||||| |||||| Sbjct: 70271 gttccgcggggtgaggaagcggccgtggggaaagtacggggcgga 70227
>dbj|AK105365.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-F02, full insert sequence Length = 1519 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Plus Query: 162 aggttccgcggcgtgcggaagcggccgtggggcaggtacgc 202 ||||||| |||||||||| |||||||||||| |||||||| Sbjct: 284 aggttcctcggcgtgcggcggcggccgtgggggaggtacgc 324
>dbj|AB103120.1| Oryza sativa (japonica cultivar-group) fzp gene for frizzy panicle, complete cds Length = 1020 Score = 50.1 bits (25), Expect = 0.003 Identities = 37/41 (90%) Strand = Plus / Plus Query: 162 aggttccgcggcgtgcggaagcggccgtggggcaggtacgc 202 ||||||| |||||||||| |||||||||||| |||||||| Sbjct: 232 aggttcctcggcgtgcggcggcggccgtgggggaggtacgc 272
>gb|AF493799.1| Zea mays DRE binding factor 2 (dbf2) mRNA, complete cds Length = 1026 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Plus Query: 164 gttccgcggcgtgcggaagcggccgtggggca 195 ||||||||||||||||| |||| ||||||||| Sbjct: 342 gttccgcggcgtgcggatgcgggcgtggggca 373
>gb|AY395745.1| Vitis aestivalis putative ethylene response factor ERF3b mRNA, complete cds Length = 663 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Plus Query: 171 ggcgtgcggaagcggccgtggggcaggtacgc 202 |||||||| ||| ||||||||||||||||||| Sbjct: 70 ggcgtgcgcaagaggccgtggggcaggtacgc 101
>emb|AL133375.25| Human DNA sequence from clone RP3-330M21 on chromosome 6 Contains the 3' end of the SRF gene for serum response factor (c-fos serum response element-binding transcription factor), a gene for a novel protein (KIAA0076 KIAA0708), the gene for a putative c-Myc-responsive protein (RCL), the gene for KIAA1855 protein and CpG islands, complete sequence Length = 117071 Score = 48.1 bits (24), Expect = 0.011 Identities = 27/28 (96%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagcgggc 146 ||||| |||||||||||||||||||||| Sbjct: 65959 cgccgccgcagccgcagccgcagcgggc 65986
>ref|NM_032538.1| Homo sapiens tau tubulin kinase 1 (TTBK1), mRNA Length = 7128 Score = 48.1 bits (24), Expect = 0.011 Identities = 27/28 (96%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagcgggc 146 ||||| |||||||||||||||||||||| Sbjct: 189 cgccgccgcagccgcagccgcagcgggc 216
>gb|AF448789.1| Zea mays DREB-like protein (dreb1) mRNA, complete cds Length = 1388 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Plus Query: 164 gttccgcggcgtgcggaagcggccgtggggca 195 ||||||||||||||||| |||| ||||||||| Sbjct: 338 gttccgcggcgtgcggatgcgggcgtggggca 369
>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0661G04 Length = 157292 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Plus Query: 171 ggcgtgcggaagcggccgtggggcaggtacgc 202 ||||||||||||||||||| ||| |||||||| Sbjct: 147308 ggcgtgcggaagcggccgtcggggaggtacgc 147339
>dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0532H03 Length = 166128 Score = 48.1 bits (24), Expect = 0.011 Identities = 30/32 (93%) Strand = Plus / Plus Query: 171 ggcgtgcggaagcggccgtggggcaggtacgc 202 ||||||||||||||||||| ||| |||||||| Sbjct: 41763 ggcgtgcggaagcggccgtcggggaggtacgc 41794 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Minus Query: 120 gccgtcgcagccgcagccgcag 141 |||||||||||||||||||||| Sbjct: 71296 gccgtcgcagccgcagccgcag 71275
>emb|CR974479.17| Pig DNA sequence from clone PigE-150P18 on chromosome 7, complete sequence Length = 152730 Score = 48.1 bits (24), Expect = 0.011 Identities = 27/28 (96%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagcgggc 146 ||||| |||||||||||||||||||||| Sbjct: 87333 cgccgccgcagccgcagccgcagcgggc 87360
>gb|AC105318.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1058_F05, complete sequence Length = 109126 Score = 46.1 bits (23), Expect = 0.043 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtgggg 193 ||||||||||||| ||||||||||||| Sbjct: 50789 ccgcggcgtgcggcagcggccgtgggg 50815
>ref|XM_483546.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1323 Score = 46.1 bits (23), Expect = 0.043 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtgggg 193 ||||||||||||| ||||||||||||| Sbjct: 453 ccgcggcgtgcggcagcggccgtgggg 479
>ref|XM_474281.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 573 Score = 46.1 bits (23), Expect = 0.043 Identities = 29/31 (93%) Strand = Plus / Plus Query: 178 ggaagcggccgtggggcaggtacgcggcgga 208 |||||||||||||||| |||| ||||||||| Sbjct: 56 ggaagcggccgtgggggaggttcgcggcgga 86
>ref|XM_465993.1| Oryza sativa (japonica cultivar-group), mRNA Length = 720 Score = 46.1 bits (23), Expect = 0.043 Identities = 26/27 (96%) Strand = Plus / Plus Query: 182 gcggccgtggggcaggtacgcggcgga 208 ||||||||||||| ||||||||||||| Sbjct: 135 gcggccgtggggccggtacgcggcgga 161
>gb|AY023187.1| Oryza sativa microsatellite MRG5512 containing (GCG)X8, closest to marker S10074, genomic sequence Length = 224 Score = 46.1 bits (23), Expect = 0.043 Identities = 35/39 (89%) Strand = Plus / Minus Query: 112 cccccgtcgccgtcgcagccgcagccgcagcgggcggcg 150 |||||||||||| ||| ||||| ||||| |||||||||| Sbjct: 131 cccccgtcgccgccgccgccgccgccgccgcgggcggcg 93
>gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0011J22 map R10571S, complete sequence Length = 154441 Score = 46.1 bits (23), Expect = 0.043 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtgggg 193 ||||||||||||| ||||||||||||| Sbjct: 26340 ccgcggcgtgcggcagcggccgtgggg 26366
>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0073K23 map near R10571S, complete sequence Length = 161073 Score = 46.1 bits (23), Expect = 0.043 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtgggg 193 ||||||||||||| ||||||||||||| Sbjct: 125641 ccgcggcgtgcggcagcggccgtgggg 125667
>ref|XM_818274.1| Trypanosoma brucei TREU927 hypothetical protein (Tb10.26.0310) partial mRNA Length = 1800 Score = 46.1 bits (23), Expect = 0.043 Identities = 23/23 (100%) Strand = Plus / Plus Query: 125 cgcagccgcagccgcagcgggcg 147 ||||||||||||||||||||||| Sbjct: 1501 cgcagccgcagccgcagcgggcg 1523
>gb|AY341827.1| Oryza sativa (japonica cultivar-group) AP2 domain-containing protein AP29 mRNA, complete cds Length = 1853 Score = 46.1 bits (23), Expect = 0.043 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtgggg 193 ||||||||||||| ||||||||||||| Sbjct: 1153 ccgcggcgtgcggcagcggccgtgggg 1179
>emb|AL606619.3|OSJN00032 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043A12, complete sequence Length = 190432 Score = 46.1 bits (23), Expect = 0.043 Identities = 29/31 (93%) Strand = Plus / Minus Query: 178 ggaagcggccgtggggcaggtacgcggcgga 208 |||||||||||||||| |||| ||||||||| Sbjct: 79572 ggaagcggccgtgggggaggttcgcggcgga 79542
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.043 Identities = 35/39 (89%) Strand = Plus / Plus Query: 112 cccccgtcgccgtcgcagccgcagccgcagcgggcggcg 150 |||||||||||| ||| ||||| ||||| |||||||||| Sbjct: 26172021 cccccgtcgccgccgccgccgccgccgccgcgggcggcg 26172059 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 cgcagccgcagcgggcggcg 150 |||||||||||||||||||| Sbjct: 5688774 cgcagccgcagcgggcggcg 5688793 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 3301746 cgccgccgcagccgcagccgcagc 3301723
>dbj|AP005845.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0461D06 Length = 112895 Score = 46.1 bits (23), Expect = 0.043 Identities = 26/27 (96%) Strand = Plus / Minus Query: 182 gcggccgtggggcaggtacgcggcgga 208 ||||||||||||| ||||||||||||| Sbjct: 107133 gcggccgtggggccggtacgcggcgga 107107
>dbj|AP004464.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0665C04 Length = 177054 Score = 46.1 bits (23), Expect = 0.043 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtgggg 193 ||||||||||||| ||||||||||||| Sbjct: 150174 ccgcggcgtgcggcagcggccgtgggg 150200
>dbj|AK067373.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106K03, full insert sequence Length = 833 Score = 46.1 bits (23), Expect = 0.043 Identities = 29/31 (93%) Strand = Plus / Plus Query: 178 ggaagcggccgtggggcaggtacgcggcgga 208 |||||||||||||||| |||| ||||||||| Sbjct: 157 ggaagcggccgtgggggaggttcgcggcgga 187
>dbj|AK064252.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-C06, full insert sequence Length = 1323 Score = 46.1 bits (23), Expect = 0.043 Identities = 26/27 (96%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtgggg 193 ||||||||||||| ||||||||||||| Sbjct: 453 ccgcggcgtgcggcagcggccgtgggg 479
>emb|AL732340.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0811B10, complete sequence Length = 99356 Score = 46.1 bits (23), Expect = 0.043 Identities = 29/31 (93%) Strand = Plus / Minus Query: 178 ggaagcggccgtggggcaggtacgcggcgga 208 |||||||||||||||| |||| ||||||||| Sbjct: 84498 ggaagcggccgtgggggaggttcgcggcgga 84468
>emb|AL732346.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0818H01, complete sequence Length = 101125 Score = 46.1 bits (23), Expect = 0.043 Identities = 29/31 (93%) Strand = Plus / Minus Query: 178 ggaagcggccgtggggcaggtacgcggcgga 208 |||||||||||||||| |||| ||||||||| Sbjct: 18868 ggaagcggccgtgggggaggttcgcggcgga 18838
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 46.1 bits (23), Expect = 0.043 Identities = 26/27 (96%) Strand = Plus / Minus Query: 116 cgtcgccgtcgcagccgcagccgcagc 142 ||||||| ||||||||||||||||||| Sbjct: 530009 cgtcgccttcgcagccgcagccgcagc 529983
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.043 Identities = 35/39 (89%) Strand = Plus / Plus Query: 112 cccccgtcgccgtcgcagccgcagccgcagcgggcggcg 150 |||||||||||| ||| ||||| ||||| |||||||||| Sbjct: 26100197 cccccgtcgccgccgccgccgccgccgccgcgggcggcg 26100235 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 cgcagccgcagcgggcggcg 150 |||||||||||||||||||| Sbjct: 5688767 cgcagccgcagcgggcggcg 5688786 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 3301691 cgccgccgcagccgcagccgcagc 3301668
>emb|BX000457.2|CNS08CDE Oryza sativa chromosome 12, . BAC OJ1388_B05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144241 Score = 46.1 bits (23), Expect = 0.043 Identities = 35/39 (89%) Strand = Plus / Plus Query: 112 cccccgtcgccgtcgcagccgcagccgcagcgggcggcg 150 |||||||||||| ||| ||||| ||||| |||||||||| Sbjct: 62259 cccccgtcgccgccgccgccgccgccgccgcgggcggcg 62297
>gb|AY831394.1| Oryza sativa (indica cultivar-group) BTH-induced ERF transcriptional factor 3 (BIERF3) mRNA, complete cds Length = 1199 Score = 44.1 bits (22), Expect = 0.17 Identities = 37/42 (88%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||| ||| || ||||||||||||||| || ||||||||| Sbjct: 508 ccgcggggtgaggcagcggccgtggggcaagttcgcggcgga 549
>ref|XM_480319.1| Oryza sativa (japonica cultivar-group), mRNA Length = 528 Score = 44.1 bits (22), Expect = 0.17 Identities = 34/38 (89%) Strand = Plus / Plus Query: 171 ggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||| |||||||||||| ||||||||||||| Sbjct: 115 ggcgtgcggcggcggccgtgggggcggtacgcggcgga 152
>ref|XM_467107.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1209 Score = 44.1 bits (22), Expect = 0.17 Identities = 37/42 (88%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||| ||| || ||||||||||||||| || ||||||||| Sbjct: 507 ccgcggggtgaggcagcggccgtggggcaagttcgcggcgga 548
>ref|XM_506890.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1003_B06.13 mRNA Length = 1302 Score = 44.1 bits (22), Expect = 0.17 Identities = 37/42 (88%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||| ||| || ||||||||||||||| || ||||||||| Sbjct: 508 ccgcggggtgaggcagcggccgtggggcaagttcgcggcgga 549
>ref|XM_469580.1| Oryza sativa (japonica cultivar-group), mRNA Length = 522 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Plus Query: 121 ccgtcgcagccgcagccgcagc 142 |||||||||||||||||||||| Sbjct: 247 ccgtcgcagccgcagccgcagc 268
>ref|XM_473405.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 987 Score = 44.1 bits (22), Expect = 0.17 Identities = 37/42 (88%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||||||||| ||||||||||||| | || ||||||||| Sbjct: 417 ccgcggcgtgcgacagcggccgtgggggaagttcgcggcgga 458
>ref|XM_473404.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 957 Score = 44.1 bits (22), Expect = 0.17 Identities = 34/38 (89%) Strand = Plus / Plus Query: 171 ggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||| ||||||||||||| | || ||||||||| Sbjct: 424 ggcgtgcggcagcggccgtgggggaagttcgcggcgga 461
>ref|XM_471354.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 387 Score = 44.1 bits (22), Expect = 0.17 Identities = 37/42 (88%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||| |||| |||||||||||||| | ||||||||| Sbjct: 36 ccgcggcgtacggaggcggccgtggggcaaattcgcggcgga 77
>gb|AC146936.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1154F06 map near C10769, complete sequence Length = 194856 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Minus Query: 121 ccgtcgcagccgcagccgcagc 142 |||||||||||||||||||||| Sbjct: 46436 ccgtcgcagccgcagccgcagc 46415
>ref|XM_960254.1| Neurospora crassa OR74A hypothetical protein (NCU02960.1) partial mRNA Length = 1914 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Minus Query: 70 ccgtcgaacactcggcgccacccatg 95 |||||||||||||||| ||||||||| Sbjct: 34 ccgtcgaacactcggctccacccatg 9
>ref|XM_330147.1| Neurospora crassa OR74A hypothetical protein (NCU02960.1) partial mRNA Length = 1914 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Minus Query: 70 ccgtcgaacactcggcgccacccatg 95 |||||||||||||||| ||||||||| Sbjct: 34 ccgtcgaacactcggctccacccatg 9
>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21, complete sequence Length = 141787 Score = 44.1 bits (22), Expect = 0.17 Identities = 37/42 (88%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||||||||| ||||||||||||| | || ||||||||| Sbjct: 118888 ccgcggcgtgcgacagcggccgtgggggaagttcgcggcgga 118929 Score = 44.1 bits (22), Expect = 0.17 Identities = 34/38 (89%) Strand = Plus / Plus Query: 171 ggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||| ||||||||||||| | || ||||||||| Sbjct: 108076 ggcgtgcggcagcggccgtgggggaagttcgcggcgga 108113 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 181 agcggccgtggggcaggtacgcggcgga 208 ||||||||||||||| || ||||||||| Sbjct: 81655 agcggccgtggggcaagttcgcggcgga 81628
>gb|AC137997.2| Oryza sativa chromosome 3 BAC OJ1499_D04 genomic sequence, complete sequence Length = 91084 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Minus Query: 121 ccgtcgcagccgcagccgcagc 142 |||||||||||||||||||||| Sbjct: 78521 ccgtcgcagccgcagccgcagc 78500
>gb|AY339379.1| Oryza sativa (japonica cultivar-group) Ap26 mRNA, complete cds Length = 1271 Score = 44.1 bits (22), Expect = 0.17 Identities = 37/42 (88%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||||||||| ||||||||||||| | || ||||||||| Sbjct: 524 ccgcggcgtgcgacagcggccgtgggggaagttcgcggcgga 565
>emb|BX842625.1| Neurospora crassa DNA linkage group I BAC clone B16D18 Length = 76004 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Minus Query: 70 ccgtcgaacactcggcgccacccatg 95 |||||||||||||||| ||||||||| Sbjct: 42565 ccgtcgaacactcggctccacccatg 42540
>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29 Length = 339650 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Minus Query: 116 cgtcgccgtcgcagccgcagcc 137 |||||||||||||||||||||| Sbjct: 314870 cgtcgccgtcgcagccgcagcc 314849
>emb|AL731613.5|OSJN00257 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065H10, complete sequence Length = 133967 Score = 44.1 bits (22), Expect = 0.17 Identities = 37/42 (88%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||||||||| ||||||||||||| | || ||||||||| Sbjct: 35446 ccgcggcgtgcgacagcggccgtgggggaagttcgcggcgga 35487 Score = 44.1 bits (22), Expect = 0.17 Identities = 34/38 (89%) Strand = Plus / Plus Query: 171 ggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||| ||||||||||||| | || ||||||||| Sbjct: 24634 ggcgtgcggcagcggccgtgggggaagttcgcggcgga 24671
>ref|NM_009453.1| Mus musculus U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1, related sequence 2 (U2af1-rs2), transcript variant 1, mRNA Length = 2735 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Plus Query: 117 gtcgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||||| Sbjct: 1610 gtcgcagtcgcagccgcagccgcagc 1635
>emb|BX842602.1|OSJN00295 Oryza sativa genomic DNA, chromosome 4, BAC clone: B1234D02, complete sequence Length = 134041 Score = 44.1 bits (22), Expect = 0.17 Identities = 37/42 (88%) Strand = Plus / Minus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||| |||| |||||||||||||| | ||||||||| Sbjct: 49101 ccgcggcgtacggaggcggccgtggggcaaattcgcggcgga 49060
>gb|AY196003.1| Zea mays branched silkless1 mRNA, complete cds Length = 1518 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Plus Query: 183 cggccgtggggcaggtacgcggcgga 208 |||||||||||| ||||||||||||| Sbjct: 328 cggccgtggggccggtacgcggcgga 353
>gb|AY178191.1| Zea mays branched silkless1 (bd1) mRNA, complete cds Length = 1523 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Plus Query: 183 cggccgtggggcaggtacgcggcgga 208 |||||||||||| ||||||||||||| Sbjct: 333 cggccgtggggccggtacgcggcgga 358
>dbj|AP005164.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0054L03 Length = 183623 Score = 44.1 bits (22), Expect = 0.17 Identities = 34/38 (89%) Strand = Plus / Minus Query: 171 ggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||| |||||||||||| ||||||||||||| Sbjct: 60968 ggcgtgcggcggcggccgtgggggcggtacgcggcgga 60931
>dbj|AK109141.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-E09, full insert sequence Length = 1399 Score = 44.1 bits (22), Expect = 0.17 Identities = 37/42 (88%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||||||||| ||||||||||||| | || ||||||||| Sbjct: 553 ccgcggcgtgcgacagcggccgtgggggaagttcgcggcgga 594
>dbj|AK107745.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-132-H03, full insert sequence Length = 882 Score = 44.1 bits (22), Expect = 0.17 Identities = 37/42 (88%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 ||||||||| |||| |||||||||||||| | ||||||||| Sbjct: 247 ccgcggcgtacggaggcggccgtggggcaaattcgcggcgga 288
>dbj|AK107276.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-A05, full insert sequence Length = 947 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Plus Query: 121 ccgtcgcagccgcagccgcagc 142 |||||||||||||||||||||| Sbjct: 292 ccgtcgcagccgcagccgcagc 313
>dbj|AK105940.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B11, full insert sequence Length = 1209 Score = 44.1 bits (22), Expect = 0.17 Identities = 37/42 (88%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||| ||| || ||||||||||||||| || ||||||||| Sbjct: 507 ccgcggggtgaggcagcggccgtggggcaagttcgcggcgga 548
>dbj|AK073812.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033068P11, full insert sequence Length = 1302 Score = 44.1 bits (22), Expect = 0.17 Identities = 37/42 (88%) Strand = Plus / Plus Query: 167 ccgcggcgtgcggaagcggccgtggggcaggtacgcggcgga 208 |||||| ||| || ||||||||||||||| || ||||||||| Sbjct: 508 ccgcggggtgaggcagcggccgtggggcaagttcgcggcgga 549
>dbj|AK070430.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048H06, full insert sequence Length = 711 Score = 44.1 bits (22), Expect = 0.17 Identities = 22/22 (100%) Strand = Plus / Plus Query: 120 gccgtcgcagccgcagccgcag 141 |||||||||||||||||||||| Sbjct: 108 gccgtcgcagccgcagccgcag 129
>gb|BT023986.1| Zea mays clone EL01N0413D04 mRNA sequence Length = 1441 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Plus Query: 127 cagccgcagccgcagcgggcggcggc 152 |||||||||||||||| ||||||||| Sbjct: 305 cagccgcagccgcagccggcggcggc 330
>gb|AY108951.1| Zea mays PCO116810 mRNA sequence Length = 468 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Plus Query: 127 cagccgcagccgcagcgggcggcggc 152 |||||||||||||||| ||||||||| Sbjct: 302 cagccgcagccgcagccggcggcggc 327
>gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence Length = 323584 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Minus Query: 183 cggccgtggggcaggtacgcggcgga 208 |||||||||||| ||||||||||||| Sbjct: 122756 cggccgtggggccggtacgcggcgga 122731 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Minus Query: 184 ggccgtggggcaggtacgcggcgga 208 ||||||||||| ||||||||||||| Sbjct: 151360 ggccgtggggccggtacgcggcgga 151336
>emb|BX469932.7| Mouse DNA sequence from clone RP23-391L6 on chromosome X, complete sequence Length = 116319 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Minus Query: 117 gtcgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||||| Sbjct: 42731 gtcgcagtcgcagccgcagccgcagc 42706
>emb|X66931.1|DHTRA D.hydei transformer (tra) gene Length = 1148 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Plus Query: 116 cgtcgccgtcgcagccgcagccgcag 141 ||||| |||||||||||||||||||| Sbjct: 640 cgtcgacgtcgcagccgcagccgcag 665
>dbj|D45205.1|MUSU2AF1R2 Mouse U2af1-rs2 mRNA, complete cds Length = 2735 Score = 44.1 bits (22), Expect = 0.17 Identities = 25/26 (96%) Strand = Plus / Plus Query: 117 gtcgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||||| Sbjct: 1610 gtcgcagtcgcagccgcagccgcagc 1635
>ref|NM_183780.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2598 Score = 42.1 bits (21), Expect = 0.67 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagcgggcg 147 ||||| |||||||||||||||||| |||| Sbjct: 17 cgccgccgcagccgcagccgcagccggcg 45
>ref|XM_470230.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1338 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 cgcagccgcagccgcagcggg 145 ||||||||||||||||||||| Sbjct: 23 cgcagccgcagccgcagcggg 43
>ref|XM_472355.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 879 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Plus Query: 184 ggccgtggggcaggtacgcggcgga 208 |||||||||| |||||||||||||| Sbjct: 173 ggccgtgggggaggtacgcggcgga 197
>gb|CP000078.1| Leishmania major strain Friedlin chromosome 2, complete sequence Length = 355714 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 116 cgtcgccgtcgcagccgcagc 136 ||||||||||||||||||||| Sbjct: 233440 cgtcgccgtcgcagccgcagc 233420
>gb|AC108755.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0028C22, complete sequence Length = 154228 Score = 42.1 bits (21), Expect = 0.67 Identities = 30/33 (90%) Strand = Plus / Minus Query: 119 cgccgtcgcagccgcagccgcagcgggcggcgg 151 ||||| ||||||||||||||||| |||||||| Sbjct: 146642 cgccgccgcagccgcagccgcaggaggcggcgg 146610
>ref|XM_817157.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0137) partial mRNA Length = 5970 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Plus Query: 116 cgtcgccgtcgcagccgcagc 136 ||||||||||||||||||||| Sbjct: 3616 cgtcgccgtcgcagccgcagc 3636
>ref|NM_022797.1| Rattus norvegicus glutamate receptor, ionotropic, N-methyl D-aspartate 2D (Grin2d), mRNA Length = 5246 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Minus Query: 126 gcagccgcagccgcagcgggcggcg 150 ||||| ||||||||||||||||||| Sbjct: 3843 gcagcggcagccgcagcgggcggcg 3819
>emb|AL939110.1|SCO939110 Streptomyces coelicolor A3(2) complete genome; segment 7/29 Length = 283100 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Plus Query: 120 gccgtcgcagccgcagccgca 140 ||||||||||||||||||||| Sbjct: 48867 gccgtcgcagccgcagccgca 48887
>emb|AL731642.3|OSJN00289 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0014D23, complete sequence Length = 133759 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Plus Query: 184 ggccgtggggcaggtacgcggcgga 208 |||||||||| |||||||||||||| Sbjct: 87616 ggccgtgggggaggtacgcggcgga 87640
>dbj|D13213.1|RATNMDARD1 Rattus norvegicus mRNA for N-methyl-D-aspartate receptor subunit (NMDAR2D-1) Length = 4104 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Minus Query: 126 gcagccgcagccgcagcgggcggcg 150 ||||| ||||||||||||||||||| Sbjct: 3137 gcagcggcagccgcagcgggcggcg 3113
>gb|DP000057.1| Dasypus novemcinctus target 117 genomic scaffold Length = 444202 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 tcgcagccgcagccgcagcgggcgg 148 ||||||||||||||||||| ||||| Sbjct: 345145 tcgcagccgcagccgcagccggcgg 345121
>gb|AE016819.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VI, complete sequence Length = 1813164 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Minus Query: 117 gtcgccgtcgcagccgcagccgcag 141 ||||| ||||||||||||||||||| Sbjct: 1720590 gtcgcagtcgcagccgcagccgcag 1720566 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gtcgcagccgcagccgcagc 142 |||||||||||||||||||| Sbjct: 72444 gtcgcagccgcagccgcagc 72463
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 0.67 Identities = 30/33 (90%) Strand = Plus / Minus Query: 119 cgccgtcgcagccgcagccgcagcgggcggcgg 151 ||||| ||||||||||||||||| |||||||| Sbjct: 19819375 cgccgccgcagccgcagccgcaggaggcggcgg 19819343 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 18475097 cgccgccgcagccgcagccgcagc 18475074 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 18463638 cgccgccgcagccgcagccgcagc 18463615 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 gcagccgcagccgcagcggg 145 |||||||||||||||||||| Sbjct: 1298067 gcagccgcagccgcagcggg 1298086
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 122 cgtcgcagccgcagccgcagc 142 ||||||||||||||||||||| Sbjct: 97582 cgtcgcagccgcagccgcagc 97562
>dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0011D01 Length = 168655 Score = 42.1 bits (21), Expect = 0.67 Identities = 30/33 (90%) Strand = Plus / Plus Query: 112 cccccgtcgccgtcgcagccgcagccgcagcgg 144 |||||| ||||| ||||||||||||||| |||| Sbjct: 81046 cccccgccgccgccgcagccgcagccgcggcgg 81078
>dbj|AP004818.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0551A03 Length = 173027 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Plus Query: 122 cgtcgcagccgcagccgcagc 142 ||||||||||||||||||||| Sbjct: 13943 cgtcgcagccgcagccgcagc 13963
>dbj|AP005723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0001B21 Length = 143722 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Plus Query: 122 cgtcgcagccgcagccgcagc 142 ||||||||||||||||||||| Sbjct: 131354 cgtcgcagccgcagccgcagc 131374
>dbj|AP003686.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0659D09 Length = 168253 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Plus Query: 125 cgcagccgcagccgcagcgggcggc 149 |||||||||||||||||| |||||| Sbjct: 93934 cgcagccgcagccgcagccggcggc 93958
>dbj|AP002953.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0426D06 Length = 162173 Score = 42.1 bits (21), Expect = 0.67 Identities = 27/29 (93%) Strand = Plus / Minus Query: 119 cgccgtcgcagccgcagccgcagcgggcg 147 ||||| |||||||||||||||||| |||| Sbjct: 70420 cgccgccgcagccgcagccgcagccggcg 70392
>dbj|AP005735.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0034B12 Length = 124083 Score = 42.1 bits (21), Expect = 0.67 Identities = 30/33 (90%) Strand = Plus / Minus Query: 119 cgccgtcgcagccgcagccgcagcgggcggcgg 151 ||||| ||||||||||||||||| |||||||| Sbjct: 43815 cgccgccgcagccgcagccgcaggaggcggcgg 43783
>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0450E05 Length = 176553 Score = 42.1 bits (21), Expect = 0.67 Identities = 30/33 (90%) Strand = Plus / Minus Query: 119 cgccgtcgcagccgcagccgcagcgggcggcgg 151 ||||| ||||||||||||||||| |||||||| Sbjct: 165061 cgccgccgcagccgcagccgcaggaggcggcgg 165029
>dbj|AK100155.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023019E12, full insert sequence Length = 1603 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Plus Query: 122 cgtcgcagccgcagccgcagc 142 ||||||||||||||||||||| Sbjct: 618 cgtcgcagccgcagccgcagc 638
>dbj|AK072852.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138H13, full insert sequence Length = 1630 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Plus Query: 125 cgcagccgcagccgcagcggg 145 ||||||||||||||||||||| Sbjct: 16 cgcagccgcagccgcagcggg 36
>ref|NM_212379.1| Eremothecium gossypii AFR695Cp (AFR695C), mRNA Length = 2271 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Plus Query: 117 gtcgccgtcgcagccgcagccgcag 141 ||||| ||||||||||||||||||| Sbjct: 816 gtcgcagtcgcagccgcagccgcag 840
>dbj|AK070488.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049C21, full insert sequence Length = 3487 Score = 42.1 bits (21), Expect = 0.67 Identities = 27/29 (93%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagcgggcg 147 ||||| |||||||||||||||||| |||| Sbjct: 134 cgccgccgcagccgcagccgcagccggcg 162
>dbj|AK065222.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002G20, full insert sequence Length = 3543 Score = 42.1 bits (21), Expect = 0.67 Identities = 30/33 (90%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagcgggcggcgg 151 ||||| ||||||||||||||||| |||||||| Sbjct: 132 cgccgccgcagccgcagccgcaggaggcggcgg 164
>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence Length = 405672 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Minus Query: 184 ggccgtggggcaggtacgcggcgga 208 ||||||||||| ||||||||||||| Sbjct: 163267 ggccgtggggccggtacgcggcgga 163243
>gb|L31612.1|RATNR2DB Rattus norvegicus NMDA receptor subunit NR2D mRNA, complete cds Length = 5246 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Minus Query: 126 gcagccgcagccgcagcgggcggcg 150 ||||| ||||||||||||||||||| Sbjct: 3843 gcagcggcagccgcagcgggcggcg 3819
>gb|L31611.1|RATNR2DA Rattus norvegicus NMDA receptor subunit NR2D mRNA, complete cds Length = 4670 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Minus Query: 126 gcagccgcagccgcagcgggcggcg 150 ||||| ||||||||||||||||||| Sbjct: 3118 gcagcggcagccgcagcgggcggcg 3094
>gb|U08260.1|RNU08260 Rattus norvegicus Sprague-Dawley N-methyl-D-aspartate receptor NMDAR2D subunit mRNA, complete cds Length = 4957 Score = 42.1 bits (21), Expect = 0.67 Identities = 24/25 (96%) Strand = Plus / Minus Query: 126 gcagccgcagccgcagcgggcggcg 150 ||||| ||||||||||||||||||| Sbjct: 3189 gcagcggcagccgcagcgggcggcg 3165
>dbj|AB012145.1| Streptomyces lividans mRNA encoding metallothionein-like domain, complete cds Length = 1109 Score = 42.1 bits (21), Expect = 0.67 Identities = 21/21 (100%) Strand = Plus / Minus Query: 120 gccgtcgcagccgcagccgca 140 ||||||||||||||||||||| Sbjct: 972 gccgtcgcagccgcagccgca 952
>gb|AC165229.7| Mus musculus chromosome 1, clone RP23-47K10, complete sequence Length = 218929 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cgccgtcgcagccgcagccgcagc 142 |||||| ||||||||||||||||| Sbjct: 110866 cgccgtggcagccgcagccgcagc 110843
>ref|XM_483215.1| Oryza sativa (japonica cultivar-group), mRNA Length = 832 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cgcagccgcagccgcagcgg 144 |||||||||||||||||||| Sbjct: 253 cgcagccgcagccgcagcgg 234
>ref|XM_480222.1| Oryza sativa (japonica cultivar-group), mRNA Length = 936 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 132 cgccgccgcagccgcagccgcagc 155
>ref|XM_476135.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 264 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 115 ccgtcgccgtcgcagccgcagccgcagc 142 ||||||||||||| ||||| |||||||| Sbjct: 38 ccgtcgccgtcgccgccgccgccgcagc 11
>ref|NM_194613.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0023I19.11), mRNA Length = 1788 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 35 cgccgccgcagccgcagccgcagc 58
>ref|XM_464046.1| Oryza sativa (japonica cultivar-group), mRNA Length = 4219 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 393 cgccgccgcagccgcagccgcagc 370
>ref|NM_197590.1| Oryza sativa (japonica cultivar-group) putative ubiquitin protein (OSJNBb0015I11.23), mRNA Length = 2359 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 107 cgcggcccccgtcgccgtcgcagccgcagccgcagc 142 ||||||||||| | ||| ||| |||||||||||||| Sbjct: 211 cgcggcccccgccaccgccgccgccgcagccgcagc 176
>ref|NM_197435.1| Oryza sativa (japonica cultivar-group) putative phospholipase (OSJNBa0096G08.23), mRNA Length = 3512 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 170 cgccgccgcagccgcagccgcagc 193
>ref|NM_021926.2| Homo sapiens aristaless-like homeobox 4 (ALX4), mRNA Length = 1586 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 406 cgccgccgcagccgcagccgcagc 429
>ref|XM_478150.1| Oryza sativa (japonica cultivar-group), mRNA Length = 513 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 cgtcgcagccgcagccgcag 141 |||||||||||||||||||| Sbjct: 83 cgtcgcagccgcagccgcag 102
>ref|XM_473403.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 957 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 181 agcggccgtggggcaggtacgcggcgga 208 ||||||||||||||| || ||||||||| Sbjct: 473 agcggccgtggggcaagttcgcggcgga 500
>gb|AC102611.10| Mus musculus chromosome 1, clone RP23-416O18, complete sequence Length = 210808 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gtcgcagccgcagccgcagc 142 |||||||||||||||||||| Sbjct: 114150 gtcgcagccgcagccgcagc 114169
>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0087J09, complete sequence Length = 153351 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 3103 cgccgccgcagccgcagccgcagc 3080
>gb|U92983.1|HSU92983 Homo sapiens clone Dt1P1b11 mRNA, CAG repeat region Length = 1049 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 111 gcccccgtcgccgtcgcagccgcagccgcagc 142 |||||| |||| | |||||||||||||||||| Sbjct: 757 gcccccctcgcagccgcagccgcagccgcagc 788
>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence Length = 2205233 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 acactcggcgccacccatgg 96 |||||||||||||||||||| Sbjct: 1525003 acactcggcgccacccatgg 1524984
>gb|AC078894.11| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0096G08 map E1363S, complete sequence Length = 140681 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 127406 cgccgccgcagccgcagccgcagc 127383
>gb|AC120506.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0006O08 map S15179S, complete sequence Length = 166005 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 gtcgccgtcgcagccgcagccgcagcgg 144 ||||| |||||||||||||| ||||||| Sbjct: 82793 gtcgcagtcgcagccgcagcggcagcgg 82820
>gb|AC091553.15| Trypanosoma brucei chromosome 7 clone RPCI93-10C21, complete sequence Length = 166619 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 acactcggcgccacccatgg 96 |||||||||||||||||||| Sbjct: 73012 acactcggcgccacccatgg 73031
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 129 gccgcagccgcagcgggcggcggc 152 |||||||||||||| ||||||||| Sbjct: 128982 gccgcagccgcagccggcggcggc 129005
>gb|BC035199.1| Mus musculus chromobox homolog 2 (Drosophila Pc class), mRNA (cDNA clone MGC:30255 IMAGE:5137505), complete cds Length = 3754 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 gccgcagcgggcggcggcatggag 158 ||||| |||||||||||||||||| Sbjct: 63 gccgcggcgggcggcggcatggag 86
>gb|BC021516.1| Mus musculus lamin B receptor, mRNA (cDNA clone MGC:38491 IMAGE:5352337), complete cds Length = 3494 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagc 142 |||||| ||||||||||||||||| Sbjct: 292 cgccgtggcagccgcagccgcagc 315
>gb|AF211527.1| Nicotiana tabacum Avr9/Cf-9 rapidly elicited protein 1 (ACRE1) mRNA, complete cds Length = 1167 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 181 agcggccgtggggcaggtacgcggcgga 208 ||||||||||||| | |||||||||||| Sbjct: 601 agcggccgtgggggaagtacgcggcgga 628
>ref|NM_012235.2| Homo sapiens SREBP cleavage-activating protein (SCAP), mRNA Length = 4255 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 111 gcccccgtcgccgtcgcagccgcagccgcagc 142 ||||||||||||| ||| ||||| |||||||| Sbjct: 104 gcccccgtcgccgccgccgccgccgccgcagc 135
>ref|NM_031922.2| Homo sapiens RALBP1 associated Eps domain containing 1 (REPS1), mRNA Length = 3565 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gtcgcagccgcagccgcagc 142 |||||||||||||||||||| Sbjct: 332 gtcgcagccgcagccgcagc 351
>ref|NM_021240.2| Homo sapiens doublesex and mab-3 related transcription factor 3 (DMRT3), mRNA Length = 2184 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gccgtcgcagccgcagccgc 139 |||||||||||||||||||| Sbjct: 380 gccgtcgcagccgcagccgc 399
>gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0016G07, complete sequence Length = 123167 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 115 ccgtcgccgtcgcagccgcagccgcagc 142 ||||||||||||| ||||| |||||||| Sbjct: 60375 ccgtcgccgtcgccgccgccgccgcagc 60348
>gb|AC118211.10| Mus musculus chromosome 8, clone RP24-223O5, complete sequence Length = 192713 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 128 agccgcagccgcagcgggcggcgg 151 |||||| ||||||||||||||||| Sbjct: 123512 agccgcggccgcagcgggcggcgg 123535
>ref|XM_751392.1| Ustilago maydis 521 hypothetical protein (UM00338.1) partial mRNA Length = 5742 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gtcgcagccgcagccgcagc 142 |||||||||||||||||||| Sbjct: 5656 gtcgcagccgcagccgcagc 5675
>ref|XM_753087.1| Ustilago maydis 521 hypothetical protein (UM02033.1) partial mRNA Length = 2661 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gtcgcagccgcagccgcagc 142 |||||||||||||||||||| Sbjct: 2221 gtcgcagccgcagccgcagc 2240
>ref|XM_757557.1| Ustilago maydis 521 hypothetical protein (UM06503.1) partial mRNA Length = 1155 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gtcgcagccgcagccgcagc 142 |||||||||||||||||||| Sbjct: 228 gtcgcagccgcagccgcagc 247
>ref|XM_540881.2| PREDICTED: Canis familiaris similar to neurexin 2 isoform alpha-2 precursor, transcript variant 1 (LOC483760), mRNA Length = 5094 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 108 gcggcccccgtcgccgtcgcagccgcagccgc 139 |||||| ||||||||||||| ||||| ||||| Sbjct: 21 gcggccgccgtcgccgtcgccgccgccgccgc 52
>ref|XM_848091.1| PREDICTED: Canis familiaris similar to neurexin 2 isoform alpha-2 precursor, transcript variant 2 (LOC483760), mRNA Length = 5301 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 108 gcggcccccgtcgccgtcgcagccgcagccgc 139 |||||| ||||||||||||| ||||| ||||| Sbjct: 21 gcggccgccgtcgccgtcgccgccgccgccgc 52
>ref|XM_820037.1| Trypanosoma brucei TREU927 clone RPCI93-10C21 hypothetical protein (Tb927.7.5630) partial mRNA Length = 2001 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 acactcggcgccacccatgg 96 |||||||||||||||||||| Sbjct: 1902 acactcggcgccacccatgg 1883
>ref|XM_850247.1| PREDICTED: Canis familiaris hypothetical LOC482662 (LOC482662), mRNA Length = 2286 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 gtcgcagccgcagccgcagc 142 |||||||||||||||||||| Sbjct: 461 gtcgcagccgcagccgcagc 442
>ref|XM_748781.1| Aspergillus fumigatus Af293 SH2-containing inositol 5-phosphatase 2 (Afu5g07600) partial mRNA Length = 1356 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 125 cgcagccgcagccgcagcgggcggcggc 152 |||||||||||||||||| |||| |||| Sbjct: 1142 cgcagccgcagccgcagccggcgccggc 1169
>ref|XM_749938.1| Aspergillus fumigatus Af293 anucleate primary sterigmata ApsB (Afu3g05720) partial mRNA Length = 4914 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 117 gtcgccgtcgcagccgcagccgca 140 ||||| |||||||||||||||||| Sbjct: 1398 gtcgcagtcgcagccgcagccgca 1421
>gb|BC025583.1| Mus musculus lamin B receptor, mRNA (cDNA clone IMAGE:5324962), containing frame-shift errors Length = 3340 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagc 142 |||||| ||||||||||||||||| Sbjct: 101 cgccgtggcagccgcagccgcagc 124
>gb|BC035286.1| Homo sapiens RALBP1 associated Eps domain containing 1, mRNA (cDNA clone IMAGE:5184565), with apparent retained intron Length = 2797 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gtcgcagccgcagccgcagc 142 |||||||||||||||||||| Sbjct: 282 gtcgcagccgcagccgcagc 301
>ref|XM_807545.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506649.90) partial mRNA Length = 7023 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 cgcagccgcagccgcagcgg 144 |||||||||||||||||||| Sbjct: 3882 cgcagccgcagccgcagcgg 3901
>gb|BC042522.1| Mus musculus lamin B receptor, mRNA (cDNA clone MGC:28596 IMAGE:4216442), complete cds Length = 2319 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagc 142 |||||| ||||||||||||||||| Sbjct: 311 cgccgtggcagccgcagccgcagc 334
>gb|AC136842.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0085C16, complete sequence Length = 156069 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 84426 cgccgccgcagccgcagccgcagc 84449
>gb|AC151275.3| Mus musculus BAC clone RP24-201F8 from chromosome 17, complete sequence Length = 190772 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 cgcagccgcagccgcagcgg 144 |||||||||||||||||||| Sbjct: 23450 cgcagccgcagccgcagcgg 23469 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 23438 cgccgccgcagccgcagccgcagc 23461
>emb|AL590308.8| Human DNA sequence from clone RP11-501K14 on chromosome 6 Contains the 5' end of the REPS1 gene for RALBP1 associated Eps domain containing 1, the gene for hypothetical protein PRO2013 and two CpG islands, complete sequence Length = 100296 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 gtcgcagccgcagccgcagc 142 |||||||||||||||||||| Sbjct: 20080 gtcgcagccgcagccgcagc 20061
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 cgcagccgcagccgcagcgg 144 |||||||||||||||||||| Sbjct: 1543361 cgcagccgcagccgcagcgg 1543380
>gb|AF308822.1|AF308822S1 Homo sapiens aristaless-like homeobox 4 (ALX4) gene, exon 1 Length = 596 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 379 cgccgccgcagccgcagccgcagc 402
>emb|AL136365.9| Human DNA sequence from clone RP11-143M15 on chromosome 9p23-24.3 Contains the DMRT1 gene for doublesex and mab-3 related transcription factor 1, the DMRT3 gene for doublesex and mab-3 related transcription factor 3 and four CpG islands, complete sequence Length = 179006 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gccgtcgcagccgcagccgc 139 |||||||||||||||||||| Sbjct: 155197 gccgtcgcagccgcagccgc 155216
>gb|AC123516.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0035B18, complete sequence Length = 123425 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 cgcagccgcagccgcagcgg 144 |||||||||||||||||||| Sbjct: 55958 cgcagccgcagccgcagcgg 55977
>gb|AC158961.3| Mus musculus chromosome 1, clone RP23-316E20, complete sequence Length = 202205 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 gtcgcagccgcagccgcagc 142 |||||||||||||||||||| Sbjct: 200205 gtcgcagccgcagccgcagc 200186
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 1068421 cgccgccgcagccgcagccgcagc 1068398
>emb|AL356173.2|NCB14D6 Neurospora crassa DNA linkage group II BAC contig B14D6 Length = 199386 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 cgtcgcagccgcagccgcag 141 |||||||||||||||||||| Sbjct: 56261 cgtcgcagccgcagccgcag 56242
>gb|AC090163.10| Homo sapiens chromosome 11, clone RP11-706A13, complete sequence Length = 194642 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 104982 cgccgccgcagccgcagccgcagc 105005
>gb|AC165445.1| Mus musculus BAC clone RP23-10J16 from chromosome 17, complete sequence Length = 209118 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 cgcagccgcagccgcagcgg 144 |||||||||||||||||||| Sbjct: 159680 cgcagccgcagccgcagcgg 159699 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 159668 cgccgccgcagccgcagccgcagc 159691
>dbj|AK061896.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-G11, full insert sequence Length = 2440 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 27 cgccgccgcagccgcagccgcagc 50
>gb|AC103854.2| Homo sapiens chromosome 11, clone RP11-104M24, complete sequence Length = 152529 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 26321 cgccgccgcagccgcagccgcagc 26344
>gb|AC083943.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0044A10, from chromosome 10, complete sequence Length = 169270 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 46742 cgccgccgcagccgcagccgcagc 46719
>emb|BX640473.9| Zebrafish DNA sequence from clone CH211-201F12 in linkage group 5, complete sequence Length = 193735 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gtcgcagccgcagccgcagc 142 |||||||||||||||||||| Sbjct: 13441 gtcgcagccgcagccgcagc 13460
>gb|AC011611.26| Homo sapiens 12 BAC RP11-290L1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 179085 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Minus Query: 111 gcccccgtcgccgtcgcagccgcagccgcagc 142 |||||| |||| | |||||||||||||||||| Sbjct: 119679 gcccccctcgcagccgcagccgcagccgcagc 119648
>dbj|AB218664.1| Homo sapiens BDTK mRNA for brain-derived tau kinase, complete cds Length = 6932 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 cagccgcagccgcagcgggc 146 |||||||||||||||||||| Sbjct: 1 cagccgcagccgcagcgggc 20
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 cgcagccgcagccgcagcgg 144 |||||||||||||||||||| Sbjct: 2143392 cgcagccgcagccgcagcgg 2143373
>gb|AC083868.3| Homo sapiens chromosome 7 clone RP11-148L5, complete sequence Length = 183541 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 ccgtcgcagccgcagccgcagcgg 144 ||||| |||||||||||||||||| Sbjct: 78464 ccgtcccagccgcagccgcagcgg 78441
>ref|NM_007623.2| Mus musculus chromobox homolog 2 (Drosophila Pc class) (Cbx2), mRNA Length = 3754 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 gccgcagcgggcggcggcatggag 158 ||||| |||||||||||||||||| Sbjct: 63 gccgcggcgggcggcggcatggag 86
>dbj|AK092346.1| Homo sapiens cDNA FLJ35027 fis, clone OCBBF2015599, highly similar to Homo sapiens partial ALX4 gene for homeodomain transcription factor ALX4 Length = 3193 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 431 cgccgccgcagccgcagccgcagc 454
>emb|CR607629.1| full-length cDNA clone CS0DK012YN13 of HeLa cells Cot 25-normalized of Homo sapiens (human) Length = 1567 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 111 gcccccgtcgccgtcgcagccgcagccgcagc 142 |||||| |||| | |||||||||||||||||| Sbjct: 762 gcccccctcgcagccgcagccgcagccgcagc 793
>emb|CR603389.1| full-length cDNA clone CS0DE011YC06 of Placenta of Homo sapiens (human) Length = 1600 Score = 40.1 bits (20), Expect = 2.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 111 gcccccgtcgccgtcgcagccgcagccgcagc 142 |||||| |||| | |||||||||||||||||| Sbjct: 764 gcccccctcgcagccgcagccgcagccgcagc 795
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gtcgcagccgcagccgcagc 142 |||||||||||||||||||| Sbjct: 834737 gtcgcagccgcagccgcagc 834756
>gb|DQ353852.1| Triticum aestivum AP2 domain transcription factor TaDREB2 mRNA, complete cds Length = 1043 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 168 cgcggcgtgcggaagcggccgtggggca 195 ||||||||||||| |||| ||||||||| Sbjct: 292 cgcggcgtgcggatgcgggcgtggggca 319
>gb|AC079037.3| Oryza sativa chromosome 10 clone OSJNBa0023I19, complete sequence Length = 157450 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 65874 cgccgccgcagccgcagccgcagc 65851
>dbj|AK151798.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830037L15 product:lamin B receptor, full insert sequence Length = 3600 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagc 142 |||||| ||||||||||||||||| Sbjct: 318 cgccgtggcagccgcagccgcagc 341
>dbj|AK157869.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930002A11 product:chromobox homolog 2 (Drosophila Pc class), full insert sequence Length = 3717 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 gccgcagcgggcggcggcatggag 158 ||||| |||||||||||||||||| Sbjct: 39 gccgcggcgggcggcggcatggag 62
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 gcagccgcagcgggcggcgg 151 |||||||||||||||||||| Sbjct: 1677217 gcagccgcagcgggcggcgg 1677236
>ref|NM_175472.3| Mus musculus zinc finger, CCHC domain containing 11 (Zcchc11), mRNA Length = 6054 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 111 gcccccgtcgccgtcgcagccgcagccg 138 ||||||||||||||||| ||||| |||| Sbjct: 312 gcccccgtcgccgtcgccgccgccgccg 285
>dbj|AK161762.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830469E03 product:lamin B receptor, full insert sequence Length = 2736 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagc 142 |||||| ||||||||||||||||| Sbjct: 329 cgccgtggcagccgcagccgcagc 352
>ref|NM_133815.1| Mus musculus lamin B receptor (Lbr), mRNA Length = 3494 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagc 142 |||||| ||||||||||||||||| Sbjct: 292 cgccgtggcagccgcagccgcagc 315
>dbj|AK167157.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0036D03 product:lamin B receptor, full insert sequence Length = 3456 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagc 142 |||||| ||||||||||||||||| Sbjct: 296 cgccgtggcagccgcagccgcagc 319
>dbj|AK166850.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0017E10 product:lamin B receptor, full insert sequence Length = 3463 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagc 142 |||||| ||||||||||||||||| Sbjct: 291 cgccgtggcagccgcagccgcagc 314
>gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 genomic sequence, complete sequence Length = 138824 Score = 40.1 bits (20), Expect = 2.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 107 cgcggcccccgtcgccgtcgcagccgcagccgcagc 142 ||||||||||| | ||| ||| |||||||||||||| Sbjct: 56607 cgcggcccccgccaccgccgccgccgcagccgcagc 56642
>dbj|AK088179.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430005J18 product:RAT NBP60 homolog [Rattus norvegicus], full insert sequence Length = 3504 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagc 142 |||||| ||||||||||||||||| Sbjct: 304 cgccgtggcagccgcagccgcagc 327
>dbj|AK041821.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630040F24 product:zinc finger, CCHC domain containing 11, full insert sequence Length = 1643 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 111 gcccccgtcgccgtcgcagccgcagccg 138 ||||||||||||||||| ||||| |||| Sbjct: 317 gcccccgtcgccgtcgccgccgccgccg 290
>dbj|AK033459.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched library, clone:9030210M07 product:lamin B receptor, full insert sequence Length = 2278 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagc 142 |||||| ||||||||||||||||| Sbjct: 303 cgccgtggcagccgcagccgcagc 326
>dbj|AK028426.1| Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:4432405I16 product:lamin B receptor, full insert sequence Length = 3495 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagc 142 |||||| ||||||||||||||||| Sbjct: 328 cgccgtggcagccgcagccgcagc 351
>dbj|AK030606.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length enriched library, clone:5330438A07 product:SIMILAR TO LAMIN B RECEPTOR homolog [Mus musculus], full insert sequence Length = 3497 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagc 142 |||||| ||||||||||||||||| Sbjct: 305 cgccgtggcagccgcagccgcagc 328
>dbj|AP003200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1046G12 Length = 163533 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 144 ggcggcggcatggagcccaggttc 167 |||||||||||||||||| ||||| Sbjct: 103766 ggcggcggcatggagcccgggttc 103743
>gb|AF194972.1|AF194972 Mus musculus developmental control protein mRNA, partial cds Length = 1168 Score = 40.1 bits (20), Expect = 2.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 111 gcccccgtcgccgtcgcagccgcagccg 138 ||||||||||||||||| ||||| |||| Sbjct: 77 gcccccgtcgccgtcgccgccgccgccg 50
>gb|AF294629.1|AF294629 Homo sapiens aristaless-like 4 (ALX4) mRNA, complete cds Length = 1583 Score = 40.1 bits (20), Expect = 2.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 119 cgccgtcgcagccgcagccgcagc 142 ||||| |||||||||||||||||| Sbjct: 406 cgccgccgcagccgcagccgcagc 429 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 863,884 Number of Sequences: 3902068 Number of extensions: 863884 Number of successful extensions: 87393 Number of sequences better than 10.0: 308 Number of HSP's better than 10.0 without gapping: 348 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 80997 Number of HSP's gapped (non-prelim): 6300 length of query: 208 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 186 effective length of database: 17,147,199,772 effective search space: 3189379157592 effective search space used: 3189379157592 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
