| Clone Name | bast75f11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC137621.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0111O13, complete sequence Length = 126332 Score = 103 bits (52), Expect = 5e-19 Identities = 118/140 (84%) Strand = Plus / Minus Query: 111 ccgacgacatcatcctggagatcctctcccgcctcccggtcagatccctccaccgcttca 170 |||||||| ||||| ||||||||||||| || ||||||| || |||| || |||||||| Sbjct: 24817 ccgacgacctcatcgtggagatcctctcgcgtctcccggccaaatccgtctgccgcttca 24758 Query: 171 agtgcgtctccgtgccatggcgcgacctcatcgccgaccccgccaaccgcaagaagctcc 230 ||||||||||| || |||||| ||||||| || ||| || | ||||||||||||||| Sbjct: 24757 agtgcgtctcctggcgctggcgccgcctcatctcccaccgcgaccaccgcaagaagctcc 24698 Query: 231 cccaaaccctcgccggcttc 250 |||| || |||||||||||| Sbjct: 24697 cccacacgctcgccggcttc 24678 Score = 93.7 bits (47), Expect = 5e-16 Identities = 119/143 (83%) Strand = Plus / Minus Query: 108 tccccgacgacatcatcctggagatcctctcccgcctcccggtcagatccctccaccgct 167 ||||||||||| ||||| |||| |||||||| || ||||||| || |||| || ||||| Sbjct: 31666 tccccgacgacctcatcgtggatatcctctcgcgtctcccggccaaatccgtctgccgct 31607 Query: 168 tcaagtgcgtctccgtgccatggcgcgacctcatcgccgaccccgccaaccgcaagaagc 227 |||||||||||||| || |||||| ||||||| || ||| || | |||||||||||| Sbjct: 31606 tcaagtgcgtctcctggcgctggcgccgcctcatctcccaccgcgaccaccgcaagaagc 31547 Query: 228 tcccccaaaccctcgccggcttc 250 ||||||| || ||| |||||||| Sbjct: 31546 tcccccacacgctctccggcttc 31524
>gb|AC137616.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0069I13, complete sequence Length = 94252 Score = 103 bits (52), Expect = 5e-19 Identities = 118/140 (84%) Strand = Plus / Minus Query: 111 ccgacgacatcatcctggagatcctctcccgcctcccggtcagatccctccaccgcttca 170 |||||||| ||||| ||||||||||||| || ||||||| || |||| || |||||||| Sbjct: 61615 ccgacgacctcatcgtggagatcctctcgcgtctcccggccaaatccgtctgccgcttca 61556 Query: 171 agtgcgtctccgtgccatggcgcgacctcatcgccgaccccgccaaccgcaagaagctcc 230 ||||||||||| || |||||| ||||||| || ||| || | ||||||||||||||| Sbjct: 61555 agtgcgtctcctggcgctggcgccgcctcatctcccaccgcgaccaccgcaagaagctcc 61496 Query: 231 cccaaaccctcgccggcttc 250 |||| || |||||||||||| Sbjct: 61495 cccacacgctcgccggcttc 61476 Score = 93.7 bits (47), Expect = 5e-16 Identities = 119/143 (83%) Strand = Plus / Minus Query: 108 tccccgacgacatcatcctggagatcctctcccgcctcccggtcagatccctccaccgct 167 ||||||||||| ||||| |||| |||||||| || ||||||| || |||| || ||||| Sbjct: 68464 tccccgacgacctcatcgtggatatcctctcgcgtctcccggccaaatccgtctgccgct 68405 Query: 168 tcaagtgcgtctccgtgccatggcgcgacctcatcgccgaccccgccaaccgcaagaagc 227 |||||||||||||| || |||||| ||||||| || ||| || | |||||||||||| Sbjct: 68404 tcaagtgcgtctcctggcgctggcgccgcctcatctcccaccgcgaccaccgcaagaagc 68345 Query: 228 tcccccaaaccctcgccggcttc 250 ||||||| || ||| |||||||| Sbjct: 68344 tcccccacacgctctccggcttc 68322
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 103 bits (52), Expect = 5e-19 Identities = 118/140 (84%) Strand = Plus / Minus Query: 111 ccgacgacatcatcctggagatcctctcccgcctcccggtcagatccctccaccgcttca 170 |||||||| ||||| ||||||||||||| || ||||||| || |||| || |||||||| Sbjct: 2192386 ccgacgacctcatcgtggagatcctctcgcgtctcccggccaaatccgtctgccgcttca 2192327 Query: 171 agtgcgtctccgtgccatggcgcgacctcatcgccgaccccgccaaccgcaagaagctcc 230 ||||||||||| || |||||| ||||||| || ||| || | ||||||||||||||| Sbjct: 2192326 agtgcgtctcctggcgctggcgccgcctcatctcccaccgcgaccaccgcaagaagctcc 2192267 Query: 231 cccaaaccctcgccggcttc 250 |||| || |||||||||||| Sbjct: 2192266 cccacacgctcgccggcttc 2192247 Score = 101 bits (51), Expect = 2e-18 Identities = 108/127 (85%) Strand = Plus / Minus Query: 131 atcctctcccgcctcccggtcagatccctccaccgcttcaagtgcgtctccgtgccatgg 190 ||||||||||||||||| |||| || || ||| | ||||||||| ||| || ||| Sbjct: 4251275 atcctctcccgcctccccgtcaagtcggtctgccgatgcaagtgcgtgtccaggcggtgg 4251216 Query: 191 cgcgacctcatcgccgaccccgccaaccgcaagaagctcccccaaaccctcgccggcttc 250 |||| ||||||| ||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 4251215 cgcggcctcatctccgaccccgaccaccgcaagaagctcccccaaaccctcgccggcttc 4251156 Query: 251 ctctaca 257 |||||| Sbjct: 4251155 ttctaca 4251149 Score = 97.6 bits (49), Expect = 3e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 188 tggcgcgacctcatcgccgaccccgccaaccgcaagaagctcccccaaaccctcgccggc 247 ||||||| ||||||| ||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 4267954 tggcgcggcctcatctccgaccccgaccaccgcaagaagctcccccaaaccctcgccggc 4267895 Query: 248 ttcctctac 256 ||| ||||| Sbjct: 4267894 ttcttctac 4267886 Score = 97.6 bits (49), Expect = 3e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 188 tggcgcgacctcatcgccgaccccgccaaccgcaagaagctcccccaaaccctcgccggc 247 ||||||| ||||||| ||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 4255082 tggcgcggcctcatctccgaccccgaccaccgcaagaagctcccccaaaccctcgccggc 4255023 Query: 248 ttcctctac 256 ||| ||||| Sbjct: 4255022 ttcttctac 4255014 Score = 93.7 bits (47), Expect = 5e-16 Identities = 119/143 (83%) Strand = Plus / Minus Query: 108 tccccgacgacatcatcctggagatcctctcccgcctcccggtcagatccctccaccgct 167 ||||||||||| ||||| |||| |||||||| || ||||||| || |||| || ||||| Sbjct: 2199235 tccccgacgacctcatcgtggatatcctctcgcgtctcccggccaaatccgtctgccgct 2199176 Query: 168 tcaagtgcgtctccgtgccatggcgcgacctcatcgccgaccccgccaaccgcaagaagc 227 |||||||||||||| || |||||| ||||||| || ||| || | |||||||||||| Sbjct: 2199175 tcaagtgcgtctcctggcgctggcgccgcctcatctcccaccgcgaccaccgcaagaagc 2199116 Query: 228 tcccccaaaccctcgccggcttc 250 ||||||| || ||| |||||||| Sbjct: 2199115 tcccccacacgctctccggcttc 2199093 Score = 69.9 bits (35), Expect = 7e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 216 accgcaagaagctcccccaaaccctcgccggcttc 250 ||||||||||||||||||||||||||||||||||| Sbjct: 4271915 accgcaagaagctcccccaaaccctcgccggcttc 4271881 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 111 ccgacgacatcatcctggagatcctctcccgcctcccgg 149 |||||||| ||||| |||||||||||||||||||||||| Sbjct: 4268038 ccgacgacctcatcgtggagatcctctcccgcctcccgg 4268000 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 111 ccgacgacatcatcctggagatcctctcccgcctccc 147 |||||||| ||||| |||||||||||||||||||||| Sbjct: 4272020 ccgacgacctcatcgtggagatcctctcccgcctccc 4271984 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 ccctcgccggcttcctctac 256 |||||||||||||||||||| Sbjct: 4552210 ccctcgccggcttcctctac 4552229
>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10, complete sequence Length = 156772 Score = 101 bits (51), Expect = 2e-18 Identities = 108/127 (85%) Strand = Plus / Minus Query: 131 atcctctcccgcctcccggtcagatccctccaccgcttcaagtgcgtctccgtgccatgg 190 ||||||||||||||||| |||| || || ||| | ||||||||| ||| || ||| Sbjct: 137754 atcctctcccgcctccccgtcaagtcggtctgccgatgcaagtgcgtgtccaggcggtgg 137695 Query: 191 cgcgacctcatcgccgaccccgccaaccgcaagaagctcccccaaaccctcgccggcttc 250 |||| ||||||| ||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 137694 cgcggcctcatctccgaccccgaccaccgcaagaagctcccccaaaccctcgccggcttc 137635 Query: 251 ctctaca 257 |||||| Sbjct: 137634 ttctaca 137628 Score = 97.6 bits (49), Expect = 3e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 188 tggcgcgacctcatcgccgaccccgccaaccgcaagaagctcccccaaaccctcgccggc 247 ||||||| ||||||| ||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 154433 tggcgcggcctcatctccgaccccgaccaccgcaagaagctcccccaaaccctcgccggc 154374 Query: 248 ttcctctac 256 ||| ||||| Sbjct: 154373 ttcttctac 154365 Score = 97.6 bits (49), Expect = 3e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 188 tggcgcgacctcatcgccgaccccgccaaccgcaagaagctcccccaaaccctcgccggc 247 ||||||| ||||||| ||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 141561 tggcgcggcctcatctccgaccccgaccaccgcaagaagctcccccaaaccctcgccggc 141502 Query: 248 ttcctctac 256 ||| ||||| Sbjct: 141501 ttcttctac 141493 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 111 ccgacgacatcatcctggagatcctctcccgcctcccgg 149 |||||||| ||||| |||||||||||||||||||||||| Sbjct: 154517 ccgacgacctcatcgtggagatcctctcccgcctcccgg 154479
>gb|AC136228.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0672D07, complete sequence Length = 136465 Score = 101 bits (51), Expect = 2e-18 Identities = 108/127 (85%) Strand = Plus / Minus Query: 131 atcctctcccgcctcccggtcagatccctccaccgcttcaagtgcgtctccgtgccatgg 190 ||||||||||||||||| |||| || || ||| | ||||||||| ||| || ||| Sbjct: 5882 atcctctcccgcctccccgtcaagtcggtctgccgatgcaagtgcgtgtccaggcggtgg 5823 Query: 191 cgcgacctcatcgccgaccccgccaaccgcaagaagctcccccaaaccctcgccggcttc 250 |||| ||||||| ||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct: 5822 cgcggcctcatctccgaccccgaccaccgcaagaagctcccccaaaccctcgccggcttc 5763 Query: 251 ctctaca 257 |||||| Sbjct: 5762 ttctaca 5756 Score = 97.6 bits (49), Expect = 3e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 188 tggcgcgacctcatcgccgaccccgccaaccgcaagaagctcccccaaaccctcgccggc 247 ||||||| ||||||| ||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 22561 tggcgcggcctcatctccgaccccgaccaccgcaagaagctcccccaaaccctcgccggc 22502 Query: 248 ttcctctac 256 ||| ||||| Sbjct: 22501 ttcttctac 22493 Score = 97.6 bits (49), Expect = 3e-17 Identities = 64/69 (92%) Strand = Plus / Minus Query: 188 tggcgcgacctcatcgccgaccccgccaaccgcaagaagctcccccaaaccctcgccggc 247 ||||||| ||||||| ||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 9689 tggcgcggcctcatctccgaccccgaccaccgcaagaagctcccccaaaccctcgccggc 9630 Query: 248 ttcctctac 256 ||| ||||| Sbjct: 9629 ttcttctac 9621 Score = 69.9 bits (35), Expect = 7e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 216 accgcaagaagctcccccaaaccctcgccggcttc 250 ||||||||||||||||||||||||||||||||||| Sbjct: 26522 accgcaagaagctcccccaaaccctcgccggcttc 26488 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 111 ccgacgacatcatcctggagatcctctcccgcctcccgg 149 |||||||| ||||| |||||||||||||||||||||||| Sbjct: 22645 ccgacgacctcatcgtggagatcctctcccgcctcccgg 22607 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Minus Query: 111 ccgacgacatcatcctggagatcctctcccgcctccc 147 |||||||| ||||| |||||||||||||||||||||| Sbjct: 26627 ccgacgacctcatcgtggagatcctctcccgcctccc 26591
>dbj|AK105962.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-E03, full insert sequence Length = 1708 Score = 97.6 bits (49), Expect = 3e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 188 tggcgcgacctcatcgccgaccccgccaaccgcaagaagctcccccaaaccctcgccggc 247 ||||||| ||||||| ||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 213 tggcgcggcctcatctccgaccccgaccaccgcaagaagctcccccaaaccctcgccggc 272 Query: 248 ttcctctac 256 ||| ||||| Sbjct: 273 ttcttctac 281
>dbj|AK068467.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156C03, full insert sequence Length = 1788 Score = 97.6 bits (49), Expect = 3e-17 Identities = 64/69 (92%) Strand = Plus / Plus Query: 188 tggcgcgacctcatcgccgaccccgccaaccgcaagaagctcccccaaaccctcgccggc 247 ||||||| ||||||| ||||||||| | |||||||||||||||||||||||||||||||| Sbjct: 221 tggcgcggcctcatctccgaccccgaccaccgcaagaagctcccccaaaccctcgccggc 280 Query: 248 ttcctctac 256 ||| ||||| Sbjct: 281 ttcttctac 289
>dbj|AK108058.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-A07, full insert sequence Length = 1627 Score = 95.6 bits (48), Expect = 1e-16 Identities = 117/140 (83%) Strand = Plus / Plus Query: 111 ccgacgacatcatcctggagatcctctcccgcctcccggtcagatccctccaccgcttca 170 |||||||| ||||| ||||||||||||| || ||||||| || |||| || |||||||| Sbjct: 156 ccgacgacctcatcgtggagatcctctcgcgtctcccggccaaatccgtctgccgcttca 215 Query: 171 agtgcgtctccgtgccatggcgcgacctcatcgccgaccccgccaaccgcaagaagctcc 230 ||||||||||| || |||||| ||||||| || ||| || | ||||||||||||||| Sbjct: 216 agtgcgtctcctggcgctggcgccgcctcatctcccaccgcgaccaccgcaagaagctcc 275 Query: 231 cccaaaccctcgccggcttc 250 |||| | |||||||||||| Sbjct: 276 cccacatgctcgccggcttc 295
>dbj|AK102960.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033115H20, full insert sequence Length = 1499 Score = 67.9 bits (34), Expect = 3e-08 Identities = 34/34 (100%) Strand = Plus / Plus Query: 217 ccgcaagaagctcccccaaaccctcgccggcttc 250 |||||||||||||||||||||||||||||||||| Sbjct: 296 ccgcaagaagctcccccaaaccctcgccggcttc 329 Score = 58.0 bits (29), Expect = 3e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 111 ccgacgacatcatcctggagatcctctcccgcctccc 147 |||||||| ||||| |||||||||||||||||||||| Sbjct: 187 ccgacgacctcatcgtggagatcctctcccgcctccc 223
>ref|NM_185855.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1383 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 188 tggcgcgacctcatcgccgaccccgccaaccgcaagaagctcccccaaaccctcgccggc 247 |||||||||||||||||||||| | | ||||||||||||| || || || || ||||| Sbjct: 397 tggcgcgacctcatcgccgaccatgaccaccgcaagaagctgccgcagacgctgtccggc 456 Query: 248 ttcctctaca 257 ||| |||||| Sbjct: 457 ttcttctaca 466 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 375 tggacgcctgcaatggcctccttctctaccgc 406 ||||| |||||||||||||||| |||| |||| Sbjct: 587 tggactcctgcaatggcctcctcctctgccgc 618
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 188 tggcgcgacctcatcgccgaccccgccaaccgcaagaagctcccccaaaccctcgccggc 247 |||||||||||||||||||||| | | ||||||||||||| || || || || ||||| Sbjct: 20955291 tggcgcgacctcatcgccgaccatgaccaccgcaagaagctgccgcagacgctgtccggc 20955350 Query: 248 ttcctctaca 257 ||| |||||| Sbjct: 20955351 ttcttctaca 20955360 Score = 44.1 bits (22), Expect = 0.39 Identities = 55/66 (83%) Strand = Plus / Plus Query: 163 ccgcttcaagtgcgtctccgtgccatggcgcgacctcatcgccgaccccgccaaccgcaa 222 |||||||||||||||| | | |||||||| | ||||||||||||| || ||||||| Sbjct: 20988400 ccgcttcaagtgcgtcagcaagtcatggcgcaaactcatcgccgaccacgagcaccgcaa 20988459 Query: 223 gaagct 228 |||||| Sbjct: 20988460 gaagct 20988465 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 375 tggacgcctgcaatggcctccttctctaccgc 406 ||||| |||||||||||||||| |||| |||| Sbjct: 20955481 tggactcctgcaatggcctcctcctctgccgc 20955512
>dbj|AP006753.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0039D04 Length = 184408 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 188 tggcgcgacctcatcgccgaccccgccaaccgcaagaagctcccccaaaccctcgccggc 247 |||||||||||||||||||||| | | ||||||||||||| || || || || ||||| Sbjct: 166081 tggcgcgacctcatcgccgaccatgaccaccgcaagaagctgccgcagacgctgtccggc 166140 Query: 248 ttcctctaca 257 ||| |||||| Sbjct: 166141 ttcttctaca 166150 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 375 tggacgcctgcaatggcctccttctctaccgc 406 ||||| |||||||||||||||| |||| |||| Sbjct: 166271 tggactcctgcaatggcctcctcctctgccgc 166302
>dbj|AP003811.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1131_E05 Length = 122216 Score = 52.0 bits (26), Expect = 0.002 Identities = 59/70 (84%) Strand = Plus / Plus Query: 188 tggcgcgacctcatcgccgaccccgccaaccgcaagaagctcccccaaaccctcgccggc 247 |||||||||||||||||||||| | | ||||||||||||| || || || || ||||| Sbjct: 83206 tggcgcgacctcatcgccgaccatgaccaccgcaagaagctgccgcagacgctgtccggc 83265 Query: 248 ttcctctaca 257 ||| |||||| Sbjct: 83266 ttcttctaca 83275 Score = 44.1 bits (22), Expect = 0.39 Identities = 55/66 (83%) Strand = Plus / Plus Query: 163 ccgcttcaagtgcgtctccgtgccatggcgcgacctcatcgccgaccccgccaaccgcaa 222 |||||||||||||||| | | |||||||| | ||||||||||||| || ||||||| Sbjct: 116315 ccgcttcaagtgcgtcagcaagtcatggcgcaaactcatcgccgaccacgagcaccgcaa 116374 Query: 223 gaagct 228 |||||| Sbjct: 116375 gaagct 116380 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 375 tggacgcctgcaatggcctccttctctaccgc 406 ||||| |||||||||||||||| |||| |||| Sbjct: 83396 tggactcctgcaatggcctcctcctctgccgc 83427
>gb|AC079874.21| Oryza sativa chromosome 10 BAC OSJNBa0042H09 genomic sequence, complete sequence Length = 144191 Score = 46.1 bits (23), Expect = 0.100 Identities = 41/47 (87%) Strand = Plus / Minus Query: 163 ccgcttcaagtgcgtctccgtgccatggcgcgacctcatcgccgacc 209 ||||||||||||||||| | | | |||||| ||||||||||||||| Sbjct: 109702 ccgcttcaagtgcgtctgccggtcctggcgcaacctcatcgccgacc 109656 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 375 tggacgcctgcaatggcctccttctctaccgc 406 ||||| |||||||||||||||| |||| |||| Sbjct: 109484 tggactcctgcaatggcctcctcctcttccgc 109453
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.100 Identities = 41/47 (87%) Strand = Plus / Plus Query: 163 ccgcttcaagtgcgtctccgtgccatggcgcgacctcatcgccgacc 209 ||||||||||||||||| | | | |||||| ||||||||||||||| Sbjct: 21500355 ccgcttcaagtgcgtctgccggtcctggcgcaacctcatcgccgacc 21500401 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 375 tggacgcctgcaatggcctccttctctaccgc 406 ||||| |||||||||||||||| |||| |||| Sbjct: 21500573 tggactcctgcaatggcctcctcctcttccgc 21500604 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 tcgcccgcgtccacggcgccgcgg 314 ||||| |||||||||||||||||| Sbjct: 15380081 tcgccggcgtccacggcgccgcgg 15380104
>dbj|AK072706.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023138C05, full insert sequence Length = 2491 Score = 46.1 bits (23), Expect = 0.100 Identities = 41/47 (87%) Strand = Plus / Minus Query: 163 ccgcttcaagtgcgtctccgtgccatggcgcgacctcatcgccgacc 209 ||||||||||||||||| | | | |||||| ||||||||||||||| Sbjct: 2273 ccgcttcaagtgcgtctgccggtcctggcgcaacctcatcgccgacc 2227 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 375 tggacgcctgcaatggcctccttctctaccgc 406 ||||| |||||||||||||||| |||| |||| Sbjct: 2055 tggactcctgcaatggcctcctcctcttccgc 2024
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.100 Identities = 41/47 (87%) Strand = Plus / Plus Query: 163 ccgcttcaagtgcgtctccgtgccatggcgcgacctcatcgccgacc 209 ||||||||||||||||| | | | |||||| ||||||||||||||| Sbjct: 21512018 ccgcttcaagtgcgtctgccggtcctggcgcaacctcatcgccgacc 21512064 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 375 tggacgcctgcaatggcctccttctctaccgc 406 ||||| |||||||||||||||| |||| |||| Sbjct: 21512236 tggactcctgcaatggcctcctcctcttccgc 21512267 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 tcgcccgcgtccacggcgccgcgg 314 ||||| |||||||||||||||||| Sbjct: 15388322 tcgccggcgtccacggcgccgcgg 15388345
>ref|NM_191251.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1335 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 108 tccccgacgacatcatcctggagatcctctcccgcctc 145 ||||||||||| ||||||| | ||||||||||||||| Sbjct: 68 tccccgacgacgtcatcctcgccatcctctcccgcctc 105
>gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosynthetic gene cluster, complete sequence Length = 135638 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 193 cgacctcatcgccgaccccgcc 214 |||||||||||||||||||||| Sbjct: 115356 cgacctcatcgccgaccccgcc 115335
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16 Length = 348642 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 280 ccaccaccacttcgcccgcgtc 301 |||||||||||||||||||||| Sbjct: 29384 ccaccaccacttcgcccgcgtc 29405
>emb|BX640432.1| Bordetella parapertussis strain 12822, complete genome; segment 10/14 Length = 346301 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 280 ccaccaccacttcgcccgcgtc 301 |||||||||||||||||||||| Sbjct: 102762 ccaccaccacttcgcccgcgtc 102783
>emb|BX640415.1| Bordetella pertussis strain Tohama I, complete genome; segment 5/12 Length = 347071 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 280 ccaccaccacttcgcccgcgtc 301 |||||||||||||||||||||| Sbjct: 267349 ccaccaccacttcgcccgcgtc 267328
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 108 tccccgacgacatcatcctggagatcctctcccgcctc 145 ||||||||||| ||||||| | ||||||||||||||| Sbjct: 31544072 tccccgacgacgtcatcctcgccatcctctcccgcctc 31544109
>dbj|AP003249.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0435B05 Length = 150997 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 108 tccccgacgacatcatcctggagatcctctcccgcctc 145 ||||||||||| ||||||| | ||||||||||||||| Sbjct: 57095 tccccgacgacgtcatcctcgccatcctctcccgcctc 57132
>dbj|AP003237.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0046E05 Length = 162776 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 108 tccccgacgacatcatcctggagatcctctcccgcctc 145 ||||||||||| ||||||| | ||||||||||||||| Sbjct: 138136 tccccgacgacgtcatcctcgccatcctctcccgcctc 138173
>dbj|AP003863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1058_A12 Length = 152269 Score = 44.1 bits (22), Expect = 0.39 Identities = 55/66 (83%) Strand = Plus / Plus Query: 163 ccgcttcaagtgcgtctccgtgccatggcgcgacctcatcgccgaccccgccaaccgcaa 222 |||||||||||||||| | | |||||||| | ||||||||||||| || ||||||| Sbjct: 31699 ccgcttcaagtgcgtcagcaagtcatggcgcaaactcatcgccgaccacgagcaccgcaa 31758 Query: 223 gaagct 228 |||||| Sbjct: 31759 gaagct 31764
>dbj|AB113568.1| Actinoplanes sp. A40644 mevalonate pathway genes and BE-40644 biosynthetic genes, complete cds Length = 22478 Score = 44.1 bits (22), Expect = 0.39 Identities = 28/30 (93%) Strand = Plus / Plus Query: 95 gcggccggcctgttccccgacgacatcatc 124 |||||||||||| ||| ||||||||||||| Sbjct: 646 gcggccggcctgatccacgacgacatcatc 675
>dbj|AK063352.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-C02, full insert sequence Length = 1749 Score = 44.1 bits (22), Expect = 0.39 Identities = 34/38 (89%) Strand = Plus / Plus Query: 108 tccccgacgacatcatcctggagatcctctcccgcctc 145 ||||||||||| ||||||| | ||||||||||||||| Sbjct: 262 tccccgacgacgtcatcctcgccatcctctcccgcctc 299
>gb|AC159435.1| Trypanosoma brucei chromosome 8 clone RPCI93-29H22, complete sequence Length = 148464 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 220 caagaagctcccccaaaccctcgcc 244 |||||||| |||||||||||||||| Sbjct: 117366 caagaagcccccccaaaccctcgcc 117342
>gb|CP000071.1| Trypanosoma brucei chromosome 8, complete sequence Length = 2481190 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 220 caagaagctcccccaaaccctcgcc 244 |||||||| |||||||||||||||| Sbjct: 1327589 caagaagcccccccaaaccctcgcc 1327565
>ref|XM_819345.1| Trypanosoma brucei TREU927 clone RPCI93-29H22 hypothetical protein (Tb927.8.4490) partial mRNA Length = 1356 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 220 caagaagctcccccaaaccctcgcc 244 |||||||| |||||||||||||||| Sbjct: 1123 caagaagcccccccaaaccctcgcc 1147
>gb|CP000136.1| Rhizobium etli CFN 42 plasmid p42c, complete sequence Length = 250948 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 6 tcccggccgaggcggtcgagg 26 ||||||||||||||||||||| Sbjct: 68073 tcccggccgaggcggtcgagg 68093
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 278 atccaccaccacttcgcccgcgtcc 302 ||||||||||| ||||||||||||| Sbjct: 733299 atccaccaccagttcgcccgcgtcc 733323
>gb|AF400191.1| Spodoptera frugiperda ribosomal protein L27 mRNA, complete cds Length = 497 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 206 gaccccgccaaccgcaagaagctcc 230 ||||||||||| ||||||||||||| Sbjct: 340 gaccccgccaagcgcaagaagctcc 364
>ref|NM_210265.1| Eremothecium gossypii AER051Cp (AER051C), mRNA Length = 2334 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 278 atccaccaccacttcgcccgcgtcc 302 ||||||||||| ||||||||||||| Sbjct: 828 atccaccaccagttcgcccgcgtcc 804
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 cgacatcatcctggagatcc 134 |||||||||||||||||||| Sbjct: 2977702 cgacatcatcctggagatcc 2977683
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome Length = 2234828 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 cctgcaatggcctccttctc 400 |||||||||||||||||||| Sbjct: 319134 cctgcaatggcctccttctc 319153
>ref|NM_196703.1| Oryza sativa (japonica cultivar-group) putative putative glucosyltransferase (OSJNBa0046P18.12), mRNA Length = 1512 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 291 tcgcccgcgtccacggcgccgcgg 314 ||||| |||||||||||||||||| Sbjct: 1328 tcgccggcgtccacggcgccgcgg 1305
>ref|XM_472012.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 852 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gcccgcgtccacggcgccgc 312 |||||||||||||||||||| Sbjct: 432 gcccgcgtccacggcgccgc 413
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 ccctcgccggcttcctctac 256 |||||||||||||||||||| Sbjct: 62677 ccctcgccggcttcctctac 62696
>gb|AY657572.1| Synthetic construct Peudomonas aeruginosa clone FLH041095.01F PA0832 gene, partial cds Length = 642 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ggccgaggcggtcgaggcgc 29 |||||||||||||||||||| Sbjct: 157 ggccgaggcggtcgaggcgc 138
>gb|BC072657.1| Mus musculus suppressor of Ty 6 homolog (S. cerevisiae), mRNA (cDNA clone MGC:91353 IMAGE:30536338), complete cds Length = 5955 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 cctgcaatggcctccttctc 400 |||||||||||||||||||| Sbjct: 546 cctgcaatggcctccttctc 527
>ref|NM_009297.1| Mus musculus suppressor of Ty 6 homolog (S. cerevisiae) (Supt6h), mRNA Length = 5923 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 cctgcaatggcctccttctc 400 |||||||||||||||||||| Sbjct: 624 cctgcaatggcctccttctc 605
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 actcatcccggccgaggcggtcga 24 ||||||| |||||||||||||||| Sbjct: 206110 actcatcgcggccgaggcggtcga 206133
>ref|XM_990324.1| PREDICTED: Mus musculus suppressor of Ty 6 homolog (S. cerevisiae) (Supt6h), mRNA Length = 3370 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 cctgcaatggcctccttctc 400 |||||||||||||||||||| Sbjct: 1455 cctgcaatggcctccttctc 1436
>ref|XM_751286.1| Ustilago maydis 521 hypothetical protein (UM00232.1) partial mRNA Length = 1134 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 cctcatcgccgaccccgcca 215 |||||||||||||||||||| Sbjct: 1089 cctcatcgccgaccccgcca 1108
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 279 tccaccaccacttcgcccgcgtcc 302 |||||| ||||||||||||||||| Sbjct: 268775 tccacctccacttcgcccgcgtcc 268798
>emb|AL662963.3|OSJN00163 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020I02, complete sequence Length = 172435 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gcccgcgtccacggcgccgc 312 |||||||||||||||||||| Sbjct: 113172 gcccgcgtccacggcgccgc 113191
>emb|AL591070.19| Mouse DNA sequence from clone RP23-185A18 on chromosome 11 Contains the 3' end of a novel gene, Traf4 gene for Tnf receptor associated factor 4, the Nek8 gene for NIMA (never in mitosis gene a)-related expressed kinase 8, six novel genes, the Rpl23a gene for ribosomal protein L23a, the Rab34 gene for RAB34 member of RAS oncogene family, the Supt6h gene for suppressor of Ty 6 homolog (S. cerevisiae), the Sdf2 gene for stromal cell derived factor 2, the Spag5 gene for sperm associated antigen 5, the Aldo3 gene for aldolase 3 C isoform, the Pigs gene for phosphatidylinositol glycan class S and the Unc119 gene for unc-119 homolog (C. elegans), complete sequence Length = 233242 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 cctgcaatggcctccttctc 400 |||||||||||||||||||| Sbjct: 117874 cctgcaatggcctccttctc 117855
>emb|BX005379.9| Zebrafish DNA sequence from clone DKEY-184P9 in linkage group 21, complete sequence Length = 185814 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 cgcatcatccaggtggacgc 381 |||||||||||||||||||| Sbjct: 122550 cgcatcatccaggtggacgc 122569
>gb|AE005999.1| Caulobacter crescentus CB15 section 325 of 359 of the complete genome Length = 12079 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 gcgcgacctcatcgccgacc 209 |||||||||||||||||||| Sbjct: 11369 gcgcgacctcatcgccgacc 11388
>gb|AC150911.4| Pan troglodytes BAC clone CH251-489G13 from chromosome 7, complete sequence Length = 200337 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 cgcctgcaatggcctccttc 398 |||||||||||||||||||| Sbjct: 164880 cgcctgcaatggcctccttc 164899
>gb|AY864912.1| Aedes albopictus V-ATPase subunit A mRNA, complete cds Length = 2971 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 cgacgacatcatcctggaga 131 |||||||||||||||||||| Sbjct: 552 cgacgacatcatcctggaga 571
>dbj|AK136094.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length enriched library, clone:7420455J15 product:suppressor of Ty 6 homolog (S. cerevisiae), full insert sequence Length = 1523 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 cctgcaatggcctccttctc 400 |||||||||||||||||||| Sbjct: 1266 cctgcaatggcctccttctc 1247
>gb|AC017116.7| Homo sapiens BAC clone CTD-2518K21 from 7, complete sequence Length = 86203 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 cgcctgcaatggcctccttc 398 |||||||||||||||||||| Sbjct: 73854 cgcctgcaatggcctccttc 73873
>dbj|AK170533.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630107A01 product:suppressor of Ty 6 homolog (S. cerevisiae), full insert sequence Length = 5103 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 cctgcaatggcctccttctc 400 |||||||||||||||||||| Sbjct: 625 cctgcaatggcctccttctc 606
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gcccgcgtccacggcgccgc 312 |||||||||||||||||||| Sbjct: 16583939 gcccgcgtccacggcgccgc 16583958
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 ctcccggtcagatccctcca 162 |||||||||||||||||||| Sbjct: 7247111 ctcccggtcagatccctcca 7247130
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 108 tccccgacgacatcatcctggagatcctctcccgcctccc 147 |||||| ||||||| ||| || ||||||||||||||||| Sbjct: 16836576 tccccgtcgacatcctccgcgacatcctctcccgcctccc 16836615
>gb|AC087544.2|AC087544 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbxb0046P18, complete sequence Length = 144720 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 tcgcccgcgtccacggcgccgcgg 314 ||||| |||||||||||||||||| Sbjct: 97444 tcgccggcgtccacggcgccgcgg 97467
>gb|AE004518.1| Pseudomonas aeruginosa PAO1, section 79 of 529 of the complete genome Length = 10647 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ggccgaggcggtcgaggcgc 29 |||||||||||||||||||| Sbjct: 1370 ggccgaggcggtcgaggcgc 1351
>ref|XM_239258.3| PREDICTED: Rattus norvegicus suppressor of Ty 6 homolog (S. cerevisiae) (predicted) (Supt6h_predicted), mRNA Length = 5940 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 cctgcaatggcctccttctc 400 |||||||||||||||||||| Sbjct: 620 cctgcaatggcctccttctc 601
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 292 cgcccgcgtccacggcgccg 311 |||||||||||||||||||| Sbjct: 2452878 cgcccgcgtccacggcgccg 2452897
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 103 cctgttccccgacgacatcatcctggag 130 |||| ||||||||||| ||||||||||| Sbjct: 1580631 cctggtccccgacgacctcatcctggag 1580604
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ggccgaggcggtcgaggcgc 29 |||||||||||||||||||| Sbjct: 1143415 ggccgaggcggtcgaggcgc 1143396
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 98 gccggcctgttccccgacga 117 |||||||||||||||||||| Sbjct: 5802380 gccggcctgttccccgacga 5802361
>dbj|AP003521.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0025G03 Length = 139560 Score = 40.1 bits (20), Expect = 6.1 Identities = 35/40 (87%) Strand = Plus / Plus Query: 108 tccccgacgacatcatcctggagatcctctcccgcctccc 147 |||||| ||||||| ||| || ||||||||||||||||| Sbjct: 66734 tccccgtcgacatcctccgcgacatcctctcccgcctccc 66773
>dbj|AP004011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1381_H04 Length = 130961 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 ctcccggtcagatccctcca 162 |||||||||||||||||||| Sbjct: 99216 ctcccggtcagatccctcca 99235
>ref|XM_312919.2| Anopheles gambiae str. PEST ENSANGP00000014717 (ENSANGG00000012228), partial mRNA Length = 1644 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 358 cgagcgcatcatccaggtgg 377 |||||||||||||||||||| Sbjct: 1392 cgagcgcatcatccaggtgg 1411
>dbj|AK103339.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033126A18, full insert sequence Length = 1024 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gcccgcgtccacggcgccgc 312 |||||||||||||||||||| Sbjct: 480 gcccgcgtccacggcgccgc 461
>dbj|AK064399.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-G12, full insert sequence Length = 1717 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 ccctcgccggcttcctctac 256 |||||||||||||||||||| Sbjct: 310 ccctcgccggcttcctctac 329
>dbj|AK061248.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E12, full insert sequence Length = 1063 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gcccgcgtccacggcgccgc 312 |||||||||||||||||||| Sbjct: 524 gcccgcgtccacggcgccgc 505
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 3 tcatcccggccgaggcggtcgaggcgcc 30 ||||||||||||| |||||||| ||||| Sbjct: 1931314 tcatcccggccgacgcggtcgacgcgcc 1931341
>gb|AC004807.1|AC004807 Mus musculus chromosome 11, clone mCIT.268_P_23, complete sequence Length = 110970 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 cctgcaatggcctccttctc 400 |||||||||||||||||||| Sbjct: 50712 cctgcaatggcctccttctc 50731
>emb|AJ748832.1| Streptomyces lividus lividomycin biosynthesis gene cluster Length = 40579 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 catcgccgaccccgccaacc 218 |||||||||||||||||||| Sbjct: 35707 catcgccgaccccgccaacc 35726
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 103 cctgttccccgacgacatcatcctggag 130 |||| ||||||||||| ||||||||||| Sbjct: 1256500 cctggtccccgacgacctcatcctggag 1256473
>gb|U40375.1|MMU40375 Mus musculus Supt6h mRNA, complete cds Length = 5923 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 cctgcaatggcctccttctc 400 |||||||||||||||||||| Sbjct: 624 cctgcaatggcctccttctc 605 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,471,913 Number of Sequences: 3902068 Number of extensions: 3471913 Number of successful extensions: 66469 Number of sequences better than 10.0: 77 Number of HSP's better than 10.0 without gapping: 78 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 65118 Number of HSP's gapped (non-prelim): 1345 length of query: 456 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 434 effective length of database: 17,147,199,772 effective search space: 7441884701048 effective search space used: 7441884701048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)