Clone Information

BLAST Search Result

Clone Name	bast75f09
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ZRF1_HUMAN (Q99543) Zuotin-related factor 1 (M-phase phosphoprot...	48	1e-05
2	DNJC1_MOUSE (Q61712) DnaJ homolog subfamily C member 1 (DnaJ pro...	39	0.005
3	YMA9_CAEEL (P34454) Hypothetical protein F54F2.9	39	0.005
4	DNJC1_HUMAN (Q96KC8) DnaJ homolog subfamily C member 1	35	0.099
5	MYBA_CHICK (P52550) Myb-related protein A (A-Myb)	34	0.17
6	CEF1_ASHGO (Q756C3) Pre-mRNA-splicing factor CEF1	33	0.29
7	GCSP_TROWT (Q83GV1) Glycine dehydrogenase [decarboxylating] (EC ...	33	0.29
8	GCSP_TROW8 (Q83IA7) Glycine dehydrogenase [decarboxylating] (EC ...	33	0.29
9	MYBA_HUMAN (P10243) Myb-related protein A (A-Myb)	33	0.49
10	MYBA_MOUSE (P51960) Myb-related protein A (A-Myb)	33	0.49
11	MYB_AVIMB (P01104) Transforming protein Myb	33	0.49
12	CEF1_CANAL (Q5APG6) Pre-mRNA-splicing factor CEF1	33	0.49
13	ODO1_PETHY (Q50EX6) ODORANT1 protein (MYB-like protein ODO1)	32	0.64
14	MYBA_XENLA (Q05935) Myb-related protein A (A-Myb) (XAMYB) (MYB-r...	32	0.64
15	SAHH_COREF (Q8FRJ4) Adenosylhomocysteinase (EC 3.3.1.1) (S-adeno...	32	0.83
16	CEF1_DEBHA (Q6BLT3) Pre-mRNA-splicing factor CEF1	31	1.4
17	MYB_XENLA (Q08759) Myb protein	31	1.9
18	MYB_CHICK (P01103) Myb proto-oncogene protein (C-myb)	31	1.9
19	MYB_HUMAN (P10242) Myb proto-oncogene protein (C-myb)	31	1.9
20	MYB_BOVIN (P46200) Myb proto-oncogene protein (C-myb)	31	1.9
21	HGFA_CANFA (Q6QNF4) Hepatocyte growth factor activator precursor...	31	1.9
22	MYB_MOUSE (P06876) Myb proto-oncogene protein (C-myb)	31	1.9
23	CEF1_SCHPO (P39964) Pre-mRNA-splicing factor cef1 (Cell division...	30	2.4
24	CEF1_YEAST (Q03654) Pre-mRNA-splicing factor CEF1 (PRP19-associa...	30	3.2
25	SC5A2_RABIT (P26430) Sodium/nucleoside cotransporter (Na(+)/nucl...	30	4.1
26	CEF1_KLULA (Q6CU65) Pre-mRNA-splicing factor CEF1	30	4.1
27	MYBA2_ORYSA (Q4JL76) Myb-related protein MYBAS2	30	4.1
28	MYB2_PHYPA (P80073) Myb-related protein Pp2	30	4.1
29	CEF1_YARLI (Q6C8F5) Pre-mRNA-splicing factor CEF1	30	4.1
30	AGLU_ASPOR (Q12558) Alpha-glucosidase precursor (EC 3.2.1.20) (M...	29	7.1
31	MYBB_CHICK (Q03237) Myb-related protein B (B-Myb)	29	7.1
32	MYBA1_ORYSA (Q53NK6) Myb-related protein MYBAS1	29	7.1
33	TPS3_YEAST (P38426) Trehalose synthase complex regulatory subuni...	28	9.2
34	SYC2_MYCLE (Q49784) Putative cysteinyl-tRNA synthetase 2 (EC 6.1...	28	9.2
35	MTA1_RAT (Q62599) Metastasis-associated protein MTA1	28	9.2
36	CEF1_EMENI (Q5AW35) Pre-mRNA-splicing factor cef1	28	9.2
37	RIMB1_RAT (Q9JIR0) Peripheral-type benzodiazepine receptor-assoc...	28	9.2
38	MTA1_MOUSE (Q8K4B0) Metastasis-associated protein MTA1	28	9.2
39	MTA1_HUMAN (Q13330) Metastasis-associated protein MTA1	28	9.2
40	CEF1_ASPFU (Q4WHG0) Pre-mRNA-splicing factor cef1	28	9.2

>ZRF1_HUMAN (Q99543) Zuotin-related factor 1 (M-phase phosphoprotein 11)|
          Length = 568

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 19/46 (41%), Positives = 28/46 (60%)
 Frame = +3

Query: 93  WSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYDDL 230
           W+  E KL E+AL     + P+RWE++A  +PG+T  D M  Y +L
Sbjct: 501 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKEL 546

to top

>DNJC1_MOUSE (Q61712) DnaJ homolog subfamily C member 1 (DnaJ protein homolog|
           MTJ1)
          Length = 552

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 16/44 (36%), Positives = 26/44 (59%)
 Frame = +3

Query: 90  AWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHY 221
           AW+ ++ KL E AL +    A DRW+++A  +P K+  D +  Y
Sbjct: 494 AWTQSQQKLLELALQQYPKGASDRWDKIAKCVPSKSKEDCIARY 537

to top

>YMA9_CAEEL (P34454) Hypothetical protein F54F2.9|
          Length = 299

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +3

Query: 93  WSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYDDL 230
           WS AE K FE AL +      +RWER++  +  KT   VM  +  L
Sbjct: 242 WSQAEQKAFETALQKYPKGTDERWERISEEIGSKTKKQVMVRFKQL 287

to top

>DNJC1_HUMAN (Q96KC8) DnaJ homolog subfamily C member 1|
          Length = 554

 Score = 35.0 bits (79), Expect = 0.099
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +3

Query: 93  WSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHY 221
           W+  + KL E AL +    + DRW+++A  +P K+  D +  Y
Sbjct: 497 WTQNQQKLLELALQQYPRGSSDRWDKIARCVPSKSKEDCIARY 539

to top

>MYBA_CHICK (P52550) Myb-related protein A (A-Myb)|
          Length = 757

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 15/45 (33%), Positives = 27/45 (60%)
 Frame = +3

Query: 90  AWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYD 224
           +W+ AE+++  EA  R+     +RW  +A LLPG+T   +  H++
Sbjct: 141 SWTEAEDRVIYEAHKRLG----NRWAEIAKLLPGRTDNSIKNHWN 181

to top

>CEF1_ASHGO (Q756C3) Pre-mRNA-splicing factor CEF1|
          Length = 477

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = +3

Query: 81  RGGAWSPAENKLFEEALARVDCDAPDRWERVASLLPGKT 197
           +GG WS  E+++   A+ R    A   W +VASLLP K+
Sbjct: 9   KGGVWSTVEDEILRAAVQRYGTHA---WNKVASLLPRKS 44

to top

>GCSP_TROWT (Q83GV1) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)|
           (Glycine decarboxylase) (Glycine cleavage system
           P-protein)
          Length = 968

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
 Frame = +3

Query: 93  WSPAENKL---FEEALARVDCDAPDRWERVASLLPGKTVADVMTHYDDLE 233
           W   +NKL   F+E  AR+D D P+R  +V  + P K + D+  +YD  +
Sbjct: 396 WKVDDNKLRITFDEVTARLDGDLPERLSKVFGISPDK-IRDLGCNYDSCD 444

to top

>GCSP_TROW8 (Q83IA7) Glycine dehydrogenase [decarboxylating] (EC 1.4.4.2)|
           (Glycine decarboxylase) (Glycine cleavage system
           P-protein)
          Length = 968

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
 Frame = +3

Query: 93  WSPAENKL---FEEALARVDCDAPDRWERVASLLPGKTVADVMTHYDDLE 233
           W   +NKL   F+E  AR+D D P+R  +V  + P K + D+  +YD  +
Sbjct: 396 WKVDDNKLRITFDEVTARLDGDLPERLSKVFGISPDK-IRDLGCNYDSCD 444

to top

>MYBA_HUMAN (P10243) Myb-related protein A (A-Myb)|
          Length = 752

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +3

Query: 90  AWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYD 224
           +W+  E+++  EA  R+     +RW  +A LLPG+T   +  H++
Sbjct: 141 SWTEEEDRIIYEAHKRLG----NRWAEIAKLLPGRTDNSIKNHWN 181

to top

>MYBA_MOUSE (P51960) Myb-related protein A (A-Myb)|
          Length = 751

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 14/45 (31%), Positives = 26/45 (57%)
 Frame = +3

Query: 90  AWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYD 224
           +W+  E+++  EA  R+     +RW  +A LLPG+T   +  H++
Sbjct: 141 SWTEEEDRIIYEAHKRLG----NRWAEIAKLLPGRTDNSIKNHWN 181

to top

>MYB_AVIMB (P01104) Transforming protein Myb|
          Length = 382

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 19/73 (26%), Positives = 36/73 (49%)
 Frame = +3

Query: 90  AWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYDDLENDVCFIEAGLVP 269
           +W+  E+++  +A  R+     +RW  +A LLPG+T   V  H+    N     +     
Sbjct: 75  SWTEEEDRIIYQAHKRLG----NRWAEIAKLLPGRTDNAVKNHW----NSTMRRKVEQEG 126

Query: 270 FPHYNANAGSPAS 308
           +P  ++ AG P++
Sbjct: 127 YPQESSKAGPPSA 139

to top

>CEF1_CANAL (Q5APG6) Pre-mRNA-splicing factor CEF1|
          Length = 610

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 14/47 (29%), Positives = 27/47 (57%)
 Frame = +3

Query: 81  RGGAWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHY 221
           +GG W+  E+++ + A+ +       +WER++SLLP K+   V   +
Sbjct: 8   KGGVWTNVEDEILKAAIQKYGIY---QWERISSLLPKKSAKQVKARW 51

to top

>ODO1_PETHY (Q50EX6) ODORANT1 protein (MYB-like protein ODO1)|
          Length = 294

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 16/50 (32%), Positives = 29/50 (58%)
 Frame = +3

Query: 75  DQRGGAWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYD 224
           D + G  S AE KL  +  +R+     +RW ++A+ LPG+T  ++  H++
Sbjct: 64  DLKRGLLSDAEEKLVIDLHSRLG----NRWSKIAARLPGRTDNEIKNHWN 109

to top

>MYBA_XENLA (Q05935) Myb-related protein A (A-Myb) (XAMYB) (MYB-related protein|
           2) (XMYB2)
          Length = 728

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 14/50 (28%), Positives = 27/50 (54%)
 Frame = +3

Query: 75  DQRGGAWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYD 224
           D +  +W+  E+++   A  R+     +RW  +A LLPG+T   +  H++
Sbjct: 135 DVKKSSWTEEEDRIIYSAHKRMG----NRWAEIAKLLPGRTDNSIKNHWN 180

to top

>SAHH_COREF (Q8FRJ4) Adenosylhomocysteinase (EC 3.3.1.1)|
           (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase)
          Length = 478

 Score = 32.0 bits (71), Expect = 0.83
 Identities = 21/62 (33%), Positives = 29/62 (46%)
 Frame = +3

Query: 129 LARVDCDAPDRWERVASLLPGKTVADVMTHYDDLENDVCFIEAGLVPFPHYNANAGSPAS 308
           L  V  + PD+W R+A  + G T  +  T    L +   F E G++PFP  N N     S
Sbjct: 177 LREVLAEEPDKWTRLADSIKGVT-EETTTGVHRLYH---FAEEGVLPFPAMNVNDAVTKS 232

Query: 309 GF 314
            F
Sbjct: 233 KF 234

to top

>CEF1_DEBHA (Q6BLT3) Pre-mRNA-splicing factor CEF1|
          Length = 668

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 14/52 (26%), Positives = 29/52 (55%)
 Frame = +3

Query: 81  RGGAWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYDDLEN 236
           +GG W+  E+++ + A+++   +   +W RVASLL  K+       +++  N
Sbjct: 7   KGGVWTNVEDEILKAAVSKYGLN---QWSRVASLLAKKSAKQAKARWNEWLN 55

to top

>MYB_XENLA (Q08759) Myb protein|
          Length = 624

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +3

Query: 90  AWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYD 224
           +W+  E++   EA  R+     +RW  +A LLPG+T   +  H++
Sbjct: 143 SWTEEEDRTIYEAHKRLG----NRWAEIAKLLPGRTDNAIKNHWN 183

to top

>MYB_CHICK (P01103) Myb proto-oncogene protein (C-myb)|
          Length = 641

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 13/45 (28%), Positives = 26/45 (57%)
 Frame = +3

Query: 90  AWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYD 224
           +W+  E+++  +A  R+     +RW  +A LLPG+T   +  H++
Sbjct: 146 SWTEEEDRIIYQAHKRLG----NRWAEIAKLLPGRTDNAIKNHWN 186

to top

>MYB_HUMAN (P10242) Myb proto-oncogene protein (C-myb)|
          Length = 640

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 13/45 (28%), Positives = 26/45 (57%)
 Frame = +3

Query: 90  AWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYD 224
           +W+  E+++  +A  R+     +RW  +A LLPG+T   +  H++
Sbjct: 146 SWTEEEDRIIYQAHKRLG----NRWAEIAKLLPGRTDNAIKNHWN 186

to top

>MYB_BOVIN (P46200) Myb proto-oncogene protein (C-myb)|
          Length = 640

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 13/45 (28%), Positives = 26/45 (57%)
 Frame = +3

Query: 90  AWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYD 224
           +W+  E+++  +A  R+     +RW  +A LLPG+T   +  H++
Sbjct: 146 SWTEEEDRIIYQAHKRLG----NRWAEIAKLLPGRTDNAIKNHWN 186

to top

>HGFA_CANFA (Q6QNF4) Hepatocyte growth factor activator precursor (EC 3.4.21.-)|
           (HGF activator) (HGFA) [Contains: Hepatocyte growth
           factor activator short chain; Hepatocyte growth factor
           activator long chain]
          Length = 654

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
 Frame = +3

Query: 18  LPVPPAPYFAG---QAGGWFLQDQRGGAWSPAENKLFEEALARVDCDAPDRWERVASLLP 188
           LP P +P+ AG   Q  GW  QD+    +S +  +     +A   C +P+ +   A + P
Sbjct: 521 LPEPSSPFPAGHKCQIAGWGHQDENVSGYSSSLREALVPLVADHKCSSPEVYG--ADISP 578

Query: 189 GKTVADVMTHYDDLENDVCFIEAG 260
               A     Y D ++D C  ++G
Sbjct: 579 NMLCAG----YFDCKSDACQGDSG 598

to top

>MYB_MOUSE (P06876) Myb proto-oncogene protein (C-myb)|
          Length = 636

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 13/45 (28%), Positives = 26/45 (57%)
 Frame = +3

Query: 90  AWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYD 224
           +W+  E+++  +A  R+     +RW  +A LLPG+T   +  H++
Sbjct: 146 SWTEEEDRIIYQAHKRLG----NRWAEIAKLLPGRTDNAIKNHWN 186

to top

>CEF1_SCHPO (P39964) Pre-mRNA-splicing factor cef1 (Cell division control|
           protein 5)
          Length = 757

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 13/39 (33%), Positives = 25/39 (64%)
 Frame = +3

Query: 81  RGGAWSPAENKLFEEALARVDCDAPDRWERVASLLPGKT 197
           +GGAW   E+++ + A+++      ++W R++SLL  KT
Sbjct: 5   KGGAWKNTEDEILKAAVSKY---GKNQWARISSLLVRKT 40

to top

>CEF1_YEAST (Q03654) Pre-mRNA-splicing factor CEF1 (PRP19-associated complex|
           protein 85) (PRP nineteen-associated complex protein 85)
          Length = 590

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 17/71 (23%), Positives = 32/71 (45%)
 Frame = +3

Query: 24  VPPAPYFAGQAGGWFLQDQRGGAWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVA 203
           +PP P +            +GG W+  E+++ + A+ +       +W +VASLL  KT  
Sbjct: 1   MPPVPIYV-----------KGGVWTNVEDQILKAAVQKY---GTHQWSKVASLLQKKTAR 46

Query: 204 DVMTHYDDLEN 236
                +++  N
Sbjct: 47  QSELRWNEYLN 57

to top

>SC5A2_RABIT (P26430) Sodium/nucleoside cotransporter (Na(+)/nucleoside|
           cotransporter)
          Length = 672

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 3/57 (5%)
 Frame = +3

Query: 21  PVPPAPYFAGQAGGWFLQDQRGGAWSPAENKLFEEALAR---VDCDAPDRWERVASL 182
           P  P P    Q   WF    RG A  PA     EEA A     D +   RW RV +L
Sbjct: 599 PQAPGPGLFRQCLLWFCGMNRGRAGGPAPPTQEEEAAAARRLEDINEDPRWSRVVNL 655

to top

>CEF1_KLULA (Q6CU65) Pre-mRNA-splicing factor CEF1|
          Length = 543

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 14/52 (26%), Positives = 27/52 (51%)
 Frame = +3

Query: 81  RGGAWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYDDLEN 236
           +GG W+  E+++ + A+ +    A   W +VASLL  K      + +++  N
Sbjct: 9   KGGIWTNLEDQILKAAVQKYGTHA---WSKVASLLQKKNARQCQSRWNEFLN 57

to top

>MYBA2_ORYSA (Q4JL76) Myb-related protein MYBAS2|
          Length = 242

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = +3

Query: 87  GAWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHY 221
           G  SP E +L  E  AR      +RW R+A  LPG+T  ++  ++
Sbjct: 64  GRMSPHEERLILELHARWG----NRWSRIARRLPGRTDNEIKNYW 104

to top

>MYB2_PHYPA (P80073) Myb-related protein Pp2|
          Length = 421

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 15/50 (30%), Positives = 28/50 (56%)
 Frame = +3

Query: 75  DQRGGAWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYD 224
           D + G +S AE  L  +  A +     +RW R+A+ LPG+T  ++  +++
Sbjct: 64  DLKRGIFSEAEENLILDLHATLG----NRWSRIAAQLPGRTDNEIKNYWN 109

to top

>CEF1_YARLI (Q6C8F5) Pre-mRNA-splicing factor CEF1|
          Length = 719

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +3

Query: 81  RGGAWSPAENKLFEEALARVDCDAPDRWERVASLLPGKT 197
           +GG W+  E+++   A+++   +   +W RV+SLL  KT
Sbjct: 5   KGGVWTNVEDEILRAAISKYGLN---QWARVSSLLARKT 40

to top

>AGLU_ASPOR (Q12558) Alpha-glucosidase precursor (EC 3.2.1.20) (Maltase) (AGL)|
          Length = 985

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 15/49 (30%), Positives = 21/49 (42%)
 Frame = +3

Query: 207 VMTHYDDLENDVCFIEAGLVPFPHYNANAGSPASGFTLDWDDGGDLAFK 353
           V T++D        +   LVP P  + NA  P S F + W +     FK
Sbjct: 118 VPTYFDASNASWYILSEELVPRPKASQNASVPQSDFVVSWSNEPSFNFK 166

to top

>MYBB_CHICK (Q03237) Myb-related protein B (B-Myb)|
          Length = 686

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 14/45 (31%), Positives = 25/45 (55%)
 Frame = +3

Query: 90  AWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHYD 224
           +W+  E+++  EA   +     +RW  +A LLPG+T   V  H++
Sbjct: 137 SWTEEEDRIIFEAHKVLG----NRWAEIAKLLPGRTDNAVKNHWN 177

to top

>MYBA1_ORYSA (Q53NK6) Myb-related protein MYBAS1|
          Length = 237

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +3

Query: 87  GAWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHY 221
           G  SP E  L  E  AR      +RW R+A  LPG+T  ++  ++
Sbjct: 64  GRMSPKEEHLIIELHARWG----NRWSRIARRLPGRTDNEIKNYW 104

to top

>TPS3_YEAST (P38426) Trehalose synthase complex regulatory subunit TPS3|
           (Alpha,alpha-trehalose-phosphate synthase [UDP-forming]
           115 kDa subunit)
          Length = 1054

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
 Frame = +3

Query: 111 KLFEEALARVDCD----APDRWERVASLLPGKTVADVMTHYDDLENDVCFIEAGLVPFPH 278
           KL E ++ +VDC+    + ++ ER +S      V    +HY  L       EA +   P 
Sbjct: 27  KLVESSMIKVDCNNQELSNNKQERSSS------VTSASSHYIGLPQ-----EAQINGEPL 75

Query: 279 YNANAGSPASG 311
             AN GSPA+G
Sbjct: 76  QRANVGSPATG 86

to top

>SYC2_MYCLE (Q49784) Putative cysteinyl-tRNA synthetase 2 (EC 6.1.1.16)|
           (Cysteine--tRNA ligase 2) (CysRS 2)
          Length = 412

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
 Frame = +3

Query: 27  PPAPYFAGQAGGWFLQDQRGGAWSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVAD 206
           PP+    G   G +  D+    WS   ++L ++A+AR+      RW   AS+  G  VAD
Sbjct: 309 PPSAIRLGLLAGHYRADR---FWS---SQLLDDAIARLH-----RWRTAASMPAGPDVAD 357

Query: 207 VMTHY-----DDLE 233
           V+        DDL+
Sbjct: 358 VIARVRGYLADDLD 371

to top

>MTA1_RAT (Q62599) Metastasis-associated protein MTA1|
          Length = 703

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +3

Query: 93  WSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHY 221
           WS +E  LFEEAL +   D  D  +     LP K++  ++ +Y
Sbjct: 288 WSASEANLFEEALEKYGKDFTDIQQ---DFLPWKSLTSIIEYY 327

to top

>CEF1_EMENI (Q5AW35) Pre-mRNA-splicing factor cef1|
          Length = 791

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +3

Query: 81  RGGAWSPAENKLFEEALARVDCDAPDRWERVASLLPGKT 197
           +GG W+  E+++   A+++   +   +W RV+SLL  KT
Sbjct: 5   KGGVWTNIEDEVLRAAVSKYGLN---QWARVSSLLARKT 40

to top

>RIMB1_RAT (Q9JIR0) Peripheral-type benzodiazepine receptor-associated protein|
           1 (PRAX-1) (RIM-binding protein 1) (RIM-BP1)
          Length = 1847

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 18/39 (46%), Positives = 20/39 (51%)
 Frame = -1

Query: 337 PPSSQSRVNPEAGEPALAL*WGKGTRPASMKHTSFSRSS 221
           PP S  R  P++ EPALA   G   R A  K  S S SS
Sbjct: 568 PPGSPGRCTPKSSEPALATLTGVPRRTAK-KAESLSNSS 605

to top

>MTA1_MOUSE (Q8K4B0) Metastasis-associated protein MTA1|
          Length = 715

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +3

Query: 93  WSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHY 221
           WS +E  LFEEAL +   D  D  +     LP K++  ++ +Y
Sbjct: 288 WSASEANLFEEALEKYGKDFTDIQQ---DFLPWKSLTSIIEYY 327

to top

>MTA1_HUMAN (Q13330) Metastasis-associated protein MTA1|
          Length = 715

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +3

Query: 93  WSPAENKLFEEALARVDCDAPDRWERVASLLPGKTVADVMTHY 221
           WS +E  LFEEAL +   D  D  +     LP K++  ++ +Y
Sbjct: 288 WSASEANLFEEALEKYGKDFTDIQQ---DFLPWKSLTSIIEYY 327

to top

>CEF1_ASPFU (Q4WHG0) Pre-mRNA-splicing factor cef1|
          Length = 792

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 13/39 (33%), Positives = 24/39 (61%)
 Frame = +3

Query: 81  RGGAWSPAENKLFEEALARVDCDAPDRWERVASLLPGKT 197
           +GG W+  E+++   A+++   +   +W RV+SLL  KT
Sbjct: 5   KGGVWTNIEDEVLRAAVSKYGLN---QWARVSSLLARKT 40


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,250,847
Number of Sequences: 219361
Number of extensions: 621856
Number of successful extensions: 1937
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1933
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result