| Clone Name | bast75g12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473091.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1680 Score = 305 bits (154), Expect = 3e-80 Identities = 190/202 (94%) Strand = Plus / Plus Query: 1 tgtaccgcgtgcccaagtccctccgcgagggcgacgagcgcgcctacatgccgcaggtgg 60 ||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| Sbjct: 347 tgtaccgcgtgcccaagtcgctccgcgacggcgacgagcgcgcgtacatgccgcaggtgg 406 Query: 61 tgtccatcggcccgctccacgccggcaagcggcggctgcgtgagatggagcggcacaagt 120 |||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||| Sbjct: 407 tgtccatcggcccgctccaccgcggccggcggcggctgcgggagatggagcggcacaagt 466 Query: 121 ggcgcgcgctgcaccacgtgctgaagcgcacgggccacgacgtcaccgcctacctcgacg 180 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 467 ggcgcgcgctgcaccacgtcctgaagcgcacggggcacgacgtcaccgcctacctcgacg 526 Query: 181 ccctgcggcccatggaggagcg 202 | |||||||| ||||||||||| Sbjct: 527 cgctgcggccgatggaggagcg 548
>emb|AL731638.3|OSJN00283 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0116K07, complete sequence Length = 130779 Score = 305 bits (154), Expect = 3e-80 Identities = 190/202 (94%) Strand = Plus / Minus Query: 1 tgtaccgcgtgcccaagtccctccgcgagggcgacgagcgcgcctacatgccgcaggtgg 60 ||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| Sbjct: 90950 tgtaccgcgtgcccaagtcgctccgcgacggcgacgagcgcgcgtacatgccgcaggtgg 90891 Query: 61 tgtccatcggcccgctccacgccggcaagcggcggctgcgtgagatggagcggcacaagt 120 |||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||| Sbjct: 90890 tgtccatcggcccgctccaccgcggccggcggcggctgcgggagatggagcggcacaagt 90831 Query: 121 ggcgcgcgctgcaccacgtgctgaagcgcacgggccacgacgtcaccgcctacctcgacg 180 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 90830 ggcgcgcgctgcaccacgtcctgaagcgcacggggcacgacgtcaccgcctacctcgacg 90771 Query: 181 ccctgcggcccatggaggagcg 202 | |||||||| ||||||||||| Sbjct: 90770 cgctgcggccgatggaggagcg 90749
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 305 bits (154), Expect = 3e-80 Identities = 190/202 (94%) Strand = Plus / Minus Query: 1 tgtaccgcgtgcccaagtccctccgcgagggcgacgagcgcgcctacatgccgcaggtgg 60 ||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| Sbjct: 25209283 tgtaccgcgtgcccaagtcgctccgcgacggcgacgagcgcgcgtacatgccgcaggtgg 25209224 Query: 61 tgtccatcggcccgctccacgccggcaagcggcggctgcgtgagatggagcggcacaagt 120 |||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||| Sbjct: 25209223 tgtccatcggcccgctccaccgcggccggcggcggctgcgggagatggagcggcacaagt 25209164 Query: 121 ggcgcgcgctgcaccacgtgctgaagcgcacgggccacgacgtcaccgcctacctcgacg 180 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 25209163 ggcgcgcgctgcaccacgtcctgaagcgcacggggcacgacgtcaccgcctacctcgacg 25209104 Query: 181 ccctgcggcccatggaggagcg 202 | |||||||| ||||||||||| Sbjct: 25209103 cgctgcggccgatggaggagcg 25209082
>dbj|AK121493.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033000K17, full insert sequence Length = 1865 Score = 305 bits (154), Expect = 3e-80 Identities = 190/202 (94%) Strand = Plus / Minus Query: 1 tgtaccgcgtgcccaagtccctccgcgagggcgacgagcgcgcctacatgccgcaggtgg 60 ||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| Sbjct: 1237 tgtaccgcgtgcccaagtcgctccgcgacggcgacgagcgcgcgtacatgccgcaggtgg 1178 Query: 61 tgtccatcggcccgctccacgccggcaagcggcggctgcgtgagatggagcggcacaagt 120 |||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||| Sbjct: 1177 tgtccatcggcccgctccaccgcggccggcggcggctgcgggagatggagcggcacaagt 1118 Query: 121 ggcgcgcgctgcaccacgtgctgaagcgcacgggccacgacgtcaccgcctacctcgacg 180 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 1117 ggcgcgcgctgcaccacgtcctgaagcgcacggggcacgacgtcaccgcctacctcgacg 1058 Query: 181 ccctgcggcccatggaggagcg 202 | |||||||| ||||||||||| Sbjct: 1057 cgctgcggccgatggaggagcg 1036
>dbj|AK063930.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-D02, full insert sequence Length = 2109 Score = 305 bits (154), Expect = 3e-80 Identities = 190/202 (94%) Strand = Plus / Plus Query: 1 tgtaccgcgtgcccaagtccctccgcgagggcgacgagcgcgcctacatgccgcaggtgg 60 ||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| Sbjct: 491 tgtaccgcgtgcccaagtcgctccgcgacggcgacgagcgcgcgtacatgccgcaggtgg 550 Query: 61 tgtccatcggcccgctccacgccggcaagcggcggctgcgtgagatggagcggcacaagt 120 |||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||| Sbjct: 551 tgtccatcggcccgctccaccgcggccggcggcggctgcgggagatggagcggcacaagt 610 Query: 121 ggcgcgcgctgcaccacgtgctgaagcgcacgggccacgacgtcaccgcctacctcgacg 180 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 611 ggcgcgcgctgcaccacgtcctgaagcgcacggggcacgacgtcaccgcctacctcgacg 670 Query: 181 ccctgcggcccatggaggagcg 202 | |||||||| ||||||||||| Sbjct: 671 cgctgcggccgatggaggagcg 692
>dbj|AK063370.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-E02, full insert sequence Length = 2062 Score = 305 bits (154), Expect = 3e-80 Identities = 190/202 (94%) Strand = Plus / Minus Query: 1 tgtaccgcgtgcccaagtccctccgcgagggcgacgagcgcgcctacatgccgcaggtgg 60 ||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||| Sbjct: 1441 tgtaccgcgtgcccaagtcgctccgcgacggcgacgagcgcgcgtacatgccgcaggtgg 1382 Query: 61 tgtccatcggcccgctccacgccggcaagcggcggctgcgtgagatggagcggcacaagt 120 |||||||||||||||||||| |||| |||||||||||| ||||||||||||||||||| Sbjct: 1381 tgtccatcggcccgctccaccgcggccggcggcggctgcgggagatggagcggcacaagt 1322 Query: 121 ggcgcgcgctgcaccacgtgctgaagcgcacgggccacgacgtcaccgcctacctcgacg 180 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct: 1321 ggcgcgcgctgcaccacgtcctgaagcgcacggggcacgacgtcaccgcctacctcgacg 1262 Query: 181 ccctgcggcccatggaggagcg 202 | |||||||| ||||||||||| Sbjct: 1261 cgctgcggccgatggaggagcg 1240
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.046 Identities = 32/35 (91%) Strand = Plus / Minus Query: 39 cgcgcctacatgccgcaggtggtgtccatcggccc 73 ||||||||| |||||||||||||||| ||||||| Sbjct: 17723388 cgcgcctaccagccgcaggtggtgtccctcggccc 17723354
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.046 Identities = 32/35 (91%) Strand = Plus / Minus Query: 39 cgcgcctacatgccgcaggtggtgtccatcggccc 73 ||||||||| |||||||||||||||| ||||||| Sbjct: 17677759 cgcgcctaccagccgcaggtggtgtccctcggccc 17677725
>emb|AL713909.5|CNS07YQ9 Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0073H17 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 113494 Score = 46.1 bits (23), Expect = 0.046 Identities = 32/35 (91%) Strand = Plus / Plus Query: 39 cgcgcctacatgccgcaggtggtgtccatcggccc 73 ||||||||| |||||||||||||||| ||||||| Sbjct: 57965 cgcgcctaccagccgcaggtggtgtccctcggccc 57999
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 44.1 bits (22), Expect = 0.18 Identities = 22/22 (100%) Strand = Plus / Plus Query: 47 catgccgcaggtggtgtccatc 68 |||||||||||||||||||||| Sbjct: 3916661 catgccgcaggtggtgtccatc 3916682
>ref|XM_308179.2| Anopheles gambiae str. PEST ENSANGP00000020725 (ENSANGG00000018236), partial mRNA Length = 1168 Score = 42.1 bits (21), Expect = 0.72 Identities = 24/25 (96%) Strand = Plus / Plus Query: 136 acgtgctgaagcgcacgggccacga 160 ||||||||||||||| ||||||||| Sbjct: 897 acgtgctgaagcgcatgggccacga 921
>ref|XM_464868.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2133 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 50 gccgcaggtggtgtccatcggccc 73 ||||||| |||||||||||||||| Sbjct: 147 gccgcagctggtgtccatcggccc 170
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 ggcgacgagcgcgcctacat 49 |||||||||||||||||||| Sbjct: 2375781 ggcgacgagcgcgcctacat 2375800
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 cgctccacgccggcaagcgg 92 |||||||||||||||||||| Sbjct: 2677390 cgctccacgccggcaagcgg 2677409
>ref|NM_000498.2| Homo sapiens cytochrome P450, family 11, subfamily B, polypeptide 2 (CYP11B2), nuclear gene encoding mitochondrial protein, mRNA Length = 2936 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gctgcaccacgtgctgaagc 147 |||||||||||||||||||| Sbjct: 1392 gctgcaccacgtgctgaagc 1411
>emb|X54741.1|HSP450AL Human CYPXIB2 gene for aldosterone synthase Length = 2936 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 128 gctgcaccacgtgctgaagc 147 |||||||||||||||||||| Sbjct: 1392 gctgcaccacgtgctgaagc 1411
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 cgctccacgccggcaagcgg 92 |||||||||||||||||||| Sbjct: 718283 cgctccacgccggcaagcgg 718264
>emb|BX640439.1| Bordetella bronchiseptica strain RB50, complete genome; segment 3/16 Length = 346362 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 gcgagggcgacgagcgcgcc 44 |||||||||||||||||||| Sbjct: 239747 gcgagggcgacgagcgcgcc 239766
>emb|BX640425.1| Bordetella parapertussis strain 12822, complete genome; segment 3/14 Length = 348257 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 gcgagggcgacgagcgcgcc 44 |||||||||||||||||||| Sbjct: 153667 gcgagggcgacgagcgcgcc 153686
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 gccgcaggtggtgtccatcggccc 73 ||||||| |||||||||||||||| Sbjct: 8643803 gccgcagctggtgtccatcggccc 8643780
>dbj|AK189961.1| Mus musculus cDNA, clone:Y1G0101F03, strand:unspecified Length = 246 Score = 40.1 bits (20), Expect = 2.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 189 cccatggaggagcgtgtgag 208 |||||||||||||||||||| Sbjct: 215 cccatggaggagcgtgtgag 196
>dbj|AP005510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0009N02 Length = 121142 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 gccgcaggtggtgtccatcggccc 73 ||||||| |||||||||||||||| Sbjct: 113126 gccgcagctggtgtccatcggccc 113103
>dbj|AP004875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0463G12 Length = 145403 Score = 40.1 bits (20), Expect = 2.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 50 gccgcaggtggtgtccatcggccc 73 ||||||| |||||||||||||||| Sbjct: 50850 gccgcagctggtgtccatcggccc 50827 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 954,704 Number of Sequences: 3902068 Number of extensions: 954704 Number of successful extensions: 75720 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74918 Number of HSP's gapped (non-prelim): 802 length of query: 222 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 200 effective length of database: 17,147,199,772 effective search space: 3429439954400 effective search space used: 3429439954400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)