ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast75h04 |
|---|---|
| Clone Library Name | barley_pub |
>ENV_SMRVH (P21412) Env polyprotein precursor (Coat polyprotein) [Contains:| Outer membrane protein; Coat protein GP20] Length = 575 Score = 34.7 bits (78), Expect = 0.12 Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 15/113 (13%) Frame = -3 Query: 371 AEHCFLLLRLSASSSVTCPPNTTLWIASDGWCGRRLGGGVAPSTSS--GCAPSGHASRSA 198 A++C+L L S + P N + + AS C L V P S C G + S Sbjct: 246 AQNCWLCLNQGTSMPLAFPVNISSFNASQNNCTPSLPFRVQPMPSQVYPCFFKGAQNNS- 304 Query: 197 VLVWDFLTGAGLSISSSSATAKAR---PGPG----------FLSLPARWGSSC 78 +D G ++ SS++ + PGPG F +LPA W SC Sbjct: 305 ---FDIPVGVANFVNCSSSSNHSEALCPGPGQAFVCGNNLAFTALPANWTGSC 354
>PUR6_RAT (P51583) Multifunctional protein ADE2 [Includes:| Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) (SAICAR synthetase); Phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21) (AIR carboxylase) (AIRC)] Length = 424 Score = 34.3 bits (77), Expect = 0.15 Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 9/76 (11%) Frame = -3 Query: 326 VTCPPNTTLWIASDGWCGRRLGGGVAPSTSSGCAPSGHASRSAV-------LVWDFLTGA 168 ++CPP T W A D W RL G+ ST +P G A +A LVW L + Sbjct: 347 ISCPPITADWGAQDVWSSLRLPSGIGCSTI--LSPEGSAQFAAQIFGLNNHLVWAKLRAS 404 Query: 167 GLS--ISSSSATAKAR 126 L+ IS A K R Sbjct: 405 KLNTWISLKQADKKIR 420
>TAF5_SCHPO (O13282) Transcription initiation factor TFIID subunit 5| (Transcription initiation factor TFIID 72 kDa subunit) (TAFII-72) Length = 643 Score = 33.9 bits (76), Expect = 0.20 Identities = 28/87 (32%), Positives = 33/87 (37%), Gaps = 10/87 (11%) Frame = -3 Query: 401 PLPVISFHLGAEHCFLL-----LRLSASSSVTCPPNTTLWIASDGWCGRRLGGGVAPSTS 237 PL V + HL C L+ SS TC LW G R G P T+ Sbjct: 455 PLRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTC----RLWDVHRGHSVRVFNGHTQPVTA 510 Query: 236 SGCAPSGHASRSA-----VLVWDFLTG 171 AP GH SA + +WD TG Sbjct: 511 VAIAPDGHTMASADSEGLIHLWDIGTG 537
>PUR6_MOUSE (Q9DCL9) Multifunctional protein ADE2 [Includes:| Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) (SAICAR synthetase); Phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21) (AIR carboxylase) (AIRC)] Length = 424 Score = 33.5 bits (75), Expect = 0.26 Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 9/76 (11%) Frame = -3 Query: 326 VTCPPNTTLWIASDGWCGRRLGGGVAPSTSSGCAPSGHASRSAV-------LVWDFLTGA 168 ++CPP T W A D W RL G+ ST +P G A +A LVW L + Sbjct: 347 ISCPPITPDWGAQDVWSSLRLPSGIGCSTI--LSPEGSAQFAAQIFGLNNHLVWAKLRAS 404 Query: 167 GLS--ISSSSATAKAR 126 L+ IS A K R Sbjct: 405 ILNTWISLKQADKKVR 420
>WNK4_HUMAN (Q96J92) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1)| (Protein kinase with no lysine 4) (Protein kinase, lysine-deficient 4) Length = 1243 Score = 33.1 bits (74), Expect = 0.34 Identities = 25/87 (28%), Positives = 40/87 (45%) Frame = +1 Query: 115 PGPGRAFAVAEEEEMERPAPVRKSHTNTADLLAWPEGAQPELVDGATPPPNRRPHQPSEA 294 PGP R+ + +E P + T A + A + A+PEL D A P +R P + EA Sbjct: 92 PGPARSPPPSSKE------PPEGTWTEGAPVKAAEDSARPELPDSAVGPGSREPLRVPEA 145 Query: 295 IHKVVFGGQVTEEEAESLNKRKQCSAP 375 V + +EE E + + ++P Sbjct: 146 ---VALERRREQEEKEDMETQAVATSP 169
>PUR6_PONPY (Q5RB59) Multifunctional protein ADE2 [Includes:| Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) (SAICAR synthetase); Phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21) (AIR carboxylase) (AIRC)] Length = 424 Score = 33.1 bits (74), Expect = 0.34 Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 9/76 (11%) Frame = -3 Query: 326 VTCPPNTTLWIASDGWCGRRLGGGVAPSTSSGCAPSGHASRSAV-------LVWDFLTGA 168 ++CPP T W A D W RL G+ ST +P G A +A LVW L + Sbjct: 347 ISCPPLTPDWGAQDVWSSLRLPSGLGCSTI--LSPEGSAQFAAQIFGLNNHLVWSKLRAS 404 Query: 167 GLS--ISSSSATAKAR 126 L+ IS A K R Sbjct: 405 ILNTWISLKQADKKIR 420
>UREA_ASPFU (Q6A3P9) Urease (EC 3.5.1.5) (Urea amidohydrolase)| Length = 838 Score = 32.0 bits (71), Expect = 0.76 Identities = 23/71 (32%), Positives = 27/71 (38%), Gaps = 9/71 (12%) Frame = -3 Query: 266 LGGGVAPSTSSG---CAPSGHASRSAVLVWDFL------TGAGLSISSSSATAKARPGPG 114 LGGG PST + C P R + D L TG G S + R G Sbjct: 428 LGGGTGPSTGTNATTCTPGPTLMRQMIQACDGLPINVGITGKGNDSGGKSIEEQIRAGAA 487 Query: 113 FLSLPARWGSS 81 L L WGS+ Sbjct: 488 GLKLHEDWGST 498
>UREA_SCHPO (O00084) Urease (EC 3.5.1.5) (Urea amidohydrolase)| Length = 835 Score = 31.6 bits (70), Expect = 0.99 Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 9/70 (12%) Frame = -3 Query: 263 GGGVAPSTSSG---CAPSGHASRSAVLVWDF------LTGAGLSISSSSATAKARPGPGF 111 GGG PST + C P+ RS + D LTG G SSS + G Sbjct: 426 GGGTGPSTGTNATTCTPNKDLIRSMLRSTDSYPMNIGLTGKGNDSGSSSLKEQIEAGCSG 485 Query: 110 LSLPARWGSS 81 L L WGS+ Sbjct: 486 LKLHEDWGST 495
>PUR6_HUMAN (P22234) Multifunctional protein ADE2 [Includes:| Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) (SAICAR synthetase); Phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21) (AIR carboxylase) (AIRC)] Length = 424 Score = 31.6 bits (70), Expect = 0.99 Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 9/76 (11%) Frame = -3 Query: 326 VTCPPNTTLWIASDGWCGRRLGGGVAPSTSSGCAPSGHASRSAV-------LVWDFLTGA 168 ++CPP T W D W RL G+ ST +P G A +A LVW L + Sbjct: 347 ISCPPLTPDWGVQDVWSSLRLPSGLGCSTV--LSPEGSAQFAAQIFGLSNHLVWSKLRAS 404 Query: 167 GLS--ISSSSATAKAR 126 L+ IS A K R Sbjct: 405 ILNTWISLKQADKKIR 420
>CDC20_YEAST (P26309) APC/C activator protein CDC20 (Cell division control| protein 20) Length = 610 Score = 31.2 bits (69), Expect = 1.3 Identities = 17/42 (40%), Positives = 20/42 (47%) Frame = +1 Query: 232 PELVDGATPPPNRRPHQPSEAIHKVVFGGQVTEEEAESLNKR 357 PE + A PPPN P A K+VF V E +NKR Sbjct: 160 PETLHEALPPPNASPISHLRAQTKIVFKQNVAEACGLDMNKR 201
>CTDP1_HUMAN (Q9Y5B0) RNA polymerase II subunit A C-terminal domain phosphatase| (EC 3.1.3.16) (TFIIF-associating CTD phosphatase) Length = 961 Score = 31.2 bits (69), Expect = 1.3 Identities = 22/87 (25%), Positives = 37/87 (42%) Frame = +1 Query: 94 RAGRERNPGPGRAFAVAEEEEMERPAPVRKSHTNTADLLAWPEGAQPELVDGATPPPNRR 273 R G P P + + +E R P + +L P+ DG P P+RR Sbjct: 783 RTGARGPPAPSSSLPIRQEPSSFRAVPPPQPQMFGEEL--------PDAQDGEQPGPSRR 834 Query: 274 PHQPSEAIHKVVFGGQVTEEEAESLNK 354 QPS + ++ + +E+ ES++K Sbjct: 835 KRQPSMSETMPLY--TLCKEDLESMDK 859
>K0256_MOUSE (Q6A098) Protein KIAA0256| Length = 1086 Score = 30.8 bits (68), Expect = 1.7 Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 1/74 (1%) Frame = +1 Query: 70 REKHELPHRAGRERNPGPGRAFAVAEE-EEMERPAPVRKSHTNTADLLAWPEGAQPELVD 246 R +PH G RNP A + E ++ TN ++ +G +P ++ Sbjct: 830 RSVKTVPHHMGHSRNPSAASAISFCSVISEPISEVNEKEYETNWRSMVETSDGLEPSEME 889 Query: 247 GATPPPNRRPHQPS 288 A P + P +PS Sbjct: 890 KAAPCTHSPPEKPS 903
>COBQ_STRCO (Q9RJ20) Cobyric acid synthase| Length = 502 Score = 30.4 bits (67), Expect = 2.2 Identities = 16/52 (30%), Positives = 25/52 (48%) Frame = +1 Query: 82 ELPHRAGRERNPGPGRAFAVAEEEEMERPAPVRKSHTNTADLLAWPEGAQPE 237 E+ AGR P P +FA EE+++R + + H +T L E P+ Sbjct: 440 EVAAAAGRRFVPAPDTSFAALREEQLDRLGDLIEHHADTDALWRLIESGAPQ 491
>INHBE_RAT (O88959) Inhibin beta E chain precursor (Activin beta-E chain)| Length = 350 Score = 30.4 bits (67), Expect = 2.2 Identities = 23/76 (30%), Positives = 26/76 (34%), Gaps = 6/76 (7%) Frame = +1 Query: 103 RERNPGPGRAFAVAEEEEMERPAPVRKSHTNTADLLAW------PEGAQPELVDGATPPP 264 R PG GRA E E P R+ H L W PEG Q G PP Sbjct: 224 RANEPGAGRARRRTPTCESETPLCCRRDHYVDFQELGWRDWILQPEGYQLNYCSGQCPPH 283 Query: 265 NRRPHQPSEAIHKVVF 312 + + H VF Sbjct: 284 LAGSPGIAASFHSAVF 299
>BUR1_YARLI (Q6C842) Serine/threonine-protein kinase BUR1 (EC 2.7.11.22) (EC| 2.7.11.23) Length = 706 Score = 30.4 bits (67), Expect = 2.2 Identities = 25/101 (24%), Positives = 38/101 (37%), Gaps = 4/101 (3%) Frame = +1 Query: 70 REKHELPHRAGRERNPGPGRAFAVAEEEEM----ERPAPVRKSHTNTADLLAWPEGAQPE 237 RE ELP + P P V ++ E ++P + P P Sbjct: 579 REPRELP------KGPPPAPGDKVEDKGESHNKDDKPCDTENPRDSDKSRDLGPPPGPPL 632 Query: 238 LVDGATPPPNRRPHQPSEAIHKVVFGGQVTEEEAESLNKRK 360 DG PPP+ P +PSE +GG +S ++R+ Sbjct: 633 PADGPPPPPSSNPPRPSE-----TYGGSRPPWRRDSRDRRE 668
>Y952_BRUME (Q8YH52) UPF0283 membrane protein BMEI0952| Length = 357 Score = 30.4 bits (67), Expect = 2.2 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 4/80 (5%) Frame = +1 Query: 88 PHRAGRERNPGPGRAFAVAEEEEMERPAPVR--KSHTNTADL--LAWPEGAQPELVDGAT 255 P + R P R A +E+EE RP V+ + T AD+ L E A+ E++D A Sbjct: 6 PRKPTAFRLEQPARVSAASEQEEPRRPRAVKDLEQITPQADVFDLTDDEAAELEILDPAF 65 Query: 256 PPPNRRPHQPSEAIHKVVFG 315 P R+ ++ +++FG Sbjct: 66 EAPERK----GWSLSRILFG 81
>Y1033_BRUSU (Q8G0Q5) UPF0283 membrane protein BR1033| Length = 357 Score = 30.4 bits (67), Expect = 2.2 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 4/80 (5%) Frame = +1 Query: 88 PHRAGRERNPGPGRAFAVAEEEEMERPAPVR--KSHTNTADL--LAWPEGAQPELVDGAT 255 P + R P R A +E+EE RP V+ + T AD+ L E A+ E++D A Sbjct: 6 PRKPTAFRLEQPARVSAASEQEEPRRPRAVKDLEQITPQADVFDLTDDEAAELEILDPAF 65 Query: 256 PPPNRRPHQPSEAIHKVVFG 315 P R+ ++ +++FG Sbjct: 66 EAPERK----GWSLSRILFG 81
>LCE1D_HUMAN (Q5T752) Late cornified envelope protein 1D (Late envelope protein| 4) Length = 114 Score = 30.4 bits (67), Expect = 2.2 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -3 Query: 320 CPP-NTTLWIASDGWCGRRLGGGVAPSTSSGCAPSG 216 CPP ++ ++S G CG GGG S S GC SG Sbjct: 33 CPPVSSCCSVSSGGCCGSSSGGGCG-SNSGGCCSSG 67
>NFAC2_HUMAN (Q13469) Nuclear factor of activated T-cells, cytoplasmic 2 (T cell| transcription factor NFAT1) (NFAT pre-existing subunit) (NF-ATp) Length = 925 Score = 30.4 bits (67), Expect = 2.2 Identities = 32/127 (25%), Positives = 46/127 (36%), Gaps = 6/127 (4%) Frame = +1 Query: 22 STPLSHPTLTLASPF*REKHE-LPHRAGRERNPGPGRAFAVAEEEEMERPAPVRKSHTNT 198 ++P+ P +LA +H +P A R +PG R + AE Sbjct: 216 TSPIMSPRTSLAEDSCLGRHSPVPRPASRSSSPGAKRRHSCAEA---------------- 259 Query: 199 ADLLAWPEGAQPELVDGATPPPNRR---PHQPSEAIHKVVFGGQVTEEEAESLNKRKQCS 369 L+A P GA P+ +P P+ S A + V G V + SL C Sbjct: 260 --LVALPPGASPQRSRSPSPQPSSHVAPQDHGSPAGYPPVAGSAVIMDALNSLATDSPCG 317 Query: 370 AP--KWK 384 P WK Sbjct: 318 IPPKMWK 324
>ATG13_EMENI (Q5BBK4) Autophagy-related protein 13| Length = 974 Score = 30.4 bits (67), Expect = 2.2 Identities = 20/63 (31%), Positives = 23/63 (36%), Gaps = 1/63 (1%) Frame = +1 Query: 91 HRAGRERNPGPGRAFAVAEEEEMERPAPVRKSHTNT-ADLLAWPEGAQPELVDGATPPPN 267 H G P A A E P+P SH N+ A A P G L + P Sbjct: 374 HHVGPTTGASPISALRAAREARASSPSPPTSSHRNSFAAARASPVGRAATLANDTNPNVA 433 Query: 268 RRP 276 RRP Sbjct: 434 RRP 436
>SASH1_HUMAN (O94885) SAM and SH3 domain-containing protein 1 (Proline-glutamate| repeat-containing protein) Length = 1247 Score = 30.4 bits (67), Expect = 2.2 Identities = 12/18 (66%), Positives = 13/18 (72%) Frame = -3 Query: 269 RLGGGVAPSTSSGCAPSG 216 RLGGG+AP TS C P G Sbjct: 786 RLGGGLAPDTSKSCDPPG 803
>LCE1E_HUMAN (Q5T753) Late cornified envelope protein 1E (Late envelope protein| 5) Length = 118 Score = 30.4 bits (67), Expect = 2.2 Identities = 14/35 (40%), Positives = 17/35 (48%) Frame = -3 Query: 320 CPPNTTLWIASDGWCGRRLGGGVAPSTSSGCAPSG 216 CPP ++ S G C GG S+S GC SG Sbjct: 37 CPPVSSCCSVSSGGCCGSSSGGSCGSSSGGCCSSG 71
>LCE1C_HUMAN (Q5T751) Late cornified envelope protein 1C (Late envelope protein| 3) Length = 118 Score = 30.4 bits (67), Expect = 2.2 Identities = 14/35 (40%), Positives = 17/35 (48%) Frame = -3 Query: 320 CPPNTTLWIASDGWCGRRLGGGVAPSTSSGCAPSG 216 CPP ++ S G C GG S+S GC SG Sbjct: 37 CPPVSSCCSVSSGGCCGSSSGGSCGSSSGGCCSSG 71
>LCE1B_HUMAN (Q5T7P3) Late cornified envelope protein 1B (Late envelope protein| 2) (Small proline-rich-like epidermal differentiation complex protein 2A) Length = 118 Score = 30.4 bits (67), Expect = 2.2 Identities = 14/35 (40%), Positives = 17/35 (48%) Frame = -3 Query: 320 CPPNTTLWIASDGWCGRRLGGGVAPSTSSGCAPSG 216 CPP ++ S G C GG S+S GC SG Sbjct: 37 CPPVSSCCSVSSGGCCGSSSGGSCGSSSGGCCSSG 71
>LZTS2_MOUSE (Q91YU6) Leucine zipper putative tumor suppressor 2| Length = 671 Score = 30.0 bits (66), Expect = 2.9 Identities = 35/121 (28%), Positives = 45/121 (37%), Gaps = 7/121 (5%) Frame = +1 Query: 1 LTFLPFDSTPLSHPTLTLASPF*REKHELPHRAGRERNPGPGRAFAVAEEEEMERPAPVR 180 L+ LP ST + PT SP H H GR PGP R + Sbjct: 225 LSSLPTYSTGGAEPTTN--SP---GGHLPSHGPGRGALPGPARGVPTGPSHSDSGRSSSS 279 Query: 181 KSHTN-----TADLLAWPEGAQPELVDGA--TPPPNRRPHQPSEAIHKVVFGGQVTEEEA 339 KS + LL A P G +PPP P EA+ + V G++ + EA Sbjct: 280 KSTGSLGGRVAGGLLGSGARASPGSSSGGDRSPPPPPPPPPSDEALLQCVLEGKLRDREA 339 Query: 340 E 342 E Sbjct: 340 E 340
>INHBE_MOUSE (O08717) Inhibin beta E chain precursor (Activin beta-E chain)| Length = 350 Score = 30.0 bits (66), Expect = 2.9 Identities = 23/76 (30%), Positives = 26/76 (34%), Gaps = 6/76 (7%) Frame = +1 Query: 103 RERNPGPGRAFAVAEEEEMERPAPVRKSHTNTADLLAW------PEGAQPELVDGATPPP 264 R PG GRA E E P R+ H L W PEG Q G PP Sbjct: 224 RANEPGAGRARRRTPTCEPETPLCCRRDHYVDFQELGWRDWILQPEGYQLNYCSGQCPPH 283 Query: 265 NRRPHQPSEAIHKVVF 312 + + H VF Sbjct: 284 LAGSPGIAASFHSAVF 299
>PUR6_CHICK (P38024) Multifunctional protein ADE2 [Includes:| Phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6) (SAICAR synthetase); Phosphoribosylaminoimidazole carboxylase (EC 4.1.1.21) (AIR carboxylase) (AIRC)] Length = 426 Score = 29.6 bits (65), Expect = 3.8 Identities = 26/76 (34%), Positives = 33/76 (43%), Gaps = 9/76 (11%) Frame = -3 Query: 326 VTCPPNTTLWIASDGWCGRRLGGGVAPSTSSGCAPSGHASRSAV-------LVWDFLTGA 168 V CPP ++ W A D W RL G+ T+ +P G A +A LVW L Sbjct: 349 VNCPPLSSDWGAQDVWSSLRLPSGLGCPTT--LSPEGAAQFAAQIFGLNNHLVWAKLRSN 406 Query: 167 GLS--ISSSSATAKAR 126 L+ IS A K R Sbjct: 407 MLNTWISLKQADKKLR 422
>IRS1_MOUSE (P35569) Insulin receptor substrate 1 (IRS-1)| Length = 1233 Score = 29.6 bits (65), Expect = 3.8 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = -3 Query: 314 PNTTLWIASDGWCGRRLGGGVAPSTSSGCAPSG 216 PN + ++ G C +GGG + S+S APSG Sbjct: 655 PNGYMMMSPSGSCSPDIGGGSSSSSSISAAPSG 687
>MYRIP_HUMAN (Q8NFW9) Rab effector MyRIP (Myosin-VIIa- and Rab-interacting| protein) (Exophilin-8) (Slp homolog lacking C2 domains c) Length = 859 Score = 29.6 bits (65), Expect = 3.8 Identities = 22/68 (32%), Positives = 31/68 (45%) Frame = +1 Query: 82 ELPHRAGRERNPGPGRAFAVAEEEEMERPAPVRKSHTNTADLLAWPEGAQPELVDGATPP 261 E P R R++ P A+ + ++R TN A +L P+G L DGA PP Sbjct: 311 EAPSRQPRDQGQHPRAESALPSWKSVDR-----LDETNLAPVLQSPDGNWVALKDGA-PP 364 Query: 262 PNRRPHQP 285 P R +P Sbjct: 365 PTRLLAKP 372
>SGOL2_MOUSE (Q7TSY8) Shugoshin-like 2| Length = 1164 Score = 29.6 bits (65), Expect = 3.8 Identities = 33/120 (27%), Positives = 44/120 (36%), Gaps = 3/120 (2%) Frame = +1 Query: 10 LPFDSTPLSHPTLTLASPF*REKHELPHRAGRERNPGPGRAFAVAEEEEMERPAPVRKSH 189 +P DS HP + P E+ LP + G AF+V+ +E RPA Sbjct: 916 VPLDSGLRHHPNEADSGP--GEQTNLPKMQKQSAGRSLGDAFSVSLGKEGSRPAKAVSKM 973 Query: 190 TNTADLLAWPEGAQPELVDGATPPPNRRPHQPSEAIHKVVFGGQVTEE---EAESLNKRK 360 T + P G PE PN + K V Q +E E E + KRK Sbjct: 974 TPKSKKRKLPLGCSPETHGTVEITPN-------TDLAKAVDSQQTEKENYLEKEKIAKRK 1026
>UBQL3_HUMAN (Q9H347) Ubiquilin-3| Length = 655 Score = 29.3 bits (64), Expect = 4.9 Identities = 17/66 (25%), Positives = 27/66 (40%) Frame = +1 Query: 175 VRKSHTNTADLLAWPEGAQPELVDGATPPPNRRPHQPSEAIHKVVFGGQVTEEEAESLNK 354 +++ H N L + +G L PPP+ PS + GQ EE+ ++ Sbjct: 346 LQQLHENPQSLGTYLQGTASALSQSQEPPPSVNRVPPSSPSSQEPGSGQPLPEESVAIKG 405 Query: 355 RKQCSA 372 R C A Sbjct: 406 RSSCPA 411
>COCE_RHOSM (Q9L9D7) Cocaine esterase (EC 3.1.1.-)| Length = 574 Score = 29.3 bits (64), Expect = 4.9 Identities = 25/86 (29%), Positives = 30/86 (34%), Gaps = 29/86 (33%) Frame = -3 Query: 311 NTTLWIASDGWCGRRLG-------------------GG---VAPSTSSG-------CAPS 219 +T WI WC +G GG +APS +S P Sbjct: 96 DTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLYRAPWYGPG 155 Query: 218 GHASRSAVLVWDFLTGAGLSISSSSA 141 G S A+L W L G GL S S A Sbjct: 156 GALSVEALLGWSALIGTGLITSRSDA 181
>PHLPP_HUMAN (O60346) PH domain leucine-rich repeat-containing protein| phosphatase (EC 3.1.3.16) (PH domain leucine-rich repeat protein phosphatase) (Pleckstrin homology domain-containing family E protein 1) (Suprachiasmatic nucleus circadian oscillatory Length = 1717 Score = 29.3 bits (64), Expect = 4.9 Identities = 26/77 (33%), Positives = 32/77 (41%), Gaps = 9/77 (11%) Frame = -3 Query: 284 GWCGRRLGGGVAPSTSSGCAP---SGHASRSAVLVWDFL------TGAGLSISSSSATAK 132 G GRR G + G AP +G + S +L L A S SSSS+ A Sbjct: 88 GGAGRRRRRGAPQPIAGGAAPVPGAGGGANSLLLRRGRLKRNLSAAAAAASSSSSSSAAA 147 Query: 131 ARPGPGFLSLPARWGSS 81 A PG LPA +S Sbjct: 148 ASHSPGAAGLPASCSAS 164
>IRS1_RAT (P35570) Insulin receptor substrate 1 (IRS-1) (pp185)| Length = 1235 Score = 29.3 bits (64), Expect = 4.9 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -3 Query: 314 PNTTLWIASDGWCGRRLGGGVAPSTSSGCAPSG 216 PN + ++ G C +GGG S+S APSG Sbjct: 655 PNGYMMMSPSGSCSPDIGGGSCSSSSISAAPSG 687
>TMEPA_HUMAN (Q969W9) Transmembrane prostate androgen-induced protein (Solid| tumor-associated 1 protein) Length = 287 Score = 29.3 bits (64), Expect = 4.9 Identities = 17/41 (41%), Positives = 24/41 (58%) Frame = -3 Query: 329 SVTCPPNTTLWIASDGWCGRRLGGGVAPSTSSGCAPSGHAS 207 SV PPN T++ SD RLGG PS++SG + + + S Sbjct: 182 SVRAPPNRTIF-DSDLMDSARLGGPCPPSSNSGISATCYGS 221
>KIF1C_RAT (O35787) Kinesin-like protein KIF1C (Kinesin-like protein KIF1D)| Length = 1097 Score = 28.9 bits (63), Expect = 6.4 Identities = 21/64 (32%), Positives = 26/64 (40%), Gaps = 10/64 (15%) Frame = +1 Query: 217 PEGAQPELVDGATPPPNRRPHQPSEAIHKV----------VFGGQVTEEEAESLNKRKQC 366 P PE V PPPNRRP P H+ GG T+ E + L +K Sbjct: 996 PGPQPPEEVTAPPPPPNRRPPSPRRP-HRPRRNSLDGGSRSRGGGSTQPEPQHLRPQKHN 1054 Query: 367 SAPK 378 S P+ Sbjct: 1055 SYPQ 1058
>V70K_TYMV (P10357) 69 kDa protein| Length = 628 Score = 28.9 bits (63), Expect = 6.4 Identities = 22/78 (28%), Positives = 31/78 (39%), Gaps = 11/78 (14%) Frame = +1 Query: 76 KHELPHRAGRERNPGPGRAFAVAEEEEMERPAPVRKSHTNTADLLAW-----------PE 222 K LP + R P P +A RP P+ + +A+ P+ Sbjct: 368 KRRLPRSSEPNRLPKPLPEATLAPSYRHRRPYPLLPNPPAALPSIAYTSSRGKIHHSLPK 427 Query: 223 GAQPELVDGATPPPNRRP 276 GA P+ +GA PPP R P Sbjct: 428 GALPK--EGAPPPPRRLP 443
>CT012_HUMAN (Q9NVP4) Protein C20orf12| Length = 579 Score = 28.9 bits (63), Expect = 6.4 Identities = 24/73 (32%), Positives = 29/73 (39%), Gaps = 5/73 (6%) Frame = -3 Query: 302 LWIASD-GWCGRRLGGGVAPSTSSGCAPSGHASR----SAVLVWDFLTGAGLSISSSSAT 138 LW AS GWCG LG S C S H S S + L L S + A Sbjct: 174 LWEASFCGWCGAMLGIPAGCSVCPKCGASNHLSARFCGSCGICVKSLVKLSLDRSLALAA 233 Query: 137 AKARPGPGFLSLP 99 + RP L++P Sbjct: 234 EEPRPFSESLNIP 246
>CMGA_HUMAN (P10645) Chromogranin A precursor (CgA) (Pituitary secretory| protein I) (SP-I) [Contains: Vasostatin-1 (Vasostatin I); Vasostatin-2 (Vasostatin II); EA-92; ES-43; Pancreastatin; SS-18; WA-8; WE-14; LF-19; AL-11; GV-19; GR-44; ER-37] Length = 457 Score = 28.9 bits (63), Expect = 6.4 Identities = 18/50 (36%), Positives = 21/50 (42%) Frame = +1 Query: 235 ELVDGATPPPNRRPHQPSEAIHKVVFGGQVTEEEAESLNKRKQCSAPKWK 384 E DGA P P Q S+A G+ EEE E+ N S P K Sbjct: 144 EATDGARPQALPEPMQESKAEGNNQAPGEEEEEEEEATNTHPPASLPSQK 193
>RS5_LEIXX (Q6AD11) 30S ribosomal protein S5| Length = 232 Score = 28.5 bits (62), Expect = 8.4 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Frame = +1 Query: 25 TPLSHPTLTLASPF*REKHELPHRAGRERNPGPGRAFAVAEEEE-MERPAPVRK 183 T + P T AS + P R GRERNP R A++ + +ER + + Sbjct: 6 TETAQPVETAASTDNNREQREPRRGGRERNPNRDRGNRDADKSQFLERVVTINR 59
>COBQ_STRAW (Q829J5) Cobyric acid synthase| Length = 502 Score = 28.5 bits (62), Expect = 8.4 Identities = 16/51 (31%), Positives = 24/51 (47%) Frame = +1 Query: 82 ELPHRAGRERNPGPGRAFAVAEEEEMERPAPVRKSHTNTADLLAWPEGAQP 234 E+ AGR P G +FA EE+++R + + H +T L E P Sbjct: 440 EVAAAAGRRFVPAAGTSFAGLREEQLDRLGDLIEEHADTDALWRLIESGAP 490
>NCOR2_MOUSE (Q9WU42) Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator| of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor-associating factor) (TRAC) Length = 2472 Score = 28.5 bits (62), Expect = 8.4 Identities = 22/98 (22%), Positives = 36/98 (36%), Gaps = 6/98 (6%) Frame = +1 Query: 88 PHRAGRERNPGPGRAFAVAEEEEMERPAPVRKSHT------NTADLLAWPEGAQPELVDG 249 PH G +R+P P + + E+ P + T +TA L + +G Q E Sbjct: 2153 PHSEGGKRSPEPSKTSVLGSSEDAIEPVSPPEGMTEPGHARSTAYPLLYRDGEQGE---- 2208 Query: 250 ATPPPNRRPHQPSEAIHKVVFGGQVTEEEAESLNKRKQ 363 P P F ++TE + + +KQ Sbjct: 2209 ----PRMGLESPGNTSQPPTFFSKLTESNSAMVKSKKQ 2242
>LCE1F_HUMAN (Q5T754) Late cornified envelope protein 1F (Late envelope protein| 6) Length = 118 Score = 28.5 bits (62), Expect = 8.4 Identities = 13/35 (37%), Positives = 15/35 (42%) Frame = -3 Query: 320 CPPNTTLWIASDGWCGRRLGGGVAPSTSSGCAPSG 216 CPP ++ S G C GG S GC SG Sbjct: 37 CPPVSSCCSVSSGGCCGSSSGGCCSSGGGGCCSSG 71 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.316 0.133 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,135,698 Number of Sequences: 219361 Number of extensions: 1028468 Number of successful extensions: 4812 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 4535 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4796 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
