ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast75f04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 139 bits (70), Expect = 9e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 235 ctcctacctcgcgtacctcgccgccgcgggcgccgtcctccccggcaagctcgtcgccgg 294 ||||||||| | |||||||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 22235432 ctcctacctaggctacctcgccgccgccggcgccgtcctccccggcaagctcgtccccgg 22235491 Query: 295 cgccgtcctccccgactcctcccgcctccactaccgctgcaa 336 ||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 22235492 agccgtcctcccggactcgtcccgcctccactaccgctgcaa 22235533
>dbj|AP006171.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0070E11 Length = 142855 Score = 139 bits (70), Expect = 9e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 235 ctcctacctcgcgtacctcgccgccgcgggcgccgtcctccccggcaagctcgtcgccgg 294 ||||||||| | |||||||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 55330 ctcctacctaggctacctcgccgccgccggcgccgtcctccccggcaagctcgtccccgg 55389 Query: 295 cgccgtcctccccgactcctcccgcctccactaccgctgcaa 336 ||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 55390 agccgtcctcccggactcgtcccgcctccactaccgctgcaa 55431
>dbj|AP006170.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0042B15 Length = 157981 Score = 139 bits (70), Expect = 9e-30 Identities = 94/102 (92%) Strand = Plus / Plus Query: 235 ctcctacctcgcgtacctcgccgccgcgggcgccgtcctccccggcaagctcgtcgccgg 294 ||||||||| | |||||||||||||| ||||||||||||||||||||||||||| |||| Sbjct: 156925 ctcctacctaggctacctcgccgccgccggcgccgtcctccccggcaagctcgtccccgg 156984 Query: 295 cgccgtcctccccgactcctcccgcctccactaccgctgcaa 336 ||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 156985 agccgtcctcccggactcgtcccgcctccactaccgctgcaa 157026
>dbj|AK112105.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-110-E10, full insert sequence Length = 1456 Score = 129 bits (65), Expect = 9e-27 Identities = 161/193 (83%) Strand = Plus / Plus Query: 200 ctggcgccctcccggagcgcggcggtggtgctggcctcctacctcgcgtacctcgccgcc 259 |||| |||||| |||| |||| ||||||||| ||||||||| | ||||| ||| || Sbjct: 270 ctggtgccctcgtggagtgcggtggtggtgctattctcctacctaggctaccttgccacc 329 Query: 260 gcgggcgccgtcctccccggcaagctcgtcgccggcgccgtcctccccgactcctcccgc 319 || ||||| |||||||| |||||||| ||| |||| ||||||||||| ||||| |||||| Sbjct: 330 gctggcgctgtcctccctggcaagcttgtccccggagccgtcctcccggactcgtcccgc 389 Query: 320 ctccactaccgctgcaatggtctgctctcgctcctgctgctcttggggctctcctcgctc 379 ||||||||||||||||||||| || |||||||||| || | ||| |||||| ||||| Sbjct: 390 ctccactaccgctgcaatggtttggtctcgctcctcctcttgctggtgctctctgcgctc 449 Query: 380 ggcgtctacatgg 392 || |||||||||| Sbjct: 450 ggtgtctacatgg 462
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 107 bits (54), Expect = 3e-20 Identities = 93/106 (87%) Strand = Plus / Minus Query: 235 ctcctacctcgcgtacctcgccgccgcgggcgccgtcctccccggcaagctcgtcgccgg 294 ||||||||| | ||||| ||| |||| ||||| |||||||| |||||||| ||| |||| Sbjct: 14211479 ctcctacctaggctaccttgccaccgctggcgctgtcctccctggcaagcttgtccccgg 14211420 Query: 295 cgccgtcctccccgactcctcccgcctccactaccgctgcaatggt 340 ||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 14211419 agccgtcctcccggactcgtcccgcctccactaccgctgcaatggt 14211374 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 agctcgtcgccggcgccgtc 301 |||||||||||||||||||| Sbjct: 37558454 agctcgtcgccggcgccgtc 37558473
>dbj|AP003369.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1102E12 Length = 155692 Score = 107 bits (54), Expect = 3e-20 Identities = 93/106 (87%) Strand = Plus / Minus Query: 235 ctcctacctcgcgtacctcgccgccgcgggcgccgtcctccccggcaagctcgtcgccgg 294 ||||||||| | ||||| ||| |||| ||||| |||||||| |||||||| ||| |||| Sbjct: 151193 ctcctacctaggctaccttgccaccgctggcgctgtcctccctggcaagcttgtccccgg 151134 Query: 295 cgccgtcctccccgactcctcccgcctccactaccgctgcaatggt 340 ||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 151133 agccgtcctcccggactcgtcccgcctccactaccgctgcaatggt 151088
>dbj|AP002870.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0458A05 Length = 120593 Score = 107 bits (54), Expect = 3e-20 Identities = 93/106 (87%) Strand = Plus / Minus Query: 235 ctcctacctcgcgtacctcgccgccgcgggcgccgtcctccccggcaagctcgtcgccgg 294 ||||||||| | ||||| ||| |||| ||||| |||||||| |||||||| ||| |||| Sbjct: 7169 ctcctacctaggctaccttgccaccgctggcgctgtcctccctggcaagcttgtccccgg 7110 Query: 295 cgccgtcctccccgactcctcccgcctccactaccgctgcaatggt 340 ||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 7109 agccgtcctcccggactcgtcccgcctccactaccgctgcaatggt 7064
>ref|NM_196979.1| Oryza sativa (japonica cultivar-group) putative alcohol oxidase (OSJNBa0001K12.13), mRNA Length = 2271 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 253 cgccgccgcgggcgccgtcctcc 275 ||||||||||||||||||||||| Sbjct: 211 cgccgccgcgggcgccgtcctcc 189
>gb|AC078948.11| Oryza sativa chromosome 10 BAC OSJNBa0001K12 genomic sequence, complete sequence Length = 144724 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 253 cgccgccgcgggcgccgtcctcc 275 ||||||||||||||||||||||| Sbjct: 83842 cgccgccgcgggcgccgtcctcc 83820
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 253 cgccgccgcgggcgccgtcctcc 275 ||||||||||||||||||||||| Sbjct: 17108494 cgccgccgcgggcgccgtcctcc 17108516 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 131 gtgactagtttgggatcccctttc 154 ||||||||||||| |||||||||| Sbjct: 867807 gtgactagtttggaatcccctttc 867784
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 252 tcgccgccgcgggcgccgtcctc 274 ||||||||||||||||||||||| Sbjct: 2085300 tcgccgccgcgggcgccgtcctc 2085278
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 253 cgccgccgcgggcgccgtcctcc 275 ||||||||||||||||||||||| Sbjct: 17117534 cgccgccgcgggcgccgtcctcc 17117556 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 131 gtgactagtttgggatcccctttc 154 ||||||||||||| |||||||||| Sbjct: 867804 gtgactagtttggaatcccctttc 867781
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 gctcgtcgccggcgccgtcctc 304 |||||||||||||||||||||| Sbjct: 607192 gctcgtcgccggcgccgtcctc 607171
>emb|AL837520.26| Mouse DNA sequence from clone RP23-412O4 on chromosome 2, complete sequence Length = 128625 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 131 gtgactagtttgggatcccctt 152 |||||||||||||||||||||| Sbjct: 42083 gtgactagtttgggatcccctt 42104
>ref|NM_188970.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1269 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 281 aagctcgtcgccggcgccgtc 301 ||||||||||||||||||||| Sbjct: 919 aagctcgtcgccggcgccgtc 939
>ref|XM_519464.1| PREDICTED: Pan troglodytes protein disulfide isomerase related protein (calcium-binding protein, intestinal-related) (LOC463822), mRNA Length = 2829 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 gctcctgctgctcttggggct 369 ||||||||||||||||||||| Sbjct: 308 gctcctgctgctcttggggct 328
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 177 acgcggccgacgtgctcgcgg 197 ||||||||||||||||||||| Sbjct: 3241890 acgcggccgacgtgctcgcgg 3241910
>ref|XM_472987.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1098 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 250 cctcgccgccgcgggcgccgtcctccccg 278 ||||||||| || |||||||||||||||| Sbjct: 56 cctcgccgcagcaggcgccgtcctccccg 84
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.6 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Minus Query: 158 gcggcgacgcggatgatggacgcggccgacgtgctcg 194 ||||||| ||||||| | ||||||||||||||||||| Sbjct: 1549119 gcggcgaggcggatg-tcgacgcggccgacgtgctcg 1549084
>ref|NM_004911.3| Homo sapiens protein disulfide isomerase family A, member 4 (PDIA4), mRNA Length = 2930 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 gctcctgctgctcttggggct 369 ||||||||||||||||||||| Sbjct: 266 gctcctgctgctcttggggct 286
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 189 tgctcgcggcgctggcgccct 209 ||||||||||||||||||||| Sbjct: 1401772 tgctcgcggcgctggcgccct 1401792
>gb|AC093743.2| Homo sapiens BAC clone RP11-24N19 from 7, complete sequence Length = 76471 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 349 gctcctgctgctcttggggct 369 ||||||||||||||||||||| Sbjct: 47034 gctcctgctgctcttggggct 47014
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 1.6 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Minus Query: 158 gcggcgacgcggatgatggacgcggccgacgtgctcg 194 ||||||| ||||||| | ||||||||||||||||||| Sbjct: 2883864 gcggcgaggcggatg-tcgacgcggccgacgtgctcg 2883829
>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29 Length = 293050 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 188 gtgctcgcggcgctggcgccctccc 212 |||||||||||||||| |||||||| Sbjct: 193924 gtgctcgcggcgctggtgccctccc 193900
>emb|AL731617.3|OSJN00261 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0076N16, complete sequence Length = 146313 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 250 cctcgccgccgcgggcgccgtcctccccg 278 ||||||||| || |||||||||||||||| Sbjct: 65234 cctcgccgcagcaggcgccgtcctccccg 65206
>gb|BC011754.2| Homo sapiens protein disulfide isomerase family A, member 4, mRNA (cDNA clone MGC:19707 IMAGE:3532913), complete cds Length = 2921 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 gctcctgctgctcttggggct 369 ||||||||||||||||||||| Sbjct: 257 gctcctgctgctcttggggct 277
>gb|BC001928.1| Homo sapiens protein disulfide isomerase family A, member 4, mRNA (cDNA clone MGC:3984 IMAGE:2819726), complete cds Length = 2732 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 gctcctgctgctcttggggct 369 ||||||||||||||||||||| Sbjct: 68 gctcctgctgctcttggggct 88
>gb|BC000425.2| Homo sapiens protein disulfide isomerase family A, member 4, mRNA (cDNA clone MGC:8346 IMAGE:2819726), complete cds Length = 2732 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 gctcctgctgctcttggggct 369 ||||||||||||||||||||| Sbjct: 68 gctcctgctgctcttggggct 88
>gb|BC006344.2| Homo sapiens protein disulfide isomerase family A, member 4, mRNA (cDNA clone MGC:13117 IMAGE:4098367), complete cds Length = 2535 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 gctcctgctgctcttggggct 369 ||||||||||||||||||||| Sbjct: 256 gctcctgctgctcttggggct 276
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 cccggagcgcggcggtggtgc 230 ||||||||||||||||||||| Sbjct: 4221920 cccggagcgcggcggtggtgc 4221900
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.6 Identities = 34/37 (91%), Gaps = 1/37 (2%) Strand = Plus / Plus Query: 158 gcggcgacgcggatgatggacgcggccgacgtgctcg 194 ||||||| ||||||| | ||||||||||||||||||| Sbjct: 354305 gcggcgaggcggatg-tcgacgcggccgacgtgctcg 354340
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 250 cctcgccgccgcgggcgccgtcctccccg 278 ||||||||| || |||||||||||||||| Sbjct: 24505603 cctcgccgcagcaggcgccgtcctccccg 24505575 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 agctcgtcgccggcgccgtc 301 |||||||||||||||||||| Sbjct: 23136124 agctcgtcgccggcgccgtc 23136143 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 cctcgccgccgcgggcgccg 269 |||||||||||||||||||| Sbjct: 20944015 cctcgccgccgcgggcgccg 20944034
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 212 cggagcgcggcggtggtgctg 232 ||||||||||||||||||||| Sbjct: 20850372 cggagcgcggcggtggtgctg 20850392 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ctcgtcgccggcgccgtcct 303 |||||||||||||||||||| Sbjct: 6287455 ctcgtcgccggcgccgtcct 6287474 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ctcgtcgccggcgccgtcct 303 |||||||||||||||||||| Sbjct: 6282225 ctcgtcgccggcgccgtcct 6282244
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 281 aagctcgtcgccggcgccgtc 301 ||||||||||||||||||||| Sbjct: 20483868 aagctcgtcgccggcgccgtc 20483848 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 40 cgccgccgcagcctctgcatcccgc 64 ||||||||| ||||||||||||||| Sbjct: 17863974 cgccgccgcggcctctgcatcccgc 17863998 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 agctcgtcgccggcgccgtc 301 |||||||||||||||||||| Sbjct: 23257289 agctcgtcgccggcgccgtc 23257308 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 agctcgtcgccggcgccgtc 301 |||||||||||||||||||| Sbjct: 21862258 agctcgtcgccggcgccgtc 21862277
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 173 atggacgcggccgacgtgctcgcgg 197 |||||||||| |||||||||||||| Sbjct: 7147807 atggacgcggacgacgtgctcgcgg 7147831 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 44 gccgcagcctctgcatcccgccgtccac 71 ||||||||| |||||| ||||||||||| Sbjct: 8687533 gccgcagcccctgcataccgccgtccac 8687506
>dbj|AP004675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0709D11 Length = 146856 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 40 cgccgccgcagcctctgcatcccgc 64 ||||||||| ||||||||||||||| Sbjct: 85480 cgccgccgcggcctctgcatcccgc 85504
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 252 tcgccgccgcgggcgccgtcctccccggc 280 ||||||||| ||| ||||||||||||||| Sbjct: 867281 tcgccgccgtgggggccgtcctccccggc 867309
>emb|AL928757.3|CNS08CBU Oryza sativa chromosome 12, . BAC OSJNBb0046O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 101075 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 212 cggagcgcggcggtggtgctg 232 ||||||||||||||||||||| Sbjct: 52102 cggagcgcggcggtggtgctg 52122
>dbj|AP004463.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0456B03 Length = 152973 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 281 aagctcgtcgccggcgccgtc 301 ||||||||||||||||||||| Sbjct: 114498 aagctcgtcgccggcgccgtc 114478
>dbj|AK105071.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-C11, full insert sequence Length = 2822 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 250 cctcgccgccgcgggcgccgtcctccccg 278 ||||||||| || |||||||||||||||| Sbjct: 63 cctcgccgcagcaggcgccgtcctccccg 91
>dbj|AK104854.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-B10, full insert sequence Length = 1353 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 250 cctcgccgccgcgggcgccgtcctccccg 278 ||||||||| || |||||||||||||||| Sbjct: 139 cctcgccgcagcaggcgccgtcctccccg 167
>dbj|AK101013.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149B10, full insert sequence Length = 1875 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 212 cggagcgcggcggtggtgctg 232 ||||||||||||||||||||| Sbjct: 193 cggagcgcggcggtggtgctg 213
>dbj|AK099985.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013130A06, full insert sequence Length = 1889 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 212 cggagcgcggcggtggtgctg 232 ||||||||||||||||||||| Sbjct: 193 cggagcgcggcggtggtgctg 213
>dbj|AK066522.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013072G15, full insert sequence Length = 1373 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 250 cctcgccgccgcgggcgccgtcctccccg 278 ||||||||| || |||||||||||||||| Sbjct: 139 cctcgccgcagcaggcgccgtcctccccg 167
>emb|AL442110.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0512B01, complete sequence Length = 140069 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 cccgccgtccaccgtcgaccc 80 ||||||||||||||||||||| Sbjct: 25319 cccgccgtccaccgtcgaccc 25299 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 cccgccgtccaccgtcgaccc 80 ||||||||||||||||||||| Sbjct: 16406 cccgccgtccaccgtcgaccc 16386
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 212 cggagcgcggcggtggtgctg 232 ||||||||||||||||||||| Sbjct: 20776586 cggagcgcggcggtggtgctg 20776606 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ctcgtcgccggcgccgtcct 303 |||||||||||||||||||| Sbjct: 6287330 ctcgtcgccggcgccgtcct 6287349 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ctcgtcgccggcgccgtcct 303 |||||||||||||||||||| Sbjct: 6282100 ctcgtcgccggcgccgtcct 6282119
>emb|AL732377.4|CNS08C90 Oryza sativa chromosome 12, . BAC OSJNBa0036E08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 149022 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 212 cggagcgcggcggtggtgctg 232 ||||||||||||||||||||| Sbjct: 148213 cggagcgcggcggtggtgctg 148233
>emb|AL606613.3|OSJN00051 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084K20, complete sequence Length = 116983 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 250 cctcgccgccgcgggcgccgtcctccccg 278 ||||||||| || |||||||||||||||| Sbjct: 98925 cctcgccgcagcaggcgccgtcctccccg 98897
>gb|J05016.1|HUMERP72H Human (clone pA3) protein disulfide isomerase related protein (ERp72) mRNA, complete cds Length = 2865 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 349 gctcctgctgctcttggggct 369 ||||||||||||||||||||| Sbjct: 69 gctcctgctgctcttggggct 89
>ref|XM_476051.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3372 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 cctcgccgccgcgggcgccg 269 |||||||||||||||||||| Sbjct: 2239 cctcgccgccgcgggcgccg 2220
>ref|XM_482906.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1317 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 agctcgtcgccggcgccgtc 301 |||||||||||||||||||| Sbjct: 1007 agctcgtcgccggcgccgtc 1026
>ref|XM_482682.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1740 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 agctcgtcgccggcgccgtc 301 |||||||||||||||||||| Sbjct: 196 agctcgtcgccggcgccgtc 215
>ref|NM_194585.1| Oryza sativa (japonica cultivar-group) putative gag-pol precursor (OJ1014H12.9), mRNA Length = 1605 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 131 gtgactagtttgggatcccctttc 154 ||||||||||||| |||||||||| Sbjct: 953 gtgactagtttggaatcccctttc 930
>ref|XM_470292.1| Oryza sativa (japonica cultivar-group), mRNA Length = 849 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 agctcgtcgccggcgccgtc 301 |||||||||||||||||||| Sbjct: 668 agctcgtcgccggcgccgtc 687
>ref|NM_193094.1| Oryza sativa (japonica cultivar-group), mRNA Length = 951 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ctcgccgccgcgggcgccgt 270 |||||||||||||||||||| Sbjct: 237 ctcgccgccgcgggcgccgt 218
>ref|NM_185759.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1401 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 agctcgtcgccggcgccgtc 301 |||||||||||||||||||| Sbjct: 712 agctcgtcgccggcgccgtc 731
>ref|XM_472775.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1113 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 agctcgtcgccggcgccgtc 301 |||||||||||||||||||| Sbjct: 818 agctcgtcgccggcgccgtc 837
>gb|AC119671.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0084F23, complete sequence Length = 89829 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 250 cctcgccgccgcgggcgccgtcct 273 |||||||||||||| ||||||||| Sbjct: 62471 cctcgccgccgcggccgccgtcct 62494
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 180 cggccgacgtgctcgcggcgctggcgcc 207 ||||||||| ||||||||||||| |||| Sbjct: 551204 cggccgacgcgctcgcggcgctgtcgcc 551231
>gb|AC087553.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0685E10, complete sequence Length = 156772 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 cctcgccgccgcgggcgccg 269 |||||||||||||||||||| Sbjct: 2586 cctcgccgccgcgggcgccg 2567
>ref|XM_324360.1| Neurospora crassa OR74A hypothetical protein (NCU05004.1) partial mRNA Length = 1356 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ctcgtcgccggcgccgtcct 303 |||||||||||||||||||| Sbjct: 778 ctcgtcgccggcgccgtcct 797
>ref|XM_950838.1| Neurospora crassa OR74A hypothetical protein (NCU05004.1) partial mRNA Length = 1356 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ctcgtcgccggcgccgtcct 303 |||||||||||||||||||| Sbjct: 778 ctcgtcgccggcgccgtcct 797
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 180 cggccgacgtgctcgcggcgctggcgcc 207 ||||||||| ||||||||||||| |||| Sbjct: 3223568 cggccgacgcgctcgcggcgctgtcgcc 3223541
>gb|AF378537.1| Unidentified bacterium clone SM63F4 environmental gene cassettes EGC163 and EGC164, partial sequence Length = 728 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 cgctggcgccctcccggagc 217 |||||||||||||||||||| Sbjct: 268 cgctggcgccctcccggagc 249
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 agctcgtcgccggcgccgtc 301 |||||||||||||||||||| Sbjct: 3690830 agctcgtcgccggcgccgtc 3690811
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 184 cgacgtgctcgcggcgctgg 203 |||||||||||||||||||| Sbjct: 2232279 cgacgtgctcgcggcgctgg 2232260 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 agcgcggcggtggtgctggc 234 |||||||||||||||||||| Sbjct: 322861 agcgcggcggtggtgctggc 322880
>gb|AC068473.19| Homo sapiens chromosome 18, clone RP11-567M16, complete sequence Length = 175721 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 gtcgccggcgccgtcctccc 306 |||||||||||||||||||| Sbjct: 175220 gtcgccggcgccgtcctccc 175239
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 276 ccggcaagctcgtcgccggc 295 |||||||||||||||||||| Sbjct: 3201915 ccggcaagctcgtcgccggc 3201934
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gacgtgctcgcggcgctggc 204 |||||||||||||||||||| Sbjct: 1656078 gacgtgctcgcggcgctggc 1656059
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 131 gtgactagtttgggatcccctttc 154 ||||||||||||| |||||||||| Sbjct: 867807 gtgactagtttggaatcccctttc 867784
>gb|AC079059.10| Homo sapiens chromosome 18, clone RP11-281L12, complete sequence Length = 145993 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 gtcgccggcgccgtcctccc 306 |||||||||||||||||||| Sbjct: 107439 gtcgccggcgccgtcctccc 107420
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 180 cggccgacgtgctcgcggcgctggcgcc 207 ||||||||| ||||||||||||| |||| Sbjct: 2953433 cggccgacgcgctcgcggcgctgtcgcc 2953406
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 cctcgccgccgcgggcgccg 269 |||||||||||||||||||| Sbjct: 283082 cctcgccgccgcgggcgccg 283101
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 238 ctacctcgcgtacctcgccgccgc 261 ||||||||| |||||||||||||| Sbjct: 218760 ctacctcgcctacctcgccgccgc 218783
>emb|AL731628.4|OSJN00282 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0088C09, complete sequence Length = 96079 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 cctcgccgccgcgggcgccg 269 |||||||||||||||||||| Sbjct: 47238 cctcgccgccgcgggcgccg 47257
>emb|AL663017.3|OSJN00149 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060P14, complete sequence Length = 139418 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 agctcgtcgccggcgccgtc 301 |||||||||||||||||||| Sbjct: 26316 agctcgtcgccggcgccgtc 26335
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gccgacgtgctcgcggcgct 201 |||||||||||||||||||| Sbjct: 1647437 gccgacgtgctcgcggcgct 1647456
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 ccgtcgcgccgcagctggct 125 |||||||||||||||||||| Sbjct: 6340862 ccgtcgcgccgcagctggct 6340881
>gb|AC084817.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0419C04, complete sequence Length = 136713 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 cctcgccgccgcgggcgccg 269 |||||||||||||||||||| Sbjct: 90801 cctcgccgccgcgggcgccg 90782
>gb|AY026671.1| Shorea johorensis internal transcribed spacer 1, partial sequence Length = 413 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 cgcgggcgccgtcctccccg 278 |||||||||||||||||||| Sbjct: 332 cgcgggcgccgtcctccccg 313
>gb|AY026670.1| Shorea javanica internal transcribed spacer 1, partial sequence Length = 411 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 259 cgcgggcgccgtcctccccg 278 |||||||||||||||||||| Sbjct: 330 cgcgggcgccgtcctccccg 311
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 agcgcggcggtggtgctggc 234 |||||||||||||||||||| Sbjct: 383029 agcgcggcggtggtgctggc 383048
>gb|AF453501.1| Actinosynnema pretiosum subsp. auranticum maytansinoid antitumor agent ansamitocin biosynthetic gene cluster I, partial sequence Length = 82746 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 181 ggccgacgtgctcgcggcgctggc 204 |||||||||| ||||||||||||| Sbjct: 23857 ggccgacgtggtcgcggcgctggc 23834
>gb|AC098694.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJ1014H12, complete sequence Length = 129420 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 131 gtgactagtttgggatcccctttc 154 ||||||||||||| |||||||||| Sbjct: 68375 gtgactagtttggaatcccctttc 68398
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 agctcgtcgccggcgccgtc 301 |||||||||||||||||||| Sbjct: 90547 agctcgtcgccggcgccgtc 90566
>gb|AC006951.6| Arabidopsis thaliana chromosome 2 clone T1O3 map RNS1, complete sequence Length = 99804 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgcagcctctgcatc 60 |||||||||||||||||||| Sbjct: 18692 gccgccgcagcctctgcatc 18673
>gb|AC023315.4| Homo sapiens chromosome 17, clone RP11-333J10, complete sequence Length = 135692 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 tcctccccgactcctcccgc 319 |||||||||||||||||||| Sbjct: 97989 tcctccccgactcctcccgc 97970
>gb|AF121864.2| Streptomyces chattanoogensis xylanase-arabinofuranosidase bifunctional enzyme (xyl23) gene, complete cds Length = 4777 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 cctcgccgccgcgggcgccg 269 |||||||||||||||||||| Sbjct: 1605 cctcgccgccgcgggcgccg 1624
>gb|AC025882.7| Homo sapiens chromosome 17, clone RP11-445F12, complete sequence Length = 181991 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 tcctccccgactcctcccgc 319 |||||||||||||||||||| Sbjct: 3108 tcctccccgactcctcccgc 3089
>gb|AC021594.9| Homo sapiens, clone RP11-154H12, complete sequence Length = 162336 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 287 gtcgccggcgccgtcctccc 306 |||||||||||||||||||| Sbjct: 115405 gtcgccggcgccgtcctccc 115386
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 250 cctcgccgccgcgggcgccgtcct 273 |||||||||||||| ||||||||| Sbjct: 7495630 cctcgccgccgcggccgccgtcct 7495607
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ctcgccgccgcgggcgccgt 270 |||||||||||||||||||| Sbjct: 26161798 ctcgccgccgcgggcgccgt 26161779 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 cctcgccgccgcgggcgccg 269 |||||||||||||||||||| Sbjct: 23700579 cctcgccgccgcgggcgccg 23700598 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 agctcgtcgccggcgccgtc 301 |||||||||||||||||||| Sbjct: 21777287 agctcgtcgccggcgccgtc 21777306
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 cgccggcgccgtcctccccg 308 |||||||||||||||||||| Sbjct: 15714808 cgccggcgccgtcctccccg 15714789 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ctcgtcgccggcgccgtcct 303 |||||||||||||||||||| Sbjct: 1231537 ctcgtcgccggcgccgtcct 1231556
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 cctcgccgccgcgggcgccg 269 |||||||||||||||||||| Sbjct: 4116107 cctcgccgccgcgggcgccg 4116088
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 282 agctcgtcgccggcgccgtc 301 |||||||||||||||||||| Sbjct: 3690941 agctcgtcgccggcgccgtc 3690922
>gb|AE004789.1| Pseudomonas aeruginosa PAO1, section 350 of 529 of the complete genome Length = 17124 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 276 ccggcaagctcgtcgccggc 295 |||||||||||||||||||| Sbjct: 16528 ccggcaagctcgtcgccggc 16509
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 188 gtgctcgcggcgctggcgcc 207 |||||||||||||||||||| Sbjct: 1469326 gtgctcgcggcgctggcgcc 1469307 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 gtacctcgccgccgcgggcg 266 |||||||||||||||||||| Sbjct: 568082 gtacctcgccgccgcgggcg 568063
>gb|AC006511.5| Homo sapiens 12 BAC RPCI11-69M1 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186321 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 309 actcctcccgcctccactac 328 |||||||||||||||||||| Sbjct: 122330 actcctcccgcctccactac 122311
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0677H08 Length = 178830 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 agctcgtcgccggcgccgtc 301 |||||||||||||||||||| Sbjct: 18928 agctcgtcgccggcgccgtc 18947
>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534A03 Length = 153170 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 agctcgtcgccggcgccgtc 301 |||||||||||||||||||| Sbjct: 94470 agctcgtcgccggcgccgtc 94489
>dbj|AP004457.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0013B04 Length = 141319 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 agctcgtcgccggcgccgtc 301 |||||||||||||||||||| Sbjct: 56640 agctcgtcgccggcgccgtc 56659
>dbj|AP003456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0542E10 Length = 146196 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 ctcgtcgccggcgccgtcct 303 |||||||||||||||||||| Sbjct: 83490 ctcgtcgccggcgccgtcct 83509
>dbj|AP003520.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021H10 Length = 142659 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 cgccggcgccgtcctccccg 308 |||||||||||||||||||| Sbjct: 50446 cgccggcgccgtcctccccg 50427
>emb|BX842598.1| Neurospora crassa DNA linkage group II BAC clone B8L10 Length = 73541 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 ctcgtcgccggcgccgtcct 303 |||||||||||||||||||| Sbjct: 60222 ctcgtcgccggcgccgtcct 60203
>dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1060_D03 Length = 102178 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 cctcgccgccgcgggcgccg 269 |||||||||||||||||||| Sbjct: 45193 cctcgccgccgcgggcgccg 45212
>gb|AE005037.1| Halobacterium sp. NRC-1 section 68 of 170 of the complete genome Length = 13508 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 185 gacgtgctcgcggcgctggc 204 |||||||||||||||||||| Sbjct: 12613 gacgtgctcgcggcgctggc 12594
>dbj|AP004665.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0429B05 Length = 155024 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 agctcgtcgccggcgccgtc 301 |||||||||||||||||||| Sbjct: 141841 agctcgtcgccggcgccgtc 141860
>dbj|AP004558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0409A07 Length = 146663 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 agctcgtcgccggcgccgtc 301 |||||||||||||||||||| Sbjct: 62927 agctcgtcgccggcgccgtc 62946
>dbj|AK120053.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000K15, full insert sequence Length = 3158 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 cgccggcgccgtcctccccg 308 |||||||||||||||||||| Sbjct: 90 cgccggcgccgtcctccccg 109
>dbj|AK111717.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022A01, full insert sequence Length = 1165 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ctcgccgccgcgggcgccgt 270 |||||||||||||||||||| Sbjct: 285 ctcgccgccgcgggcgccgt 266
>dbj|AK107179.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-H01, full insert sequence Length = 1447 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 289 cgccggcgccgtcctccccg 308 |||||||||||||||||||| Sbjct: 117 cgccggcgccgtcctccccg 136
>emb|AJ341694.1|HSA341694 Homo sapiens genomic sequence surrounding NotI site, clone NL6-LH14R Length = 739 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 tcctccccgactcctcccgc 319 |||||||||||||||||||| Sbjct: 199 tcctccccgactcctcccgc 180
>dbj|AK106218.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-H04, full insert sequence Length = 1017 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 cctcgccgccgcgggcgccg 269 |||||||||||||||||||| Sbjct: 690 cctcgccgccgcgggcgccg 671
>dbj|AK105960.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-E01, full insert sequence Length = 1040 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 cctcgccgccgcgggcgccg 269 |||||||||||||||||||| Sbjct: 796 cctcgccgccgcgggcgccg 777
>emb|AJ340437.1|HSA340437 Homo sapiens genomic sequence surrounding NotI site, clone NL6-DF7R Length = 916 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 tcctccccgactcctcccgc 319 |||||||||||||||||||| Sbjct: 199 tcctccccgactcctcccgc 180
>emb|AJ340426.1|HSA340426 Homo sapiens genomic sequence surrounding NotI site, clone NL6-DF1R Length = 896 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 tcctccccgactcctcccgc 319 |||||||||||||||||||| Sbjct: 199 tcctccccgactcctcccgc 180
>dbj|AK104594.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C11, full insert sequence Length = 1039 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 cctcgccgccgcgggcgccg 269 |||||||||||||||||||| Sbjct: 796 cctcgccgccgcgggcgccg 777
>dbj|AK104264.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-D07, full insert sequence Length = 1037 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 cctcgccgccgcgggcgccg 269 |||||||||||||||||||| Sbjct: 792 cctcgccgccgcgggcgccg 773
>emb|AJ340146.1|HSA340146 Homo sapiens genomic sequence surrounding NotI site, clone NL3-CN4C Length = 670 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 tcctccccgactcctcccgc 319 |||||||||||||||||||| Sbjct: 199 tcctccccgactcctcccgc 180
>dbj|AK103997.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-B11, full insert sequence Length = 1034 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 cctcgccgccgcgggcgccg 269 |||||||||||||||||||| Sbjct: 790 cctcgccgccgcgggcgccg 771
>dbj|AK103268.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033124H02, full insert sequence Length = 2391 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 cctcgccgccgcgggcgccg 269 |||||||||||||||||||| Sbjct: 1053 cctcgccgccgcgggcgccg 1072
>emb|AJ338909.1|HSA338909 Homo sapiens genomic sequence surrounding NotI site, clone NL1-VF8C Length = 859 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 tcctccccgactcctcccgc 319 |||||||||||||||||||| Sbjct: 200 tcctccccgactcctcccgc 181
>dbj|AK071446.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095E01, full insert sequence Length = 1739 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 agctcgtcgccggcgccgtc 301 |||||||||||||||||||| Sbjct: 195 agctcgtcgccggcgccgtc 214
>dbj|AK061578.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-H02, full insert sequence Length = 1126 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 cctcgccgccgcgggcgccg 269 |||||||||||||||||||| Sbjct: 880 cctcgccgccgcgggcgccg 861
>dbj|AK061494.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C05, full insert sequence Length = 1051 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 cctcgccgccgcgggcgccg 269 |||||||||||||||||||| Sbjct: 792 cctcgccgccgcgggcgccg 773
>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0519E12 Length = 152448 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 ctcgccgccgcgggcgccgt 270 |||||||||||||||||||| Sbjct: 53656 ctcgccgccgcgggcgccgt 53637
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 gcgcggcggtggtgctggcc 235 |||||||||||||||||||| Sbjct: 1768207 gcgcggcggtggtgctggcc 1768188
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 250 cctcgccgccgcgggcgccgtcct 273 |||||||||||||| ||||||||| Sbjct: 7565716 cctcgccgccgcggccgccgtcct 7565693
>emb|AL831805.4|CNS08CAI Oryza sativa chromosome 12, . BAC OSJNBa0085J02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 166508 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 ctcgtcgccggcgccgtcct 303 |||||||||||||||||||| Sbjct: 57047 ctcgtcgccggcgccgtcct 57028 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 ctcgtcgccggcgccgtcct 303 |||||||||||||||||||| Sbjct: 51817 ctcgtcgccggcgccgtcct 51798 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,210,243 Number of Sequences: 3902068 Number of extensions: 3210243 Number of successful extensions: 86045 Number of sequences better than 10.0: 129 Number of HSP's better than 10.0 without gapping: 134 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 79610 Number of HSP's gapped (non-prelim): 6435 length of query: 472 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 450 effective length of database: 17,147,199,772 effective search space: 7716239897400 effective search space used: 7716239897400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
