| Clone Name | bast75h05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC092675.2| Homo sapiens BAC clone RP11-629A22 from 2, complete sequence Length = 153551 Score = 44.1 bits (22), Expect = 0.095 Identities = 22/22 (100%) Strand = Plus / Plus Query: 85 gcacaaggcaagctgagtccgg 106 |||||||||||||||||||||| Sbjct: 123511 gcacaaggcaagctgagtccgg 123532
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 42.1 bits (21), Expect = 0.38 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 gagatcgatccatcgaggagc 58 ||||||||||||||||||||| Sbjct: 1020005 gagatcgatccatcgaggagc 1019985
>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome Length = 4222334 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 atcagctgagatcgatccat 50 |||||||||||||||||||| Sbjct: 67055 atcagctgagatcgatccat 67074
>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome Length = 4222645 Score = 40.1 bits (20), Expect = 1.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 atcagctgagatcgatccat 50 |||||||||||||||||||| Sbjct: 66856 atcagctgagatcgatccat 66875
>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0108E17, complete sequence Length = 139829 Score = 40.1 bits (20), Expect = 1.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 atcgatccatcgaggagctagcta 64 ||||||||||||| |||||||||| Sbjct: 101271 atcgatccatcgatgagctagcta 101248
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 1.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 atcgatccatcgaggagctagcta 64 ||||||||||||| |||||||||| Sbjct: 25032418 atcgatccatcgatgagctagcta 25032395
>gb|AF366565.1| Triticum aestivum aquaporin PIP2 (Pip2) mRNA, complete cds Length = 1071 Score = 40.1 bits (20), Expect = 1.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 94 aagctgagtccggatgccatcgacaacgaagt 125 ||||| |||||||| ||||| ||||||||||| Sbjct: 17 aagctaagtccggaggccatggacaacgaagt 48
>gb|AC163991.3| Mus musculus chromosome 15, clone RP24-119L11, complete sequence Length = 152173 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 82 gcagcacaaggcaagctga 100 ||||||||||||||||||| Sbjct: 91581 gcagcacaaggcaagctga 91599
>emb|AM039801.1| Ficus insipida microsatellite DNA, clone FinsI12 Length = 437 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Plus Query: 9 caatctccgccactgcaga 27 ||||||||||||||||||| Sbjct: 64 caatctccgccactgcaga 82
>emb|AL035252.5|HS738P15 Human DNA sequence from clone RP4-738P15 on chromosome 20p11.2-11.22 Contains a novel gene (LOC284798), a novel pseudogene, the ENTPD6 gene for ectonucleoside triphosphate diphosphohydrolase 6 (putative function) and two CpG islands, complete sequence Length = 108487 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 82 gcagcacaaggcaagctgagtcc 104 |||||||||| |||||||||||| Sbjct: 82904 gcagcacaagacaagctgagtcc 82926
>gb|AC019206.4| Homo sapiens BAC clone RP11-401N16 from 2, complete sequence Length = 207818 Score = 38.2 bits (19), Expect = 5.9 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 gccactgcagattaatcag 35 ||||||||||||||||||| Sbjct: 35760 gccactgcagattaatcag 35742
>emb|AL731805.8| Mouse DNA sequence from clone RP23-358E19 on chromosome 11, complete sequence Length = 111002 Score = 38.2 bits (19), Expect = 5.9 Identities = 22/23 (95%) Strand = Plus / Plus Query: 89 aaggcaagctgagtccggatgcc 111 ||||||||||||||| ||||||| Sbjct: 34468 aaggcaagctgagtctggatgcc 34490 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 745,128 Number of Sequences: 3902068 Number of extensions: 745128 Number of successful extensions: 45296 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 45190 Number of HSP's gapped (non-prelim): 106 length of query: 126 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 105 effective length of database: 17,151,101,840 effective search space: 1800865693200 effective search space used: 1800865693200 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)