ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast75f01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197902.1| Oryza sativa (japonica cultivar-group) hypothet... 86 1e-13
2gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 gen... 86 1e-13
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
4dbj|AK119822.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
5dbj|AK107128.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
6dbj|AK071802.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 1e-13
7gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 86 1e-13
8dbj|AP004473.1| Lotus japonicus genomic DNA, chromosome 4, clone... 64 4e-07
9ref|XM_559471.1| Anopheles gambiae str. PEST ENSANGP00000027654 ... 44 0.36
10gb|AC116697.7| Mus musculus chromosome 3, clone RP24-444C12, com... 42 1.4
11gb|AC130724.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
12gb|AC005996.2| Homo sapiens PAC clone RP4-555L14 from 7, complet... 42 1.4
13dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
14gb|AY104215.1| Zea mays PCO104710 mRNA sequence 42 1.4
15gb|DQ213225.1| Taeniopygia guttata clone 0061P0004A02 WD repeat ... 40 5.6
16ref|XM_519551.1| PREDICTED: Pan troglodytes polymerase (DNA dire... 40 5.6
17ref|NM_033350.1| Rattus norvegicus phospholipase C, beta 3 (Plcb... 40 5.6
18ref|XM_424040.1| PREDICTED: Gallus gallus similar to hypothetica... 40 5.6
19gb|AY657746.1| Synthetic construct Peudomonas aeruginosa clone F... 40 5.6
20gb|DQ120508.1| Rattus norvegicus strain SHR phospholipase C beta... 40 5.6
21gb|DQ120507.1| Rattus norvegicus strain WKY phospholipase C beta... 40 5.6
22emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete ... 40 5.6
23ref|NM_001024221.1| Danio rerio WD repeat domain 33 (wdr33), mRNA 40 5.6
24gb|AY029221.1| Pseudomonas aeruginosa FlgA gene, partial cds; an... 40 5.6
25gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.6
26gb|BC095316.1| Danio rerio WD repeat domain 33, mRNA (cDNA clone... 40 5.6
27dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
28ref|XM_394613.2| PREDICTED: Apis mellifera similar to MGC83846 p... 40 5.6
29dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
30gb|M99567.1|RATPHOCBE Rattus norvegicus phospholipase C beta-3 m... 40 5.6
31dbj|AB197122.1| Homo sapiens APH-1b mRNA for anterior pharynx de... 40 5.6
32dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.6
33dbj|BA000013.4| Mesorhizobium loti MAFF303099 pMLa DNA, cpmplete... 40 5.6
34gb|AE004826.1| Pseudomonas aeruginosa PAO1, section 387 of 529 o... 40 5.6
35gb|AE004757.1| Pseudomonas aeruginosa PAO1, section 318 of 529 o... 40 5.6
36dbj|AP006460.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
37dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 5.6
38dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 5.6
39emb|AJ581752.1|PHE581752 Pongine herpesvirus 3 (Gorilla herpesvi... 40 5.6
40dbj|AK121657.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
41ref|XM_314539.2| Anopheles gambiae str. PEST ENSANGP00000016244 ... 40 5.6
42dbj|AK067061.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
43gb|AF054584.1|AF054584 Sus scrofa domestica clone PGM-Z13 gastri... 40 5.6
44dbj|AK060607.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
45gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.6
46gb|AC005325.1|AC005325 Homo sapiens chromosome 17, clone hRPK.60... 40 5.6
47emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.6
48gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 5.6 
>ref|NM_197902.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0056G17.17), mRNA
          Length = 1191

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Plus

                                                                      
Query: 147 ttcctgctctccatggtggccaccaacctgctctccctctaccacctctccatccgcgc 205
           ||||| ||||||||||| |||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 79  ttcctactctccatggttgccaccaacctgctgtccctctaccacctctccacccgcgc 137



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 73/84 (86%)
 Strand = Plus / Plus

                                                                       
Query: 330 gagctcgtcctctactcgcgcctcgcccccgtcgcctccgcatgctccgcgcaccccgac 389
           |||||| |||||||||| ||||| || ||| |||||||||| ||||| || ||||| |||
Sbjct: 289 gagctcctcctctactcccgcctggcgcccctcgcctccgcctgctcagcccacccggac 348

                                   
Query: 390 ctcctccaccgcttcatgacctac 413
           ||||||||||| |||||| |||||
Sbjct: 349 ctcctccaccgattcatgtcctac 372



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 253 agcaggtcctccagcagctcagcgccatccgcgccaccgtctccca 298
           ||||| ||||||  ||||| | ||||||||||||||||||||||||
Sbjct: 194 agcagctcctccgccagctgaccgccatccgcgccaccgtctccca 239
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>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence,
            complete sequence
          Length = 139999

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                       
Query: 147  ttcctgctctccatggtggccaccaacctgctctccctctaccacctctccatccgcgc 205
            ||||| ||||||||||| |||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 9457 ttcctactctccatggttgccaccaacctgctgtccctctaccacctctccacccgcgc 9399



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                        
Query: 330  gagctcgtcctctactcgcgcctcgcccccgtcgcctccgcatgctccgcgcaccccgac 389
            |||||| |||||||||| ||||| || ||| |||||||||| ||||| || ||||| |||
Sbjct: 9247 gagctcctcctctactcccgcctggcgcccctcgcctccgcctgctcagcccacccggac 9188

                                    
Query: 390  ctcctccaccgcttcatgacctac 413
            ||||||||||| |||||| |||||
Sbjct: 9187 ctcctccaccgattcatgtcctac 9164



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 253  agcaggtcctccagcagctcagcgccatccgcgccaccgtctccca 298
            ||||| ||||||  ||||| | ||||||||||||||||||||||||
Sbjct: 9342 agcagctcctccgccagctgaccgccatccgcgccaccgtctccca 9297
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                           
Query: 147      ttcctgctctccatggtggccaccaacctgctctccctctaccacctctccatccgcgc 205
                ||||| ||||||||||| |||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 22554788 ttcctactctccatggttgccaccaacctgctgtccctctaccacctctccacccgcgc 22554730



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                            
Query: 330      gagctcgtcctctactcgcgcctcgcccccgtcgcctccgcatgctccgcgcaccccgac 389
                |||||| |||||||||| ||||| || ||| |||||||||| ||||| || ||||| |||
Sbjct: 22554578 gagctcctcctctactcccgcctggcgcccctcgcctccgcctgctcagcccacccggac 22554519

                                        
Query: 390      ctcctccaccgcttcatgacctac 413
                ||||||||||| |||||| |||||
Sbjct: 22554518 ctcctccaccgattcatgtcctac 22554495



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                              
Query: 253      agcaggtcctccagcagctcagcgccatccgcgccaccgtctccca 298
                ||||| ||||||  ||||| | ||||||||||||||||||||||||
Sbjct: 22554673 agcagctcctccgccagctgaccgccatccgcgccaccgtctccca 22554628
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>dbj|AK119822.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-D05, full
           insert sequence
          Length = 2183

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Plus

                                                                      
Query: 147 ttcctgctctccatggtggccaccaacctgctctccctctaccacctctccatccgcgc 205
           ||||| ||||||||||| |||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 79  ttcctactctccatggttgccaccaacctgctgtccctctaccacctctccacccgcgc 137



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 73/84 (86%)
 Strand = Plus / Plus

                                                                       
Query: 330 gagctcgtcctctactcgcgcctcgcccccgtcgcctccgcatgctccgcgcaccccgac 389
           |||||| |||||||||| ||||| || ||| |||||||||| ||||| || ||||| |||
Sbjct: 289 gagctcctcctctactcccgcctggcgcccctcgcctccgcctgctcagcccacccggac 348

                                   
Query: 390 ctcctccaccgcttcatgacctac 413
           ||||||||||| |||||| |||||
Sbjct: 349 ctcctccaccgattcatgtcctac 372



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 253 agcaggtcctccagcagctcagcgccatccgcgccaccgtctccca 298
           ||||| ||||||  ||||| | ||||||||||||||||||||||||
Sbjct: 194 agcagctcctccgtcagctgaccgccatccgcgccaccgtctccca 239
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>dbj|AK107128.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-C02, full
           insert sequence
          Length = 1468

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Plus

                                                                      
Query: 147 ttcctgctctccatggtggccaccaacctgctctccctctaccacctctccatccgcgc 205
           ||||| ||||||||||| |||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 111 ttcctactctccatggttgccaccaacctgctgtccctctaccacctctccacccgcgc 169



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 73/84 (86%)
 Strand = Plus / Plus

                                                                       
Query: 330 gagctcgtcctctactcgcgcctcgcccccgtcgcctccgcatgctccgcgcaccccgac 389
           |||||| |||||||||| ||||| || ||| |||||||||| ||||| || ||||| |||
Sbjct: 321 gagctcctcctctactcccgcctggcgcccctcgcctccgcctgctcagcccacccggac 380

                                   
Query: 390 ctcctccaccgcttcatgacctac 413
           ||||||||||| |||||| |||||
Sbjct: 381 ctcctccaccgattcatgtcctac 404



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 253 agcaggtcctccagcagctcagcgccatccgcgccaccgtctccca 298
           ||||| ||||||  ||||| | ||||||||||||||||||||||||
Sbjct: 226 agcagctcctccgccagctgaccgccatccgcgccaccgtctccca 271
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>dbj|AK071802.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023112H03, full
            insert sequence
          Length = 1613

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                       
Query: 147  ttcctgctctccatggtggccaccaacctgctctccctctaccacctctccatccgcgc 205
            ||||| ||||||||||| |||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 1425 ttcctactctccatggttgccaccaacctgctgtccctctaccacctctccacccgcgc 1367



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                        
Query: 330  gagctcgtcctctactcgcgcctcgcccccgtcgcctccgcatgctccgcgcaccccgac 389
            |||||| |||||||||| ||||| || ||| |||||||||| ||||| || ||||| |||
Sbjct: 1215 gagctcctcctctactcccgcctggcgcccctcgcctccgcctgctcagcccacccggac 1156

                                    
Query: 390  ctcctccaccgcttcatgacctac 413
            ||||||||||| |||||| |||||
Sbjct: 1155 ctcctccaccgattcatgtcctac 1132



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                          
Query: 253  agcaggtcctccagcagctcagcgccatccgcgccaccgtctccca 298
            ||||| ||||||  ||||| | ||||||||||||||||||||||||
Sbjct: 1310 agcagctcctccgccagctgaccgccatccgcgccaccgtctccca 1265
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 55/59 (93%)
 Strand = Plus / Minus

                                                                           
Query: 147      ttcctgctctccatggtggccaccaacctgctctccctctaccacctctccatccgcgc 205
                ||||| ||||||||||| |||||||||||||| ||||||||||||||||||| ||||||
Sbjct: 22567256 ttcctactctccatggttgccaccaacctgctgtccctctaccacctctccacccgcgc 22567198



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 73/84 (86%)
 Strand = Plus / Minus

                                                                            
Query: 330      gagctcgtcctctactcgcgcctcgcccccgtcgcctccgcatgctccgcgcaccccgac 389
                |||||| |||||||||| ||||| || ||| |||||||||| ||||| || ||||| |||
Sbjct: 22567046 gagctcctcctctactcccgcctggcgcccctcgcctccgcctgctcagcccacccggac 22566987

                                        
Query: 390      ctcctccaccgcttcatgacctac 413
                ||||||||||| |||||| |||||
Sbjct: 22566986 ctcctccaccgattcatgtcctac 22566963



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                              
Query: 253      agcaggtcctccagcagctcagcgccatccgcgccaccgtctccca 298
                ||||| ||||||  ||||| | ||||||||||||||||||||||||
Sbjct: 22567141 agcagctcctccgccagctgaccgccatccgcgccaccgtctccca 22567096
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>dbj|AP004473.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT10J15, TM0007,
             complete sequence
          Length = 92741

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                     
Query: 157   ccatggtggccaccaacctgctctccctctaccacctctc 196
             ||||||||||||||||| | ||||||||||||||||||||
Sbjct: 80321 ccatggtggccaccaacatcctctccctctaccacctctc 80282
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>ref|XM_559471.1| Anopheles gambiae str. PEST ENSANGP00000027654
           (ENSANGG00000024201), partial mRNA
          Length = 522

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 251 gcagcaggtcctccagcagctc 272
           ||||||||||||||||||||||
Sbjct: 196 gcagcaggtcctccagcagctc 175
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>gb|AC116697.7| Mus musculus chromosome 3, clone RP24-444C12, complete sequence
          Length = 183146

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 181   ccctctaccacctctccatcc 201
             |||||||||||||||||||||
Sbjct: 55013 ccctctaccacctctccatcc 54993
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>gb|AC130724.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0409G01,
              complete sequence
          Length = 143263

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 376    ccgcgcaccccgacctcctcc 396
              |||||||||||||||||||||
Sbjct: 103414 ccgcgcaccccgacctcctcc 103434
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>gb|AC005996.2| Homo sapiens PAC clone RP4-555L14 from 7, complete sequence
          Length = 122823

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    ggagtgaagggacgggggaaa 54
             |||||||||||||||||||||
Sbjct: 26563 ggagtgaagggacgggggaaa 26543
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 376      ccgcgcaccccgacctcctcc 396
                |||||||||||||||||||||
Sbjct: 13732355 ccgcgcaccccgacctcctcc 13732375
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>gb|AY104215.1| Zea mays PCO104710 mRNA sequence
          Length = 767

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 373 gctccgcgcaccccgacctcctcca 397
           ||||||||||| |||||||||||||
Sbjct: 148 gctccgcgcactccgacctcctcca 172
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>gb|DQ213225.1| Taeniopygia guttata clone 0061P0004A02 WD repeat domain 33
           protein-like mRNA, complete sequence
          Length = 1157

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 238 ccgacttcgaccagcagcaggtcctccagcagctca 273
           ||||||||| ||||||||||| | | ||||||||||
Sbjct: 245 ccgacttcgcccagcagcaggccatgcagcagctca 280
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>ref|XM_519551.1| PREDICTED: Pan troglodytes polymerase (DNA directed), mu
           (LOC463923), mRNA
          Length = 1863

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 261 ctccagcagctcagcgccat 280
           ||||||||||||||||||||
Sbjct: 750 ctccagcagctcagcgccat 731
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>ref|NM_033350.1| Rattus norvegicus phospholipase C, beta 3 (Plcb3), mRNA
          Length = 3726

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 252  cagcaggtcctccagcagct 271
            ||||||||||||||||||||
Sbjct: 3481 cagcaggtcctccagcagct 3500
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>ref|XM_424040.1| PREDICTED: Gallus gallus similar to hypothetical protein
           (LOC426388), partial mRNA
          Length = 1904

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 251 gcagcaggtcctccagcagc 270
           ||||||||||||||||||||
Sbjct: 331 gcagcaggtcctccagcagc 312
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>gb|AY657746.1| Synthetic construct Peudomonas aeruginosa clone FLH033754.01F
           PA3352 gene, partial cds
          Length = 471

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 263 ccagcagctcagcgccatccgcgc 286
           |||||||||| |||||||||||||
Sbjct: 274 ccagcagctcggcgccatccgcgc 251
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>gb|DQ120508.1| Rattus norvegicus strain SHR phospholipase C beta 3 (Plcb3) mRNA,
            complete cds
          Length = 3726

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 252  cagcaggtcctccagcagct 271
            ||||||||||||||||||||
Sbjct: 3481 cagcaggtcctccagcagct 3500
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>gb|DQ120507.1| Rattus norvegicus strain WKY phospholipase C beta 3 (Plcb3) mRNA,
            complete cds
          Length = 3726

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 252  cagcaggtcctccagcagct 271
            ||||||||||||||||||||
Sbjct: 3481 cagcaggtcctccagcagct 3500
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>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29
          Length = 292200

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 249    cagcagcaggtcctccagca 268
              ||||||||||||||||||||
Sbjct: 278987 cagcagcaggtcctccagca 279006
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>ref|NM_001024221.1| Danio rerio WD repeat domain 33 (wdr33), mRNA
          Length = 1451

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 238 ccgacttcgaccagcagcaggtcctccagcagctca 273
           ||||||||| ||||||||||| | | ||||||||||
Sbjct: 581 ccgacttcgcccagcagcaggccatgcagcagctca 616
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>gb|AY029221.1| Pseudomonas aeruginosa FlgA gene, partial cds; and FlgM and FlgN
            genes, complete cds
          Length = 2048

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 263  ccagcagctcagcgccatccgcgc 286
            |||||||||| |||||||||||||
Sbjct: 1365 ccagcagctcggcgccatccgcgc 1342
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 284     cgccaccgtctcccacctccgctccgcc 311
               |||| ||| |||||||||||||||||||
Sbjct: 2064941 cgcccccgcctcccacctccgctccgcc 2064914
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>gb|BC095316.1| Danio rerio WD repeat domain 33, mRNA (cDNA clone MGC:110570
           IMAGE:7159397), complete cds
          Length = 1451

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 238 ccgacttcgaccagcagcaggtcctccagcagctca 273
           ||||||||| ||||||||||| | | ||||||||||
Sbjct: 581 ccgacttcgcccagcagcaggccatgcagcagctca 616
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 381      caccccgacctcctccaccgcttc 404
                |||||||||||||||| |||||||
Sbjct: 17618607 caccccgacctcctccgccgcttc 17618584
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>ref|XM_394613.2| PREDICTED: Apis mellifera similar to MGC83846 protein (LOC411139),
            mRNA
          Length = 5145

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 166  ccaccaacctgctctccctc 185
            ||||||||||||||||||||
Sbjct: 2360 ccaccaacctgctctccctc 2379
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 68       gccggcgatgaggaagacggtggt 91
                ||||| ||||||||||||||||||
Sbjct: 27414582 gccggagatgaggaagacggtggt 27414559
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>gb|M99567.1|RATPHOCBE Rattus norvegicus phospholipase C beta-3 mRNA, partial cds
          Length = 3800

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 252  cagcaggtcctccagcagct 271
            ||||||||||||||||||||
Sbjct: 3415 cagcaggtcctccagcagct 3434
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>dbj|AB197122.1| Homo sapiens APH-1b mRNA for anterior pharynx defective 1b splice
           variant-2, complete cds
          Length = 872

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 65  tcggccggcgatgaggaaga 84
           ||||||||||||||||||||
Sbjct: 131 tcggccggcgatgaggaaga 112
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 338     cctctactcgcgcctcgccc 357
               ||||||||||||||||||||
Sbjct: 8260216 cctctactcgcgcctcgccc 8260235
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>dbj|BA000013.4| Mesorhizobium loti MAFF303099 pMLa DNA, cpmplete genome
          Length = 351911

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 244    tcgaccagcagcaggtcctc 263
              ||||||||||||||||||||
Sbjct: 266215 tcgaccagcagcaggtcctc 266196
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>gb|AE004826.1| Pseudomonas aeruginosa PAO1, section 387 of 529 of the complete
            genome
          Length = 10458

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 272  cagcgccatccgcgccaccg 291
            ||||||||||||||||||||
Sbjct: 9257 cagcgccatccgcgccaccg 9276
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>gb|AE004757.1| Pseudomonas aeruginosa PAO1, section 318 of 529 of the complete
            genome
          Length = 11608

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 263  ccagcagctcagcgccatccgcgc 286
            |||||||||| |||||||||||||
Sbjct: 8509 ccagcagctcggcgccatccgcgc 8486
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>dbj|AP006460.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBb0003M19
          Length = 171790

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 68     gccggcgatgaggaagacggtggt 91
              ||||| ||||||||||||||||||
Sbjct: 120243 gccggagatgaggaagacggtggt 120220
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 378     gcgcaccccgacctcctccaccgc 401
               |||||||||| |||||||||||||
Sbjct: 1002934 gcgcaccccgtcctcctccaccgc 1002911
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 245     cgaccagcagcaggtcctcc 264
               ||||||||||||||||||||
Sbjct: 2739349 cgaccagcagcaggtcctcc 2739330
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>emb|AJ581752.1|PHE581752 Pongine herpesvirus 3 (Gorilla herpesvirus) gB gene for glycoprotein
            B gene
          Length = 2598

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 204  gcctcccccaccacgccggc 223
            ||||||||||||||||||||
Sbjct: 1315 gcctcccccaccacgccggc 1334
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>dbj|AK121657.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033063G18, full
           insert sequence
          Length = 1963

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 106 cggggggaggctggccgtgc 125
           ||||||||||||||||||||
Sbjct: 309 cggggggaggctggccgtgc 328
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>ref|XM_314539.2| Anopheles gambiae str. PEST ENSANGP00000016244 (ENSANGG00000013755),
            partial mRNA
          Length = 2001

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 74   gatgaggaagacggtggtgg 93
            ||||||||||||||||||||
Sbjct: 1303 gatgaggaagacggtggtgg 1322
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>dbj|AK067061.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091D19, full
           insert sequence
          Length = 3265

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 381 caccccgacctcctccaccgcttc 404
           |||||||||||||||| |||||||
Sbjct: 125 caccccgacctcctccgccgcttc 148
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>gb|AF054584.1|AF054584 Sus scrofa domestica clone PGM-Z13 gastric mucin (MUC5AC) mRNA,
            partial cds
          Length = 3336

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 247  accagcagcaggtcctccagcagc 270
            ||||||| ||||||||||||||||
Sbjct: 2606 accagcaccaggtcctccagcagc 2629
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>dbj|AK060607.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-C04, full
            insert sequence
          Length = 3093

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 68   gccggcgatgaggaagacggtggt 91
            ||||| ||||||||||||||||||
Sbjct: 2891 gccggagatgaggaagacggtggt 2914
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 381      caccccgacctcctccaccgcttc 404
                |||||||||||||||| |||||||
Sbjct: 17572978 caccccgacctcctccgccgcttc 17572955
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>gb|AC005325.1|AC005325 Homo sapiens chromosome 17, clone hRPK.60_A_24, complete sequence
          Length = 165228

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 248   ccagcagcaggtcctccagc 267
             ||||||||||||||||||||
Sbjct: 36295 ccagcagcaggtcctccagc 36276
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>emb|AL935066.2|CNS08CCI Oryza sativa chromosome 12, . BAC OSJNBa0005P03 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 162200

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 381    caccccgacctcctccaccgcttc 404
              |||||||||||||||| |||||||
Sbjct: 110943 caccccgacctcctccgccgcttc 110920
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 378    gcgcaccccgacctcctccaccgc 401
              |||||||||| |||||||||||||
Sbjct: 675926 gcgcaccccgtcctcctccaccgc 675903


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,964,769
Number of Sequences: 3902068
Number of extensions: 2964769
Number of successful extensions: 68458
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67754
Number of HSP's gapped (non-prelim): 704
length of query: 419
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 397
effective length of database: 17,147,199,772
effective search space: 6807438309484
effective search space used: 6807438309484
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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