ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast75h06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY103972.1| Zea mays PCO108472 mRNA sequence Length = 1124 Score = 143 bits (72), Expect = 5e-31 Identities = 162/192 (84%) Strand = Plus / Plus Query: 209 cttctgcgacggaggacttgggattgaggatgtcagcggaggtgactctggtcttgggca 268 ||||||||||||||||||||||||||||| ||||| |||| || | ||| ||| ||| Sbjct: 217 cttctgcgacggaggacttgggattgagggtgtcaatggagatgcttgtggatttgagca 276 Query: 269 atctaatttggggaaaaggggcagagatgaacaatcttcatctggtccaaagtcaaaggc 328 ||||||||||| |||||||| |||||||||| || ||||||||||| ||| || || || Sbjct: 277 gtctaatttgggcaaaaggggtagagatgaaccatgttcatctggtctaaaatccaaagc 336 Query: 329 ttgccgcgagaaaatgcggagggagaaactgaatgacaggtttcttgaattatgttctgt 388 ||| || || |||||| ||||||| || |||||||||||||| || |||||| |||| || Sbjct: 337 ttgtcgtgaaaaaatgaggagggacaagctgaatgacaggttcctggaattaagttcggt 396 Query: 389 tatgaattctgg 400 ||||||| |||| Sbjct: 397 tatgaatcctgg 408
>gb|BT017900.1| Zea mays clone EL01N0516C03.c mRNA sequence Length = 1186 Score = 135 bits (68), Expect = 1e-28 Identities = 161/192 (83%) Strand = Plus / Plus Query: 209 cttctgcgacggaggacttgggattgaggatgtcagcggaggtgactctggtcttgggca 268 ||||||||||||||||||||||||||||| ||||| |||| || | ||| ||| ||| Sbjct: 167 cttctgcgacggaggacttgggattgagggtgtcaatggagatgcttgtggatttgagca 226 Query: 269 atctaatttggggaaaaggggcagagatgaacaatcttcatctggtccaaagtcaaaggc 328 ||||||||||| |||||| | |||||||||| || ||||||||||| ||| || || || Sbjct: 227 gtctaatttgggcaaaaggagtagagatgaaccatgttcatctggtctaaaatccaaagc 286 Query: 329 ttgccgcgagaaaatgcggagggagaaactgaatgacaggtttcttgaattatgttctgt 388 ||| || || |||||| ||||||| || |||||||||||||| || |||||| |||| || Sbjct: 287 ttgtcgtgaaaaaatgaggagggacaagctgaatgacaggttcctggaattaagttcggt 346 Query: 389 tatgaattctgg 400 ||||||| |||| Sbjct: 347 tatgaatcctgg 358
>ref|XM_507431.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1442_E05.19 mRNA Length = 1093 Score = 125 bits (63), Expect = 1e-25 Identities = 162/195 (83%) Strand = Plus / Plus Query: 212 ctgcgacggaggacttgggattgaggatgtcagcggaggtgactctggtcttgggcaatc 271 |||||| ||||||||||||||||| |||||||| |||| | | | | |||| ||||| Sbjct: 196 ctgcgatggaggacttgggattgatgatgtcagtggagatacttgttgccttgaccaatc 255 Query: 272 taatttggggaaaaggggcagagatgaacaatcttcatctggtccaaagtcaaaggcttg 331 | ||| |||||||| || ||||||||| ||| ||||||||||||||||| || ||||| Sbjct: 256 tgttttagggaaaagaggtagagatgaatcatcatcatctggtccaaagtccaaagcttg 315 Query: 332 ccgcgagaaaatgcggagggagaaactgaatgacaggtttcttgaattatgttctgttat 391 ||| |||||||| |||||||| | ||||||||||||||| ||||| |||| ||| ||||| Sbjct: 316 ccgtgagaaaattcggagggatagactgaatgacaggttccttgagttatcttccgttat 375 Query: 392 gaattctggcaagca 406 ||| ||| |||||| Sbjct: 376 caatcctgacaagca 390
>ref|XM_463878.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1093 Score = 125 bits (63), Expect = 1e-25 Identities = 162/195 (83%) Strand = Plus / Plus Query: 212 ctgcgacggaggacttgggattgaggatgtcagcggaggtgactctggtcttgggcaatc 271 |||||| ||||||||||||||||| |||||||| |||| | | | | |||| ||||| Sbjct: 196 ctgcgatggaggacttgggattgatgatgtcagtggagatacttgttgccttgaccaatc 255 Query: 272 taatttggggaaaaggggcagagatgaacaatcttcatctggtccaaagtcaaaggcttg 331 | ||| |||||||| || ||||||||| ||| ||||||||||||||||| || ||||| Sbjct: 256 tgttttagggaaaagaggtagagatgaatcatcatcatctggtccaaagtccaaagcttg 315 Query: 332 ccgcgagaaaatgcggagggagaaactgaatgacaggtttcttgaattatgttctgttat 391 ||| |||||||| |||||||| | ||||||||||||||| ||||| |||| ||| ||||| Sbjct: 316 ccgtgagaaaattcggagggatagactgaatgacaggttccttgagttatcttccgttat 375 Query: 392 gaattctggcaagca 406 ||| ||| |||||| Sbjct: 376 caatcctgacaagca 390
>ref|XM_506685.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1442_E05.19 mRNA Length = 1325 Score = 125 bits (63), Expect = 1e-25 Identities = 162/195 (83%) Strand = Plus / Plus Query: 212 ctgcgacggaggacttgggattgaggatgtcagcggaggtgactctggtcttgggcaatc 271 |||||| ||||||||||||||||| |||||||| |||| | | | | |||| ||||| Sbjct: 360 ctgcgatggaggacttgggattgatgatgtcagtggagatacttgttgccttgaccaatc 419 Query: 272 taatttggggaaaaggggcagagatgaacaatcttcatctggtccaaagtcaaaggcttg 331 | ||| |||||||| || ||||||||| ||| ||||||||||||||||| || ||||| Sbjct: 420 tgttttagggaaaagaggtagagatgaatcatcatcatctggtccaaagtccaaagcttg 479 Query: 332 ccgcgagaaaatgcggagggagaaactgaatgacaggtttcttgaattatgttctgttat 391 ||| |||||||| |||||||| | ||||||||||||||| ||||| |||| ||| ||||| Sbjct: 480 ccgtgagaaaattcggagggatagactgaatgacaggttccttgagttatcttccgttat 539 Query: 392 gaattctggcaagca 406 ||| ||| |||||| Sbjct: 540 caatcctgacaagca 554
>dbj|AK104188.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-B03, full insert sequence Length = 1093 Score = 125 bits (63), Expect = 1e-25 Identities = 162/195 (83%) Strand = Plus / Plus Query: 212 ctgcgacggaggacttgggattgaggatgtcagcggaggtgactctggtcttgggcaatc 271 |||||| ||||||||||||||||| |||||||| |||| | | | | |||| ||||| Sbjct: 196 ctgcgatggaggacttgggattgatgatgtcagtggagatacttgttgccttgaccaatc 255 Query: 272 taatttggggaaaaggggcagagatgaacaatcttcatctggtccaaagtcaaaggcttg 331 | ||| |||||||| || ||||||||| ||| ||||||||||||||||| || ||||| Sbjct: 256 tgttttagggaaaagaggtagagatgaatcatcatcatctggtccaaagtccaaagcttg 315 Query: 332 ccgcgagaaaatgcggagggagaaactgaatgacaggtttcttgaattatgttctgttat 391 ||| |||||||| |||||||| | ||||||||||||||| ||||| |||| ||| ||||| Sbjct: 316 ccgtgagaaaattcggagggatagactgaatgacaggttccttgagttatcttccgttat 375 Query: 392 gaattctggcaagca 406 ||| ||| |||||| Sbjct: 376 caatcctgacaagca 390
>dbj|AK103434.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129B02, full insert sequence Length = 1325 Score = 125 bits (63), Expect = 1e-25 Identities = 162/195 (83%) Strand = Plus / Plus Query: 212 ctgcgacggaggacttgggattgaggatgtcagcggaggtgactctggtcttgggcaatc 271 |||||| ||||||||||||||||| |||||||| |||| | | | | |||| ||||| Sbjct: 360 ctgcgatggaggacttgggattgatgatgtcagtggagatacttgttgccttgaccaatc 419 Query: 272 taatttggggaaaaggggcagagatgaacaatcttcatctggtccaaagtcaaaggcttg 331 | ||| |||||||| || ||||||||| ||| ||||||||||||||||| || ||||| Sbjct: 420 tgttttagggaaaagaggtagagatgaatcatcatcatctggtccaaagtccaaagcttg 479 Query: 332 ccgcgagaaaatgcggagggagaaactgaatgacaggtttcttgaattatgttctgttat 391 ||| |||||||| |||||||| | ||||||||||||||| ||||| |||| ||| ||||| Sbjct: 480 ccgtgagaaaattcggagggatagactgaatgacaggttccttgagttatcttccgttat 539 Query: 392 gaattctggcaagca 406 ||| ||| |||||| Sbjct: 540 caatcctgacaagca 554
>dbj|AK060881.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-A10, full insert sequence Length = 1093 Score = 125 bits (63), Expect = 1e-25 Identities = 162/195 (83%) Strand = Plus / Plus Query: 212 ctgcgacggaggacttgggattgaggatgtcagcggaggtgactctggtcttgggcaatc 271 |||||| ||||||||||||||||| |||||||| |||| | | | | |||| ||||| Sbjct: 196 ctgcgatggaggacttgggattgatgatgtcagtggagatacttgttgccttgaccaatc 255 Query: 272 taatttggggaaaaggggcagagatgaacaatcttcatctggtccaaagtcaaaggcttg 331 | ||| |||||||| || ||||||||| ||| ||||||||||||||||| || ||||| Sbjct: 256 tgttttagggaaaagaggtagagatgaatcatcatcatctggtccaaagtccaaagcttg 315 Query: 332 ccgcgagaaaatgcggagggagaaactgaatgacaggtttcttgaattatgttctgttat 391 ||| |||||||| |||||||| | ||||||||||||||| ||||| |||| ||| ||||| Sbjct: 316 ccgtgagaaaattcggagggatagactgaatgacaggttccttgagttatcttccgttat 375 Query: 392 gaattctggcaagca 406 ||| ||| |||||| Sbjct: 376 caatcctgacaagca 390
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 85.7 bits (43), Expect = 1e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 291 agagatgaacaatcttcatctggtccaaagtcaaaggcttgccgcgagaaaatgcggagg 350 ||||||||| ||| ||||||||||||||||| || |||||||| |||||||| |||||| Sbjct: 877298 agagatgaatcatcatcatctggtccaaagtccaaagcttgccgtgagaaaattcggagg 877239 Query: 351 gagaaactgaatgacaggt 369 || | |||||||||||||| Sbjct: 877238 gatagactgaatgacaggt 877220 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 170 cgggggcggcgccggcgacggcggggacggcc 201 |||||||| |||||||||||||| ||| |||| Sbjct: 30612103 cgggggcgacgccggcgacggcgaggaaggcc 30612134 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 gcgccggcgacggcggggacggcc 201 ||||||||||||||||||| |||| Sbjct: 5732029 gcgccggcgacggcggggatggcc 5732052
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1442_E05 Length = 162407 Score = 85.7 bits (43), Expect = 1e-13 Identities = 70/79 (88%) Strand = Plus / Minus Query: 291 agagatgaacaatcttcatctggtccaaagtcaaaggcttgccgcgagaaaatgcggagg 350 ||||||||| ||| ||||||||||||||||| || |||||||| |||||||| |||||| Sbjct: 86506 agagatgaatcatcatcatctggtccaaagtccaaagcttgccgtgagaaaattcggagg 86447 Query: 351 gagaaactgaatgacaggt 369 || | |||||||||||||| Sbjct: 86446 gatagactgaatgacaggt 86428
>gb|AC145767.28| Medicago truncatula clone mth2-11f1, complete sequence Length = 134401 Score = 54.0 bits (27), Expect = 4e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 322 caaaggcttgccgcgagaaaatgcggagggagaaactgaatga 364 |||| |||||||| |||||| |||||||||||||||| ||||| Sbjct: 23365 caaaagcttgccgtgagaaattgcggagggagaaactcaatga 23323
>gb|AY104804.1| Zea mays PCO132093 mRNA sequence Length = 1144 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 339 aaaatgcggagggagaaactgaatgacaggtttcttgaatt 379 |||||| ||||| | || ||||||||||||||||||||||| Sbjct: 341 aaaatgaggaggaacaagctgaatgacaggtttcttgaatt 381
>ref|XM_541723.2| PREDICTED: Canis familiaris similar to zinc finger protein 536 (LOC484609), mRNA Length = 4368 Score = 46.1 bits (23), Expect = 0.096 Identities = 26/27 (96%) Strand = Plus / Plus Query: 176 cggcgccggcgacggcggggacggcct 202 ||||| ||||||||||||||||||||| Sbjct: 3693 cggcggcggcgacggcggggacggcct 3719
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 171 gggggcggcgccggcgacggcgggga 196 ||||| |||||||||||||||||||| Sbjct: 28261877 ggggggggcgccggcgacggcgggga 28261852 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 166 tcctcgggggcggcgccggcgacggcggggacg 198 ||||||| ||||||| ||||||||||| ||||| Sbjct: 34601141 tcctcggtggcggcgtcggcgacggcgaggacg 34601109 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 cggcgccggcgacggcgggg 195 |||||||||||||||||||| Sbjct: 12547712 cggcgccggcgacggcgggg 12547693 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 cggcgccggcgacggcgggg 195 |||||||||||||||||||| Sbjct: 8434654 cggcgccggcgacggcgggg 8434635 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 cggcgccggcgacggcgggg 195 |||||||||||||||||||| Sbjct: 7676256 cggcgccggcgacggcgggg 7676275
>gb|AC087797.5| Oryza sativa chromosome 3 BAC OSJNBb0022E02 genomic sequence, complete sequence Length = 122497 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 171 gggggcggcgccggcgacggcgggga 196 ||||| |||||||||||||||||||| Sbjct: 113018 ggggggggcgccggcgacggcgggga 112993
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 171 gggggcggcgccggcgacggcgggga 196 ||||| |||||||||||||||||||| Sbjct: 28353201 ggggggggcgccggcgacggcgggga 28353176 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 166 tcctcgggggcggcgccggcgacggcggggacg 198 ||||||| ||||||| ||||||||||| ||||| Sbjct: 34691213 tcctcggtggcggcgtcggcgacggcgaggacg 34691181 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 cggcgccggcgacggcgggg 195 |||||||||||||||||||| Sbjct: 12544475 cggcgccggcgacggcgggg 12544456 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 cggcgccggcgacggcgggg 195 |||||||||||||||||||| Sbjct: 8432489 cggcgccggcgacggcgggg 8432470 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 cggcgccggcgacggcgggg 195 |||||||||||||||||||| Sbjct: 7674091 cggcgccggcgacggcgggg 7674110
>ref|XM_483207.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1078 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 170 cgggggcggcgccggcgacggcggg 194 ||||| ||||||||||||||||||| Sbjct: 203 cggggacggcgccggcgacggcggg 179
>ref|NM_185087.1| Oryza sativa (japonica cultivar-group), mRNA Length = 783 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 166 tcctcgggggcggcgccggcgacggcggggacg 198 ||||||| ||||||| ||||||||||| ||||| Sbjct: 164 tcctcggtggcggcgtcggcgacggcgaggacg 132
>ref|NM_197508.1| Oryza sativa (japonica cultivar-group) putative transcription factor (OSJNBa0053C23.13), mRNA Length = 1203 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 164 cctcctcgggggcggcgccggcgacggcg 192 ||||||| ||||||||||||||| ||||| Sbjct: 492 cctcctctggggcggcgccggcggcggcg 520
>gb|AC121116.7| Mus musculus chromosome 8, clone RP23-267D22, complete sequence Length = 200891 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 170 cgggggcggcgccggcgacggcggg 194 ||||||||||||||| ||||||||| Sbjct: 68684 cgggggcggcgccggggacggcggg 68708
>gb|AC113948.5| Oryza sativa chromosome 10 BAC OSJNBb0038A07 genomic sequence, complete sequence Length = 132900 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 164 cctcctcgggggcggcgccggcgacggcg 192 ||||||| ||||||||||||||| ||||| Sbjct: 22949 cctcctctggggcggcgccggcggcggcg 22977
>gb|AC133339.3| Oryza sativa chromosome 3 BAC OSJNBa0078D06 genomic sequence, complete sequence Length = 164236 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 166 tcctcgggggcggcgccggcgacggcggggacg 198 ||||||| ||||||| ||||||||||| ||||| Sbjct: 58858 tcctcggtggcggcgtcggcgacggcgaggacg 58826
>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16 Length = 348706 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 174 ggcggcgccggcgacggcggggacggcct 202 ||||||| ||||||||||||| ||||||| Sbjct: 122423 ggcggcggcggcgacggcgggcacggcct 122451
>gb|AC092389.4| Oryza sativa chromosome 10 BAC OSJNBa0053C23 genomic sequence, complete sequence Length = 194361 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 164 cctcctcgggggcggcgccggcgacggcg 192 ||||||| ||||||||||||||| ||||| Sbjct: 21277 cctcctctggggcggcgccggcggcggcg 21249
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 164 cctcctcgggggcggcgccggcgacggcg 192 ||||||| ||||||||||||||| ||||| Sbjct: 20143542 cctcctctggggcggcgccggcggcggcg 20143514 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 gcggcgccggcgacggcggggacg 198 ||||||||||||||||||| |||| Sbjct: 21397214 gcggcgccggcgacggcggcgacg 21397191 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gggcggcgccggcgacggcg 192 |||||||||||||||||||| Sbjct: 19577010 gggcggcgccggcgacggcg 19577029
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 170 cgggggcggcgccggcgacggcggg 194 ||||| ||||||||||||||||||| Sbjct: 24812014 cggggacggcgccggcgacggcggg 24812038 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 tcgggggcggcgccggcgacggcg 192 |||| ||||||||||||||||||| Sbjct: 5451310 tcggcggcggcgccggcgacggcg 5451287
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 cgggggcggcgccggcgacgg 190 ||||||||||||||||||||| Sbjct: 2380685 cgggggcggcgccggcgacgg 2380705 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 cggcgccggcgacggcgggg 195 |||||||||||||||||||| Sbjct: 8583040 cggcgccggcgacggcgggg 8583021
>gb|AC155714.6| Mus musculus 10 BAC RP24-165I13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 167195 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 290 cagagatgaacaatcttcatc 310 ||||||||||||||||||||| Sbjct: 140249 cagagatgaacaatcttcatc 140229
>gb|AC133778.4| Oryza sativa chromosome 3 BAC OSJNBb0027B08 genomic sequence, complete sequence Length = 129302 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 166 tcctcgggggcggcgccggcgacggcggggacg 198 ||||||| ||||||| ||||||||||| ||||| Sbjct: 42192 tcctcggtggcggcgtcggcgacggcgaggacg 42224
>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1345_D02 Length = 159613 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 170 cgggggcggcgccggcgacggcggg 194 ||||| ||||||||||||||||||| Sbjct: 112815 cggggacggcgccggcgacggcggg 112839
>dbj|AP003767.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0036F10 Length = 149415 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 cgggggcggcgccggcgacgg 190 ||||||||||||||||||||| Sbjct: 12143 cgggggcggcgccggcgacgg 12163
>dbj|AP003487.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0007O20 Length = 147363 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 cgggggcggcgccggcgacgg 190 ||||||||||||||||||||| Sbjct: 102486 cgggggcggcgccggcgacgg 102506
>dbj|AP004190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1506_F01 Length = 121202 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 170 cgggggcggcgccggcgacggcggg 194 ||||| ||||||||||||||||||| Sbjct: 16460 cggggacggcgccggcgacggcggg 16484
>dbj|AK109544.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-D08, full insert sequence Length = 2223 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 cgggggcggcgccggcgacgg 190 ||||||||||||||||||||| Sbjct: 980 cgggggcggcgccggcgacgg 1000
>dbj|AK108607.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-H05, full insert sequence Length = 1505 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 164 cctcctcgggggcggcgccggcgacggcg 192 ||||||| ||||||||||||||| ||||| Sbjct: 596 cctcctctggggcggcgccggcggcggcg 624
>dbj|AK106964.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-F09, full insert sequence Length = 1077 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 170 cgggggcggcgccggcgacggcggg 194 ||||| ||||||||||||||||||| Sbjct: 203 cggggacggcgccggcgacggcggg 179
>gb|AY108968.1| Zea mays PCO132092 mRNA sequence Length = 1244 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 357 ctgaatgacaggtttcttgaa 377 ||||||||||||||||||||| Sbjct: 366 ctgaatgacaggtttcttgaa 386
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 164 cctcctcgggggcggcgccggcgacggcg 192 ||||||| ||||||||||||||| ||||| Sbjct: 20154818 cctcctctggggcggcgccggcggcggcg 20154790 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 gcggcgccggcgacggcggggacg 198 ||||||||||||||||||| |||| Sbjct: 21408477 gcggcgccggcgacggcggcgacg 21408454 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gggcggcgccggcgacggcg 192 |||||||||||||||||||| Sbjct: 19588286 gggcggcgccggcgacggcg 19588305
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 246 ggaggtgactctggtcttggg 266 ||||||||||||||||||||| Sbjct: 3451007 ggaggtgactctggtcttggg 3450987
>gb|AC125495.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0085M22, complete sequence Length = 145104 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 cggcgccggcgacggcgggg 195 |||||||||||||||||||| Sbjct: 58197 cggcgccggcgacggcgggg 58178
>ref|XM_480499.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1455 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 tcgggggcggcgccggcgacggcg 192 |||| ||||||||||||||||||| Sbjct: 171 tcggcggcggcgccggcgacggcg 148
>ref|XM_475739.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1572 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 gcgccggcgacggcggggac 197 |||||||||||||||||||| Sbjct: 1241 gcgccggcgacggcggggac 1260
>ref|XM_467648.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1649 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 170 cgggggcggcgccggcgacggcggggacggcc 201 |||||||| |||||||||||||| ||| |||| Sbjct: 117 cgggggcgacgccggcgacggcgaggaaggcc 148
>ref|NM_197383.1| Oryza sativa (japonica cultivar-group) putaive mitochondrial inner membrane protein (OSJNBb0018B10.5), mRNA Length = 588 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gggcggcgccggcgacggcg 192 |||||||||||||||||||| Sbjct: 250 gggcggcgccggcgacggcg 231
>ref|XM_473803.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1401 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gggcggcgccggcgacggcg 192 |||||||||||||||||||| Sbjct: 81 gggcggcgccggcgacggcg 62
>gb|AC105772.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1504_G04, complete sequence Length = 88812 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 ccggcgacggcggggacggc 200 |||||||||||||||||||| Sbjct: 63749 ccggcgacggcggggacggc 63768
>gb|AC108223.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019A16, complete sequence Length = 175425 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 ggcggcgccggcgacggcgg 193 |||||||||||||||||||| Sbjct: 114548 ggcggcgccggcgacggcgg 114567
>gb|AC119214.6| Mus musculus chromosome 8, clone RP24-199K4, complete sequence Length = 156548 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 308 atctggtccaaagtcaaaggcttg 331 |||||||| ||||||||||||||| Sbjct: 66071 atctggtcaaaagtcaaaggcttg 66094
>gb|AC130607.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0017D10, complete sequence Length = 149870 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 gggggcggcgccggcgacggcggg 194 |||||||||||||||| ||||||| Sbjct: 9544 gggggcggcgccggcgccggcggg 9521
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 ccggcgacggcggggacggc 200 |||||||||||||||||||| Sbjct: 3928169 ccggcgacggcggggacggc 3928188
>gb|AC130729.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0668F02, complete sequence Length = 178061 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 gggggcggcgccggcgacggcggg 194 |||||||||||||||| ||||||| Sbjct: 152381 gggggcggcgccggcgccggcggg 152358
>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05, complete sequence Length = 196284 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gcgccggcgacggcggggac 197 |||||||||||||||||||| Sbjct: 1509 gcgccggcgacggcggggac 1490
>gb|AC111015.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1131_E09, complete sequence Length = 94399 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gcgccggcgacggcggggac 197 |||||||||||||||||||| Sbjct: 67801 gcgccggcgacggcggggac 67782
>gb|AC134885.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1125B03, from chromosome 3, complete sequence Length = 124550 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 cggcgccggcgacggcgggg 195 |||||||||||||||||||| Sbjct: 40229 cggcgccggcgacggcgggg 40248
>emb|BX842583.1| Mycobacterium tuberculosis H37Rv complete genome; segment 12/13 Length = 349606 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 ccggcgacggcggggacggc 200 |||||||||||||||||||| Sbjct: 117688 ccggcgacggcggggacggc 117707
>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29 Length = 300100 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 cctcgggggcggcgccggcg 186 |||||||||||||||||||| Sbjct: 72261 cctcgggggcggcgccggcg 72280
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 ggcggcgccggcgacggcgg 193 |||||||||||||||||||| Sbjct: 103197 ggcggcgccggcgacggcgg 103216
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gggcggcgccggcgacggcg 192 |||||||||||||||||||| Sbjct: 120008 gggcggcgccggcgacggcg 120027
>emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035M09, complete sequence Length = 152732 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gggcggcgccggcgacggcg 192 |||||||||||||||||||| Sbjct: 48031 gggcggcgccggcgacggcg 48050
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 146 cgacccggtagaggaattcc 165 |||||||||||||||||||| Sbjct: 162503 cgacccggtagaggaattcc 162484
>gb|AC131175.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0030D15, from chromosome 3, complete sequence Length = 151972 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 cggcgccggcgacggcgggg 195 |||||||||||||||||||| Sbjct: 129277 cggcgccggcgacggcgggg 129296
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0096L14, from chromosome 3, complete sequence Length = 131142 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 cggcgccggcgacggcgggg 195 |||||||||||||||||||| Sbjct: 39034 cggcgccggcgacggcgggg 39015
>gb|AE005799.1| Caulobacter crescentus CB15 section 125 of 359 of the complete genome Length = 14548 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 168 ctcgggggcggcgccggcgacggc 191 |||| ||||||||||||||||||| Sbjct: 10962 ctcgcgggcggcgccggcgacggc 10985
>gb|AE005751.1| Caulobacter crescentus CB15 section 77 of 359 of the complete genome Length = 11570 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 170 cgggggcggcgccggcgacggcgg 193 |||||||||||| ||||||||||| Sbjct: 10629 cgggggcggcgcaggcgacggcgg 10652
>gb|AC087269.5| Homo sapiens chromosome 8, clone RP11-211C9, complete sequence Length = 187924 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 gcaatctaatttggggaaaa 285 |||||||||||||||||||| Sbjct: 68380 gcaatctaatttggggaaaa 68399
>dbj|AB217538.1| Brachypeza zamboangensis genes for ITS1, 5.8S rRNA, ITS2, specimen_voucher:TBG145835 Length = 649 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 cggcgacggcggggacggcc 201 |||||||||||||||||||| Sbjct: 91 cggcgacggcggggacggcc 72
>dbj|AB217537.1| Brachypeza indusiata genes for ITS1, 5.8S rRNA, ITS2, specimen_voucher:B995112733 Length = 649 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 cggcgacggcggggacggcc 201 |||||||||||||||||||| Sbjct: 91 cggcgacggcggggacggcc 72
>gb|AC109458.3| Homo sapiens chromosome 5 clone RP11-257I8, complete sequence Length = 162191 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 aatctaatttggggaaaagg 287 |||||||||||||||||||| Sbjct: 132089 aatctaatttggggaaaagg 132070
>gb|AC110009.3| Homo sapiens chromosome 5 clone RP11-508M8, complete sequence Length = 137632 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 268 aatctaatttggggaaaagg 287 |||||||||||||||||||| Sbjct: 119039 aatctaatttggggaaaagg 119058
>gb|AC051634.6| Oryza sativa chromosome 10 BAC OSJNBb0018B10 genomic sequence, complete sequence Length = 135789 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gggcggcgccggcgacggcg 192 |||||||||||||||||||| Sbjct: 34201 gggcggcgccggcgacggcg 34220
>gb|AC069300.7| Oryza sativa chromosome 10 BAC OSJNBa0010C11 genomic sequence, complete sequence Length = 147117 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 175 gcggcgccggcgacggcggggacg 198 ||||||||||||||||||| |||| Sbjct: 72227 gcggcgccggcgacggcggcgacg 72204
>gb|AY027524.1| Frankia sp. CpI1 plasmid pFQ12, complete plasmid sequence Length = 22437 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 ggcggcgccggcgacggcgg 193 |||||||||||||||||||| Sbjct: 16356 ggcggcgccggcgacggcgg 16337
>ref|NM_136061.1| Drosophila melanogaster CG15166-RA (CG15166), mRNA Length = 366 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gacgatggacggcggcgacc 150 |||||||||||||||||||| Sbjct: 342 gacgatggacggcggcgacc 323
>gb|AC158352.5| Mus musculus chromosome 8, clone RP24-325B16, complete sequence Length = 166845 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 308 atctggtccaaagtcaaaggcttg 331 |||||||| ||||||||||||||| Sbjct: 158454 atctggtcaaaagtcaaaggcttg 158477
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 188 cggcggggacggcctctccgcctt 211 |||||||||||||||| ||||||| Sbjct: 1781722 cggcggggacggcctcaccgcctt 1781699
>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence Length = 140234 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 ccggcgacggcggggacggc 200 |||||||||||||||||||| Sbjct: 82131 ccggcgacggcggggacggc 82112
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 gggcggcgccggcgacggcg 192 |||||||||||||||||||| Sbjct: 30644300 gggcggcgccggcgacggcg 30644319
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 ggcggcgccggcgacggcgg 193 |||||||||||||||||||| Sbjct: 25539074 ggcggcgccggcgacggcgg 25539055 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 ggcggcgccggcgacggcgg 193 |||||||||||||||||||| Sbjct: 19475493 ggcggcgccggcgacggcgg 19475474
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 ggcggcgccggcgacggcgg 193 |||||||||||||||||||| Sbjct: 19245760 ggcggcgccggcgacggcgg 19245779
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 cggcgccggcgacggcgggg 195 |||||||||||||||||||| Sbjct: 1540476 cggcgccggcgacggcgggg 1540495
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gcgccggcgacggcggggac 197 |||||||||||||||||||| Sbjct: 26150461 gcgccggcgacggcggggac 26150442 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 171 gggggcggcgccggcgacggcggg 194 |||||||||||||||| ||||||| Sbjct: 20011219 gggggcggcgccggcgccggcggg 20011196 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 ccggcgacggcggggacggc 200 |||||||||||||||||||| Sbjct: 2785423 ccggcgacggcggggacggc 2785442
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 tttggggaaaaggggcagagatga 298 ||||||||||||||| |||||||| Sbjct: 23161497 tttggggaaaagggggagagatga 23161520
>gb|AC009203.5|AC009203 Drosophila melanogaster, chromosome 2L, region 36E-37C, BAC clone BACR07J05, complete sequence Length = 172061 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gacgatggacggcggcgacc 150 |||||||||||||||||||| Sbjct: 18568 gacgatggacggcggcgacc 18549
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 176 cggcgccggcgacggcggggacggcctc 203 |||||||| || |||||||||||||||| Sbjct: 3053675 cggcgccgccggcggcggggacggcctc 3053702
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 337 agaaaatgcggagggagaaa 356 |||||||||||||||||||| Sbjct: 989502 agaaaatgcggagggagaaa 989521
>dbj|AP005441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056O06 Length = 151038 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 169 tcgggggcggcgccggcgacggcg 192 |||| ||||||||||||||||||| Sbjct: 121121 tcggcggcggcgccggcgacggcg 121098
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 cctcctcgggggcggcgccg 183 |||||||||||||||||||| Sbjct: 1072704 cctcctcgggggcggcgccg 1072723
>dbj|AP004630.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0031A09 Length = 162511 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 cggcgccggcgacggcgggg 195 |||||||||||||||||||| Sbjct: 57859 cggcgccggcgacggcgggg 57840
>dbj|AP003048.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710A02 Length = 157201 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 275 tttggggaaaaggggcagagatga 298 ||||||||||||||| |||||||| Sbjct: 93656 tttggggaaaagggggagagatga 93679
>dbj|AP006172.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0088O14 Length = 179483 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 cggcgccggcgacggcgggg 195 |||||||||||||||||||| Sbjct: 9131 cggcgccggcgacggcgggg 9150
>dbj|AP006451.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1249D05 Length = 132526 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 176 cggcgccggcgacggcgggg 195 |||||||||||||||||||| Sbjct: 126065 cggcgccggcgacggcgggg 126084
>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643A10 Length = 187931 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 170 cgggggcggcgccggcgacggcggggacggcc 201 |||||||| |||||||||||||| ||| |||| Sbjct: 124111 cgggggcgacgccggcgacggcgaggaaggcc 124142
>dbj|AP004869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0419A09 Length = 168064 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 gcgccggcgacggcggggacggcc 201 ||||||||||||||||||| |||| Sbjct: 159765 gcgccggcgacggcggggatggcc 159788
>dbj|AP004045.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1135_F06 Length = 102230 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 gcgccggcgacggcggggacggcc 201 ||||||||||||||||||| |||| Sbjct: 21543 gcgccggcgacggcggggatggcc 21566
>dbj|AK121645.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033058C09, full insert sequence Length = 1649 Score = 40.1 bits (20), Expect = 5.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 170 cgggggcggcgccggcgacggcggggacggcc 201 |||||||| |||||||||||||| ||| |||| Sbjct: 117 cgggggcgacgccggcgacggcgaggaaggcc 148
>dbj|AK107812.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-F03, full insert sequence Length = 944 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gggcggcgccggcgacggcg 192 |||||||||||||||||||| Sbjct: 355 gggcggcgccggcgacggcg 336
>dbj|AK105836.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E12, full insert sequence Length = 1511 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gggcggcgccggcgacggcg 192 |||||||||||||||||||| Sbjct: 91 gggcggcgccggcgacggcg 72
>dbj|AK073495.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044F12, full insert sequence Length = 1526 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 gggcggcgccggcgacggcg 192 |||||||||||||||||||| Sbjct: 106 gggcggcgccggcgacggcg 87
>dbj|AK071672.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107C12, full insert sequence Length = 1288 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 178 gcgccggcgacggcggggacggcc 201 ||||||||||||||||||| |||| Sbjct: 145 gcgccggcgacggcggggatggcc 122
>dbj|AK070081.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023044K03, full insert sequence Length = 2025 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 181 ccggcgacggcggggacggc 200 |||||||||||||||||||| Sbjct: 126 ccggcgacggcggggacggc 145
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 cacggccgccgagacgatgg 138 |||||||||||||||||||| Sbjct: 1923084 cacggccgccgagacgatgg 1923103
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 cacggccgccgagacgatgg 138 |||||||||||||||||||| Sbjct: 3441370 cacggccgccgagacgatgg 3441389
>gb|AC007137.20|AC007137 Drosophila melanogaster, chromosome 2L, region 36E-, BAC clone BACR25C02, complete sequence Length = 171454 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gacgatggacggcggcgacc 150 |||||||||||||||||||| Sbjct: 158170 gacgatggacggcggcgacc 158151
>gb|AF125260.1|AF125260 Rhodobacter sphaeroides f. sp. denitrificans nitrous oxide reductase operon, partial sequence Length = 5419 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 170 cgggggcggcgccggcgacggcgg 193 |||||||||| ||||||||||||| Sbjct: 1882 cgggggcggccccggcgacggcgg 1859
>gb|AE003660.2| Drosophila melanogaster chromosome 2L, section 69 of 83 of the complete sequence Length = 232737 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gacgatggacggcggcgacc 150 |||||||||||||||||||| Sbjct: 44328 gacgatggacggcggcgacc 44309
>emb|AL136000.4|CNS01DVQ Human chromosome 14 DNA sequence BAC R-860P2 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 201587 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 174 ggcggcgccggcgacggcggggac 197 ||||||| |||||||||||||||| Sbjct: 93726 ggcggcgacggcgacggcggggac 93749
>emb|AJ420603.2|HSA420603 Homo sapiens partial EMAP gene for echinoderm microtubule associated protein, exon 1 and joined CDS Length = 295 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 174 ggcggcgccggcgacggcggggac 197 ||||||| |||||||||||||||| Sbjct: 117 ggcggcgacggcgacggcggggac 140
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 ggcggcgccggcgacggcgg 193 |||||||||||||||||||| Sbjct: 19405309 ggcggcgccggcgacggcgg 19405328
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 ggcggcgccggcgacggcgg 193 |||||||||||||||||||| Sbjct: 25467250 ggcggcgccggcgacggcgg 25467231 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 ggcggcgccggcgacggcgg 193 |||||||||||||||||||| Sbjct: 19401706 ggcggcgccggcgacggcgg 19401687
>emb|AL928781.4|CNS08CCB Oryza sativa chromosome 12, . BAC OSJNBa0070E09 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144084 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 ggcggcgccggcgacggcgg 193 |||||||||||||||||||| Sbjct: 108456 ggcggcgccggcgacggcgg 108437
>emb|AL954828.3|CNS08CD4 Oryza sativa chromosome 12, . BAC OSJNBa0022M02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 163490 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 ggcggcgccggcgacggcgg 193 |||||||||||||||||||| Sbjct: 153187 ggcggcgccggcgacggcgg 153168
>emb|AL731759.2|CNS07YPA Oryza sativa chromosome 12, . BAC OSJNBa0009K11 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144596 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 ggcggcgccggcgacggcgg 193 |||||||||||||||||||| Sbjct: 7674 ggcggcgccggcgacggcgg 7655 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,909,009 Number of Sequences: 3902068 Number of extensions: 2909009 Number of successful extensions: 74281 Number of sequences better than 10.0: 112 Number of HSP's better than 10.0 without gapping: 128 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 70599 Number of HSP's gapped (non-prelim): 3678 length of query: 439 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 417 effective length of database: 17,147,199,772 effective search space: 7150382304924 effective search space used: 7150382304924 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
