ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast75f01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1OLIG3_HUMAN (Q7RTU3) Oligodendrocyte transcription factor 3 (Oli... 33 0.21
2CIC_DROME (Q9U1H0) Putative transcription factor capicua (Protei... 33 0.21
3NQRA_NEIMB (Q9K0M3) Na(+)-translocating NADH-quinone reductase s... 32 0.47
4NQRA_HAEIN (P43955) Na(+)-translocating NADH-quinone reductase s... 32 0.61
5NQRA_NEIMA (Q9JVP8) Na(+)-translocating NADH-quinone reductase s... 32 0.80
6CN004_HUMAN (Q9H1B7) Protein C14orf4 30 1.8
7NQRA_RHOBA (Q7UWS5) Na(+)-translocating NADH-quinone reductase s... 30 1.8
8CN004_MOUSE (Q8K3X4) Protein C14orf4 homolog 30 2.3
9MPPB_ARATH (Q42290) Probable mitochondrial-processing peptidase ... 30 2.3
10ZO1_MOUSE (P39447) Tight junction protein ZO-1 (Zonula occludens... 30 2.3
11CAR14_HUMAN (Q9BXL6) Caspase recruitment domain-containing prote... 30 3.0
12RAIN_MOUSE (Q3U0S6) Ras-interacting protein 1 (Rain) 29 3.9
13HD_FUGRU (P51112) Huntingtin (Huntington disease protein homolog... 29 3.9
14POLS_SFV (P03315) Structural polyprotein (p130) [Contains: Capsi... 29 5.2
15TGIF2_MOUSE (Q8C0Y1) Homeobox protein TGIF2 (TGFB-induced factor... 29 5.2
16TEAD3_CHICK (Q90701) Transcriptional enhancer factor TEF-5 (TEA ... 29 5.2
17GCYA1_BOVIN (P19687) Guanylate cyclase soluble subunit alpha-1 (... 28 6.7
18YLPM1_HUMAN (P49750) YLP motif-containing protein 1 (Nuclear pro... 28 6.7
19BMP3_HUMAN (P12645) Bone morphogenetic protein 3 precursor (BMP-... 28 6.7
20PTPA1_NEUCR (Q7S6M5) Serine/threonine-protein phosphatase 2A act... 28 6.7
21SAS_DROME (Q04164) Putative epidermal cell surface receptor prec... 28 6.7
22TAMI_POVHA (P03079) Middle T antigen 28 6.7
23RAIN_HUMAN (Q5U651) Ras-interacting protein 1 (Rain) 28 6.7
24H15_DROME (Q94890) T-box protein H15 23 8.3
25YOQ5_CAEEL (P34643) Hypothetical protein ZK512.5 28 8.8
26OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid) 28 8.8
27NGB2_ONCMY (P59743) Neuroglobin 2 28 8.8
28CCNA_CHLVR (P51986) G2/mitotic-specific cyclin-A (Fragment) 28 8.8
29E75BB_DROME (P13055) Ecdysone-induced protein 75B isoform B (E75-C) 28 8.8
30PKAA_STRCO (P54739) Serine/threonine protein kinase pkaA (EC 2.7... 28 8.8
31UBE4B_MOUSE (Q9ES00) Ubiquitin conjugation factor E4 B (Ubiquiti... 28 8.8
32GGPPS_GIBFU (Q92236) Geranylgeranyl pyrophosphate synthetase (GG... 28 8.8

>OLIG3_HUMAN (Q7RTU3) Oligodendrocyte transcription factor 3 (Oligo3) (Basic|
           helix-loop-helix domain-containing class B protein 7)
          Length = 272

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 38/132 (28%), Positives = 50/132 (37%), Gaps = 2/132 (1%)
 Frame = +3

Query: 6   HHSAYRCPSRSEGTGERGSDRPAMRKTVVGSAST--GGGWPCGLNLNVVFLLSMVATNLL 179
           HHSA+ C     GT    +  PA     V       GG    G   + +   S+ A   +
Sbjct: 155 HHSAFHC-----GTVGHSAGHPAHAANSVHPVHPILGGALSSGNASSPLSAASLPAIGTI 209

Query: 180 SLYHLSIRASPTTPALQSGSDFDQQQVLQQLSAIRATVSHLRSATPPPPPELVLYSRLAP 359
              H  ++A  T PALQ GS F     L        T+  +     PPPP L   S  A 
Sbjct: 210 RPPHSLLKAPSTPPALQLGSGFQHWAGL----PCPCTICQM-----PPPPHLSALS-TAN 259

Query: 360 VASACSAHPDLL 395
           +A   +   DLL
Sbjct: 260 MARLSAESKDLL 271



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>CIC_DROME (Q9U1H0) Putative transcription factor capicua (Protein fettucine)|
          Length = 1403

 Score = 33.5 bits (75), Expect = 0.21
 Identities = 24/99 (24%), Positives = 38/99 (38%)
 Frame = +3

Query: 102 STGGGWPCGLNLNVVFLLSMVATNLLSLYHLSIRASPTTPALQSGSDFDQQQVLQQLSAI 281
           +    W  G N N     +  AT+ +    L  + +P +  + +     QQQ LQQ    
Sbjct: 112 NNNSNWEVGSNSNTHVAATAAATSTVGAQPLPPQTTPVSLVMHAPPP--QQQPLQQ---- 165

Query: 282 RATVSHLRSATPPPPPELVLYSRLAPVASACSAHPDLLH 398
                H     PPPPP  +      P + + S+H  + H
Sbjct: 166 ----QHHHHQPPPPPPASLPAPSAPPTSGSSSSHNSVGH 200



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>NQRA_NEIMB (Q9K0M3) Na(+)-translocating NADH-quinone reductase subunit A (EC|
           1.6.5.-) (Na(+)-translocating NQR subunit A) (Na(+)-NQR
           subunit A) (NQR complex subunit A) (NQR-1 subunit A)
          Length = 447

 Score = 32.3 bits (72), Expect = 0.47
 Identities = 15/37 (40%), Positives = 24/37 (64%)
 Frame = -2

Query: 145 TTLRFRPHGQPPPVEAEPTTVFLIAGRSDPLSPVPSL 35
           T LR RP  + P V+AEP  +F+ A  ++PL+  P++
Sbjct: 129 TALRTRPFSKIPAVDAEPFAIFVNAMDTNPLAADPTV 165



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>NQRA_HAEIN (P43955) Na(+)-translocating NADH-quinone reductase subunit A (EC|
           1.6.5.-) (Na(+)-translocating NQR subunit A) (Na(+)-NQR
           subunit A) (NQR complex subunit A) (NQR-1 subunit A)
          Length = 447

 Score = 32.0 bits (71), Expect = 0.61
 Identities = 14/37 (37%), Positives = 25/37 (67%)
 Frame = -2

Query: 145 TTLRFRPHGQPPPVEAEPTTVFLIAGRSDPLSPVPSL 35
           T LR RP  + P +E+E +++F+ A  ++PL+  PS+
Sbjct: 129 TALRTRPFSKVPSIESEASSIFVNAMDTNPLAADPSV 165



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>NQRA_NEIMA (Q9JVP8) Na(+)-translocating NADH-quinone reductase subunit A (EC|
           1.6.5.-) (Na(+)-translocating NQR subunit A) (Na(+)-NQR
           subunit A) (NQR complex subunit A) (NQR-1 subunit A)
          Length = 447

 Score = 31.6 bits (70), Expect = 0.80
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = -2

Query: 145 TTLRFRPHGQPPPVEAEPTTVFLIAGRSDPLSPVP 41
           T LR RP  + P V+AEP  +F+ A  ++PL+  P
Sbjct: 129 TALRTRPFSKIPAVDAEPFAIFVNAMDTNPLAADP 163



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>CN004_HUMAN (Q9H1B7) Protein C14orf4|
          Length = 796

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 15/85 (17%)
 Frame = +3

Query: 201 RASPTTP-----ALQSGSDFDQQQ-VLQQLSAIRATVS--------HLRSATPPPPPELV 338
           +ASP  P     AL+ G +  +QQ +  Q  A++ T+S        H     PPPPP L 
Sbjct: 545 KASPEPPDSAEGALKLGEEQQRQQWMANQSEALKLTMSAGGFAAPGHAAGGPPPPPPPLG 604

Query: 339 LYS-RLAPVASACSAHPDLLHRFMT 410
            +S R  P  SA    P  +   M+
Sbjct: 605 PHSNRTTPPESAPQNGPSPMAALMS 629



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>NQRA_RHOBA (Q7UWS5) Na(+)-translocating NADH-quinone reductase subunit A (EC|
           1.6.5.-) (Na(+)-translocating NQR subunit A) (Na(+)-NQR
           subunit A) (NQR complex subunit A) (NQR-1 subunit A)
          Length = 456

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 12/37 (32%), Positives = 24/37 (64%)
 Frame = -2

Query: 145 TTLRFRPHGQPPPVEAEPTTVFLIAGRSDPLSPVPSL 35
           +  R RP G+ P +E+ P ++F+ A  ++PL+  P++
Sbjct: 137 SAFRTRPFGKVPTIESRPHSIFVTAIDTNPLAADPAV 173



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>CN004_MOUSE (Q8K3X4) Protein C14orf4 homolog|
          Length = 775

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 15/85 (17%)
 Frame = +3

Query: 201 RASPTTP-----ALQSGSDFDQQQ-VLQQLSAIRATVS--------HLRSATPPPPPELV 338
           +ASP  P     AL+ G +  +QQ +  Q  A++ T+S        H     PPPPP L 
Sbjct: 524 KASPEPPDSAESALKLGEEQQRQQWMANQSEALKLTMSAGGFAAPGHSAGGPPPPPPPLG 583

Query: 339 LYS-RLAPVASACSAHPDLLHRFMT 410
            +S R  P  SA    P  +   M+
Sbjct: 584 PHSNRTTPPESAPQNGPSPMAALMS 608



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>MPPB_ARATH (Q42290) Probable mitochondrial-processing peptidase beta subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Beta-MPP)
          Length = 531

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 23/68 (33%), Positives = 31/68 (45%)
 Frame = +3

Query: 159 MVATNLLSLYHLSIRASPTTPALQSGSDFDQQQVLQQLSAIRATVSHLRSATPPPPPELV 338
           M   NLLSL   S R    T A +S S F        + ++ A+ S   +A  PPPP L+
Sbjct: 1   MAMKNLLSLARRSQRRLFLTQATRSSSSFSA------IDSVPASASP--TALSPPPPHLM 52

Query: 339 LYSRLAPV 362
            Y   A +
Sbjct: 53  PYDHAAEI 60



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>ZO1_MOUSE (P39447) Tight junction protein ZO-1 (Zonula occludens 1 protein)|
            (Zona occludens 1 protein) (Tight junction protein 1)
          Length = 1745

 Score = 30.0 bits (66), Expect = 2.3
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = +3

Query: 309  ATPPPPPELVLYSRLAPVASACSAH 383
            ATPPPPP    YS+ AP  S+ S H
Sbjct: 1422 ATPPPPPLPSQYSQPAPPLSSSSLH 1446



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>CAR14_HUMAN (Q9BXL6) Caspase recruitment domain-containing protein 14|
           (CARD-containing MAGUK protein 2) (Carma 2)
          Length = 1004

 Score = 29.6 bits (65), Expect = 3.0
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +3

Query: 249 QQQVLQQLSAI--RATVSHLRSATPPPPPELVLYSRLA 356
           + Q+L  LSA   R  V   RS++P PP +  LY R+A
Sbjct: 452 ESQLLSDLSATSSRELVDSFRSSSPAPPSQQSLYKRVA 489



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>RAIN_MOUSE (Q3U0S6) Ras-interacting protein 1 (Rain)|
          Length = 961

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 21/79 (26%), Positives = 32/79 (40%)
 Frame = +3

Query: 180 SLYHLSIRASPTTPALQSGSDFDQQQVLQQLSAIRATVSHLRSATPPPPPELVLYSRLAP 359
           S+Y+L+     T PAL   + F     L    A       L +  P   P L ++     
Sbjct: 701 SVYYLTKTLYSTLPALLDSNPFTAGAELPGPGA------ELEAMPPGLRPTLGVFQAALE 754

Query: 360 VASACSAHPDLLHRFMTYV 416
           + S C  HPDL+ +   Y+
Sbjct: 755 LTSQCELHPDLVSQTFGYL 773



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>HD_FUGRU (P51112) Huntingtin (Huntington disease protein homolog) (HD protein)|
          Length = 3148

 Score = 29.3 bits (64), Expect = 3.9
 Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 14/68 (20%)
 Frame = +3

Query: 231  SGSDFDQQQVLQQLSAIRATVS-----------HLRSATPPPPPELVLYSR---LAPVAS 368
            SG     Q+    L   RATVS           H     PPP PELV+  +   +A V S
Sbjct: 2052 SGLAQRHQRFYSLLDRFRATVSDTSSPSTPVTSHPLDGDPPPAPELVIADKEWYVALVKS 2111

Query: 369  ACSAHPDL 392
             C  H D+
Sbjct: 2112 QCCLHGDV 2119



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>POLS_SFV (P03315) Structural polyprotein (p130) [Contains: Capsid protein|
           (EC 3.4.21.-) (Coat protein) (C); p62 (E3/E2); E3
           protein (Spike glycoprotein E3); E2 envelope
           glycoprotein (Spike glycoprotein E2); 6K protein; E1
           envelope glycoprotein (Spike gly
          Length = 1253

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +3

Query: 198 IRASPTTPALQSGSDFDQQQVLQQLSAIRATVSHLRSATPPPPPE 332
           ++A+P  P +    DF  QQ+ Q +SA+ A      +  P  PP+
Sbjct: 25  LQATPVAPVVP---DFQAQQMQQLISAVNALTMRQNAIAPARPPK 66



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>TGIF2_MOUSE (Q8C0Y1) Homeobox protein TGIF2 (TGFB-induced factor 2)|
           (5'-TG-3'-interacting factor 2) (TGF(beta)-induced
           transcription factor 2)
          Length = 237

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +3

Query: 210 PTTPALQSGSDFDQQQVLQQLSAIRATVSHLRSATPPPPPEL 335
           P TP  Q   DF   Q+L +++  RA    L+    P PP L
Sbjct: 184 PPTPPEQDKDDFSSFQLLVEVALQRAAEMELQKQQEPAPPLL 225



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>TEAD3_CHICK (Q90701) Transcriptional enhancer factor TEF-5 (TEA domain family|
           member 3) (TEAD-3) (Cardiac-enriched TEA domain
           transcription factor 1) (DTEF-1)
          Length = 433

 Score = 28.9 bits (63), Expect = 5.2
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = +3

Query: 315 PPPPPELVLYSRLAPVASACSAHP 386
           PP PP L  Y  LAP+  A SA P
Sbjct: 188 PPMPPSLASYEPLAPLPPAASAVP 211



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>GCYA1_BOVIN (P19687) Guanylate cyclase soluble subunit alpha-1 (EC 4.6.1.2)|
           (GCS-alpha-1) (Soluble guanylate cyclase large subunit)
          Length = 691

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 297 HLRSATPPPPPELVLYSRLAPVASACSAHP 386
           H+RSA P PPP   + S + P +  C   P
Sbjct: 259 HIRSARPHPPPGKPVSSLVIPASLFCKTFP 288



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>YLPM1_HUMAN (P49750) YLP motif-containing protein 1 (Nuclear protein ZAP3)|
           (ZAP113)
          Length = 1951

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 11/54 (20%)
 Frame = +3

Query: 252 QQVLQQLSAIRATVSHLRSATPPP-----------PPELVLYSRLAPVASACSA 380
           QQ+LQQ   I     H+++ TPPP           PP+L      APV  A S+
Sbjct: 413 QQILQQYQQIIQPPPHIQATTPPPGIPPPGVPQGIPPQLT----AAPVPPASSS 462



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>BMP3_HUMAN (P12645) Bone morphogenetic protein 3 precursor (BMP-3)|
           (Osteogenin) (BMP-3A)
          Length = 472

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
 Frame = +3

Query: 69  PAMRKTVVGSASTGGGWPCGLNLNVVFLLSMVATNLLSLY--HLSIRASPTTPALQSGSD 242
           P +RK V G  + GGG    L          V+ ++L LY  + +++A+ T  +L+ GS 
Sbjct: 30  PELRKAVPGDRTAGGGPDSELQPQ-----DKVSEHMLRLYDRYSTVQAARTPGSLEGGSQ 84

Query: 243 FDQQQVLQQLSAIRA 287
             + ++L++ + +R+
Sbjct: 85  PWRPRLLREGNTVRS 99



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>PTPA1_NEUCR (Q7S6M5) Serine/threonine-protein phosphatase 2A activator 1 (EC|
           5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-1)
           (PPIase PTPA-1) (Rotamase PTPA-1) (Phosphotyrosyl
           phosphatase activator 1)
          Length = 617

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 17/52 (32%), Positives = 24/52 (46%)
 Frame = +3

Query: 198 IRASPTTPALQSGSDFDQQQVLQQLSAIRATVSHLRSATPPPPPELVLYSRL 353
           I+ S T    +  +D  QQQ  QQ    +A     +   PPPPP   L ++L
Sbjct: 78  IKKSTTVSTSEPTTDGQQQQQQQQQRQQKAEEVDEQQQPPPPPPTDALAAKL 129



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>SAS_DROME (Q04164) Putative epidermal cell surface receptor precursor (Stranded|
            at second protein)
          Length = 1693

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -2

Query: 127  PHGQPPPVEAEPTTVFLIAGRSDPLSPV 44
            P G+PPPV    + +F I G   P  PV
Sbjct: 1083 PQGKPPPVPTSQSDLFNILGAEQPGHPV 1110



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>TAMI_POVHA (P03079) Middle T antigen|
          Length = 401

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
 Frame = +3

Query: 216 TPALQSGSDFDQQQVLQQLSAIRATVSHLRSATPP----PPPELVLYSRLAPV 362
           T    +G  F    +L + S  + +  H +  +PP    PPP L L+   APV
Sbjct: 228 TSRRNTGKSFSLSGMLMRTSPAKKSYHHQKMNSPPGIPIPPPPLFLFPVTAPV 280



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>RAIN_HUMAN (Q5U651) Ras-interacting protein 1 (Rain)|
          Length = 963

 Score = 28.5 bits (62), Expect = 6.7
 Identities = 21/79 (26%), Positives = 32/79 (40%)
 Frame = +3

Query: 180 SLYHLSIRASPTTPALQSGSDFDQQQVLQQLSAIRATVSHLRSATPPPPPELVLYSRLAP 359
           S+Y+L+     T PAL   + F     L    A       L +  P   P L ++     
Sbjct: 703 SVYYLTKTLYSTLPALLDSNPFTAGAELPGPGA------ELGAMPPGLRPTLGVFQAALE 756

Query: 360 VASACSAHPDLLHRFMTYV 416
           + S C  HPDL+ +   Y+
Sbjct: 757 LTSQCELHPDLVSQTFGYL 775



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>H15_DROME (Q94890) T-box protein H15|
          Length = 660

 Score = 23.5 bits (49), Expect(2) = 8.3
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +3

Query: 312 TPPPPPELVLYSRLAPVASACSAHPDLLHR 401
           TPPP   +   +   P +S  SA PDL  R
Sbjct: 600 TPPPSMAVAPPAPATPTSSCGSASPDLRAR 629



 Score = 23.1 bits (48), Expect(2) = 8.3
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +3

Query: 303 RSATPPPPP 329
           RSA PPPPP
Sbjct: 548 RSAAPPPPP 556



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>YOQ5_CAEEL (P34643) Hypothetical protein ZK512.5|
          Length = 1232

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
 Frame = +3

Query: 204  ASPTTPALQSGSD-FDQQQVLQQLSAIRATVSHLRSATPPPP---PELVLYSRLA 356
            A+PT P++ +         VLQQ +  +A++ + ++  PP P   PEL L  R A
Sbjct: 1025 ANPTAPSVPTPPPAVSSAPVLQQATLGQASIPNAKTTAPPVPQKQPELALNERKA 1079



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>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)|
          Length = 2716

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 14/40 (35%), Positives = 18/40 (45%)
 Frame = +3

Query: 210 PTTPALQSGSDFDQQQVLQQLSAIRATVSHLRSATPPPPP 329
           P  P +  G    QQ   QQ S   ++ S+    TPPP P
Sbjct: 562 PPHPGMPGGPPQQQQSQQQQASNSASSASNSPQQTPPPAP 601



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>NGB2_ONCMY (P59743) Neuroglobin 2|
          Length = 159

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = +3

Query: 174 LLSLYHLSIRASPTTPALQSGSDFDQQQVLQQLSAIRATVSHL 302
           LL+L+H +   SPT   L S    D   V + +  I A VSHL
Sbjct: 41  LLNLFHYNTNCSPTQDCLSSPEFLD--HVTKVMLVIDAAVSHL 81



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>CCNA_CHLVR (P51986) G2/mitotic-specific cyclin-A (Fragment)|
          Length = 420

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
 Frame = +3

Query: 132 NLNVVFLLSMVATNLLSLYHLSIRASPTTPALQSGSDFDQQQVLQQLSAIRATVSHLRSA 311
           +++V +  SM+A + + + +  + + P TP L+  S ++ Q +   L+ I   + HL ++
Sbjct: 333 DISVKYAPSMIAASSICVANHMLNSIPWTPTLEFYSGYNIQDLRSCLNEIH--LLHLAAS 390

Query: 312 TPP--------PPPELVLYSRLAPVASAC 374
           T P          P+    S L P+   C
Sbjct: 391 TNPQQAIQQKYKSPKFGCVSSLVPLEMPC 419



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>E75BB_DROME (P13055) Ecdysone-induced protein 75B isoform B (E75-C)|
          Length = 1412

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
 Frame = +3

Query: 216 TPALQSGSDFD---QQQVLQQLSAIRATVSHLRSATPPPPPEL 335
           TP + S S  +   QQQ  QQ S++  +V  +R   PPPPP++
Sbjct: 374 TPVVSSSSSSNMHHQQQQQQQQSSLGNSV--MRPPPPPPPPKV 414



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>PKAA_STRCO (P54739) Serine/threonine protein kinase pkaA (EC 2.7.11.1)|
          Length = 543

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = -2

Query: 127 PHGQPPPVEAEPTTVFLIAGRSDPLSPVPSLREGQ 23
           PH   P   A+PT V    G  DP + +P +  GQ
Sbjct: 326 PHTSGPAGAADPTAVLPSTGAPDPTAVMPPVPPGQ 360



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>UBE4B_MOUSE (Q9ES00) Ubiquitin conjugation factor E4 B (Ubiquitin-fusion|
           degradation protein 2) (Ufd2a)
          Length = 1173

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -2

Query: 181 ESRLVATMESRNTTLRFRPHGQPPPVEAE-PTTVFLIAGRSDPLSPVPSLR 32
           E+R+ ATME  N  L      QPP  E + PT  F +   +  LS +PS R
Sbjct: 595 ETRINATMEDVNERLTELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCR 645



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>GGPPS_GIBFU (Q92236) Geranylgeranyl pyrophosphate synthetase (GGPP synthetase)|
           (GGPPSase) (Geranylgeranyl diphosphate synthase)
           [Includes: Dimethylallyltranstransferase (EC 2.5.1.1);
           Geranyltranstransferase (EC 2.5.1.10);
           Farnesyltranstransferase (EC 2.5
          Length = 418

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
 Frame = +3

Query: 195 SIRASPTTPALQ---SGSDFDQQQVLQQLSAIRATVSHLRSATPPPPPE 332
           S+ A+PT P L+    G    Q+Q+  +     A    +++  PPP PE
Sbjct: 59  SLNATPTKPVLRPVPEGDWLSQKQLSPRAQMSNAGYGVMQAPNPPPDPE 107


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,478,561
Number of Sequences: 219361
Number of extensions: 561972
Number of successful extensions: 3587
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 3206
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3531
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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