>FLA7_ARATH (Q9SJ81) Fasciclin-like arabinogalactan protein 7 precursor|
          Length = 254

 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 28/84 (33%), Positives = 46/84 (54%)
 Frame = +3

Query: 213 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSL 392
           N+T +L  AG +  F+  + ST        QAN ++ G T+F P D+AF + K   L++L
Sbjct: 46  NLTELLSVAGPFHTFLDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNL 105

Query: 393 SQQDQVTLVQAHIVPTFYSMESFE 464
           ++     LV  H +P +YS+  F+
Sbjct: 106 TKDQLKQLVLFHALPHYYSLSEFK 129

>FLA8_ARATH (O22126) Fasciclin-like arabinogalactan protein 8 precursor|
           (AtAGP8)
          Length = 420

 Score = 45.1 bits (105), Expect = 9e-05
 Identities = 30/89 (33%), Positives = 47/89 (52%)
 Frame = +3

Query: 201 AAAPNVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGT 380
           A+  N+T +LEKAG  T F  L+ S+     L    +  + G TVFAP+D AF +     
Sbjct: 185 ASLSNITGLLEKAGCKT-FANLLVSSGV---LKTYESAVEKGLTVFAPSDEAFKAEGVPD 240

Query: 381 LNSLSQQDQVTLVQAHIVPTFYSMESFET 467
           L  L+Q + V+L++ H +  +    S +T
Sbjct: 241 LTKLTQAEVVSLLEYHALAEYKPKGSLKT 269

>FLA10_ARATH (Q9LZX4) Fasciclin-like arabinogalactan protein 10 precursor|
          Length = 422

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 29/89 (32%), Positives = 47/89 (52%)
 Frame = +3

Query: 201 AAAPNVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGT 380
           A   N+T +LEKAG  T F  L+ S+     +    +  + G TVFAP+D AF +     
Sbjct: 186 AGVSNITGLLEKAGCKT-FANLLVSSGV---IKTFESTVEKGLTVFAPSDEAFKARGVPD 241

Query: 381 LNSLSQQDQVTLVQAHIVPTFYSMESFET 467
           L +L+Q + V+L++ H +  +    S +T
Sbjct: 242 LTNLTQAEVVSLLEYHALAEYKPKGSLKT 270

>Y1483_SYNY3 (P74615) Hypothetical protein sll1483 precursor|
          Length = 180

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
 Frame = +3

Query: 201 AAAPNVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGT 380
           AA  +   ++E A     F  L+A+ +    + A + E    FTVFAPT++AF +L  GT
Sbjct: 40  AATDSAMTIVEVAAGNETFSTLVAAVKAADLVEALSAEGP--FTVFAPTNDAFAALPAGT 97

Query: 381 LNSL----SQQDQVTLVQAHIVP 437
           + SL    ++   V ++  H+VP
Sbjct: 98  VESLLLPENKDKLVKILTYHVVP 120

>YH35_SYNP2 (O33752) Hypothetical protein sll1735 homolog|
          Length = 133

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 22/48 (45%), Positives = 28/48 (58%)
 Frame = +3

Query: 255 FIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSLSQ 398
           F  L+A+ Q    +   A E D  FTVFAP D+AF  L PGT+ +L Q
Sbjct: 14  FSTLVAAVQAAGLVETLAGEGD--FTVFAPNDDAFAKLPPGTIQTLVQ 59

>STAB2_HUMAN (Q8WWQ8) Stabilin-2 precursor (FEEL-2 protein) (Fasciclin EGF-like|
           laminin-type EGF-like and link domain-containing
           scavenger receptor 1) (FAS1 EGF-like and X-link
           domain-containing adhesion molecule 2) (Hyaluronan
           receptor for endocytosis) [
          Length = 2551

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
 Frame = +3

Query: 243 QYTKFIRLMASTQQDTQLNAQANESDTG--FTVFAPTDNAFNSLKPGTLNSL----SQQD 404
           +Y+KF  L+    ++T L    +E   G  +T+F P + A N++K GTL+ L      + 
Sbjct: 527 RYSKFRSLL----EETNLGHALDEDGVGGPYTIFVPNNEALNNMKDGTLDYLLSPEGSRK 582

Query: 405 QVTLVQAHIVP 437
            + LV+ HIVP
Sbjct: 583 LLELVRYHIVP 593

>Y1735_SYNY3 (P73392) Hypothetical protein sll1735|
          Length = 133

 Score = 36.6 bits (83), Expect = 0.033
 Identities = 17/29 (58%), Positives = 20/29 (68%)
 Frame = +3

Query: 312 ESDTGFTVFAPTDNAFNSLKPGTLNSLSQ 398
           +S   FTVFAPTD AF  L PGT+ +L Q
Sbjct: 31  QSPGPFTVFAPTDTAFAKLPPGTITTLVQ 59

>STAB2_RAT (Q8CFM6) Stabilin-2 precursor (Hyaluronan receptor for endocytosis)|
           [Contains: 175 kDa stabilin-2 (175 kDa hyaluronan
           receptor for endocytosis)] (Fragment)
          Length = 1431

 Score = 34.3 bits (77), Expect = 0.16
 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
 Frame = +3

Query: 213 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANES-DTGFTVFAPTDNAFNSLKPGTLNS 389
           N+T V    G YTKF +L+    QD+ L +   +S  T  TVF PTD A  +L P   + 
Sbjct: 607 NLTTVAANHG-YTKFSKLI----QDSGLLSVITDSIHTPVTVFWPTDKALEALPPEQQDF 661

Query: 390 LSQQDQVTLVQAHI 431
           L  QD    +++++
Sbjct: 662 LFNQDNKDKLKSYL 675

>MP70_MYCTU (P0A668) Immunogenic protein MPT70 precursor|
          Length = 193

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
 Frame = +3

Query: 291 QLNAQANESDT----GFTVFAPTDNAFNSLKPGTLNSLSQQDQV--TLVQAHIV 434
           QLN Q N  DT     +TVFAPT+ AF+ L   T++ L     +  +++  H+V
Sbjct: 80  QLNPQVNLVDTLNSGQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVV 133

>MP70_MYCBO (P0A669) Immunogenic protein MPB70 precursor|
          Length = 193

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
 Frame = +3

Query: 291 QLNAQANESDT----GFTVFAPTDNAFNSLKPGTLNSLSQQDQV--TLVQAHIV 434
           QLN Q N  DT     +TVFAPT+ AF+ L   T++ L     +  +++  H+V
Sbjct: 80  QLNPQVNLVDTLNSGQYTVFAPTNAAFSKLPASTIDELKTNSSLLTSILTYHVV 133

>BGH3_RABIT (Q95215) Transforming growth factor-beta-induced protein ig-h3|
           precursor (Beta ig-h3) (Kerato-epithelin)
           (RGD-containing collagen-associated protein) (RGD-CAP)
          Length = 683

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = +3

Query: 327 FTVFAPTDNAFNSLKPGTLNSL 392
           +TVFAPT+ AF +L PG LN L
Sbjct: 537 YTVFAPTNEAFQALPPGELNKL 558

>CROC_DROME (P32027) Fork head domain protein crocodile (FKH protein FD1)|
          Length = 508

 Score = 32.3 bits (72), Expect = 0.63
 Identities = 19/64 (29%), Positives = 28/64 (43%)
 Frame = +2

Query: 245 VHQVHPADGVDAAGHAAERAGQRVGHGLHGVRPHRQRLQQPQAGHPQLALAAGPGDARAG 424
           +H VH A    AA H A++  + V H  H + P  Q      +GH    ++   G A  G
Sbjct: 295 MHHVHHA----AAAHHAQQLQRHVAHVAHPLTPGGQGAGGQSSGHSPTTISTPHGPAHGG 350

Query: 425 AHRP 436
            + P
Sbjct: 351 WYTP 354

>MP70_MYCKA (Q49614) Immunogenic protein MPT70 analog precursor (Fragment)|
          Length = 121

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
 Frame = +3

Query: 291 QLNAQANESDT----GFTVFAPTDNAFNSLKPGTLNSL 392
           +LN Q N  DT     +TVFAPTD AF+ L   T+  L
Sbjct: 78  RLNPQVNLVDTLNNGQYTVFAPTDPAFDKLPASTIVQL 115

>TAU_HYLLA (Q5YCV9) Microtubule-associated protein tau|
          Length = 775

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 24/79 (30%), Positives = 30/79 (37%), Gaps = 15/79 (18%)
 Frame = +2

Query: 275 DAAGHAAER--AGQRVGHGLHGVRPHRQRLQQPQAGHPQLAL-------------AAGPG 409
           +AAGH  +   +G+ V  G  G    R    Q  +G P   L               GP 
Sbjct: 116 EAAGHVTQEPESGKVVREGFLGEPGPRSXSHQLASGMPGAPLLPEGPREATRQPSGTGPE 175

Query: 410 DARAGAHRPHLLLHGVLRD 466
           D   G H P LL H +L D
Sbjct: 176 DTEGGRHAPELLKHQLLGD 194

>POSTN_HUMAN (Q15063) Periostin precursor (PN) (Osteoblast-specific factor 2)|
           (OSF-2)
          Length = 836

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +3

Query: 318 DTGFTVFAPTDNAFNSLKPGTLNSLSQQDQV---TLVQAHIVPTFYSMES 458
           D  FT+FAPT+ AF  L  G L  +   D+V    L++ HI+ T    ES
Sbjct: 266 DGHFTLFAPTNEAFEKLPRGVLERI-MGDKVASEALMKYHILNTLQCSES 314

>BGH3_MOUSE (P82198) Transforming growth factor-beta-induced protein ig-h3|
           precursor (Beta ig-h3)
          Length = 683

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
 Frame = +3

Query: 210 PNVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNS 389
           P +  V++      +F  L+A+ Q    +     E    +TVFAPT+ AF ++ P  LN 
Sbjct: 500 PPMGTVMDVLKGDNRFSMLVAAIQSAGLMEILNREGV--YTVFAPTNEAFQAMPPEELNK 557

Query: 390 L--SQQDQVTLVQAHI 431
           L  + ++   +++ HI
Sbjct: 558 LLANAKELTNILKYHI 573



 Score = 29.3 bits (64), Expect = 5.3
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +3

Query: 312 ESDTGFTVFAPTDNAFNSLKPGTLNSLSQQDQVTLVQA 425
           E    FT+FAP++ A++SL    L+SL     + L+ A
Sbjct: 133 EGPGSFTIFAPSNEAWSSLPAEVLDSLVSNVNIELLNA 170



 Score = 28.5 bits (62), Expect = 9.1
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = +3

Query: 213 NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSL 392
           N+  ++E    +      +A++  +T L     E D  FT+ APT+ AF  +   TLN +
Sbjct: 242 NIQQIIEIEDTFETLRAAVAASGLNTVL-----EGDGQFTLLAPTNEAFEKIPAETLNRI 296

>STAB1_MOUSE (Q8R4Y4) Stabilin-1 precursor (FEEL-1 protein)|
          Length = 2571

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 4/86 (4%)
 Frame = +3

Query: 213  NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSL 392
            NVTA  E  G Y  F RL+        L    + S   FT+  PTD+A  +L P   N L
Sbjct: 1728 NVTAAAESFG-YKIFSRLLTVAGLLPMLQ---DASHRPFTMLWPTDSALQALPPDRKNWL 1783

Query: 393  SQQDQ----VTLVQAHIVPTFYSMES 458
              +D       +++ H++    ++ S
Sbjct: 1784 FHEDHRDKLAAILRGHMIRNIEALAS 1809

>VPS33_YEAST (P20795) Vacuolar protein sorting 33 (SLP1 protein)|
          Length = 691

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 378 TLNSLSQQDQVTLVQAHIVPTFYSMESFE 464
           TLN +SQ D+V +VQ  ++P   S+ +F+
Sbjct: 21  TLNEISQNDEVLVVQPSVLPVLNSLLTFQ 49

>POSTN_MOUSE (Q62009) Periostin precursor (PN) (Osteoblast-specific factor 2)|
           (OSF-2)
          Length = 838

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
 Frame = +3

Query: 318 DTGFTVFAPTDNAFNSLKPGTLNSLSQQDQV---TLVQAHIVPTFYSMES 458
           D  FT+FAPT+ AF  L  G L  +   D+V    L++ HI+ T    E+
Sbjct: 268 DGHFTLFAPTNEAFEKLPRGVLERI-MGDKVASEALMKYHILNTLQCSEA 316

>STAB2_MOUSE (Q8R4U0) Stabilin-2 precursor [Contains: Short form stabilin-2]|
          Length = 2559

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 22/73 (30%), Positives = 34/73 (46%)
 Frame = +3

Query: 213  NVTAVLEKAGQYTKFIRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSL 392
            N+T V    G YTKF +L+   Q    L    +   T  T+F PTD A  +L     + L
Sbjct: 1750 NLTTVAANHG-YTKFSKLI---QDSGLLKVITDPMHTPVTLFWPTDKALQALPQEQQDFL 1805

Query: 393  SQQDQVTLVQAHI 431
              +D    ++A++
Sbjct: 1806 FNEDNKDKLKAYL 1818

>MP83_MYCTU (P0A670) Cell surface lipoprotein MPT83 precursor (Lipoprotein p23)|
          Length = 220

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
 Frame = +3

Query: 291 QLNAQANESDT----GFTVFAPTDNAFNSLKPGTLNSLSQQDQV--TLVQAHIV 434
           +LN   N  DT     +TVFAPT+ AF+ L   T++ L    ++  +++  H++
Sbjct: 106 KLNPDVNLVDTLNGGEYTVFAPTNAAFDKLPAATIDQLKTDAKLLSSILTYHVI 159

>MP83_MYCBO (P0A671) Cell surface lipoprotein MPB83 precursor (Lipoprotein p23)|
          Length = 220

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
 Frame = +3

Query: 291 QLNAQANESDT----GFTVFAPTDNAFNSLKPGTLNSLSQQDQV--TLVQAHIV 434
           +LN   N  DT     +TVFAPT+ AF+ L   T++ L    ++  +++  H++
Sbjct: 106 KLNPDVNLVDTLNGGEYTVFAPTNAAFDKLPAATIDQLKTDAKLLSSILTYHVI 159

>HNRPU_HUMAN (Q00839) Heterogenous nuclear ribonucleoprotein U (hnRNP U)|
           (Scaffold attachment factor A) (SAF-A) (p120) (pp120)
          Length = 824

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 17/46 (36%), Positives = 20/46 (43%)
 Frame = +2

Query: 266 DGVDAAGHAAERAGQRVGHGLHGVRPHRQRLQQPQAGHPQLALAAG 403
           +G D  G   E AG   GHG    +P   + QQPQ        AAG
Sbjct: 140 EGEDELGDEEEGAGDENGHGEQQPQPPATQQQQPQQQRGAAKEAAG 185

>NPBL_MOUSE (Q6KCD5) Nipped-B-like protein (Delangin homolog) (SCC2 homolog)|
          Length = 2798

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 11/81 (13%)
 Frame = +3

Query: 258 IRLMASTQQDTQL----NAQANESDTGFTVFAPTDNAFNSLKPGTLNS-------LSQQD 404
           +R     QQD  L    N+  +E+D  F V  P   +   + P  +N        LSQQ+
Sbjct: 365 VRSSDMDQQDDMLSGMENSNVSENDIPFNVQYPGQTSKTPITPQDVNRPLNAAQCLSQQE 424

Query: 405 QVTLVQAHIVPTFYSMESFET 467
           Q   + A+ VP      S  T
Sbjct: 425 QTAFLPANQVPVLQQNTSVAT 445

>IF2_CORGL (Q8NP40) Translation initiation factor IF-2|
          Length = 1004

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
 Frame = +2

Query: 299 RAGQRVGHGLHGVRPHR----QRLQQPQAGHPQLALAAGPGDARAGAHRP 436
           R GQR G G  G RP      Q   +PQ G  Q A  A   + + G  RP
Sbjct: 263 RGGQRQGAGAGGPRPQGGPRPQGGSRPQGGSAQGAQGAPSQERQGGGRRP 312

>RPA1_DROME (P91875) DNA-directed RNA polymerase I largest subunit (EC 2.7.7.6)|
          Length = 1642

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 15/59 (25%), Positives = 24/59 (40%)
 Frame = +3

Query: 258 IRLMASTQQDTQLNAQANESDTGFTVFAPTDNAFNSLKPGTLNSLSQQDQVTLVQAHIV 434
           +R M     D    A   +   GFT + P DNA        L   + +D + +V  H++
Sbjct: 462 LRKMVMNGPDVHPGANYIQDKNGFTTYIPADNASKRESLAKLLLSNPKDGIKIVHRHVL 520

>MTCD_TETTH (Q8WSW3) Cadmium metallothionein precursor (MT-Cd) (Cd-MT)|
          Length = 162

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 14/53 (26%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
 Frame = -2

Query: 427 CACTSVTWSCCESELRVPGLRLLKALS-VGANTVKPVSDSLACAFSCVSCCVD 272
           C C S T +CC+S+ +       +          KPV     C     +CC D
Sbjct: 80  CCCVSKTNNCCKSDTKECCTGTGEGCKCTSCQCCKPVQQGCCCGDKAKACCTD 132


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,741,968
Number of Sequences: 219361
Number of extensions: 465025
Number of successful extensions: 2115
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2108
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)