ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | bast75f06 |
|---|---|
| Clone Library Name | barley_pub |
>IE18_PRVKA (P33479) Immediate-early protein IE180| Length = 1446 Score = 33.9 bits (76), Expect = 0.21 Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 1/41 (2%) Frame = +2 Query: 44 QAQRENRRPRPGQPL-PIPDPAPSLLHGSSASPRPIRLRNP 163 + R RR R L P PDPAP+LL SS+S RLR P Sbjct: 921 EEDRGPRRKRRSLGLGPAPDPAPALLSSSSSSSEDDRLRRP 961
>SPI1_MOUSE (P17433) Transcription factor PU.1 (31 kDa transforming protein)| (SFFV proviral integration 1 protein) Length = 272 Score = 32.3 bits (72), Expect = 0.62 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 7/46 (15%) Frame = +2 Query: 38 HRQAQRENRRPRPGQPLPIPD-------PAPSLLHGSSASPRPIRL 154 H+Q+ E R PL + D P P LLHG + S + IRL Sbjct: 129 HQQSSDEEEGERQSPPLEVSDGEADGLEPGPGLLHGETGSKKKIRL 174
>ZSWM5_HUMAN (Q9P217) Zinc finger SWIM domain-containing protein 5| Length = 1185 Score = 32.3 bits (72), Expect = 0.62 Identities = 23/67 (34%), Positives = 26/67 (38%) Frame = -3 Query: 437 PLRRRGPCSSYSSPWRGRPGSRKPESRNGRESQQEGTSGAAQAAAQRESVRGQDTAHAEH 258 P R C S +RG PG+ G +EG AAA S G A A Sbjct: 103 PRNEREICMYSSFQYRGGPGAGAAGGAAGASPAEEGPQPPPGAAAPAGSAPGGVAAGASP 162 Query: 257 QSGAGAG 237 GAGAG Sbjct: 163 GLGAGAG 169
>KCNN3_PIG (P58392) Small conductance calcium-activated potassium channel| protein 3 (SK3) Length = 724 Score = 32.3 bits (72), Expect = 0.62 Identities = 13/41 (31%), Positives = 23/41 (56%) Frame = +2 Query: 50 QRENRRPRPGQPLPIPDPAPSLLHGSSASPRPIRLRNPQEQ 172 +++ ++P P P P P AP G P+P++L+ Q+Q Sbjct: 29 EQQQQQPPPPPPPPAPPAAPQQPPGPPLQPQPLQLQQQQQQ 69
>SPI1_RAT (Q6BDS1) Transcription factor PU.1| Length = 271 Score = 32.3 bits (72), Expect = 0.62 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 7/46 (15%) Frame = +2 Query: 38 HRQAQRENRRPRPGQPLPIPD-------PAPSLLHGSSASPRPIRL 154 H+Q+ E R PL + D P P LLHG + S + IRL Sbjct: 128 HQQSSDEEEGERQSPPLEVSDGEADGLEPGPGLLHGETGSKKKIRL 173
>ADRB1_RAT (P18090) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1| adrenoreceptor) Length = 466 Score = 32.0 bits (71), Expect = 0.81 Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 5/40 (12%) Frame = +2 Query: 68 PRPGQPLPIPDPAP-----SLLHGSSASPRPIRLRNPQEQ 172 PRP P P P P P SL +G S+ RP RL +EQ Sbjct: 270 PRPPSPAPSPSPGPPRPADSLANGRSSKRRPSRLVALREQ 309
>ZMY15_HUMAN (Q9H091) Zinc finger MYND domain-containing protein 15| Length = 703 Score = 32.0 bits (71), Expect = 0.81 Identities = 17/46 (36%), Positives = 22/46 (47%) Frame = +2 Query: 38 HRQAQRENRRPRPGQPLPIPDPAPSLLHGSSASPRPIRLRNPQEQP 175 ++ AQ RP PG P P P P SA P P R R +++P Sbjct: 658 YKPAQGSGARPAPGPPPPSPTP--------SAPPAPTRRRRGEKKP 695
>HSF4_HUMAN (Q9ULV5) Heat shock factor protein 4 (HSF 4) (Heat shock| transcription factor 4) (HSTF 4) (hHSF4) Length = 493 Score = 32.0 bits (71), Expect = 0.81 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 4/46 (8%) Frame = +2 Query: 44 QAQRENRRPRPGQPLPIPDPAPSLLHGSSASPR----PIRLRNPQE 169 + R ++P PG P IPD P L SP P+ L+ PQE Sbjct: 343 EGPRNAQQPEPGDPREIPDRGPLGLESGDRSPESLLPPMLLQPPQE 388
>U2AF1_DROME (Q94535) Splicing factor U2af 38 kDa subunit (U2 auxiliary factor| 38 kDa subunit) (U2 snRNP auxiliary factor small subunit) Length = 264 Score = 31.2 bits (69), Expect = 1.4 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 4/70 (5%) Frame = -3 Query: 431 RRRGPCSSYSSPWR---GRPGSRKPESRNGRESQQEGTSGAAQAAAQRESVRGQDTAH-A 264 RRR S SP R R SR P R G + +G G +R+++RG D + Sbjct: 190 RRRRARSRSRSPGRRRGSRSRSRSPGRRGG--GRGDGVGGGNYLNNERDNMRGNDRGNDR 247 Query: 263 EHQSGAGAGG 234 + + G G GG Sbjct: 248 DRRKGGGGGG 257
>MOT8_MOUSE (O70324) Monocarboxylate transporter 8 (MCT 8) (X-linked| PEST-containing transporter) Length = 565 Score = 31.2 bits (69), Expect = 1.4 Identities = 16/37 (43%), Positives = 20/37 (54%) Frame = +2 Query: 65 RPRPGQPLPIPDPAPSLLHGSSASPRPIRLRNPQEQP 175 +P P +P P+PDPAP G A P P L +P P Sbjct: 56 QPEP-EPQPLPDPAPLPELGFEAEPEPQPLPDPAPLP 91
>HORN_HUMAN (Q86YZ3) Hornerin| Length = 2850 Score = 31.2 bits (69), Expect = 1.4 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = -3 Query: 428 RRGPCSSYSSPWRGRPGSRKPESRNGRESQQEGTSGAAQAAAQRESVRGQDTAHAEHQSG 249 R+G S +S P RGR GS S + Q SG + + ES G + +H+SG Sbjct: 2174 RQGSGSGHS-PSRGRHGSGSGHSSS--HGQHGSGSGRSSSRGPYESRSGHSSVFGQHESG 2230 Query: 248 AG 243 +G Sbjct: 2231 SG 2232 Score = 30.4 bits (67), Expect = 2.3 Identities = 21/62 (33%), Positives = 30/62 (48%) Frame = -3 Query: 428 RRGPCSSYSSPWRGRPGSRKPESRNGRESQQEGTSGAAQAAAQRESVRGQDTAHAEHQSG 249 R+G S +S P RGR GS S + Q SG + + ES G + +H+SG Sbjct: 1234 RQGSGSGHS-PSRGRHGSGLGHSSS--HGQHGSGSGRSSSRGPYESRSGHSSVFGQHESG 1290 Query: 248 AG 243 +G Sbjct: 1291 SG 1292 Score = 30.0 bits (66), Expect = 3.1 Identities = 19/56 (33%), Positives = 26/56 (46%) Frame = -3 Query: 410 SYSSPWRGRPGSRKPESRNGRESQQEGTSGAAQAAAQRESVRGQDTAHAEHQSGAG 243 S SP RGR GS S + Q SG + + ES G + +H+SG+G Sbjct: 1709 SGQSPSRGRHGSGLGHSSS--HGQHGSGSGRSSSRGPYESRSGHSSVFGQHESGSG 1762 Score = 29.6 bits (65), Expect = 4.0 Identities = 19/56 (33%), Positives = 26/56 (46%) Frame = -3 Query: 410 SYSSPWRGRPGSRKPESRNGRESQQEGTSGAAQAAAQRESVRGQDTAHAEHQSGAG 243 S SP RGR GS S + Q SG + + ES G + +H+SG+G Sbjct: 2649 SGQSPSRGRHGSGLGHSSS--HGQHGSGSGRSSSRGPYESRLGHSSVFGQHESGSG 2702 Score = 28.9 bits (63), Expect = 6.8 Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 14/71 (19%) Frame = -3 Query: 416 CSSYSSPWRGRPGSRKPESRNGRESQQEG--------------TSGAAQAAAQRESVRGQ 279 C Y S G + ES +G+ Q G TSG + ++ Q +S GQ Sbjct: 804 CGHYESGSGQASGFGQHESGSGQGYSQHGSASGHFSSQGRHGSTSGQSSSSGQHDSSSGQ 863 Query: 278 DTAHAEHQSGA 246 +++ +H+S + Sbjct: 864 SSSYGQHESAS 874 Score = 28.9 bits (63), Expect = 6.8 Identities = 20/64 (31%), Positives = 30/64 (46%) Frame = -3 Query: 428 RRGPCSSYSSPWRGRPGSRKPESRNGRESQQEGTSGAAQAAAQRESVRGQDTAHAEHQSG 249 R+G S +S P R R GS S + Q + + + ES GQ + +H+SG Sbjct: 767 RQGSGSGHS-PSRVRHGSSSGHSSS--HGQHGSGTSCSSSCGHYESGSGQASGFGQHESG 823 Query: 248 AGAG 237 +G G Sbjct: 824 SGQG 827
>GP156_HUMAN (Q8NFN8) Probable G-protein coupled receptor 156 (GABAB-related| G-protein coupled receptor) (G-protein coupled receptor PGR28) Length = 814 Score = 30.8 bits (68), Expect = 1.8 Identities = 15/48 (31%), Positives = 22/48 (45%) Frame = -3 Query: 386 RPGSRKPESRNGRESQQEGTSGAAQAAAQRESVRGQDTAHAEHQSGAG 243 RP SRKP + + + G+ Q+ + E RG A SG+G Sbjct: 656 RPSSRKPSLPSDPQDRPGTLEGSKQSQTEPEGARGSKAAFLRQPSGSG 703
>BCTN7_BOVIN (P19661) Bactenecin-7 precursor (Bac7) (Cathelicidin-3) (PR-59)| Length = 190 Score = 30.8 bits (68), Expect = 1.8 Identities = 16/36 (44%), Positives = 18/36 (50%) Frame = +2 Query: 68 PRPGQPLPIPDPAPSLLHGSSASPRPIRLRNPQEQP 175 PRPG P PIP P P G PRP+ P +P Sbjct: 151 PRPG-PRPIPRPLPFPRPGPRPIPRPLPFPRPGPRP 185
>RUNX1_HUMAN (Q01196) Runt-related transcription factor 1 (Core-binding factor,| alpha 2 subunit) (CBF-alpha 2) (Acute myeloid leukemia 1 protein) (Oncogene AML-1) (Polyomavirus enhancer-binding protein 2 alpha B subunit) (PEBP2-alpha B) (PEA2-alpha B) (SL Length = 453 Score = 30.4 bits (67), Expect = 2.3 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +2 Query: 44 QAQRENRRPRPGQPLPIPDPAPSLLHGSSASPRP 145 Q +R R P P P P+P SL H ++ +P+P Sbjct: 203 QLRRTAMRVSPHHPAPTPNPRASLNHSTAFNPQP 236
>RUNX1_MOUSE (Q03347) Runt-related transcription factor 1 (Core-binding factor,| alpha 2 subunit) (CBF-alpha 2) (Acute myeloid leukemia 1 protein) (Oncogene AML-1) (Polyomavirus enhancer-binding protein 2 alpha B subunit) (PEBP2-alpha B) (PEA2-alpha B) (SL Length = 451 Score = 30.4 bits (67), Expect = 2.3 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +2 Query: 44 QAQRENRRPRPGQPLPIPDPAPSLLHGSSASPRP 145 Q +R R P P P P+P SL H ++ +P+P Sbjct: 203 QLRRTAMRVSPHHPAPTPNPRASLNHSTAFNPQP 236
>RUNX1_RAT (Q63046) Runt-related transcription factor 1 (Core-binding factor,| alpha 2 subunit) (CBF-alpha 2) (Acute myeloid leukemia 1 protein) (Oncogene AML-1) (Polyomavirus enhancer-binding protein 2 alpha B subunit) (PEBP2-alpha B) (PEA2-alpha B) Length = 450 Score = 30.4 bits (67), Expect = 2.3 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +2 Query: 44 QAQRENRRPRPGQPLPIPDPAPSLLHGSSASPRP 145 Q +R R P P P P+P SL H ++ +P+P Sbjct: 203 QLRRTAMRVSPHHPAPTPNPRASLNHSTAFNPQP 236
>AMPH_MOUSE (Q7TQF7) Amphiphysin| Length = 686 Score = 30.4 bits (67), Expect = 2.3 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = +2 Query: 74 PGQPLPIPDPAPSLLHG-SSASPRPIRLRNPQE 169 P +P P+P P S H + ASP P+R R+P + Sbjct: 264 PEEPSPLPSPTASPNHTLAPASPAPVRPRSPSQ 296
>CBP1_CAEEL (P34545) Protein cbp-1| Length = 2056 Score = 30.4 bits (67), Expect = 2.3 Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 2/54 (3%) Frame = -3 Query: 398 PWRGRPGSRKPESRNGRESQQEGTSGAAQAAA--QRESVRGQDTAHAEHQSGAG 243 P G+PG + +++ + QQ AQAAA Q++ R Q+ A A ++GAG Sbjct: 332 PPNGQPGPQAAAAQHAAQ-QQAAAQAQAQAAAQQQQQQQREQEAAAAAQRNGAG 384
>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)| (Fragment) Length = 449 Score = 30.4 bits (67), Expect = 2.3 Identities = 14/36 (38%), Positives = 17/36 (47%) Frame = +2 Query: 68 PRPGQPLPIPDPAPSLLHGSSASPRPIRLRNPQEQP 175 P P P P P PAP + S SP+P + P P Sbjct: 68 PSPSPPKPPPSPAPKPVPPPSPSPKPSPPKPPAPSP 103
>JPH2_MOUSE (Q9ET78) Junctophilin-2 (Junctophilin type 2) (JP-2)| Length = 696 Score = 30.0 bits (66), Expect = 3.1 Identities = 12/36 (33%), Positives = 18/36 (50%) Frame = +2 Query: 68 PRPGQPLPIPDPAPSLLHGSSASPRPIRLRNPQEQP 175 P + P P+P P + SA P P+ P+E+P Sbjct: 573 PLEDEQEPEPEPEPEVRRSDSAPPSPVSATVPEEEP 608
>SYN2_HUMAN (Q92777) Synapsin-2 (Synapsin II)| Length = 582 Score = 30.0 bits (66), Expect = 3.1 Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 4/42 (9%) Frame = +2 Query: 62 RRPRPGQPLPIPDPAPSLLHGS----SASPRPIRLRNPQEQP 175 +RP P QP P P P P S +ASP P R P P Sbjct: 27 QRPEPQQPPPPPPPGPGAASASAAPPTASPGPERKPPPASAP 68
>5E5_RAT (Q63003) 5E5 antigen| Length = 825 Score = 30.0 bits (66), Expect = 3.1 Identities = 13/24 (54%), Positives = 13/24 (54%) Frame = +2 Query: 68 PRPGQPLPIPDPAPSLLHGSSASP 139 P PG P P PDP P L GS P Sbjct: 164 PDPGAPRPPPDPGPLPLPGSQEKP 187
>KCNN3_HUMAN (Q9UGI6) Small conductance calcium-activated potassium channel| protein 3 (SK3) (SKCa3) Length = 736 Score = 29.6 bits (65), Expect = 4.0 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = +2 Query: 44 QAQRENRRPRPGQPLPIPDPAPSLLHGSSASPRPIRLRNPQEQ 172 Q Q++ ++ + P P P AP G S P+P +L+ Q+Q Sbjct: 30 QQQQQQQQQQQQPPPPAPPAAPQQPLGPSLQPQPPQLQQQQQQ 72
>T2_MOUSE (Q06666) Octapeptide-repeat protein T2| Length = 185 Score = 29.6 bits (65), Expect = 4.0 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 5/57 (8%) Frame = -3 Query: 392 RGRPGSRKPESRNGRESQQE-----GTSGAAQAAAQRESVRGQDTAHAEHQSGAGAG 237 RGR R+ E + GRE++++ G +A QR R + AE Q G G Sbjct: 21 RGREAERQRERQRGREAERQRGRERGREAEREAERQRGRERQRGRGEAERQRGRERG 77
>SYN2_RAT (Q63537) Synapsin-2 (Synapsin II)| Length = 586 Score = 29.6 bits (65), Expect = 4.0 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Frame = +2 Query: 62 RRPRPGQPLPIPDP--APSLLHGSSASPRPIRLRNPQEQP 175 +RP P QP P P P A + S+ASP P R P + P Sbjct: 27 QRPEPQQPPPAPGPGTATASAATSAASPGPERRPPPAQAP 66
>SYN2_MOUSE (Q64332) Synapsin-2 (Synapsin II)| Length = 586 Score = 29.6 bits (65), Expect = 4.0 Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Frame = +2 Query: 62 RRPRPGQPLPIPDP--APSLLHGSSASPRPIRLRNPQEQP 175 +RP P QP P P P A + S+ASP P R P + P Sbjct: 27 QRPEPQQPPPAPGPGAATASAATSAASPGPERRPPPAQAP 66
>NRG2_RAT (O35569) Pro-neuregulin-2, membrane-bound isoform precursor| (Pro-NRG2) [Contains: Neuregulin-2 (NRG-2) (Neural- and thymus-derived activator for ERBB kinases) (NTAK)] Length = 868 Score = 29.6 bits (65), Expect = 4.0 Identities = 20/78 (25%), Positives = 31/78 (39%) Frame = -3 Query: 464 RRRCCPEGRPLRRRGPCSSYSSPWRGRPGSRKPESRNGRESQQEGTSGAAQAAAQRESVR 285 R+ CC P + CSSYS S S + S +S ++ ++ R S Sbjct: 2 RQVCCSALPPPLEKARCSSYSY-------SDSSSSSSSNNSSSSTSSRSSSRSSSRSSRG 54 Query: 284 GQDTAHAEHQSGAGAGGI 231 T + SG+ +G I Sbjct: 55 STTTTSSSENSGSNSGSI 72
>US02_EHV1B (P28964) Gene 68 protein| Length = 418 Score = 29.6 bits (65), Expect = 4.0 Identities = 15/38 (39%), Positives = 19/38 (50%) Frame = -3 Query: 443 GRPLRRRGPCSSYSSPWRGRPGSRKPESRNGRESQQEG 330 G PLR R P +P R P R+ R GR+ Q+ G Sbjct: 375 GLPLRARSPPQCQPAPPRLGPHLRRSRGRGGRQLQRRG 412
>LTBP4_MOUSE (Q8K4G1) Latent transforming growth factor beta-binding protein 4| precursor (LTBP-4) Length = 1666 Score = 29.6 bits (65), Expect = 4.0 Identities = 16/42 (38%), Positives = 19/42 (45%), Gaps = 1/42 (2%) Frame = +2 Query: 53 RENRRPRP-GQPLPIPDPAPSLLHGSSASPRPIRLRNPQEQP 175 R RPRP +P P P P P + PRP P+ QP Sbjct: 524 RPEPRPRPESRPRPEPRPRPEPRPQPESQPRPESRPRPESQP 565
>RM02_MARPO (P26859) Mitochondrial 60S ribosomal protein L2| Length = 501 Score = 29.6 bits (65), Expect = 4.0 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Frame = +2 Query: 53 RENRRPRPGQPLPIPDPAPSLLH--GSSASPRPIRLRNP 163 +++RRP P IP+ AP LH G S S R +R P Sbjct: 243 KKDRRPEMAGPHTIPEHAPRALHAVGPSGSGRVLRTSEP 281
>IF4B_HUMAN (P23588) Eukaryotic translation initiation factor 4B (eIF-4B)| Length = 611 Score = 29.3 bits (64), Expect = 5.2 Identities = 17/47 (36%), Positives = 21/47 (44%) Frame = -3 Query: 437 PLRRRGPCSSYSSPWRGRPGSRKPESRNGRESQQEGTSGAAQAAAQR 297 P R P + S WR + SR G ES Q GTS + A+R Sbjct: 394 PKLERRPRERHPS-WRSEETQERERSRTGSESSQTGTSTTSSRNARR 439
>FILA_HUMAN (P20930) Filaggrin| Length = 4061 Score = 29.3 bits (64), Expect = 5.2 Identities = 17/51 (33%), Positives = 22/51 (43%) Frame = -3 Query: 392 RGRPGSRKPESRNGRESQQEGTSGAAQAAAQRESVRGQDTAHAEHQSGAGA 240 R GS + +SR+G + + A ES R T HAE SG A Sbjct: 1616 RNHYGSAREQSRHGSRNPRSHQEDRASHGHSAESSRQSGTRHAETSSGGQA 1666 Score = 28.5 bits (62), Expect = 8.9 Identities = 21/64 (32%), Positives = 26/64 (40%) Frame = -3 Query: 431 RRRGPCSSYSSPWRGRPGSRKPESRNGRESQQEGTSGAAQAAAQRESVRGQDTAHAEHQS 252 RR G S R GS + +SR+G + A ES R T HAE+ S Sbjct: 2258 RRSGSAS------RNHHGSAQEQSRDGSRHPRSHHEDRAGHGHSAESSRQSGTHHAENSS 2311 Query: 251 GAGA 240 G A Sbjct: 2312 GGQA 2315
>ZO3_MOUSE (Q9QXY1) Tight junction protein ZO-3 (Zonula occludens 3 protein)| (Zona occludens 3 protein) (Tight junction protein 3) Length = 905 Score = 29.3 bits (64), Expect = 5.2 Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 7/79 (8%) Frame = -3 Query: 440 RPLRRRGPCSSYSSPWRGRPGSRKPESRNGRESQQEGTSGAAQAAAQRE-----SVRGQD 276 RP R + P + +SP G S + E+ +GR + + +SG+ ++ +R RG+ Sbjct: 91 RPRRVQLPATK-ASPASGHQLSDQEEADHGRGYEGDSSSGSGRSWGERSRRSRAGRRGRV 149 Query: 275 TAHAEHQSGAG--AGGIEM 225 +H SG G A G+++ Sbjct: 150 GSHGRRSSGGGSEANGLDL 168
>MED12_HUMAN (Q93074) Mediator of RNA polymerase II transcription subunit 12| (Thyroid hormone receptor-associated protein complex 230 kDa component) (Trap230) (Activator-recruited cofactor 240 kDa component) (ARC240) (CAG repeat protein 45) (OPA-containin Length = 2212 Score = 29.3 bits (64), Expect = 5.2 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 9/46 (19%) Frame = +2 Query: 65 RPRPG----QPLPIPD-----PAPSLLHGSSASPRPIRLRNPQEQP 175 RPRP +PLP+P PAP+LL +P P + P P Sbjct: 1766 RPRPRAYYLEPLPLPPEDEEPPAPTLLEPEKKAPEPPKTDKPGAAP 1811
>GP1_CHLRE (Q9FPQ6) Vegetative cell wall protein gp1 precursor| (Hydroxyproline-rich glycoprotein 1) Length = 555 Score = 29.3 bits (64), Expect = 5.2 Identities = 14/36 (38%), Positives = 16/36 (44%) Frame = +2 Query: 68 PRPGQPLPIPDPAPSLLHGSSASPRPIRLRNPQEQP 175 P P P P P P+PS S SP P +P P Sbjct: 336 PSPAPPTPSPSPSPSPSPSPSPSPSPSPSPSPSPIP 371 Score = 28.5 bits (62), Expect = 8.9 Identities = 15/36 (41%), Positives = 18/36 (50%) Frame = +2 Query: 68 PRPGQPLPIPDPAPSLLHGSSASPRPIRLRNPQEQP 175 P P P P P P+PS S SP PI +P+ P Sbjct: 345 PSPS-PSPSPSPSPSPSPSPSPSPSPIPSPSPKPSP 379
>ZSWM5_MOUSE (Q80TC6) Zinc finger SWIM domain-containing protein 5| Length = 1188 Score = 29.3 bits (64), Expect = 5.2 Identities = 21/67 (31%), Positives = 25/67 (37%) Frame = -3 Query: 437 PLRRRGPCSSYSSPWRGRPGSRKPESRNGRESQQEGTSGAAQAAAQRESVRGQDTAHAEH 258 P R C S +RG PG+ G +EG AAA S G A + Sbjct: 103 PRNEREICMYSSFQYRGGPGAGAAAGAAGASPVEEGPPPPPGAAAPAGSAPGAAGAGSSP 162 Query: 257 QSGAGAG 237 GAG G Sbjct: 163 GLGAGTG 169
>SI1L2_RAT (Q5JCS6) Signal-induced proliferation-associated 1-like protein 2| (Serine-rich synapse-associated protein) Length = 1722 Score = 29.3 bits (64), Expect = 5.2 Identities = 17/62 (27%), Positives = 25/62 (40%), Gaps = 1/62 (1%) Frame = -3 Query: 440 RPLRRRGPCSSYSSPWRGRPGSRKPESRNGRESQQ-EGTSGAAQAAAQRESVRGQDTAHA 264 +P R+G + Y W+ GS PE E + G A+Q +V G A Sbjct: 1385 KPYHRQGAANKYVIGWKKSEGSPPPEEPEVTECPRIYGEMDIMSTASQHPAVVGDSVPEA 1444 Query: 263 EH 258 +H Sbjct: 1445 QH 1446
>H1X_HUMAN (Q92522) Histone H1x| Length = 213 Score = 29.3 bits (64), Expect = 5.2 Identities = 13/51 (25%), Positives = 22/51 (43%) Frame = -3 Query: 392 RGRPGSRKPESRNGRESQQEGTSGAAQAAAQRESVRGQDTAHAEHQSGAGA 240 RG P + + ++++ A A ++ RGQ H+ GAGA Sbjct: 128 RGAPAAATAPAPTAHKAKKAAPGAAGSRRADKKPARGQKPEQRSHKKGAGA 178
>NFAC4_HUMAN (Q14934) Nuclear factor of activated T-cells, cytoplasmic 4| (NF-ATc4) (NFATc4) (T cell transcription factor NFAT3) (NF-AT3) Length = 902 Score = 28.9 bits (63), Expect = 6.8 Identities = 15/32 (46%), Positives = 16/32 (50%) Frame = +2 Query: 68 PRPGQPLPIPDPAPSLLHGSSASPRPIRLRNP 163 PRPG P P PAPS S R +RL P Sbjct: 67 PRPGMHSPPPRPAPSPGTWESQPARSVRLGGP 98
>KTNA1_ARATH (Q9SEX2) Katanin p60 ATPase-containing subunit (EC 3.6.4.3)| (Katanin p60 subunit) (p60 katanin) (Atp60) (CAD ATPase) (Katanin 1) (BOTERO1 protein) (ECTOPIC ROOT HAIR 3 protein) (FAT ROOT protein) (FRAGILE FIBER 2 protein) (AtAAA1) Length = 523 Score = 28.5 bits (62), Expect = 8.9 Identities = 16/48 (33%), Positives = 21/48 (43%) Frame = -3 Query: 425 RGPCSSYSSPWRGRPGSRKPESRNGRESQQEGTSGAAQAAAQRESVRG 282 RGP + RG G +S G S G GAA + + ES+ G Sbjct: 155 RGPTTRTGPASRGGRGGATSKSTAGARSSTAGKKGAASKSNKAESMNG 202
>BSN_RAT (O88778) Bassoon protein| Length = 3937 Score = 28.5 bits (62), Expect = 8.9 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -1 Query: 439 VPSGAADLALLTLPHGEAGRAAGNRNHETDENRSKKEP 326 +PS A+D++L T EAGR+ + H R EP Sbjct: 2524 LPSSASDMSLQTEEQWEAGRSGIKKRHSMPRLRDACEP 2561
>BSN_MOUSE (O88737) Bassoon protein| Length = 3941 Score = 28.5 bits (62), Expect = 8.9 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = -1 Query: 439 VPSGAADLALLTLPHGEAGRAAGNRNHETDENRSKKEP 326 +PS A+D++L T EAGR+ + H R EP Sbjct: 2538 LPSSASDMSLQTEEQWEAGRSGIKKRHSMPRLRDACEP 2575
>ADRB1_MOUSE (P34971) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1| adrenoreceptor) Length = 466 Score = 28.5 bits (62), Expect = 8.9 Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 5/39 (12%) Frame = +2 Query: 71 RPGQPLPIPDPAP-----SLLHGSSASPRPIRLRNPQEQ 172 RP P P P P P SL +G S+ RP RL +EQ Sbjct: 271 RPPSPEPSPSPGPPRPADSLANGRSSKRRPSRLVALREQ 309
>WASF2_MOUSE (Q8BH43) Wiskott-Aldrich syndrome protein family member 2| (WASP-family protein member 2) (WAVE-2 protein) Length = 497 Score = 28.5 bits (62), Expect = 8.9 Identities = 11/26 (42%), Positives = 15/26 (57%) Frame = +2 Query: 68 PRPGQPLPIPDPAPSLLHGSSASPRP 145 P P P+ +P P PS+ GS +P P Sbjct: 322 PPPPPPMSVPPPLPSMGFGSPGTPPP 347
>SNX41_CRYNE (Q5KKB9) Sorting nexin-41| Length = 638 Score = 28.5 bits (62), Expect = 8.9 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 Query: 68 PRPGQPLPIPDPAPSLLHGSSASPRP 145 PRP P P+P SL+ +S SP P Sbjct: 20 PRPSLPPPVPRKPSSLVSAASGSPPP 45
>ADRB1_PIG (Q28998) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1| adrenoreceptor) Length = 468 Score = 28.5 bits (62), Expect = 8.9 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = +2 Query: 68 PRPGQPLPIPDPAPSLLHGSSASPRPIRLRNPQEQ 172 P PG PLP A + +G ++ RP RL +EQ Sbjct: 276 PSPGSPLPAAAAAAPVANGRTSKRRPSRLVALREQ 310
>IF2_DESDG (Q30WJ0) Translation initiation factor IF-2| Length = 984 Score = 28.5 bits (62), Expect = 8.9 Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 9/78 (11%) Frame = -3 Query: 431 RRRGPCSSYSSPWRG---------RPGSRKPESRNGRESQQEGTSGAAQAAAQRESVRGQ 279 R GP S P G RPG +P + G+ +Q E +S A ++++ +G+ Sbjct: 294 RPGGPRQGDSRPGDGRPAPRSGAPRPGGARPAAGFGQPAQAENSSPFADGQSKKKRQKGR 353 Query: 278 DTAHAEHQSGAGAGGIEM 225 T GAGG +M Sbjct: 354 RTVEF---GDKGAGGKKM 368
>UNC33_CAEEL (Q01630) Uncoordinated protein 33 (Protein unc-33)| Length = 854 Score = 28.5 bits (62), Expect = 8.9 Identities = 18/57 (31%), Positives = 23/57 (40%) Frame = -3 Query: 404 SSPWRGRPGSRKPESRNGRESQQEGTSGAAQAAAQRESVRGQDTAHAEHQSGAGAGG 234 SS +G P +RNG SGA + A ES Q A ++ G GG Sbjct: 273 SSSKKGHPSEDGDSTRNGETPTDRRNSGAIEETADGES-SAQSAAEKKNSGDDGNGG 328
>BC11B_MOUSE (Q99PV8) B-cell lymphoma/leukemia 11B (B-cell CLL/lymphoma 11B)| (Radiation-induced tumor suppressor gene 1 protein) (mRit1) (COUP-TF-interacting protein 2) Length = 884 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -3 Query: 428 RRGPCSSYSSPWRGRPGSRKPESRNGRES 342 R G S S+P G PG +P S+ GR S Sbjct: 757 RSGTASGGSTPHLGGPGPGRPSSKEGRRS 785
>BC11B_HUMAN (Q9C0K0) B-cell lymphoma/leukemia 11B (B-cell CLL/lymphoma 11B)| (Radiation-induced tumor suppressor gene 1 protein) (hRit1) (COUP-TF-interacting protein 2) Length = 894 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -3 Query: 428 RRGPCSSYSSPWRGRPGSRKPESRNGRES 342 R G S S+P G PG +P S+ GR S Sbjct: 767 RSGTASGGSTPHLGGPGPGRPSSKEGRRS 795 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 37,477,612 Number of Sequences: 219361 Number of extensions: 606928 Number of successful extensions: 5228 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 4006 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5024 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
