ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast75e12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H 488 e-135
2ref|XM_467191.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.055
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.055
4dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.055
5gb|BC038042.1| Mus musculus syntaxin binding protein 5 (tomosyn)... 42 0.85
6ref|XM_987258.1| PREDICTED: Mus musculus syntaxin binding protei... 42 0.85
7ref|XM_987291.1| PREDICTED: Mus musculus syntaxin binding protei... 42 0.85
8ref|XM_987316.1| PREDICTED: Mus musculus syntaxin binding protei... 42 0.85
9ref|XM_987354.1| PREDICTED: Mus musculus syntaxin binding protei... 42 0.85
10ref|XM_987426.1| PREDICTED: Mus musculus syntaxin binding protei... 42 0.85
11ref|XM_987392.1| PREDICTED: Mus musculus syntaxin binding protei... 42 0.85
12ref|XM_896376.2| PREDICTED: Mus musculus syntaxin binding protei... 42 0.85
13ref|XM_896398.2| PREDICTED: Mus musculus syntaxin binding protei... 42 0.85
14ref|XM_896361.2| PREDICTED: Mus musculus syntaxin binding protei... 42 0.85
15ref|XM_896388.2| PREDICTED: Mus musculus syntaxin binding protei... 42 0.85
16ref|XM_896347.2| PREDICTED: Mus musculus syntaxin binding protei... 42 0.85
17ref|XM_125517.7| PREDICTED: Mus musculus syntaxin binding protei... 42 0.85
18ref|XM_919925.2| PREDICTED: Mus musculus syntaxin binding protei... 42 0.85
19ref|XM_919937.2| PREDICTED: Mus musculus syntaxin binding protei... 42 0.85
20ref|XM_919918.2| PREDICTED: Mus musculus syntaxin binding protei... 42 0.85
21ref|XM_976390.1| PREDICTED: Mus musculus syntaxin binding protei... 42 0.85
22ref|XM_976354.1| PREDICTED: Mus musculus syntaxin binding protei... 42 0.85
23gb|AC122390.4| Mus musculus BAC clone RP24-80O9 from chromosome ... 42 0.85
24emb|AL359554.7| Human DNA sequence from clone RP4-639P13 on chro... 42 0.85
25gb|AC098696.3| Oryza sativa (japonica cultivar-group) chromosome... 42 0.85
26gb|AC008975.3| Homo sapiens chromosome 19 clone LLNL-F_138H2, co... 42 0.85
27gb|DQ374017.1| Beta vulgaris chromosome 9 clone BAC62 genomic se... 42 0.85
28gb|AC093429.2| Homo sapiens chromosome 1 clone RP11-465K1, compl... 42 0.85
29gb|CP000249.1| Frankia sp. CcI3, complete genome 42 0.85
30dbj|AK122417.1| Mus musculus mRNA for mKIAA4253 protein 42 0.85
31dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.85
32dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.85
33gb|AC010150.3| Homo sapiens BAC clone RP11-404P12 from 2, comple... 42 0.85
34gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 0.85
35gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 0.85
36emb|AL954826.3|CNS08CD2 Oryza sativa chromosome 12, . BAC OSJNBb... 42 0.85
37ref|XM_470982.1| Oryza sativa (japonica cultivar-group), predic... 40 3.4
38gb|AC011250.6| Drosophila melanogaster clone BACR21B19, complete... 40 3.4
39gb|AC010839.7| Drosophila melanogaster clone BACN19N21, complete... 40 3.4
40gb|BC016958.1| Homo sapiens hypothetical protein DKFZp761H1710, ... 40 3.4
41gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 3.4
42gb|AC116473.13| Mus musculus chromosome 8, clone RP23-385E22, co... 40 3.4
43emb|AM072757.1| Methylocella silvestris soluble methane monooxyg... 40 3.4
44emb|BX255925.17| Human DNA sequence from clone RP13-122B23 on ch... 40 3.4
45gb|AC123514.2| Oryza sativa (japonica cultivar-group) chromosome... 40 3.4
46gb|CP000088.1| Thermobifida fusca YX, complete genome 40 3.4
47emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete ... 40 3.4
48emb|AL136540.1|HSM801514 Homo sapiens mRNA; cDNA DKFZp761H1710 (... 40 3.4
49emb|AJ719457.1| Gallus gallus mRNA for hypothetical protein, clo... 40 3.4
50gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 3.4
51gb|AC010325.7| Homo sapiens chromosome 19 clone CTD-2568A17, com... 40 3.4
52tpg|BK002945.1| TPA: TPA_inf: Drosophila melanogaster HDC16673 (... 40 3.4
53ref|NM_001038712.1| Drosophila melanogaster CG33978-RA (CG33978)... 40 3.4
54ref|XM_926884.1| PREDICTED: Homo sapiens similar to tripartite m... 40 3.4
55gb|AF416715.1|AF416715 Homo sapiens clone 4 unknown mRNA 40 3.4
56dbj|AB168562.1| Macaca fascicularis testis cDNA clone: QtsA-13048 40 3.4
57gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 3.4
58gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 3.4
59gb|AC011613.4|AC011613 Drosophila melanogaster, chromosome 4, re... 40 3.4
60dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.4
61dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.4
62ref|NM_031297.2| Homo sapiens hypothetical protein DKFZp761H1710... 40 3.4
63gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 3.4
64dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 3.4
65dbj|AK105953.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.4
66dbj|AK072049.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.4
67dbj|AK068763.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.4
68dbj|AK060108.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.4
69gb|BC090061.1| Homo sapiens hypothetical protein DKFZp761H1710, ... 40 3.4
70gb|AE003844.5| Drosophila melanogaster chromosome 4, section 2 o... 40 3.4
71gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 3.4
72emb|AL662992.3|OSJN00193 Oryza sativa genomic DNA, chromosome 4,... 40 3.4
73emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4,... 40 3.4
74emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa... 40 3.4 
>emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H
          Length = 59748

 Score =  488 bits (246), Expect = e-135
 Identities = 256/260 (98%)
 Strand = Plus / Plus

                                                                         
Query: 1     actgccgcccgcgccgaaaccccccttcccttcccggcttcccctgcctgcccgccactg 60
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33266 actgccgcccgcgccgaaaccccccttcccttcccggcttcccctgcctgcccgccactg 33325

                                                                         
Query: 61    ccattcttgattccttcttccaccccacctcgccctgatccagtggtacggccaagaacc 120
             ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 33326 ccattcttgattccttcttccaccccacctcgccctgatccagtggtccggccaagaacc 33385

                                                                         
Query: 121   aaccaaatggcgtcggcgcgccgcctgctgcagacctaccccggccagttccaggccgcc 180
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33386 aaccaaatggcgtcggcgcgccgcctgctgcagacctaccccggccagttccaggccgcc 33445

                                                                         
Query: 181   gagccgcccgacgccctcggcgccgactccgacgtcgtggncatnctcgccgcgctgctc 240
             |||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 33446 gagccgcccgacgccctcggcgccgactccgacgtcgtggtcatcctcgccgcgctgctc 33505

                                 
Query: 241   tgcgcgctcctctgagtcgt 260
             |||||||||||||| |||||
Sbjct: 33506 tgcgcgctcctctgcgtcgt 33525
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>ref|XM_467191.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 570

 Score = 46.1 bits (23), Expect = 0.055
 Identities = 42/49 (85%)
 Strand = Plus / Plus

                                                            
Query: 206 actccgacgtcgtggncatnctcgccgcgctgctctgcgcgctcctctg 254
           |||| ||| |||| | ||| ||||||| |||||||||||||||| ||||
Sbjct: 56  actcggacctcgtcgtcatcctcgccgggctgctctgcgcgctcatctg 104
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.055
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                                 
Query: 206      actccgacgtcgtggncatnctcgccgcgctgctctgcgcgctcctctg 254
                |||| ||| |||| | ||| ||||||| |||||||||||||||| ||||
Sbjct: 28116349 actcggacctcgtcgtcatcctcgccgggctgctctgcgcgctcatctg 28116301
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>dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1717_A09
          Length = 203132

 Score = 46.1 bits (23), Expect = 0.055
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                               
Query: 206    actccgacgtcgtggncatnctcgccgcgctgctctgcgcgctcctctg 254
              |||| ||| |||| | ||| ||||||| |||||||||||||||| ||||
Sbjct: 105996 actcggacctcgtcgtcatcctcgccgggctgctctgcgcgctcatctg 105948
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>gb|BC038042.1| Mus musculus syntaxin binding protein 5 (tomosyn), mRNA (cDNA clone
            IMAGE:4194407)
          Length = 4247

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 22   ccccttcccttcccggcttcc 42
            |||||||||||||||||||||
Sbjct: 2462 ccccttcccttcccggcttcc 2442
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>ref|XM_987258.1| PREDICTED: Mus musculus syntaxin binding protein 5 (tomosyn),
            transcript variant 1 (Stxbp5), mRNA
          Length = 4219

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 22   ccccttcccttcccggcttcc 42
            |||||||||||||||||||||
Sbjct: 2441 ccccttcccttcccggcttcc 2421
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>ref|XM_987291.1| PREDICTED: Mus musculus syntaxin binding protein 5 (tomosyn),
            transcript variant 2 (Stxbp5), mRNA
          Length = 6813

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 22   ccccttcccttcccggcttcc 42
            |||||||||||||||||||||
Sbjct: 2833 ccccttcccttcccggcttcc 2813
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>ref|XM_987316.1| PREDICTED: Mus musculus syntaxin binding protein 5 (tomosyn),
            transcript variant 3 (Stxbp5), mRNA
          Length = 8825

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 22   ccccttcccttcccggcttcc 42
            |||||||||||||||||||||
Sbjct: 4845 ccccttcccttcccggcttcc 4825
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>ref|XM_987354.1| PREDICTED: Mus musculus syntaxin binding protein 5 (tomosyn),
            transcript variant 4 (Stxbp5), mRNA
          Length = 8834

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 22   ccccttcccttcccggcttcc 42
            |||||||||||||||||||||
Sbjct: 4854 ccccttcccttcccggcttcc 4834
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>ref|XM_987426.1| PREDICTED: Mus musculus syntaxin binding protein 5 (tomosyn),
            transcript variant 6 (Stxbp5), mRNA
          Length = 8717

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 22   ccccttcccttcccggcttcc 42
            |||||||||||||||||||||
Sbjct: 4737 ccccttcccttcccggcttcc 4717
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>ref|XM_987392.1| PREDICTED: Mus musculus syntaxin binding protein 5 (tomosyn),
            transcript variant 5 (Stxbp5), mRNA
          Length = 8825

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 22   ccccttcccttcccggcttcc 42
            |||||||||||||||||||||
Sbjct: 4845 ccccttcccttcccggcttcc 4825
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>ref|XM_896376.2| PREDICTED: Mus musculus syntaxin binding protein 5 (tomosyn),
            transcript variant 4 (Stxbp5), mRNA
          Length = 4219

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 22   ccccttcccttcccggcttcc 42
            |||||||||||||||||||||
Sbjct: 2441 ccccttcccttcccggcttcc 2421
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>ref|XM_896398.2| PREDICTED: Mus musculus syntaxin binding protein 5 (tomosyn),
            transcript variant 6 (Stxbp5), mRNA
          Length = 6813

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 22   ccccttcccttcccggcttcc 42
            |||||||||||||||||||||
Sbjct: 2833 ccccttcccttcccggcttcc 2813
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>ref|XM_896361.2| PREDICTED: Mus musculus syntaxin binding protein 5 (tomosyn),
            transcript variant 3 (Stxbp5), mRNA
          Length = 8825

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 22   ccccttcccttcccggcttcc 42
            |||||||||||||||||||||
Sbjct: 4845 ccccttcccttcccggcttcc 4825
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>ref|XM_896388.2| PREDICTED: Mus musculus syntaxin binding protein 5 (tomosyn),
            transcript variant 5 (Stxbp5), mRNA
          Length = 8834

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 22   ccccttcccttcccggcttcc 42
            |||||||||||||||||||||
Sbjct: 4854 ccccttcccttcccggcttcc 4834
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>ref|XM_896347.2| PREDICTED: Mus musculus syntaxin binding protein 5 (tomosyn),
            transcript variant 2 (Stxbp5), mRNA
          Length = 8717

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 22   ccccttcccttcccggcttcc 42
            |||||||||||||||||||||
Sbjct: 4737 ccccttcccttcccggcttcc 4717
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>ref|XM_125517.7| PREDICTED: Mus musculus syntaxin binding protein 5 (tomosyn),
            transcript variant 1 (Stxbp5), mRNA
          Length = 8825

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 22   ccccttcccttcccggcttcc 42
            |||||||||||||||||||||
Sbjct: 4845 ccccttcccttcccggcttcc 4825
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>ref|XM_919925.2| PREDICTED: Mus musculus syntaxin binding protein 5 (tomosyn),
            transcript variant 9 (Stxbp5), mRNA
          Length = 4213

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 22   ccccttcccttcccggcttcc 42
            |||||||||||||||||||||
Sbjct: 2441 ccccttcccttcccggcttcc 2421
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>ref|XM_919937.2| PREDICTED: Mus musculus syntaxin binding protein 5 (tomosyn),
            transcript variant 10 (Stxbp5), mRNA
          Length = 6806

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 22   ccccttcccttcccggcttcc 42
            |||||||||||||||||||||
Sbjct: 2833 ccccttcccttcccggcttcc 2813
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>ref|XM_919918.2| PREDICTED: Mus musculus syntaxin binding protein 5 (tomosyn),
            transcript variant 8 (Stxbp5), mRNA
          Length = 8824

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 22   ccccttcccttcccggcttcc 42
            |||||||||||||||||||||
Sbjct: 4851 ccccttcccttcccggcttcc 4831
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>ref|XM_976390.1| PREDICTED: Mus musculus syntaxin binding protein 5 (tomosyn),
            transcript variant 12 (Stxbp5), mRNA
          Length = 8710

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 22   ccccttcccttcccggcttcc 42
            |||||||||||||||||||||
Sbjct: 4737 ccccttcccttcccggcttcc 4717
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>ref|XM_976354.1| PREDICTED: Mus musculus syntaxin binding protein 5 (tomosyn),
            transcript variant 11 (Stxbp5), mRNA
          Length = 8818

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 22   ccccttcccttcccggcttcc 42
            |||||||||||||||||||||
Sbjct: 4845 ccccttcccttcccggcttcc 4825
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>gb|AC122390.4| Mus musculus BAC clone RP24-80O9 from chromosome 10, complete
            sequence
          Length = 218880

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 22   ccccttcccttcccggcttcc 42
            |||||||||||||||||||||
Sbjct: 7304 ccccttcccttcccggcttcc 7324
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>emb|AL359554.7| Human DNA sequence from clone RP4-639P13 on chromosome 1p21.3-22.3
             Contains ESTs, STSs, GSSs and a CpG island. Contains part
             of a novel gene for a protein similar to rat
             transporter-like protein (CTL1) and the CNN3 gene for two
             isoforms of acidic calponin 3, complete sequence
          Length = 106277

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 71    ttccttcttccaccccacctc 91
             |||||||||||||||||||||
Sbjct: 44544 ttccttcttccaccccacctc 44564
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>gb|AC098696.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0050E08,
              complete sequence
          Length = 180499

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 175    gccgccgagccgcccgacgcc 195
              |||||||||||||||||||||
Sbjct: 152790 gccgccgagccgcccgacgcc 152810
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>gb|AC008975.3| Homo sapiens chromosome 19 clone LLNL-F_138H2, complete sequence
          Length = 39577

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 23    cccttcccttcccggcttccc 43
             |||||||||||||||||||||
Sbjct: 18887 cccttcccttcccggcttccc 18907
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>gb|DQ374017.1| Beta vulgaris chromosome 9 clone BAC62 genomic sequence
          Length = 30482

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 28    cccttcccggcttcccctgcc 48
             |||||||||||||||||||||
Sbjct: 26447 cccttcccggcttcccctgcc 26427
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>gb|AC093429.2| Homo sapiens chromosome 1 clone RP11-465K1, complete sequence
          Length = 182165

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 71    ttccttcttccaccccacctc 91
             |||||||||||||||||||||
Sbjct: 39334 ttccttcttccaccccacctc 39314
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 196     ctcggcgccgactccgacgtc 216
               |||||||||||||||||||||
Sbjct: 4070986 ctcggcgccgactccgacgtc 4071006
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>dbj|AK122417.1| Mus musculus mRNA for mKIAA4253 protein
          Length = 6145

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 22   ccccttcccttcccggcttcc 42
            |||||||||||||||||||||
Sbjct: 2173 ccccttcccttcccggcttcc 2153
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 175      gccgccgagccgcccgacgcc 195
                |||||||||||||||||||||
Sbjct: 12470624 gccgccgagccgcccgacgcc 12470604
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 175     gccgccgagccgcccgacgcc 195
               |||||||||||||||||||||
Sbjct: 3870994 gccgccgagccgcccgacgcc 3871014
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>gb|AC010150.3| Homo sapiens BAC clone RP11-404P12 from 2, complete sequence
          Length = 173893

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 60     gccattcttgattccttcttc 80
              |||||||||||||||||||||
Sbjct: 118338 gccattcttgattccttcttc 118318
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 175     gccgccgagccgcccgacgcc 195
               |||||||||||||||||||||
Sbjct: 3870915 gccgccgagccgcccgacgcc 3870935
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 175      gccgccgagccgcccgacgcc 195
                |||||||||||||||||||||
Sbjct: 12424994 gccgccgagccgcccgacgcc 12424974
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>emb|AL954826.3|CNS08CD2 Oryza sativa chromosome 12, . BAC OSJNBb0080P14 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 132241

 Score = 42.1 bits (21), Expect = 0.85
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 175   gccgccgagccgcccgacgcc 195
             |||||||||||||||||||||
Sbjct: 72102 gccgccgagccgcccgacgcc 72082
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>ref|XM_470982.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 990

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 192 cgccctcggcgccgactccgacgt 215
           |||||||| |||||||||||||||
Sbjct: 612 cgccctcgccgccgactccgacgt 635
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>gb|AC011250.6| Drosophila melanogaster clone BACR21B19, complete sequence
          Length = 161692

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 64     ttcttgattccttcttccac 83
              ||||||||||||||||||||
Sbjct: 124116 ttcttgattccttcttccac 124135
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>gb|AC010839.7| Drosophila melanogaster clone BACN19N21, complete sequence
          Length = 92302

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    ttcttgattccttcttccac 83
             ||||||||||||||||||||
Sbjct: 24867 ttcttgattccttcttccac 24886
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>gb|BC016958.1| Homo sapiens hypothetical protein DKFZp761H1710, mRNA (cDNA clone
           MGC:21544 IMAGE:4151712), complete cds
          Length = 804

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 43  cctgcctgcccgccactgcc 62
           ||||||||||||||||||||
Sbjct: 592 cctgcctgcccgccactgcc 611
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 158     accccggccagttccaggcc 177
               ||||||||||||||||||||
Sbjct: 6050073 accccggccagttccaggcc 6050054
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>gb|AC116473.13| Mus musculus chromosome 8, clone RP23-385E22, complete sequence
          Length = 186155

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 72     tccttcttccaccccacctc 91
              ||||||||||||||||||||
Sbjct: 150710 tccttcttccaccccacctc 150729
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>emb|AM072757.1| Methylocella silvestris soluble methane monooxygenase operon (smmo
             genes)
          Length = 19227

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   ccgcgctgctctgcgcgctc 249
             ||||||||||||||||||||
Sbjct: 12407 ccgcgctgctctgcgcgctc 12426
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>emb|BX255925.17| Human DNA sequence from clone RP13-122B23 on chromosome 9, complete
             sequence
          Length = 100719

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    cctgcctgcccgccactgcc 62
             ||||||||||||||||||||
Sbjct: 15801 cctgcctgcccgccactgcc 15782
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>gb|AC123514.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBb0004B05, complete sequence
          Length = 121223

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 222  catnctcgccgcgctgctctgcg 244
            ||| |||||||||||||||||||
Sbjct: 3616 catcctcgccgcgctgctctgcg 3638
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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 229     gccgcgctgctctgcgcgctcctc 252
               |||||||||||| |||||||||||
Sbjct: 1319278 gccgcgctgctcggcgcgctcctc 1319255
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>emb|AL939104.1|SCO939104 Streptomyces coelicolor A3(2) complete genome; segment 1/29
          Length = 299050

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    cggccagttccaggccgccg 181
              ||||||||||||||||||||
Sbjct: 250849 cggccagttccaggccgccg 250868
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>emb|AL136540.1|HSM801514 Homo sapiens mRNA; cDNA DKFZp761H1710 (from clone DKFZp761H1710)
          Length = 835

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 43  cctgcctgcccgccactgcc 62
           ||||||||||||||||||||
Sbjct: 586 cctgcctgcccgccactgcc 605
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>emb|AJ719457.1| Gallus gallus mRNA for hypothetical protein, clone 2i14
          Length = 835

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 231 cgcgctgctctgcgcgctcctctg 254
           |||||||||||||||||| |||||
Sbjct: 62  cgcgctgctctgcgcgctgctctg 85
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 227     tcgccgcgctgctctgcgcg 246
               ||||||||||||||||||||
Sbjct: 2816591 tcgccgcgctgctctgcgcg 2816610
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>gb|AC010325.7| Homo sapiens chromosome 19 clone CTD-2568A17, complete sequence
          Length = 166439

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    cccttcccggcttcccctgc 47
             ||||||||||||||||||||
Sbjct: 58432 cccttcccggcttcccctgc 58413
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>tpg|BK002945.1| TPA: TPA_inf: Drosophila melanogaster HDC16673 (HDC16673) gene,
            complete cds
          Length = 8161

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 64   ttcttgattccttcttccac 83
            ||||||||||||||||||||
Sbjct: 2786 ttcttgattccttcttccac 2805
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>ref|NM_001038712.1| Drosophila melanogaster CG33978-RA (CG33978), mRNA
          Length = 12171

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 64   ttcttgattccttcttccac 83
            ||||||||||||||||||||
Sbjct: 4622 ttcttgattccttcttccac 4603
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>ref|XM_926884.1| PREDICTED: Homo sapiens similar to tripartite motif protein 32
            (predicted) (LOC653323), mRNA
          Length = 1161

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 43   cctgcctgcccgccactgcc 62
            ||||||||||||||||||||
Sbjct: 993  cctgcctgcccgccactgcc 1012
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>gb|AF416715.1|AF416715 Homo sapiens clone 4 unknown mRNA
          Length = 629

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 43  cctgcctgcccgccactgcc 62
           ||||||||||||||||||||
Sbjct: 584 cctgcctgcccgccactgcc 603
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>dbj|AB168562.1| Macaca fascicularis testis cDNA clone: QtsA-13048
          Length = 2170

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 32   tcccggcttcccctgcctgcccgc 55
            ||||||||||||| ||||||||||
Sbjct: 1781 tcccggcttccccagcctgcccgc 1804
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 163     ggccagttccaggccgccga 182
               ||||||||||||||||||||
Sbjct: 1270175 ggccagttccaggccgccga 1270156
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   gccgccgagccgcccgacgc 194
             ||||||||||||||||||||
Sbjct: 91833 gccgccgagccgcccgacgc 91852
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>gb|AC011613.4|AC011613 Drosophila melanogaster, chromosome 4, region 101F-102F, BAC clone
             BACN04K08, complete sequence
          Length = 67359

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    ttcttgattccttcttccac 83
             ||||||||||||||||||||
Sbjct: 13117 ttcttgattccttcttccac 13136
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 192    cgccctcggcgccgactccgacgt 215
              |||||||| |||||||||||||||
Sbjct: 395105 cgccctcgccgccgactccgacgt 395128
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11,
              complete sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 222    catnctcgccgcgctgctctgcg 244
              ||| |||||||||||||||||||
Sbjct: 725325 catcctcgccgcgctgctctgcg 725347
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>ref|NM_031297.2| Homo sapiens hypothetical protein DKFZp761H1710 (DKFZP761H1710),
           mRNA
          Length = 770

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 43  cctgcctgcccgccactgcc 62
           ||||||||||||||||||||
Sbjct: 586 cctgcctgcccgccactgcc 605
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 184     ccgcccgacgccctcggcgccgac 207
               ||||||||||||| ||||||||||
Sbjct: 1701730 ccgcccgacgcccgcggcgccgac 1701753
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 199     ggcgccgactccgacgtcgt 218
               ||||||||||||||||||||
Sbjct: 1242468 ggcgccgactccgacgtcgt 1242449
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>dbj|AK105953.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-D04, full
           insert sequence
          Length = 1249

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 192 cgccctcggcgccgactccgacgt 215
           |||||||| |||||||||||||||
Sbjct: 679 cgccctcgccgccgactccgacgt 702
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>dbj|AK072049.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110E20, full
           insert sequence
          Length = 1239

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 192 cgccctcggcgccgactccgacgt 215
           |||||||| |||||||||||||||
Sbjct: 681 cgccctcgccgccgactccgacgt 704
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>dbj|AK068763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013164G01, full
           insert sequence
          Length = 1240

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 192 cgccctcggcgccgactccgacgt 215
           |||||||| |||||||||||||||
Sbjct: 681 cgccctcgccgccgactccgacgt 704
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>dbj|AK060108.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C09, full
           insert sequence
          Length = 1196

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                  
Query: 222 catnctcgccgcgctgctctgcg 244
           ||| |||||||||||||||||||
Sbjct: 549 catcctcgccgcgctgctctgcg 571
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>gb|BC090061.1| Homo sapiens hypothetical protein DKFZp761H1710, mRNA (cDNA clone
           MGC:88636 IMAGE:6480507), complete cds
          Length = 1848

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 43  cctgcctgcccgccactgcc 62
           ||||||||||||||||||||
Sbjct: 833 cctgcctgcccgccactgcc 852
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>gb|AE003844.5| Drosophila melanogaster chromosome 4, section 2 of 5 of the complete
             sequence
          Length = 315846

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 64    ttcttgattccttcttccac 83
             ||||||||||||||||||||
Sbjct: 15876 ttcttgattccttcttccac 15895
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 222    catnctcgccgcgctgctctgcg 244
              ||| |||||||||||||||||||
Sbjct: 725325 catcctcgccgcgctgctctgcg 725347
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>emb|AL662992.3|OSJN00193 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004G23,
             complete sequence
          Length = 115972

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 192   cgccctcggcgccgactccgacgt 215
             |||||||| |||||||||||||||
Sbjct: 79764 cgccctcgccgccgactccgacgt 79787
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>emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085F13,
             complete sequence
          Length = 130249

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 192   cgccctcggcgccgactccgacgt 215
             |||||||| |||||||||||||||
Sbjct: 33857 cgccctcgccgccgactccgacgt 33880
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>emb|BX000512.1|CNS08CE2 Oryza sativa chromosome 11, . BAC OSJNBa0025K19 of library OSJNBa from
             chromosome 11 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 181322

 Score = 40.1 bits (20), Expect = 3.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 222   catnctcgccgcgctgctctgcg 244
             ||| |||||||||||||||||||
Sbjct: 17647 catcctcgccgcgctgctctgcg 17625


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,166,975
Number of Sequences: 3902068
Number of extensions: 2166975
Number of successful extensions: 52964
Number of sequences better than 10.0: 74
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 51480
Number of HSP's gapped (non-prelim): 1484
length of query: 260
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 238
effective length of database: 17,147,199,772
effective search space: 4081033545736
effective search space used: 4081033545736
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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