ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast75e11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MEGL_PSEPU (P13254) Methionine gamma-lyase (EC 4.4.1.11) (L-meth... 49 9e-06
2METZ_PSEAE (P55218) O-succinylhomoserine sulfhydrylase (EC 2.5.1... 48 2e-05
3MET17_KLULA (Q92441) Protein MET17 [Includes: O-acetylhomoserine... 40 0.003
4METB_HELPJ (Q9ZMW7) Cystathionine gamma-synthase (EC 2.5.1.48) (... 39 0.009
5METC_ARATH (P53780) Cystathionine beta-lyase, chloroplast precur... 38 0.012
6CYSD_SCHPO (O13326) O-acetylhomoserine (thiol)-lyase (EC 2.5.1.4... 38 0.016
7METB_HELPY (P56069) Cystathionine gamma-synthase (EC 2.5.1.48) (... 37 0.036
8MET17_YEAST (P06106) Protein MET17 [Includes: O-acetylhomoserine... 36 0.047
9METB_ARATH (P55217) Cystathionine gamma-synthase, chloroplast pr... 36 0.047
10METB_ECOLI (P00935) Cystathionine gamma-synthase (EC 2.5.1.48) (... 35 0.080
11CYSD_EMENI (P50125) O-acetylhomoserine (thiol)-lyase (EC 2.5.1.4... 35 0.10
12METC_LACLC (P0A4K3) Cystathionine beta-lyase (EC 4.4.1.8) (CBL) ... 33 0.40
13METC_LACLA (P0A4K2) Cystathionine beta-lyase (EC 4.4.1.8) (CBL) ... 33 0.40
14METB_HERAU (P24601) Probable cystathionine gamma-synthase (EC 2.... 32 0.67
15CYS3_YEAST (P31373) Cystathionine gamma-lyase (EC 4.4.1.1) (Gamm... 32 0.88
16METB_MYCTU (P66875) Cystathionine gamma-synthase (EC 2.5.1.48) (... 32 0.88
17METB_MYCBO (P66876) Cystathionine gamma-synthase (EC 2.5.1.48) (... 32 0.88
18CGL_RAT (P18757) Cystathionine gamma-lyase (EC 4.4.1.1) (Gamma-c... 32 0.88
19CGL_MOUSE (Q8VCN5) Cystathionine gamma-lyase (EC 4.4.1.1) (Gamma... 31 1.5
20CGL_MACFA (Q60HG7) Cystathionine gamma-lyase (EC 4.4.1.1) (Gamma... 30 2.6
21CGL_CAEEL (P55216) Putative cystathionine gamma-lyase (EC 4.4.1.... 30 3.3
22UL56_HHV11 (P10240) Protein UL56 30 3.3
23CGL_HUMAN (P32929) Cystathionine gamma-lyase (EC 4.4.1.1) (Gamma... 30 3.3
24ATR_KLULA (Q6CT34) Serine/threonine-protein kinase MEC1 (EC 2.7.... 30 3.3
25FTHS_STAAW (Q8NW37) Formate--tetrahydrofolate ligase (EC 6.3.4.3... 30 4.4
26FTHS_STAAS (Q6G8J5) Formate--tetrahydrofolate ligase (EC 6.3.4.3... 30 4.4
27FTHS_STAAR (Q6GFX6) Formate--tetrahydrofolate ligase (EC 6.3.4.3... 30 4.4
28SEMG1_HUMAN (P04279) Semenogelin-1 precursor (Semenogelin I) (SG... 29 5.7
29LEU3_SYMTH (Q67JY2) 3-isopropylmalate dehydrogenase (EC 1.1.1.85... 29 5.7
30METB_HAEIN (P44502) Cystathionine gamma-synthase (EC 2.5.1.48) (... 29 7.5
31RS16_RHILO (Q98E70) 30S ribosomal protein S16 29 7.5
32ACON_MYCAV (O08451) Aconitate hydratase (EC 4.2.1.3) (Citrate hy... 29 7.5
33RS16_RHIME (Q92L43) 30S ribosomal protein S16 28 9.7
34CYSA_STRCO (Q59829) Putative cystathionine gamma-lyase (EC 4.4.1... 28 9.7
35FTHS_STAES (Q8CNV9) Formate--tetrahydrofolate ligase (EC 6.3.4.3... 28 9.7
36FTHS_STAEQ (Q5HNH4) Formate--tetrahydrofolate ligase (EC 6.3.4.3... 28 9.7

>MEGL_PSEPU (P13254) Methionine gamma-lyase (EC 4.4.1.11) (L-methioninase)|
          Length = 398

 Score = 48.5 bits (114), Expect = 9e-06
 Identities = 36/95 (37%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
 Frame = +2

Query: 203 PAAALAAARHEFG--EHGGVNMS-IEASATFTVMEPDTMRRLFTGELGPERGDLYIYSRH 373
           P  A  A  H +   +HGG  +  +  +ATFT    +     F GE        + YSR 
Sbjct: 8   PGFATRAIHHGYDPQDHGGALVPPVYQTATFTFPTVEYGAACFAGEQAG-----HFYSRI 62

Query: 374 FNPTVLALGRQMAALEGTEAAYCTASGMSAISSVL 478
            NPT+  L  +MA+LEG EA    ASGM AI+S L
Sbjct: 63  SNPTLNLLEARMASLEGGEAGLALASGMGAITSTL 97



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>METZ_PSEAE (P55218) O-succinylhomoserine sulfhydrylase (EC 2.5.1.-) (OSH|
           sulfhydrylase)
          Length = 403

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 33/81 (40%), Positives = 43/81 (53%)
 Frame = +2

Query: 239 GEHGGVNMSIEASATFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAAL 418
           GEHG   +   +S  F        R  F GE+        +YSR+ NPTV     ++AAL
Sbjct: 34  GEHGEA-LFTTSSYVFRTAADAAAR--FAGEVPGN-----VYSRYTNPTVRTFEERIAAL 85

Query: 419 EGTEAAYCTASGMSAISSVLM 481
           EG E A  TASGMSAI +++M
Sbjct: 86  EGAEQAVATASGMSAILALVM 106



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>MET17_KLULA (Q92441) Protein MET17 [Includes: O-acetylhomoserine sulfhydrylase|
           (EC 2.5.1.49) (OAH sulfhydrylase) (Homocysteine
           synthase); O-acetylserine sulfhydrylase (EC 2.5.1.47)
           (OAS sulfhydrylase)]
          Length = 443

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 20/36 (55%), Positives = 26/36 (72%)
 Frame = +2

Query: 356 YIYSRHFNPTVLALGRQMAALEGTEAAYCTASGMSA 463
           YIYSR  NPT+  L +++AALEG  AA  T+SG +A
Sbjct: 52  YIYSRIMNPTLDVLEKRLAALEGGIAALATSSGQAA 87



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>METB_HELPJ (Q9ZMW7) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)|
           (O-succinylhomoserine (thiol)-lyase)
          Length = 380

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
 Frame = +2

Query: 245 HGGVNMSIEASA-TFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAALE 421
           HGG+N      A +  + +  T R+     +G  +G  Y YSR  NPT  AL   +A LE
Sbjct: 9   HGGINEDATTGAVSVPIYQTSTYRQ---DAIGRHKG--YEYSRSGNPTRFALEELIADLE 63

Query: 422 GTEAAYCTASGMSAISSV 475
           G    +  ASG++ I +V
Sbjct: 64  GGVKGFAFASGLAGIHAV 81



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>METC_ARATH (P53780) Cystathionine beta-lyase, chloroplast precursor (EC|
           4.4.1.8) (CBL) (Beta-cystathionase) (Cysteine lyase)
          Length = 464

 Score = 38.1 bits (87), Expect = 0.012
 Identities = 30/108 (27%), Positives = 51/108 (47%)
 Frame = +2

Query: 152 NGSTEEKALKARRRESDPAAALAAARHEFGEHGGVNMSIEASATFTVMEPDTMRRLFTGE 331
           N +T+       + E+  +  L    ++F     ++  +  +ATF   +P  +      E
Sbjct: 70  NNTTDSLNTMNIKEEASVSTLLVNLDNKFDPFDAMSTPLYQTATFK--QPSAI------E 121

Query: 332 LGPERGDLYIYSRHFNPTVLALGRQMAALEGTEAAYCTASGMSAISSV 475
            GP     Y Y+R  NPT  AL   +A L+  + A+C  SGM+A+S+V
Sbjct: 122 NGP-----YDYTRSGNPTRDALESLLAKLDKADRAFCFTSGMAALSAV 164



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>CYSD_SCHPO (O13326) O-acetylhomoserine (thiol)-lyase (EC 2.5.1.49)|
           (O-acetylhomoserine sulfhydrylase) (OAH sulfhydrylase)
           (Homocysteine synthase)
          Length = 429

 Score = 37.7 bits (86), Expect = 0.016
 Identities = 20/41 (48%), Positives = 25/41 (60%)
 Frame = +2

Query: 356 YIYSRHFNPTVLALGRQMAALEGTEAAYCTASGMSAISSVL 478
           YIYSR  NPT     +++AALE   AA  T+SG SA+   L
Sbjct: 55  YIYSRMMNPTADVFEKRIAALEHGAAAIATSSGTSALFMAL 95



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>METB_HELPY (P56069) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)|
           (O-succinylhomoserine (thiol)-lyase)
          Length = 380

 Score = 36.6 bits (83), Expect = 0.036
 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
 Frame = +2

Query: 245 HGGVNMSIEASA-TFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAALE 421
           HGG++      A +  + +  T R+     +G  +G  Y YSR  NPT  AL   +A LE
Sbjct: 9   HGGISEDATTGAVSVPIYQTSTYRQ---DAIGRHKG--YEYSRSGNPTRFALEELIADLE 63

Query: 422 GTEAAYCTASGMSAISSV 475
           G    +  ASG++ I +V
Sbjct: 64  GGVKGFAFASGLAGIHAV 81



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>MET17_YEAST (P06106) Protein MET17 [Includes: O-acetylhomoserine sulfhydrylase|
           (EC 2.5.1.49) (OAH sulfhydrylase) (Homocysteine
           synthase); O-acetylserine sulfhydrylase (EC 2.5.1.47)
           (OAS sulfhydrylase)]
          Length = 443

 Score = 36.2 bits (82), Expect = 0.047
 Identities = 18/36 (50%), Positives = 23/36 (63%)
 Frame = +2

Query: 356 YIYSRHFNPTVLALGRQMAALEGTEAAYCTASGMSA 463
           Y+YSR  NPT   L  ++AALEG  AA   +SG +A
Sbjct: 53  YVYSRFQNPTSNVLEERIAALEGGAAALAVSSGQAA 88



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>METB_ARATH (P55217) Cystathionine gamma-synthase, chloroplast precursor (EC|
           2.5.1.48) (CGS) (O-succinylhomoserine (thiol)-lyase)
          Length = 563

 Score = 36.2 bits (82), Expect = 0.047
 Identities = 18/47 (38%), Positives = 29/47 (61%)
 Frame = +2

Query: 341 ERGDLYIYSRHFNPTVLALGRQMAALEGTEAAYCTASGMSAISSVLM 481
           +R   + Y R+ NPT + L  +++ALEG E+    ASGM A + +L+
Sbjct: 219 KRSVSFEYGRYGNPTTVVLEDKISALEGAESTLVMASGMCASTVMLL 265



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>METB_ECOLI (P00935) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)|
           (O-succinylhomoserine (thiol)-lyase)
          Length = 386

 Score = 35.4 bits (80), Expect = 0.080
 Identities = 30/88 (34%), Positives = 41/88 (46%)
 Frame = +2

Query: 212 ALAAARHEFGEHGGVNMSIEASATFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVL 391
           A+ +  ++  ++G V   I  S+T+           FTG   P   D   YSR  NPT  
Sbjct: 9   AVRSGLNDDEQYGCVVPPIHLSSTYN----------FTGFNEPRAHD---YSRRGNPTRD 55

Query: 392 ALGRQMAALEGTEAAYCTASGMSAISSV 475
            + R +A LEG   A  T +GMSAI  V
Sbjct: 56  VVQRALAELEGGAGAVLTNTGMSAIHLV 83



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>CYSD_EMENI (P50125) O-acetylhomoserine (thiol)-lyase (EC 2.5.1.49)|
           (O-acetylhomoserine sulfhydrylase) (OAH sulfhydrylase)
           (Homocysteine synthase)
          Length = 437

 Score = 35.0 bits (79), Expect = 0.10
 Identities = 18/35 (51%), Positives = 23/35 (65%)
 Frame = +2

Query: 359 IYSRHFNPTVLALGRQMAALEGTEAAYCTASGMSA 463
           IYSR  NPTV    +++AALEG  AA   +SG +A
Sbjct: 57  IYSRIMNPTVDVFEKRIAALEGGVAAVAASSGQAA 91



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>METC_LACLC (P0A4K3) Cystathionine beta-lyase (EC 4.4.1.8) (CBL)|
           (Beta-cystathionase) (Cysteine lyase)
          Length = 380

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
 Frame = +2

Query: 245 HGGVNMSIEASA-TFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAALE 421
           HGG++      A +  + +  T ++   G+  P+    Y YSR  NPT  AL   +A LE
Sbjct: 10  HGGISTDKTTGAVSVPIYQTSTYKQNGLGQ--PKE---YEYSRSGNPTRHALEELIADLE 64

Query: 422 GTEAAYCTASGMSAISSVL 478
           G    +  +SG++ I +VL
Sbjct: 65  GGVQGFAFSSGLAGIHAVL 83



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>METC_LACLA (P0A4K2) Cystathionine beta-lyase (EC 4.4.1.8) (CBL)|
           (Beta-cystathionase) (Cysteine lyase)
          Length = 380

 Score = 33.1 bits (74), Expect = 0.40
 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
 Frame = +2

Query: 245 HGGVNMSIEASA-TFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAALE 421
           HGG++      A +  + +  T ++   G+  P+    Y YSR  NPT  AL   +A LE
Sbjct: 10  HGGISTDKTTGAVSVPIYQTSTYKQNGLGQ--PKE---YEYSRSGNPTRHALEELIADLE 64

Query: 422 GTEAAYCTASGMSAISSVL 478
           G    +  +SG++ I +VL
Sbjct: 65  GGVQGFAFSSGLAGIHAVL 83



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>METB_HERAU (P24601) Probable cystathionine gamma-synthase (EC 2.5.1.48) (CGS)|
           (O-succinylhomoserine (thiol)-lyase) (Fragment)
          Length = 319

 Score = 32.3 bits (72), Expect = 0.67
 Identities = 18/42 (42%), Positives = 26/42 (61%)
 Frame = +2

Query: 356 YIYSRHFNPTVLALGRQMAALEGTEAAYCTASGMSAISSVLM 481
           Y YSR  NPT  AL   +AALE  + A   ASG+ A +++++
Sbjct: 44  YEYSRTDNPTRTALQTCLAALEEAKHALVFASGLGASTTLML 85



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>CYS3_YEAST (P31373) Cystathionine gamma-lyase (EC 4.4.1.1)|
           (Gamma-cystathionase)
          Length = 393

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 22/78 (28%), Positives = 35/78 (44%)
 Frame = +2

Query: 245 HGGVNMSIEASATFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAALEG 424
           H G ++ +  S    V+EP ++   F           Y YSR  NP    L R +AALE 
Sbjct: 14  HAGEHVDVHGS----VIEPISLSTTFKQSSPANPIGTYEYSRSQNPNRENLERAVAALEN 69

Query: 425 TEAAYCTASGMSAISSVL 478
            +     +SG +  +++L
Sbjct: 70  AQYGLAFSSGSATTATIL 87



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>METB_MYCTU (P66875) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)|
           (O-succinylhomoserine (thiol)-lyase)
          Length = 388

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 27/77 (35%), Positives = 36/77 (46%)
 Frame = +2

Query: 248 GGVNMSIEASATFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAALEGT 427
           G VN+ I AS+TF               +G  RG  + Y+R  NPT  AL   +AA+E  
Sbjct: 30  GAVNVPIYASSTFA-----------QDGVGGLRGG-FEYARTGNPTRAALEASLAAVEEG 77

Query: 428 EAAYCTASGMSAISSVL 478
             A   +SGM+A    L
Sbjct: 78  AFARAFSSGMAATDCAL 94



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>METB_MYCBO (P66876) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)|
           (O-succinylhomoserine (thiol)-lyase)
          Length = 388

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 27/77 (35%), Positives = 36/77 (46%)
 Frame = +2

Query: 248 GGVNMSIEASATFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAALEGT 427
           G VN+ I AS+TF               +G  RG  + Y+R  NPT  AL   +AA+E  
Sbjct: 30  GAVNVPIYASSTFA-----------QDGVGGLRGG-FEYARTGNPTRAALEASLAAVEEG 77

Query: 428 EAAYCTASGMSAISSVL 478
             A   +SGM+A    L
Sbjct: 78  AFARAFSSGMAATDCAL 94



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>CGL_RAT (P18757) Cystathionine gamma-lyase (EC 4.4.1.1)|
           (Gamma-cystathionase) (Probasin-related antigen)
           (PRB-RA)
          Length = 398

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = +2

Query: 338 PERGDLYIYSRHFNPTVLALGRQMAALEGTEAAYCTASGMSAISSV 475
           P +   ++YSR  NPT   L + +AAL+G +     A G++A +++
Sbjct: 51  PGQSSGFVYSRSGNPTRNCLEKAVAALDGAKHCLTFARGLAATTTI 96



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>CGL_MOUSE (Q8VCN5) Cystathionine gamma-lyase (EC 4.4.1.1)|
           (Gamma-cystathionase)
          Length = 398

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 16/46 (34%), Positives = 27/46 (58%)
 Frame = +2

Query: 338 PERGDLYIYSRHFNPTVLALGRQMAALEGTEAAYCTASGMSAISSV 475
           P +   + YSR  NPT   L + +AAL+G + +   ASG++A  ++
Sbjct: 51  PGQSSGFEYSRSGNPTRNCLEKAVAALDGAKHSLAFASGLAATITI 96



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>CGL_MACFA (Q60HG7) Cystathionine gamma-lyase (EC 4.4.1.1)|
           (Gamma-cystathionase)
          Length = 405

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 16/49 (32%), Positives = 27/49 (55%)
 Frame = +2

Query: 329 ELGPERGDLYIYSRHFNPTVLALGRQMAALEGTEAAYCTASGMSAISSV 475
           +  P +   + YSR  NPT   L + +AAL+G +     ASG++A  ++
Sbjct: 49  QAAPGQHSGFEYSRSGNPTRNCLEKAVAALDGAKYCLAFASGLAATVTI 97



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>CGL_CAEEL (P55216) Putative cystathionine gamma-lyase (EC 4.4.1.1)|
           (Gamma-cystathionase)
          Length = 392

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = +2

Query: 362 YSRHFNPTVLALGRQMAALEGTEAAYCTASGMSAISSVL 478
           YSR  NPT   L + +AALE  +     +SG++A S+++
Sbjct: 49  YSRAGNPTRDVLQKNLAALEDAKHCQVFSSGLAATSAII 87



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>UL56_HHV11 (P10240) Protein UL56|
          Length = 197

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 21/70 (30%), Positives = 30/70 (42%)
 Frame = +2

Query: 119 PTPQNDGFGDDNGSTEEKALKARRRESDPAAALAAARHEFGEHGGVNMSIEASATFTVME 298
           PT   +G   + G + + A +A RR +   A   A R  FG  G +   +    T  V  
Sbjct: 64  PTSSGEGEASERGRSRQAAQRAARR-ARRRAERRAQRRSFGPGGLLATPLFLPETRLVAP 122

Query: 299 PDTMRRLFTG 328
           PD  R L +G
Sbjct: 123 PDITRDLLSG 132



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>CGL_HUMAN (P32929) Cystathionine gamma-lyase (EC 4.4.1.1)|
           (Gamma-cystathionase)
          Length = 405

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +2

Query: 362 YSRHFNPTVLALGRQMAALEGTEAAYCTASGMSAISSV 475
           YSR  NPT   L + +AAL+G +     ASG++A  ++
Sbjct: 60  YSRSGNPTRNCLEKAVAALDGAKYCLAFASGLAATVTI 97



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>ATR_KLULA (Q6CT34) Serine/threonine-protein kinase MEC1 (EC 2.7.11.1)|
           (DNA-damage checkpoint kinase MEC1) (Mitosis entry
           checkpoint protein 1) (ATR homolog)
          Length = 2287

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 29/107 (27%), Positives = 41/107 (38%), Gaps = 2/107 (1%)
 Frame = +2

Query: 143 GDDNGSTEEKALKARRRESDPAAALAAARHEFGEHGGVNMSIEASATFTVMEPDTMRRLF 322
           G+D    EEK LK   R S    A+A  +H F        SIE   T  +      R+ +
Sbjct: 661 GNDKSLVEEKKLKLLDRNSRQIFAVALVKHGF-------FSIETIQTLFLNTAPKFRKNY 713

Query: 323 TGELGPERGDLYIYSRHFNPTVLALGRQMAALEG--TEAAYCTASGM 457
                     LY+        VL + +Q+  L+G  TE   C  S +
Sbjct: 714 I--------TLYLPDYKTLAEVLKMSKQILTLDGQITETERCVLSSL 752



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>FTHS_STAAW (Q8NW37) Formate--tetrahydrofolate ligase (EC 6.3.4.3)|
           (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)
          Length = 555

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +2

Query: 137 GFGDDNGSTEEKALKARRRESDPAAALAAAR-HEFGEHGGV 256
           GFG D G+ +   +KAR    DPAA +  A       HGGV
Sbjct: 300 GFGSDLGAEKFMDIKAREAGFDPAAVVVVATIRALKMHGGV 340



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>FTHS_STAAS (Q6G8J5) Formate--tetrahydrofolate ligase (EC 6.3.4.3)|
           (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)
          Length = 555

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +2

Query: 137 GFGDDNGSTEEKALKARRRESDPAAALAAAR-HEFGEHGGV 256
           GFG D G+ +   +KAR    DPAA +  A       HGGV
Sbjct: 300 GFGSDLGAEKFMDIKAREAGFDPAAVVVVATIRALKMHGGV 340



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>FTHS_STAAR (Q6GFX6) Formate--tetrahydrofolate ligase (EC 6.3.4.3)|
           (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)
          Length = 555

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +2

Query: 137 GFGDDNGSTEEKALKARRRESDPAAALAAAR-HEFGEHGGV 256
           GFG D G+ +   +KAR    DPAA +  A       HGGV
Sbjct: 300 GFGSDLGAEKFMDIKAREAGFDPAAVVVVATIRALKMHGGV 340



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>SEMG1_HUMAN (P04279) Semenogelin-1 precursor (Semenogelin I) (SGI) [Contains:|
           Alpha-inhibin-92; Alpha-inhibin-31; Seminal basic
           protein]
          Length = 462

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 19/83 (22%), Positives = 36/83 (43%)
 Frame = +2

Query: 110 LKRPTPQNDGFGDDNGSTEEKALKARRRESDPAAALAAARHEFGEHGGVNMSIEASATFT 289
           ++ P P+ + +  +N   E    ++  RE D  +     RH+ G HGG+++ I       
Sbjct: 388 IQAPNPKQEPWHGENAKGESG--QSTNREQDLLSHEQKGRHQHGSHGGLDIVI------- 438

Query: 290 VMEPDTMRRLFTGELGPERGDLY 358
           + + D   R     L  +R  L+
Sbjct: 439 IEQEDDSDRHLAQHLNNDRNPLF 461



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>LEU3_SYMTH (Q67JY2) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM|
           dehydrogenase) (IMDH) (3-IPM-DH)
          Length = 368

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
 Frame = +2

Query: 59  PTVPMAHVLAAAEPLTLLKRPTP-----QNDGFGDDNGSTEEKALKARRRESDPAAALAA 223
           P V + H+LA    + +L+RP        ++ FGD    ++E A+        P+A+L A
Sbjct: 218 PDVEVEHLLADNAAMQILRRPGDFDVMLASNLFGDF--LSDEAAMLTGSIGLLPSASLGA 275

Query: 224 ARHEFGEHGGVNMSIEASA 280
           AR+ FG   G    I  SA
Sbjct: 276 ARNRFGLPKGFYEPIHGSA 294



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>METB_HAEIN (P44502) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)|
           (O-succinylhomoserine (thiol)-lyase)
          Length = 369

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 16/51 (31%), Positives = 25/51 (49%)
 Frame = +2

Query: 326 GELGPERGDLYIYSRHFNPTVLALGRQMAALEGTEAAYCTASGMSAISSVL 478
           G  G      + Y+R  NPT   L   +A LE  +  +  +SGM+AI  ++
Sbjct: 36  GHCGIGESTGFDYTRTKNPTRTVLEETIAKLENGDRGFAFSSGMAAIQVLM 86



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>RS16_RHILO (Q98E70) 30S ribosomal protein S16|
          Length = 133

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = +2

Query: 41  KHPVIRPTVPMAHVLAAAEPLTLLKRPTPQNDGFGDDNGSTEEKALKARRRESDPAAALA 220
           KH +     P   VL   +   L KR    N    +     +E+A   ++ + D AAA+A
Sbjct: 59  KHWLSHGAQPTDRVLRFLDEAGLAKRDARSNPKKAEPGKKAQERAALLKKAQEDAAAAVA 118

Query: 221 AA 226
           AA
Sbjct: 119 AA 120



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>ACON_MYCAV (O08451) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)|
           (Aconitase)
          Length = 961

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
 Frame = +2

Query: 119 PTPQNDGFGDDNGSTEEKALKARRRESDPAAALAAARHEFG-EHGGVNMSIEASATFTVM 295
           P   ++G  DD  + +  A  A  R S+P    +    EF  +HG V ++   S T T  
Sbjct: 445 PGAPSNGHADDLPAVQSAAAHANGRPSNPVTVRSDELGEFVLDHGAVVIAAVTSCTNT-S 503

Query: 296 EPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQM 409
            P+ M  L    L  +R +  + S+ +  T +A G Q+
Sbjct: 504 NPEVM--LGAALLARQRVEKGLASKPWVKTTMAPGSQV 539



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>RS16_RHIME (Q92L43) 30S ribosomal protein S16|
          Length = 124

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 16/65 (24%), Positives = 29/65 (44%)
 Frame = +2

Query: 41  KHPVIRPTVPMAHVLAAAEPLTLLKRPTPQNDGFGDDNGSTEEKALKARRRESDPAAALA 220
           +H + +   P   V+   +   L KRP   N          +E+A +A+++  + AAA +
Sbjct: 60  QHWIAQGAQPTDRVMRFLDQAGLAKRPARNNPTKAQPGKKAQERAAEAKQKAEEAAAAAS 119

Query: 221 AARHE 235
            A  E
Sbjct: 120 EAAAE 124



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>CYSA_STRCO (Q59829) Putative cystathionine gamma-lyase (EC 4.4.1.1)|
           (Gamma-cystathionase)
          Length = 392

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 22/45 (48%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
 Frame = +2

Query: 356 YIYSRHFNPTVLALGRQMAALEGT-EAAYCT---ASGMSAISSVL 478
           Y Y R  NPT   L   +  LE   EA   T   ASGM+AISSVL
Sbjct: 61  YTYGRDENPTWTRLESAIGELEAPGEAGVETLVFASGMAAISSVL 105



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>FTHS_STAES (Q8CNV9) Formate--tetrahydrofolate ligase (EC 6.3.4.3)|
           (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)
          Length = 555

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +2

Query: 137 GFGDDNGSTEEKALKARRRESDPAAALAAAR-HEFGEHGGV 256
           GFG D G+ +   +KAR    DP+A +  A       HGGV
Sbjct: 300 GFGSDLGAEKFMNIKAREAGFDPSAVVVVATIRALKMHGGV 340



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>FTHS_STAEQ (Q5HNH4) Formate--tetrahydrofolate ligase (EC 6.3.4.3)|
           (Formyltetrahydrofolate synthetase) (FHS) (FTHFS)
          Length = 555

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +2

Query: 137 GFGDDNGSTEEKALKARRRESDPAAALAAAR-HEFGEHGGV 256
           GFG D G+ +   +KAR    DP+A +  A       HGGV
Sbjct: 300 GFGSDLGAEKFMNIKAREAGFDPSAVVVVATIRALKMHGGV 340


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,186,389
Number of Sequences: 219361
Number of extensions: 684207
Number of successful extensions: 2617
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 2553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2611
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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