Clone Information

BLAST Search Result

Clone Name	bast75g03
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ML423_ARATH (Q93VR4) MLP-like protein 423	100	3e-21
2	ML146_PAPSO (Q06394) Major latex protein 146 (MLP 146)	58	1e-08
3	MLP43_ARATH (Q9SSK5) MLP-like protein 43	55	1e-07
4	MLP28_ARATH (Q9SSK9) MLP-like protein 28	55	1e-07
5	MLP34_ARATH (Q9SSK7) MLP-like protein 34	52	1e-06
6	MLP31_ARATH (Q941R6) MLP-like protein 31	51	1e-06
7	MLP22_PAPSO (Q41020) Major latex protein 22 (MLP 22) (gMLP22)	50	4e-06
8	RAP_TAROF (O49065) Root allergen protein (RAP)	47	2e-05
9	PR13_PETCR (P19418) Pathogenesis-related protein B (PR1-3)	46	6e-05
10	ML149_PAPSO (Q06395) Major latex protein 149 (MLP 149)	45	1e-04
11	ML168_ARATH (Q9C7I3) MLP-like protein 168	44	2e-04
12	RNS1_PANGI (P80889) Ribonuclease 1 (EC 3.1.-.-)	43	4e-04
13	BEV1E_BETVE (P43178) Major pollen allergen Bet v 1-E (Bet v I-E)	43	5e-04
14	PR2_PETCR (P27538) Pathogenesis-related protein 2	42	6e-04
15	BEV1J_BETVE (P43183) Major pollen allergen Bet v 1-J (Bet v I-J)	41	0.001
16	BEV1F_BETVE (P43179) Major pollen allergen Bet v 1-F/I (Bet v I-...	41	0.001
17	MPAC2_CARBE (P38950) Major pollen allergen Car b 1 isoform 2 (Ca...	41	0.002
18	ALL2_APIGR (P92918) Major allergen Api g 2 (Api g 1.0201)	40	0.002
19	BEV1A_BETVE (P15494) Major pollen allergen Bet v 1-A (Bet v I-A)	40	0.003
20	BEV1G_BETVE (P43180) Major pollen allergen Bet v 1-G (Bet v I-G)	39	0.007
21	RNS2_PANGI (P80890) Ribonuclease 2 (EC 3.1.-.-)	39	0.009
22	MPAG1_ALNGL (P38948) Major pollen allergen Aln g 1 (Aln g I)	38	0.012
23	MPAC1_CARBE (P38949) Major pollen allergen Car b 1 isoforms 1A a...	38	0.012
24	PR1_PHAVU (P25985) Pathogenesis-related protein 1 (PvPR1) (PR2)	38	0.016
25	BEV1K_BETVE (P43184) Major pollen allergen Bet v 1-K (Bet v I-K)	38	0.016
26	BEV1C_BETVE (P43176) Major pollen allergen Bet v 1-C (Bet v I-C)	38	0.016
27	BEV1B_BETVE (P45431) Major pollen allergen Bet v 1-B (Bet v I-B)	38	0.016
28	BEV1D_BETVE (P43177) Major pollen allergen Bet v 1-D/H (Bet v I-...	37	0.021
29	BEV1M_BETVE (P43186) Major pollen allergen Bet v 1-M/N (Bet v I-...	37	0.027
30	BEV1L_BETVE (P43185) Major pollen allergen Bet v 1-L (Bet v I-L)	37	0.027
31	PRU1_PRUAR (O50001) Major allergen Pru ar 1	36	0.060
32	MPAC1_CORAV (Q08407) Major pollen allergen Cor a 1 isoforms 5, 6...	35	0.078
33	MAL12_MALDO (Q40280) Major allergen Mal d 1 (Mal d I) (AP15)	33	0.39
34	PRU1_PRUAV (O24248) Major allergen Pru av 1 (Pru a 1)	32	0.66
35	MAL11_MALDO (P43211) Major allergen Mal d 1 (Mal d I)	32	0.87
36	O56A4_HUMAN (Q8NGH8) Olfactory receptor 56A4	31	1.5
37	THA_NECMA (O57606) Thyroid hormone receptor alpha	31	1.5
38	PYRC1_PYRCO (O65200) Major allergen Pyr c 1	31	1.5
39	L18B_LUPLU (P52779) Protein LlR18B (LlPR10.1B)	30	2.5
40	DRR3_PEA (P14710) Disease resistance response protein Pi49 (PR10)	30	4.3
41	ML328_ARATH (Q9ZVF3) MLP-like protein 328	30	4.3
42	L18A_LUPLU (P52778) Protein LlR18A (LlPR10.1A)	29	5.6
43	O56A1_HUMAN (Q8NGH5) Olfactory receptor 56A1	29	5.6
44	SHH_XENLA (Q92000) Sonic hedgehog protein precursor (X-SHH) (VHH...	29	5.6
45	ML329_ARATH (Q9ZVF2) MLP-like protein 329	29	5.6
46	DRR1_PEA (P13239) Disease resistance response protein Pi176	29	5.6
47	SEC65_KLULA (O13475) Signal recognition particle SEC65 subunit	29	7.3
48	SC6A6_RAT (P31643) Sodium- and chloride-dependent taurine transp...	29	7.3
49	TNFA_MACEU (O77764) Tumor necrosis factor precursor (TNF-alpha) ...	28	9.6
50	RIMM_BRUSU (P66652) Probable 16S rRNA-processing protein rimM	28	9.6
51	RIMM_BRUME (P66651) Probable 16S rRNA-processing protein rimM	28	9.6
52	TRUB_RHORT (Q2RMR8) tRNA pseudouridine synthase B (EC 5.4.99.-) ...	28	9.6

>ML423_ARATH (Q93VR4) MLP-like protein 423|
          Length = 155

 Score =  100 bits (248), Expect = 3e-21
 Identities = 47/127 (37%), Positives = 76/127 (59%)
 Frame = +2

Query: 89  MASKVELVVEVKSPADKLWTGMRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTE 268
           ++  + + VEVKSPA+K W  + +   LFPK FP  YK+I+ + GDG + G++RLI Y E
Sbjct: 3   LSGVLHVEVEVKSPAEKFWVALGDGINLFPKAFPNDYKTIQVLAGDGNAPGSIRLITYGE 62

Query: 269 GVPMVTFXXXXXXXXXXXXXLVSYSVVDGELVSFYKNFRVTVQVTDKGSADGVGAVVNWT 448
           G P+V                +SYS++ GE++ +YK F+ T+ V  K   DG G+++ W+
Sbjct: 63  GSPLVKISAERIEAVDLENKSMSYSIIGGEMLEYYKTFKGTITVIPK---DG-GSLLKWS 118

Query: 449 MDFDRPA 469
            +F++ A
Sbjct: 119 GEFEKTA 125

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>ML146_PAPSO (Q06394) Major latex protein 146 (MLP 146)|
          Length = 159

 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
 Frame = +2

Query: 62  IATLHPRRSMASKVELVVEVKSPADKLWTGMRESTELFPKIFPEQYKSIETVEGDGKSAG 241
           +A  H    +  K+ +  EV   ADK +   +   +L P + P  Y S++ VEG G ++G
Sbjct: 1   MAHTHCISGLVGKLVMESEVNCNADKYYKLYKHHEDL-PSVIPHIYTSVKAVEGHGTTSG 59

Query: 242 TVRLIKYT-EGVPMVTFXXXXXXXXXXXXXLVSYSVVDGELVSFYKNFRVTVQVTDKGSA 418
            V+   Y  EG P+                 + + VV G+L++ YK F  T+ V  K  +
Sbjct: 60  CVKEWGYILEGKPL---SCKEKTTYNDETRTIHHMVVAGDLMNDYKKFDATLVVNPK--S 114

Query: 419 DGVGAVVNWTMDFDR 463
           +G G +V WT+D+++
Sbjct: 115 NGHGCIVKWTIDYEK 129

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>MLP43_ARATH (Q9SSK5) MLP-like protein 43|
          Length = 158

 Score = 55.1 bits (131), Expect = 1e-07
 Identities = 33/126 (26%), Positives = 61/126 (48%)
 Frame = +2

Query: 86  SMASKVELVVEVKSPADKLWTGMRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYT 265
           S+  K+E  VE+K+ A K      E      K  P++    E  EGD    G++ + KY 
Sbjct: 6   SLVGKLETEVEIKASAKKFHHMFTERPHHVSKATPDKIHGCELHEGDWGKVGSIVIWKYV 65

Query: 266 EGVPMVTFXXXXXXXXXXXXXLVSYSVVDGELVSFYKNFRVTVQVTDKGSADGVGAVVNW 445
               + T              L+++ V++G+L++ YK+F  T+QVT K      G++ +W
Sbjct: 66  HDGKL-TVGKNKIEAVDPEKNLITFKVLEGDLMNEYKSFAFTLQVTPKQGES--GSIAHW 122

Query: 446 TMDFDR 463
            +++++
Sbjct: 123 HLEYEK 128

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>MLP28_ARATH (Q9SSK9) MLP-like protein 28|
          Length = 335

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 10/144 (6%)
 Frame = +2

Query: 62  IATLHPRR---------SMASKVELVVEVKSPADKLWTGMRESTELFPKIFPEQYKSIET 214
           +AT HP           S+  K+E  VE+K+ ADK             K  P   +  + 
Sbjct: 4   VATKHPMEDEVKKTEASSLVGKLETDVEIKASADKFHHMFAGKPHHVSKASPGNIQGCDL 63

Query: 215 VEGDGKSAGTVRLIKYT-EGVPMVTFXXXXXXXXXXXXXLVSYSVVDGELVSFYKNFRVT 391
            EGD  + G++    Y  +G   V               L+++ V++G+L+  YK+F +T
Sbjct: 64  HEGDWGTVGSIVFWNYVHDGEAKVA--KERIEAVEPDKNLITFRVIEGDLMKEYKSFLLT 121

Query: 392 VQVTDKGSADGVGAVVNWTMDFDR 463
           +QVT K    G G++V+W +++++
Sbjct: 122 IQVTPK--PGGPGSIVHWHLEYEK 143



 Score = 52.0 bits (123), Expect = 8e-07
 Identities = 32/126 (25%), Positives = 58/126 (46%)
 Frame = +2

Query: 86  SMASKVELVVEVKSPADKLWTGMRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYT 265
           S+  K+E  VE+K+ A+K             K  P   +  +  EGD    G++    Y 
Sbjct: 183 SLVGKLETDVEIKASAEKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWGQVGSIVFWNYV 242

Query: 266 EGVPMVTFXXXXXXXXXXXXXLVSYSVVDGELVSFYKNFRVTVQVTDKGSADGVGAVVNW 445
                                L+++ V+DG+L+  YK+F +T+QVT K    G G++V+W
Sbjct: 243 HDRE-AKVAKERIEAVEPNKNLITFRVIDGDLMKEYKSFLLTIQVTPK--LGGPGSIVHW 299

Query: 446 TMDFDR 463
            +++++
Sbjct: 300 HLEYEK 305

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>MLP34_ARATH (Q9SSK7) MLP-like protein 34|
          Length = 316

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 33/127 (25%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
 Frame = +2

Query: 86  SMASKVELVVEVKSPADKLWTGMRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYT 265
           S+  K+E  VE+K+ A +             K  P   +S +  EGD  + G++    Y 
Sbjct: 8   SLVGKLETEVEIKASAGQFHHMFAGKPHHVSKASPGNIQSCDLHEGDWGTVGSIVFWNYV 67

Query: 266 -EGVPMVTFXXXXXXXXXXXXXLVSYSVVDGELVSFYKNFRVTVQVTDKGSADGVGAVVN 442
            +G   V               L+++ V++G+L+  YK+F +T+QVT K    G G++V+
Sbjct: 68  HDGEAKVA--KERIEAVEPEKNLITFRVIEGDLMKEYKSFLITIQVTPKHG--GPGSIVH 123

Query: 443 WTMDFDR 463
           W +++++
Sbjct: 124 WHLEYEK 130



 Score = 49.3 bits (116), Expect = 5e-06
 Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
 Frame = +2

Query: 101 VELVVEVKSPADKLWTGMRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYT-EGVP 277
           +E  VE+K+ A+K             K  P   +S +  EGD  + G++    Y  +G  
Sbjct: 169 LETEVEIKASAEKFHHMFAGKPHHVSKATPGNIQSCDLHEGDWGTVGSIVFWNYVHDGEA 228

Query: 278 MVTFXXXXXXXXXXXXXLVSYSVVDGELVSFYKNFRVTVQVTDKGSADGVGAVVNWTMDF 457
            V               L+++ V++G+L+  YK+F +T+QVT K    G G+VV+W  ++
Sbjct: 229 KVA--KERIEAVDPEKNLITFRVIEGDLMKEYKSFVITIQVTPKHG--GSGSVVHWHFEY 284

Query: 458 DR 463
           ++
Sbjct: 285 EK 286

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>MLP31_ARATH (Q941R6) MLP-like protein 31|
          Length = 162

 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
 Frame = +2

Query: 86  SMASKVELVVEVKSPADKLWTGMRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYT 265
           S+  K+E  +E+K+ A K             K  P + +  E  EGD    G++    Y 
Sbjct: 10  SLCGKLETDIEIKASAGKFHHMFAGRPHHVSKATPGKIQGCELHEGDWGKVGSIVFWNYV 69

Query: 266 -EGVPMVTFXXXXXXXXXXXXXLVSYSVVDGELVSFYKNFRVTVQVTDKGSADGVGAVVN 442
            +G   V               L+++ V++G+L+  YK+F +T+QVT K    G G+VV+
Sbjct: 70  HDGEAKVA--KERIEAVEPEKNLITFRVIEGDLLKEYKSFVITIQVTPK--RGGPGSVVH 125

Query: 443 WTMDFDR 463
           W +++++
Sbjct: 126 WHVEYEK 132

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>MLP22_PAPSO (Q41020) Major latex protein 22 (MLP 22) (gMLP22)|
          Length = 158

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 1/131 (0%)
 Frame = +2

Query: 74  HPRRSMASKVELVVEVKSPADKLWTGMRESTELFPKIFPEQYKSIETVEGDGKSAGTVRL 253
           H    +  K+   +EV   AD+ +   +   +L P   P  Y+ ++ VEGD  ++G ++ 
Sbjct: 6   HTISGLVGKLVTELEVNCNADEYYKIFKHHEDL-PNAIPHIYRGVKAVEGDRITSGFIKE 64

Query: 254 IKYT-EGVPMVTFXXXXXXXXXXXXXLVSYSVVDGELVSFYKNFRVTVQVTDKGSADGVG 430
             Y  EG P+                 + +S V+G L+  YK F  T+ V  K  ADG G
Sbjct: 65  WHYIIEGKPLTC---KERTTYEDEARTIHHSTVEGVLLDDYKKFDATL-VNPK--ADGHG 118

Query: 431 AVVNWTMDFDR 463
           ++V W +++++
Sbjct: 119 SIVTWIVEYEK 129

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>RAP_TAROF (O49065) Root allergen protein (RAP)|
          Length = 157

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 24/63 (38%), Positives = 37/63 (58%)
 Frame = +2

Query: 176 PKIFPEQYKSIETVEGDGKSAGTVRLIKYTEGVPMVTFXXXXXXXXXXXXXLVSYSVVDG 355
           PK  PE YKSI+T+EGDG   GT++ I Y++GVP  T               +SY++ +G
Sbjct: 30  PKAEPETYKSIKTIEGDG-GVGTIKSITYSDGVPF-TSSKHKVDAIDSNNFSISYTIFEG 87

Query: 356 ELV 364
           +++
Sbjct: 88  DVL 90

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>PR13_PETCR (P19418) Pathogenesis-related protein B (PR1-3)|
          Length = 155

 Score = 45.8 bits (107), Expect = 6e-05
 Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 2/124 (1%)
 Frame = +2

Query: 95  SKVELVVEVKSPADKLWTGM-RESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTEG 271
           S+VE    V   A+KL+ G+  +   L P++ P   KS ET+EGDG   GTV+L+   + 
Sbjct: 6   SEVEATSSVS--AEKLFKGLCLDIDTLLPRVLPGAIKSSETLEGDG-GVGTVKLVHLGDA 62

Query: 272 VPMVTFXXXXXXXXXXXXXLVSYSVVDGE-LVSFYKNFRVTVQVTDKGSADGVGAVVNWT 448
            P  T                SYS++DG+ L+ F ++  +    T   +ADG G  V  T
Sbjct: 63  SPFKTMKQKVDAIDKATFT-YSYSIIDGDILLGFIES--INNHFTAVPNADG-GCTVKST 118

Query: 449 MDFD 460
           + F+
Sbjct: 119 IIFN 122

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>ML149_PAPSO (Q06395) Major latex protein 149 (MLP 149)|
          Length = 159

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
 Frame = +2

Query: 89  MASKVELVVEVKSPADKLWTGMRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYT- 265
           +  K+ +  EV   ADK +   +   +L P   P    S + VEG G ++G V+   Y  
Sbjct: 10  LVGKLVMETEVNCNADKYYQIYKHHEDL-PSAIPHIVTSAKAVEGHGTTSGCVKEWGYMH 68

Query: 266 EGVPMVTFXXXXXXXXXXXXXLVSYSVVDGELVSFYKNFRVTVQVTDKGSADGVGAVVNW 445
           EG    T               + +S+ +G+L++ YK F  T+ V  K   +G G++V +
Sbjct: 69  EGK---TLTCKEKTTYNDETRTICHSISEGDLMNDYKKFDATLVVDPKD--NGHGSIVKY 123

Query: 446 TMDFDR 463
            +D+++
Sbjct: 124 ILDYEK 129

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>ML168_ARATH (Q9C7I3) MLP-like protein 168|
          Length = 151

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
 Frame = +2

Query: 95  SKVELVVEVKSPADKLWTGMRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYT-EG 271
           ++VE+ VE+KS ADK +   R S            +  + +EG+    G++ L K T +G
Sbjct: 4   AEVEVDVEIKSTADKFFMFSRRSQHASKA--TRYVQGCDLLEGEWGEVGSILLWKLTVDG 61

Query: 272 VPMVTFXXXXXXXXXXXXXLVSYSVVDGELVSFYKNFRVTVQVTDKGSADGVGAVVNWTM 451
            P V+              ++ + V++G L   Y  F  T++V+ K    G G+VV W +
Sbjct: 62  EPKVS--KDMIEAIDMKMNMIQWRVLEGPLKEEYNIFSKTMKVSPK--QGGSGSVVKWNL 117

Query: 452 DFDR 463
            ++R
Sbjct: 118 KYER 121

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>RNS1_PANGI (P80889) Ribonuclease 1 (EC 3.1.-.-)|
          Length = 154

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
 Frame = +2

Query: 98  KVELVVEVKSPADKLWTGMR-ESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTEGV 274
           K E+      PA KL+ G+  +  ++ PK FP+  KS E +EGDG   GTV+L+   E  
Sbjct: 4   KTEVEATSTVPAQKLYAGLLLDIDDILPKAFPQAIKSSEIIEGDG-GVGTVKLVTLGEAS 62

Query: 275 PMVTFXXXXXXXXXXXXXLVSYSVVDGELV 364
              T                +YS++ G+++
Sbjct: 63  QFNTMKQRIDAIDKDALT-YTYSIIGGDIL 91

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>BEV1E_BETVE (P43178) Major pollen allergen Bet v 1-E (Bet v I-E)|
          Length = 159

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
 Frame = +2

Query: 128 PADKLWTG-MRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTEGVPMVTFXXXXX 304
           PA +L+   + +   LFPK+ P+   S+E +EG+G   GT++ I + EG+P   +     
Sbjct: 14  PAARLFKAFILDGDNLFPKVAPQAISSVENIEGNG-GPGTIKKISFPEGIPF-KYVKGRV 71

Query: 305 XXXXXXXXLVSYSVVDG 355
                     SYSV++G
Sbjct: 72  DEVDHTNFKYSYSVIEG 88

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>PR2_PETCR (P27538) Pathogenesis-related protein 2|
          Length = 158

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
 Frame = +2

Query: 113 VEVKS--PADKLWTG-MRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTEGVPMV 283
           VEV S  PA  ++ G + +   + PK+ P+  KSIE + GDG  AGT++ +   E V   
Sbjct: 8   VEVASSVPAQTIYKGFLLDMDNIIPKVLPQAIKSIEIISGDG-GAGTIKKVTLGE-VSQF 65

Query: 284 TFXXXXXXXXXXXXXLVSYSVVDGELV 364
           T                SYS+++G+L+
Sbjct: 66  TVVKQRIDEIDAEALKYSYSIIEGDLL 92

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>BEV1J_BETVE (P43183) Major pollen allergen Bet v 1-J (Bet v I-J)|
          Length = 159

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = +2

Query: 128 PADKLWTG-MRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTEGVPMVTFXXXXX 304
           PA +L+   + +   LFPK+ P+   S+E +EG+G   GT++ I + EG P   +     
Sbjct: 14  PAARLFKAFILDGDNLFPKVAPQAISSVENIEGNG-GPGTIKKISFPEGFPF-KYVKDRV 71

Query: 305 XXXXXXXXLVSYSVVDG 355
                     SYSV++G
Sbjct: 72  DEVDHTNFKYSYSVIEG 88

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>BEV1F_BETVE (P43179) Major pollen allergen Bet v 1-F/I (Bet v I-F/I)|
          Length = 159

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = +2

Query: 128 PADKLWTG-MRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTEGVPMVTFXXXXX 304
           PA +L+   + +   LFPK+ P+   S+E +EG+G   GT++ I + EG P   +     
Sbjct: 14  PAARLFKAFILDGDNLFPKVAPQAISSVENIEGNG-GPGTIKKISFPEGFPF-KYVKDRV 71

Query: 305 XXXXXXXXLVSYSVVDG 355
                     SYSV++G
Sbjct: 72  DEVDHTNFKYSYSVIEG 88

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>MPAC2_CARBE (P38950) Major pollen allergen Car b 1 isoform 2 (Car b I)|
          Length = 159

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
 Frame = +2

Query: 128 PADKLWTG-MRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTEGVPMVTFXXXXX 304
           PA +L+   + +  +L PK+ P+   S+E VEG+G   GT++ I ++EG P V +     
Sbjct: 14  PAARLFKAFILDGNKLIPKVSPQAVSSVENVEGNG-GPGTIKKITFSEGSP-VKYVKERV 71

Query: 305 XXXXXXXXLVSYSVVDGELV 364
                     +Y+V++G+++
Sbjct: 72  EEIDHTNFKYNYTVIEGDVL 91

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>ALL2_APIGR (P92918) Major allergen Api g 2 (Api g 1.0201)|
          Length = 159

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
 Frame = +2

Query: 110 VVEVKSP--ADKLWTG-MRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTEGVPM 280
           VVE  S   A+K++ G + +   +FPK+ P+  KS+E +EGDG   GTV+L+   E    
Sbjct: 7   VVEAPSTVSAEKMYQGFLLDMDTVFPKVLPQLIKSVEILEGDG-GVGTVKLVHLGEATEY 65

Query: 281 VT 286
            T
Sbjct: 66  TT 67

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>BEV1A_BETVE (P15494) Major pollen allergen Bet v 1-A (Bet v I-A)|
          Length = 159

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = +2

Query: 128 PADKLWTG-MRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTEGVPMVTFXXXXX 304
           PA +L+   + +   LFPK+ P+   S+E +EG+G   GT++ I + EG P   +     
Sbjct: 14  PAARLFKAFILDGDNLFPKVAPQAISSVENIEGNG-GPGTIKKISFPEGFPF-KYVKDRV 71

Query: 305 XXXXXXXXLVSYSVVDG 355
                     +YSV++G
Sbjct: 72  DEVDHTNFKYNYSVIEG 88

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>BEV1G_BETVE (P43180) Major pollen allergen Bet v 1-G (Bet v I-G)|
          Length = 159

 Score = 38.9 bits (89), Expect = 0.007
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
 Frame = +2

Query: 128 PADKLWTG-MRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTEGVPMVTFXXXXX 304
           PA +L+   + E   L PK+ P+   S+E +EG+G   GT++ I + EG P   +     
Sbjct: 14  PAARLFKAFILEGDNLIPKVAPQAISSVENIEGNG-GPGTIKKINFPEGFPF-KYVKDRV 71

Query: 305 XXXXXXXXLVSYSVVDG 355
                     +YSV++G
Sbjct: 72  DEVDHTNFKYNYSVIEG 88

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>RNS2_PANGI (P80890) Ribonuclease 2 (EC 3.1.-.-)|
          Length = 153

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 6/102 (5%)
 Frame = +2

Query: 128 PADKLWTG-MRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTEGVPMVTFXXXXX 304
           PA+KL+ G   +   + PK FPE  KS++ +EG+G   GT++ +   +  P  T      
Sbjct: 14  PAEKLFKGSFLDMDTVVPKAFPEGIKSVQVLEGNG-GVGTIKNVTLGDATPFNTMKTRID 72

Query: 305 XXXXXXXXLVSYSVVDGELV-----SFYKNFRVTVQVTDKGS 415
                     +Y+++ G+++     S   +F++    TD GS
Sbjct: 73  AIDEHAFT-YTYTIIGGDILLDIIESIENHFKIV--PTDGGS 111

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>MPAG1_ALNGL (P38948) Major pollen allergen Aln g 1 (Aln g I)|
          Length = 159

 Score = 38.1 bits (87), Expect = 0.012
 Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
 Frame = +2

Query: 128 PADKLWTG-MRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTEGVPMVTFXXXXX 304
           PA +L+   + +  +L PK+ PE   S+E +EG+G   GT++ I + EG P   +     
Sbjct: 14  PAARLFKAFILDGDKLLPKVAPEAVSSVENIEGNG-GPGTIKKITFPEGSPF-KYVKERV 71

Query: 305 XXXXXXXXLVSYSVVDGELV 364
                     S+SV++G  V
Sbjct: 72  DEVDRVNFKYSFSVIEGGAV 91

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>MPAC1_CARBE (P38949) Major pollen allergen Car b 1 isoforms 1A and 1B (Car B I)|
          Length = 159

 Score = 38.1 bits (87), Expect = 0.012
 Identities = 22/80 (27%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
 Frame = +2

Query: 128 PADKLWTG-MRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTEGVPMVTFXXXXX 304
           PA +L+   + +  +L PK+ P+   S+E V G+G   GT++ I + EG+P   F     
Sbjct: 14  PAARLFKSYVLDGDKLIPKVAPQVISSVENVGGNG-GPGTIKNITFAEGIPF-KFVKERV 71

Query: 305 XXXXXXXXLVSYSVVDGELV 364
                     +Y+V++G+++
Sbjct: 72  DEVDNANFKYNYTVIEGDVL 91

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>PR1_PHAVU (P25985) Pathogenesis-related protein 1 (PvPR1) (PR2)|
          Length = 155

 Score = 37.7 bits (86), Expect = 0.016
 Identities = 17/48 (35%), Positives = 29/48 (60%)
 Frame = +2

Query: 125 SPADKLWTGMRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTE 268
           +PA       +++  +FPK  P+ +KS+E VEG+G   GT++ I + E
Sbjct: 14  APATLYKAVAKDADTIFPKALPDSFKSVEIVEGNG-GPGTIKKISFVE 60

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>BEV1K_BETVE (P43184) Major pollen allergen Bet v 1-K (Bet v I-K)|
          Length = 159

 Score = 37.7 bits (86), Expect = 0.016
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
 Frame = +2

Query: 128 PADKLWTG-MRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTEGVPMVTFXXXXX 304
           PA +L+   + E   L PK+ P+   S+E +EG+G   GT++ I + EG P   +     
Sbjct: 14  PAARLFKAFILEGDTLIPKVAPQAISSVENIEGNG-GPGTIKKITFPEGSPF-KYVKERV 71

Query: 305 XXXXXXXXLVSYSVVDG 355
                     SYS+++G
Sbjct: 72  DEVDHANFKYSYSMIEG 88

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>BEV1C_BETVE (P43176) Major pollen allergen Bet v 1-C (Bet v I-C)|
          Length = 159

 Score = 37.7 bits (86), Expect = 0.016
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
 Frame = +2

Query: 128 PADKLWTG-MRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTEGVPMVTFXXXXX 304
           PA +L+   + E   L PK+ P+   S+E +EG+G   GT++ I + EG P   +     
Sbjct: 14  PAARLFKAFILEGDTLIPKVAPQAISSVENIEGNG-GPGTIKKITFPEGSPF-KYVKERV 71

Query: 305 XXXXXXXXLVSYSVVDG 355
                     SYS+++G
Sbjct: 72  DEVDHANFKYSYSMIEG 88

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>BEV1B_BETVE (P45431) Major pollen allergen Bet v 1-B (Bet v I-B)|
          Length = 159

 Score = 37.7 bits (86), Expect = 0.016
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
 Frame = +2

Query: 128 PADKLWTG-MRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTEGVPMVTFXXXXX 304
           PA +L+   + E   L PK+ P+   S+E +EG+G   GT++ I + EG P   +     
Sbjct: 14  PAARLFKAFILEGDTLIPKVAPQAISSVENIEGNG-GPGTIKKITFPEGSPF-KYVKERV 71

Query: 305 XXXXXXXXLVSYSVVDG 355
                     SYS+++G
Sbjct: 72  DEVDHANFKYSYSMIEG 88

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>BEV1D_BETVE (P43177) Major pollen allergen Bet v 1-D/H (Bet v I-D/H)|
          Length = 159

 Score = 37.4 bits (85), Expect = 0.021
 Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
 Frame = +2

Query: 128 PADKLWTG-MRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTEGVPMVTFXXXXX 304
           PA +L+   + +   L PK+ P+   S+E +EG+G   GT++ I + EG P   +     
Sbjct: 14  PAARLFKAFILDGDNLVPKVAPQAISSVENIEGNG-GPGTIKKINFPEGFPF-KYVKDRV 71

Query: 305 XXXXXXXXLVSYSVVDG 355
                     +YSV++G
Sbjct: 72  DEVDHTNFKYNYSVIEG 88

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>BEV1M_BETVE (P43186) Major pollen allergen Bet v 1-M/N (Bet v I-M/N)|
          Length = 159

 Score = 37.0 bits (84), Expect = 0.027
 Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
 Frame = +2

Query: 128 PADKLWTG-MRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTEGVPMVTFXXXXX 304
           PA +L+   + +   L PK+ P+   S+E +EG+G   GT++ I + EG P   +     
Sbjct: 14  PAARLFKAFILDGDNLIPKVAPQAISSVENIEGNG-GPGTIKKITFPEGSPF-KYVKERV 71

Query: 305 XXXXXXXXLVSYSVVDG 355
                     SYS+++G
Sbjct: 72  DEVDHANFKYSYSMIEG 88

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>BEV1L_BETVE (P43185) Major pollen allergen Bet v 1-L (Bet v I-L)|
          Length = 159

 Score = 37.0 bits (84), Expect = 0.027
 Identities = 19/66 (28%), Positives = 33/66 (50%)
 Frame = +2

Query: 158 ESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTEGVPMVTFXXXXXXXXXXXXXLVS 337
           +  +L PK+ P+   S+E +EG+G   GT++ I + EG P   +               +
Sbjct: 25  DGDKLVPKVAPQAISSVENIEGNG-GPGTIKKINFPEGFPF-KYVKDRVDEVDHTNFKYN 82

Query: 338 YSVVDG 355
           YSV++G
Sbjct: 83  YSVIEG 88

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>PRU1_PRUAR (O50001) Major allergen Pru ar 1|
          Length = 160

 Score = 35.8 bits (81), Expect = 0.060
 Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
 Frame = +2

Query: 128 PADKLWTG-MRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTEGVPMVTFXXXXX 304
           P +KL+   + ++  L PK+ P   K  E +EGDG   GT++ + + EG     +     
Sbjct: 15  PPEKLFKAFILDADNLIPKVAPTAVKGTEILEGDG-GVGTIKKVTFGEG-SQYAYVKHRV 72

Query: 305 XXXXXXXXLVSYSVVDGELVS-FYKNFRVTVQVTDKGSADGVGAVVNWTMDF 457
                     SY++++G+ +S   +N    +++    S DG G++V  T  +
Sbjct: 73  DGIDKDNLSYSYTLIEGDALSDVIENIAYDIKLV--ASPDG-GSIVKTTSHY 121

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>MPAC1_CORAV (Q08407) Major pollen allergen Cor a 1 isoforms 5, 6, 11 and 16|
           (Cor a I)
          Length = 159

 Score = 35.4 bits (80), Expect = 0.078
 Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
 Frame = +2

Query: 128 PADKLWTG-MRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTEGVPMVTFXXXXX 304
           PA +L+   + +  +L PK+ P+   S+E VEG+G   GT++ I + EG     +     
Sbjct: 14  PAARLFKSYVLDGDKLIPKVAPQAITSVENVEGNG-GPGTIKNITFGEG-SRYKYVKERV 71

Query: 305 XXXXXXXXLVSYSVVDGELV 364
                     SY+V++G+++
Sbjct: 72  DEVDNTNFTYSYTVIEGDVL 91

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>MAL12_MALDO (Q40280) Major allergen Mal d 1 (Mal d I) (AP15)|
          Length = 158

 Score = 33.1 bits (74), Expect = 0.39
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +2

Query: 158 ESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTEG 271
           ++  L PKI P+  K  E +EGDG   GT++ I + EG
Sbjct: 25  DADNLIPKIAPQAIKHAEILEGDG-GPGTIKKITFGEG 61

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>PRU1_PRUAV (O24248) Major allergen Pru av 1 (Pru a 1)|
          Length = 160

 Score = 32.3 bits (72), Expect = 0.66
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +2

Query: 158 ESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTEG 271
           ++  L PKI P+  K  E +EGDG   GT++ I + EG
Sbjct: 26  DADNLVPKIAPQAIKHSEILEGDG-GPGTIKKITFGEG 62

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>MAL11_MALDO (P43211) Major allergen Mal d 1 (Mal d I)|
          Length = 158

 Score = 32.0 bits (71), Expect = 0.87
 Identities = 18/70 (25%), Positives = 34/70 (48%)
 Frame = +2

Query: 158 ESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTEGVPMVTFXXXXXXXXXXXXXLVS 337
           ++  L PKI P+  K  E +EG+G   GT++ I + EG     +               S
Sbjct: 25  DADNLIPKIAPQAIKQAEILEGNG-GPGTIKKITFGEG-SQYGYVKHRIDSIDEASYSYS 82

Query: 338 YSVVDGELVS 367
           Y++++G+ ++
Sbjct: 83  YTLIEGDALT 92

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>O56A4_HUMAN (Q8NGH8) Olfactory receptor 56A4|
          Length = 313

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = -3

Query: 264 VYLMRRTVPADLPSPSTVSMLLYCSGKILGNSSVDSRIPVHSLSAGDFT 118
           V+++ R     LP P   + L YC+G I+ N  + S + V  LS  D T
Sbjct: 149 VFVIARNAFVSLPVPMLSARLRYCAGNIIKN-CICSNLSVSKLSCDDIT 196

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>THA_NECMA (O57606) Thyroid hormone receptor alpha|
          Length = 408

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
 Frame = +2

Query: 2   NH-KHHSPHFTDQVAGK--SFELIATLHPRRSMASKVELVVEVKSPADKLWTGMRESTEL 172
           NH KHH PHF  ++  K     +I   H  R M  KVE                   TEL
Sbjct: 352 NHRKHHIPHFWPKLLMKVTDLRMIGACHASRFMHMKVEC-----------------PTEL 394

Query: 173 FPKIFPEQYKSIE 211
           FP +F E ++  E
Sbjct: 395 FPPLFLEVFEDQE 407

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>PYRC1_PYRCO (O65200) Major allergen Pyr c 1|
          Length = 159

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +2

Query: 158 ESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTEG 271
           ++  L PKI P+  K  E +EG+G   GT++ I + EG
Sbjct: 26  DADNLIPKIAPQAIKHAEILEGNG-GPGTIKKITFGEG 62

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>L18B_LUPLU (P52779) Protein LlR18B (LlPR10.1B)|
          Length = 156

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 16/39 (41%), Positives = 26/39 (66%)
 Frame = +2

Query: 155 RESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTEG 271
           ++S ++ PK+  EQ +S+E VEG+G   GTV+ I  + G
Sbjct: 25  KDSDDIIPKVI-EQIQSVEIVEGNG-GPGTVKKITASHG 61

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>DRR3_PEA (P14710) Disease resistance response protein Pi49 (PR10)|
          Length = 158

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 18/53 (33%), Positives = 30/53 (56%)
 Frame = +2

Query: 110 VVEVKSPADKLWTGMRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTE 268
           +  V +PA      + ++  L PK+  +  KSIE VEG+G  AGT++ + + E
Sbjct: 10  ITSVVAPAILYKALVTDADNLTPKVI-DAIKSIEIVEGNG-GAGTIKKLTFVE 60

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>ML328_ARATH (Q9ZVF3) MLP-like protein 328|
          Length = 151

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
 Frame = +2

Query: 89  MASKVELVVEV--KSPADKLWTGMRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKY 262
           MA+    V EV  K  A+K +   R    LFP       + +   +G+  S G +++  Y
Sbjct: 1   MATSGTYVTEVPLKGSAEKHYKRWRSENHLFPDAIGHHIQGVTIHDGEWDSHGAIKIWNY 60

Query: 263 T-EGVPMV 283
           T +G P V
Sbjct: 61  TCDGKPEV 68

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>L18A_LUPLU (P52778) Protein LlR18A (LlPR10.1A)|
          Length = 156

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 18/68 (26%), Positives = 32/68 (47%)
 Frame = +2

Query: 155 RESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTEGVPMVTFXXXXXXXXXXXXXLV 334
           ++S E+ PK+  E  +S+E VEG+G      ++I   +G    +F               
Sbjct: 25  KDSDEIVPKVI-EPIQSVEIVEGNGGPGTIKKIIAIHDG--HTSFVLHKLDAIDEANLTY 81

Query: 335 SYSVVDGE 358
           +YS++ GE
Sbjct: 82  NYSIIGGE 89

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>O56A1_HUMAN (Q8NGH5) Olfactory receptor 56A1|
          Length = 314

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = -3

Query: 294 LANVTIGTPSVYLMRRTVPADLPSPSTVSMLLYCSGKILGNSSVDSRIPVHSLSAGDFT 118
           + N  +   SV+++ R      P P   S+L YC   ++ N  + + + V  LS  +FT
Sbjct: 139 ITNQFVAKASVFIVVRNALLTAPIPILTSLLHYCGENVIEN-CICANLSVSRLSCDNFT 196

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>SHH_XENLA (Q92000) Sonic hedgehog protein precursor (X-SHH) (VHH-1)|
           [Contains: Sonic hedgehog protein N-product; Sonic
           hedgehog protein C-product]
          Length = 444

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -2

Query: 178 GEQLRGFAHPRPQLVGRRLHLHHQLDLGRHRSTGMQSRNE 59
           G  L  + +PR       L  HHQ+DL  H    +QS ++
Sbjct: 363 GMSLSSYIYPRDSSPPSGLQPHHQVDLQSHHQVDLQSHHQ 402

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>ML329_ARATH (Q9ZVF2) MLP-like protein 329|
          Length = 151

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
 Frame = +2

Query: 89  MASKVELVVEV--KSPADKLWTGMRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKY 262
           MA+    V EV  K  ADK +   R+   LFP       + +   +G+  S   +++  Y
Sbjct: 1   MATSGTYVTEVPLKGSADKHYKRWRDENHLFPDAIGHHIQGVTVHDGEWDSHEAIKIWNY 60

Query: 263 T-EGVPMV 283
           T +G P V
Sbjct: 61  TCDGKPEV 68

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>DRR1_PEA (P13239) Disease resistance response protein Pi176|
          Length = 159

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 18/53 (33%), Positives = 30/53 (56%)
 Frame = +2

Query: 110 VVEVKSPADKLWTGMRESTELFPKIFPEQYKSIETVEGDGKSAGTVRLIKYTE 268
           +  V +PA      + ++  L PK+  +  KSIE VEG+G  AGT++ + + E
Sbjct: 10  ITSVVAPAILYKALVTDADTLTPKVI-DAIKSIEIVEGNG-GAGTIKKLTFVE 60

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>SEC65_KLULA (O13475) Signal recognition particle SEC65 subunit|
          Length = 270

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 15/65 (23%), Positives = 36/65 (55%)
 Frame = -3

Query: 282 TIGTPSVYLMRRTVPADLPSPSTVSMLLYCSGKILGNSSVDSRIPVHSLSAGDFTSTTSS 103
           ++G PS++   +T P D  +P  V +L+  +GK   +   + R+ +  +  G++  +  +
Sbjct: 131 SLGIPSIFEGSKTHPQDFGNPGRVRVLIKENGKPFVSGIDNKRVLMKRI--GEYLKSHPT 188

Query: 102 TLDAI 88
           TL+++
Sbjct: 189 TLESV 193

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>SC6A6_RAT (P31643) Sodium- and chloride-dependent taurine transporter|
          Length = 621

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
 Frame = -2

Query: 475 PRRWPVEVHG--PVHHRADAVGGALVRHLH 392
           P RW VE  G  P H RA  + GAL++  H
Sbjct: 585 PNRWAVEREGATPFHSRATLMNGALMKPSH 614

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>TNFA_MACEU (O77764) Tumor necrosis factor precursor (TNF-alpha) (Tumor|
           necrosis factor ligand superfamily member 2) (TNF-a)
           (Cachectin) [Contains: Tumor necrosis factor, membrane
           form; Tumor necrosis factor, soluble form]
          Length = 233

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 19/53 (35%), Positives = 27/53 (50%)
 Frame = +2

Query: 86  SMASKVELVVEVKSPADKLWTGMRESTELFPKIFPEQYKSIETVEGDGKSAGT 244
           S  SKV L+  +KSP  K   G RE++  +  I+      +E  +GD  SA T
Sbjct: 162 SYQSKVNLLSAIKSPCQKTVKGAREASPWYEPIYLGGVFQLE--KGDKLSADT 212

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>RIMM_BRUSU (P66652) Probable 16S rRNA-processing protein rimM|
          Length = 189

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 13/84 (15%)
 Frame = +2

Query: 44  GKSFELIATLHPRRSMASKVELVVEVKSPADKLWTGMRESTELF-------------PKI 184
           GK++E++       +  +K  ++V  K   D+        TELF              + 
Sbjct: 46  GKAYEIL------EARVAKTVVIVRFKGVNDRNAAEALNGTELFIDRSQLPDEELDEDEF 99

Query: 185 FPEQYKSIETVEGDGKSAGTVRLI 256
           F      +E V+GDGKS G V  I
Sbjct: 100 FQTDLIGLEAVDGDGKSYGVVSAI 123

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>RIMM_BRUME (P66651) Probable 16S rRNA-processing protein rimM|
          Length = 189

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 13/84 (15%)
 Frame = +2

Query: 44  GKSFELIATLHPRRSMASKVELVVEVKSPADKLWTGMRESTELF-------------PKI 184
           GK++E++       +  +K  ++V  K   D+        TELF              + 
Sbjct: 46  GKAYEIL------EARVAKTVVIVRFKGVNDRNAAEALNGTELFIDRSQLPDEELDEDEF 99

Query: 185 FPEQYKSIETVEGDGKSAGTVRLI 256
           F      +E V+GDGKS G V  I
Sbjct: 100 FQTDLIGLEAVDGDGKSYGVVSAI 123

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>TRUB_RHORT (Q2RMR8) tRNA pseudouridine synthase B (EC 5.4.99.-) (tRNA|
           pseudouridine 55 synthase) (Psi55 synthase)
           (tRNA-uridine isomerase) (tRNA pseudouridylate synthase)
          Length = 308

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -3

Query: 180 LGNSSVDSRIPVHSLSAGDFTSTTSSTLDAIDRRGCKVAMSSKLLP 43
           L   +V   + +  L+ G FT+ T+ +LD +D  G     S  LLP
Sbjct: 189 LALGTVGHVVALRRLACGPFTAETAISLDMVDALGHDAPHSESLLP 234


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,233,831
Number of Sequences: 219361
Number of extensions: 677157
Number of successful extensions: 2550
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 2501
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2542
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result