ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast75f12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 46 0.043
2gb|AC164075.4| Mus musculus chromosome 7, clone RP24-259P13, com... 44 0.17
3gb|AC110903.25| Mus musculus chromosome 7, clone RP24-174G2, com... 44 0.17
4gb|BC058640.1| Mus musculus zinc finger protein 710, mRNA (cDNA ... 44 0.17
5dbj|AK154953.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 44 0.17
6dbj|AK154871.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 44 0.17
7dbj|AK155416.1| Mus musculus NOD-derived CD11c +ve dendritic cel... 44 0.17
8dbj|AK083979.1| Mus musculus 12 days embryo spinal ganglion cDNA... 44 0.17
9ref|XM_214980.3| PREDICTED: Rattus norvegicus similar to zinc fi... 44 0.17
10gb|BC060641.1| Mus musculus zinc finger protein 710, mRNA (cDNA ... 44 0.17
11ref|NM_175433.4| Mus musculus zinc finger protein 710 (Zfp710), ... 44 0.17
12ref|NM_185735.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.67
13ref|NM_185730.1| Oryza sativa (japonica cultivar-group), mRNA 42 0.67
14gb|AC105260.2| Oryza sativa (japonica cultivar-group) chromosome... 42 0.67
15gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 42 0.67
16dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.67
17dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.67
18dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.67
19dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic D... 42 0.67
20dbj|AP005531.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.67
21dbj|AP004656.3| Oryza sativa (japonica cultivar-group) genomic D... 42 0.67
22dbj|AK107337.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 0.67
23dbj|AP003960.2| Oryza sativa (japonica cultivar-group) genomic D... 42 0.67
24ref|XM_466797.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.6
25ref|XM_477028.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.6
26gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome... 40 2.6
27ref|XM_959080.1| Neurospora crassa OR74A hypothetical protein (N... 40 2.6
28ref|XM_330515.1| Neurospora crassa OR74A hypothetical protein (N... 40 2.6
29gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 2.6
30ref|XM_844561.1| PREDICTED: Canis familiaris similar to catenin,... 40 2.6
31emb|AL353638.15| Human DNA sequence from clone RP11-338L20 on ch... 40 2.6
32emb|AJ001045.2|BEPAT1 Blastocladiella emersonii PAT1 gene for P-... 40 2.6
33gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genom... 40 2.6
34gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 2.6
35emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 2.6
36emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete ... 40 2.6
37gb|AF367982.1|AF367982 Pyrodictium occultum transcription factor... 40 2.6
38dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.6
39dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.6
40dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.6
41dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.6
42dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 2.6
43dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 2.6
44dbj|AP004729.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.6
45dbj|AP003620.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.6
46dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.6
47dbj|AP004059.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.6
48dbj|AP004053.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.6
49dbj|AK119988.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.6
50dbj|AP005259.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.6
51dbj|AK107056.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.6
52dbj|AK102756.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.6
53gb|AF205944.1|AF205944 Blastocladiella emersonii P-Type cation-t... 40 2.6
54gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 2.6 
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 46.1 bits (23), Expect = 0.043
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 170     gcttctcctgctcgtcgccgccg 192
               |||||||||||||||||||||||
Sbjct: 3533272 gcttctcctgctcgtcgccgccg 3533250
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>gb|AC164075.4| Mus musculus chromosome 7, clone RP24-259P13, complete sequence
          Length = 159578

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 126   gccgcaagccccggacactccg 147
             ||||||||||||||||||||||
Sbjct: 76419 gccgcaagccccggacactccg 76440
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>gb|AC110903.25| Mus musculus chromosome 7, clone RP24-174G2, complete sequence
          Length = 181076

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 126    gccgcaagccccggacactccg 147
              ||||||||||||||||||||||
Sbjct: 178343 gccgcaagccccggacactccg 178364
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>gb|BC058640.1| Mus musculus zinc finger protein 710, mRNA (cDNA clone MGC:73501
           IMAGE:6835601), complete cds
          Length = 4361

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 126 gccgcaagccccggacactccg 147
           ||||||||||||||||||||||
Sbjct: 592 gccgcaagccccggacactccg 613
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>dbj|AK154953.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630112M12
           product:Hypothetical zinc finger homolog [Mus musculus],
           full insert sequence
          Length = 4443

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 126 gccgcaagccccggacactccg 147
           ||||||||||||||||||||||
Sbjct: 699 gccgcaagccccggacactccg 720
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>dbj|AK154871.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630110D23
           product:Hypothetical zinc finger homolog [Mus musculus],
           full insert sequence
          Length = 3607

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 126 gccgcaagccccggacactccg 147
           ||||||||||||||||||||||
Sbjct: 679 gccgcaagccccggacactccg 700
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>dbj|AK155416.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630225N15
           product:hypothetical Zn-finger, C2H2 type/Cytochrome c
           heme-binding site containing protein, full insert
           sequence
          Length = 3592

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 126 gccgcaagccccggacactccg 147
           ||||||||||||||||||||||
Sbjct: 760 gccgcaagccccggacactccg 781
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>dbj|AK083979.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
           enriched library, clone:D130071H01 product:weakly
           similar to ZINC FINGER PROTEIN [Fugu rubripes], full
           insert sequence
          Length = 2199

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 126 gccgcaagccccggacactccg 147
           ||||||||||||||||||||||
Sbjct: 623 gccgcaagccccggacactccg 644
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>ref|XM_214980.3| PREDICTED: Rattus norvegicus similar to zinc finger protein 366
           (predicted) (LOC293044), mRNA
          Length = 2248

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 126 gccgcaagccccggacactccg 147
           ||||||||||||||||||||||
Sbjct: 675 gccgcaagccccggacactccg 696
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>gb|BC060641.1| Mus musculus zinc finger protein 710, mRNA (cDNA clone MGC:79151
           IMAGE:6849964), complete cds
          Length = 4485

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 126 gccgcaagccccggacactccg 147
           ||||||||||||||||||||||
Sbjct: 675 gccgcaagccccggacactccg 696
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>ref|NM_175433.4| Mus musculus zinc finger protein 710 (Zfp710), mRNA
          Length = 4485

 Score = 44.1 bits (22), Expect = 0.17
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 126 gccgcaagccccggacactccg 147
           ||||||||||||||||||||||
Sbjct: 675 gccgcaagccccggacactccg 696
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>ref|NM_185735.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1050

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 145 ccgccctccccgccgctgccttcgt 169
           |||||||||||| ||||||||||||
Sbjct: 53  ccgccctccccgtcgctgccttcgt 29
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>ref|NM_185730.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1890

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 145 ccgccctccccgccgctgccttcgt 169
           |||||||||||| ||||||||||||
Sbjct: 53  ccgccctccccgtcgctgccttcgt 29
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>gb|AC105260.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_D04,
             complete sequence
          Length = 100800

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 185   cgccgccgcaccgcccgccgt 205
             |||||||||||||||||||||
Sbjct: 32343 cgccgccgcaccgcccgccgt 32363
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 184    tcgccgccgcaccgcccgccg 204
              |||||||||||||||||||||
Sbjct: 389434 tcgccgccgcaccgcccgccg 389454
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 176     cctgctcgtcgccgccgcacc 196
               |||||||||||||||||||||
Sbjct: 5143593 cctgctcgtcgccgccgcacc 5143613
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 145      ccgccctccccgccgctgccttcgt 169
                |||||||||||| ||||||||||||
Sbjct: 21689778 ccgccctccccgtcgctgccttcgt 21689802



 Score = 42.1 bits (21), Expect = 0.67
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 145      ccgccctccccgccgctgccttcgt 169
                |||||||||||| ||||||||||||
Sbjct: 21678442 ccgccctccccgtcgctgccttcgt 21678466



 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 185     cgccgccgcaccgcccgccg 204
               ||||||||||||||||||||
Sbjct: 5501103 cgccgccgcaccgcccgccg 5501084
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 185      cgccgccgcaccgcccgccgt 205
                |||||||||||||||||||||
Sbjct: 29106119 cgccgccgcaccgcccgccgt 29106139
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>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
            clone:P0534A03
          Length = 153170

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 145  ccgccctccccgccgctgccttcgt 169
            |||||||||||| ||||||||||||
Sbjct: 6961 ccgccctccccgtcgctgccttcgt 6985
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>dbj|AP005531.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1099H05
          Length = 186036

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 176   cctgctcgtcgccgccgcacc 196
             |||||||||||||||||||||
Sbjct: 11949 cctgctcgtcgccgccgcacc 11969
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>dbj|AP004656.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0020B10
          Length = 136175

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 176   cctgctcgtcgccgccgcacc 196
             |||||||||||||||||||||
Sbjct: 93357 cctgctcgtcgccgccgcacc 93377
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>dbj|AK107337.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-F11, full
           insert sequence
          Length = 1611

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 176 cctgctcgtcgccgccgcacc 196
           |||||||||||||||||||||
Sbjct: 396 cctgctcgtcgccgccgcacc 376
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>dbj|AP003960.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1612_A04
          Length = 124833

 Score = 42.1 bits (21), Expect = 0.67
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 145    ccgccctccccgccgctgccttcgt 169
              |||||||||||| ||||||||||||
Sbjct: 120234 ccgccctccccgtcgctgccttcgt 120258



 Score = 42.1 bits (21), Expect = 0.67
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 145    ccgccctccccgccgctgccttcgt 169
              |||||||||||| ||||||||||||
Sbjct: 108898 ccgccctccccgtcgctgccttcgt 108922
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>ref|XM_466797.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 390

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 185 cgccgccgcaccgcccgccg 204
           ||||||||||||||||||||
Sbjct: 70  cgccgccgcaccgcccgccg 89
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>ref|XM_477028.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 330

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 185 cgccgccgcaccgcccgccg 204
           ||||||||||||||||||||
Sbjct: 42  cgccgccgcaccgcccgccg 61
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>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0005P21, complete sequence
          Length = 147381

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   gccgccgcaccgcccgccgt 205
             ||||||||||||||||||||
Sbjct: 67585 gccgccgcaccgcccgccgt 67566
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>ref|XM_959080.1| Neurospora crassa OR74A hypothetical protein (NCU03080.1) partial
           mRNA
          Length = 1764

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 177 ctgctcgtcgccgccgcacc 196
           ||||||||||||||||||||
Sbjct: 82  ctgctcgtcgccgccgcacc 101
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>ref|XM_330515.1| Neurospora crassa OR74A hypothetical protein (NCU03080.1) partial
           mRNA
          Length = 1764

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 177 ctgctcgtcgccgccgcacc 196
           ||||||||||||||||||||
Sbjct: 82  ctgctcgtcgccgccgcacc 101
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 185      cgccgccgcaccgcccgccg 204
                ||||||||||||||||||||
Sbjct: 25066927 cgccgccgcaccgcccgccg 25066946
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>ref|XM_844561.1| PREDICTED: Canis familiaris similar to catenin, alpha 3,
          transcript variant 3 (LOC489008), mRNA
          Length = 2970

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 1  actgccccactgccactgcc 20
          ||||||||||||||||||||
Sbjct: 11 actgccccactgccactgcc 30
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>emb|AL353638.15| Human DNA sequence from clone RP11-338L20 on chromosome 9 Contains a
             ribosomal protein S26 pseudogene 3 and part the 5' UTR of
             the PTPRD gene for protein tyrosine phosphatase, receptor
             type, D (HPTP, PTPD, HPTPD), complete sequence
          Length = 161067

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     ctgccccactgccactgccc 21
             ||||||||||||||||||||
Sbjct: 67016 ctgccccactgccactgccc 66997
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>emb|AJ001045.2|BEPAT1 Blastocladiella emersonii PAT1 gene for P-type cation-transporting
           ATPase
          Length = 3747

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 ctcctgctcgtcgccgccgc 193
           ||||||||||||||||||||
Sbjct: 437 ctcctgctcgtcgccgccgc 456
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>gb|AC138001.2| Oryza sativa chromosome 3 BAC OSJNBa0093M23 genomic sequence, complete
             sequence
          Length = 170020

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   cgccgccgcaccgcccgccg 204
             ||||||||||||||||||||
Sbjct: 98734 cgccgccgcaccgcccgccg 98753
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 104     cattgaagccatggcagccg 123
               ||||||||||||||||||||
Sbjct: 1369309 cattgaagccatggcagccg 1369328
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    ccgccctccccgccgctgcc 164
              ||||||||||||||||||||
Sbjct: 317327 ccgccctccccgccgctgcc 317346
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>emb|AL939115.1|SCO939115 Streptomyces coelicolor A3(2) complete genome; segment 12/29
          Length = 276800

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 182    cgtcgccgccgcaccgcccg 201
              ||||||||||||||||||||
Sbjct: 232875 cgtcgccgccgcaccgcccg 232856
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>gb|AF367982.1|AF367982 Pyrodictium occultum transcription factor B (tfb) gene, complete
           cds
          Length = 933

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 119 agccgctgccgcaagccccg 138
           ||||||||||||||||||||
Sbjct: 792 agccgctgccgcaagccccg 773
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 186      gccgccgcaccgcccgccgt 205
                ||||||||||||||||||||
Sbjct: 11546203 gccgccgcaccgcccgccgt 11546222
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 174      ctcctgctcgtcgccgccgc 193
                ||||||||||||||||||||
Sbjct: 21897936 ctcctgctcgtcgccgccgc 21897955



 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 182      cgtcgccgccgcaccgcccgccgt 205
                |||||||||||| |||||||||||
Sbjct: 17324111 cgtcgccgccgcgccgcccgccgt 17324088
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 185      cgccgccgcaccgcccgccg 204
                ||||||||||||||||||||
Sbjct: 25158236 cgccgccgcaccgcccgccg 25158255
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 185      cgccgccgcaccgcccgccg 204
                ||||||||||||||||||||
Sbjct: 24722980 cgccgccgcaccgcccgccg 24722961
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 185    cgccgccgcaccgcccgccg 204
              ||||||||||||||||||||
Sbjct: 711464 cgccgccgcaccgcccgccg 711445
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 177    ctgctcgtcgccgccgcacc 196
              ||||||||||||||||||||
Sbjct: 103694 ctgctcgtcgccgccgcacc 103713
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>dbj|AP004729.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0006A22
          Length = 190690

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 174    ctcctgctcgtcgccgccgc 193
              ||||||||||||||||||||
Sbjct: 120421 ctcctgctcgtcgccgccgc 120440
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>dbj|AP003620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0596H06
          Length = 142832

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 182   cgtcgccgccgcaccgcccgccgt 205
             |||||||||||| |||||||||||
Sbjct: 60704 cgtcgccgccgcgccgcccgccgt 60681
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>dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0081K20
          Length = 117287

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 185   cgccgccgcaccgcccgccg 204
             ||||||||||||||||||||
Sbjct: 14188 cgccgccgcaccgcccgccg 14169
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>dbj|AP004059.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1372_D06
          Length = 129242

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 185    cgccgccgcaccgcccgccg 204
              ||||||||||||||||||||
Sbjct: 104378 cgccgccgcaccgcccgccg 104359
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>dbj|AP004053.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1234_B11
          Length = 128095

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 185   cgccgccgcaccgcccgccg 204
             ||||||||||||||||||||
Sbjct: 22628 cgccgccgcaccgcccgccg 22609
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>dbj|AK119988.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-G03, full
           insert sequence
          Length = 865

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 184 tcgccgccgcaccgcccgcc 203
           ||||||||||||||||||||
Sbjct: 376 tcgccgccgcaccgcccgcc 395
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>dbj|AP005259.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0519E02
          Length = 139321

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 185    cgccgccgcaccgcccgccg 204
              ||||||||||||||||||||
Sbjct: 135084 cgccgccgcaccgcccgccg 135065
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>dbj|AK107056.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-D08, full
           insert sequence
          Length = 786

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 182 cgtcgccgccgcaccgcccgccgt 205
           |||||||||||| |||||||||||
Sbjct: 226 cgtcgccgccgcgccgcccgccgt 249
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>dbj|AK102756.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033107B05, full
           insert sequence
          Length = 2847

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 ctcctgctcgtcgccgccgc 193
           ||||||||||||||||||||
Sbjct: 372 ctcctgctcgtcgccgccgc 391
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>gb|AF205944.1|AF205944 Blastocladiella emersonii P-Type cation-transporting ATPase (PAT2)
           gene, complete cds
          Length = 4736

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 174 ctcctgctcgtcgccgccgc 193
           ||||||||||||||||||||
Sbjct: 472 ctcctgctcgtcgccgccgc 491
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 2.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 186      gccgccgcaccgcccgccgt 205
                ||||||||||||||||||||
Sbjct: 11625392 gccgccgcaccgcccgccgt 11625411


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,780,332
Number of Sequences: 3902068
Number of extensions: 1780332
Number of successful extensions: 163561
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 161332
Number of HSP's gapped (non-prelim): 2229
length of query: 209
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 187
effective length of database: 17,147,199,772
effective search space: 3206526357364
effective search space used: 3206526357364
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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