ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast75e08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY105889.1| Zea mays PCO106909 mRNA sequence 76 1e-10
2dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.024
3dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.024
4emb|X64173.1|ZDHRGP Z.diploperennis gene for hydroxyproline-rich... 48 0.024
5dbj|AK103715.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.024
6gb|AY103616.1| Zea mays PCO091178 mRNA sequence 48 0.024
7gb|AF467918.1| Danio rerio cardiac troponin T mRNA, complete cds... 46 0.095
8ref|XM_500428.1| Yarrowia lipolytica CLIB122, YALI0B02544g predi... 44 0.37
9emb|CT033781.12| Mouse DNA sequence from clone RP24-85H21 on chr... 44 0.37
10emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 44 0.37
11ref|XM_475550.1| Oryza sativa (japonica cultivar-group), predic... 42 1.5
12gb|BT016325.1| Zea mays clone Contig158 mRNA sequence 42 1.5
13gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
14gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
15gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
16dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
17dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
18dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
19dbj|AK120637.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
20dbj|AK104366.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
21dbj|AK104199.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
22dbj|AK071658.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
23dbj|AK070043.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
24dbj|AK066245.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
25gb|AY104589.1| Zea mays PCO067801 mRNA sequence 42 1.5
26gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 42 1.5
27gb|AY369075.1| Bos taurus retinyl ester hydrolase type 1 (BREH1)... 40 5.8
28ref|XM_507384.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.8
29ref|XM_507383.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.8
30ref|XM_507382.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.8
31ref|XM_478841.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.8
32ref|XM_507381.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.8
33ref|XM_507380.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.8
34ref|XM_507379.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.8
35ref|XM_506426.2| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.8
36gb|BC079323.1| Rattus norvegicus RAB21, member RAS oncogene fami... 40 5.8
37ref|NM_001012287.1| Bos taurus retinyl ester hydrolase type 1 (B... 40 5.8
38gb|AC161170.7| Mus musculus chromosome 1, clone RP23-307G23, com... 40 5.8
39gb|AC126271.4| Mus musculus BAC clone RP23-237H9 from chromosome... 40 5.8
40gb|AC008060.5| Homo sapiens PAC clone RP5-912I13 from 7, complet... 40 5.8
41emb|AL672142.9| Human DNA sequence from clone RP11-101E3 on chro... 40 5.8
42gb|AC091153.10| Homo sapiens chromosome 17, clone RP11-314A20, c... 40 5.8
43gb|AC091402.2| Sus scrofa clone RP44-363K13, complete sequence 40 5.8
44gb|AC118754.6| Homo sapiens, clone RP11-141J13, complete sequence 40 5.8
45gb|AC027763.9| Homo sapiens chromosome 17, clone RP11-530N7, com... 40 5.8
46gb|BC102781.1| Bos taurus retinyl ester hydrolase type 1, mRNA (... 40 5.8
47gb|S45164.1| hydroxyproline-rich glycoprotein [maize, Genomic, 1... 40 5.8
48dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
49gb|AC034305.6|AC034305 Homo sapiens chromosome 17, clone RP11-60... 40 5.8
50gb|AC079818.56| Mus musculus strain C57BL/6J chromosome 10 clone... 40 5.8
51ref|NM_001004238.1| Rattus norvegicus RAB21, member RAS oncogene... 40 5.8
52dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.8
53dbj|AK119176.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
54emb|X63134.1|ZMHRGP Z.mays HRGP gene 40 5.8
55emb|AJ131535.1|ZMA131535 Zea mays HRGP gene, AC1503 line 40 5.8
56gb|AF164960.1|AF164960 Streptomyces fradiae strain T#2717 urdamy... 40 5.8
57dbj|AK104651.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
58dbj|AK104608.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
59dbj|AK104283.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
60dbj|AK104177.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
61dbj|AK104127.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
62dbj|AK104016.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
63dbj|AK103966.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
64dbj|AK070051.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
65gb|DQ184948.1| Malus x domestica putative receptor kinase (DIPM1... 40 5.8
66dbj|AK060987.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.8
67gb|AC159020.2| Pan troglodytes BAC clone CH251-530A5 from chromo... 40 5.8 
>gb|AY105889.1| Zea mays PCO106909 mRNA sequence
          Length = 1420

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                     
Query: 102 ctgcgactgcgacaaccccaaggcccccaagccttcccacccgcccaagaccaagccc 159
           |||||||||||| || |||||||| |||||||| || |||||||||||||||||||||
Sbjct: 158 ctgcgactgcgataaacccaaggcgcccaagccgtcgcacccgcccaagaccaagccc 215



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Plus

                                                           
Query: 313 ccgccggtctacggcccgcccaagggccccgtcacacgcccgccggtc 360
           |||||||||  ||| || ||||||||||||||||| ||||||||||||
Sbjct: 372 ccgccggtcgtcggtcctcccaagggccccgtcacgcgcccgccggtc 419



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 324 cggcccgcccaagggccccgtcacacgcccgcc 356
           |||||| ||||||||||||||||| ||||||||
Sbjct: 329 cggccctcccaagggccccgtcacgcgcccgcc 361



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 274 ccgccggtcgtcggcccgccgaagggccacgtcccccgcccgccggtc 321
           |||||||||||||| || || ||||||| |||| | ||||||||||||
Sbjct: 372 ccgccggtcgtcggtcctcccaagggccccgtcacgcgcccgccggtc 419



 Score = 48.1 bits (24), Expect = 0.024
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                           
Query: 235 ccgccggtcgtcggcccgccgaagggccacctcccgcgcccgccggtc 282
           |||||||||||||| || || ||||||| | || ||||||||||||||
Sbjct: 372 ccgccggtcgtcggtcctcccaagggccccgtcacgcgcccgccggtc 419



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 277 ccggtcgtcggcccgccgaagggccacgtcccccgcccgcc 317
           |||||||||||||| || ||||||| |||| | ||||||||
Sbjct: 321 ccggtcgtcggccctcccaagggccccgtcacgcgcccgcc 361



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 238 ccggtcgtcggcccgccgaagggccacctcccgcgcccgcc 278
           |||||||||||||| || ||||||| | || ||||||||||
Sbjct: 321 ccggtcgtcggccctcccaagggccccgtcacgcgcccgcc 361
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                                
Query: 373      gtcgtcgtcgggccgccggtgacctaccccac 404
                ||||||||||| |||||||| |||||||||||
Sbjct: 25843883 gtcgtcgtcggcccgccggtcacctaccccac 25843914



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 103      tgcgactgcgacaaccccaaggcccccaagccttcccaccc 143
                |||||||||||||| ||||||  ||||||||| || |||||
Sbjct: 25843643 tgcgactgcgacaagcccaagcaccccaagccctcgcaccc 25843683



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                    
Query: 373      gtcgtcgtcgggccgccggtgacctaccccacgccg 408
                ||||||||||| || ||||| |||||||| ||||||
Sbjct: 25843937 gtcgtcgtcggccctccggtcacctacccgacgccg 25843972



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 184      cccaagggccctacctacccgtcgccgg 211
                ||||||||||| ||||||||||| ||||
Sbjct: 25843736 cccaagggccccacctacccgtctccgg 25843763
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>dbj|AP003523.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0416A11
          Length = 171519

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                              
Query: 373    gtcgtcgtcgggccgccggtgacctaccccac 404
              ||||||||||| |||||||| |||||||||||
Sbjct: 126087 gtcgtcgtcggcccgccggtcacctaccccac 126118



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                       
Query: 103    tgcgactgcgacaaccccaaggcccccaagccttcccaccc 143
              |||||||||||||| ||||||  ||||||||| || |||||
Sbjct: 125847 tgcgactgcgacaagcccaagcaccccaagccctcgcaccc 125887



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 373    gtcgtcgtcgggccgccggtgacctaccccacgccg 408
              ||||||||||| || ||||| |||||||| ||||||
Sbjct: 126141 gtcgtcgtcggccctccggtcacctacccgacgccg 126176



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 184    cccaagggccctacctacccgtcgccgg 211
              ||||||||||| ||||||||||| ||||
Sbjct: 125940 cccaagggccccacctacccgtctccgg 125967
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>emb|X64173.1|ZDHRGP Z.diploperennis gene for hydroxyproline-rich glycoprotein
          Length = 4478

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                        
Query: 154  aagccccccaccaagggccccaagccgg 181
            ||||||||||||||||| ||||||||||
Sbjct: 2771 aagccccccaccaaggggcccaagccgg 2798
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>dbj|AK103715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033137N14, full
           insert sequence
          Length = 1338

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 30/32 (93%)
 Strand = Plus / Plus

                                           
Query: 373 gtcgtcgtcgggccgccggtgacctaccccac 404
           ||||||||||| |||||||| |||||||||||
Sbjct: 428 gtcgtcgtcggcccgccggtcacctaccccac 459



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 103 tgcgactgcgacaaccccaaggcccccaagccttcccaccc 143
           |||||||||||||| ||||||  ||||||||| || |||||
Sbjct: 188 tgcgactgcgacaagcccaagcaccccaagccctcgcaccc 228



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                               
Query: 373 gtcgtcgtcgggccgccggtgacctaccccacgccg 408
           ||||||||||| || ||||| |||||||| ||||||
Sbjct: 482 gtcgtcgtcggccctccggtcacctacccgacgccg 517



 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 184 cccaagggccctacctacccgtcgccgg 211
           ||||||||||| ||||||||||| ||||
Sbjct: 281 cccaagggccccacctacccgtctccgg 308
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>gb|AY103616.1| Zea mays PCO091178 mRNA sequence
          Length = 1634

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                       
Query: 154 aagccccccaccaagggccccaagccgg 181
           ||||||||||||||||| ||||||||||
Sbjct: 210 aagccccccaccaaggggcccaagccgg 237
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>gb|AF467918.1| Danio rerio cardiac troponin T mRNA, complete cds, alternatively
           spliced
          Length = 1008

 Score = 46.1 bits (23), Expect = 0.095
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 46  ctcctgctgaccctcctcctgctcctc 72
           |||||||||| ||||||||||||||||
Sbjct: 108 ctcctgctgagcctcctcctgctcctc 82
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>ref|XM_500428.1| Yarrowia lipolytica CLIB122, YALI0B02544g predicted mRNA
          Length = 4458

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 47   tcctgctgaccctcctcctgct 68
            ||||||||||||||||||||||
Sbjct: 2417 tcctgctgaccctcctcctgct 2396
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>emb|CT033781.12| Mouse DNA sequence from clone RP24-85H21 on chromosome 13, complete
              sequence
          Length = 206653

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 43     ccgctcctgctgaccctcctcctgctcctc 72
              ||||||||||||  ||||||||||||||||
Sbjct: 181079 ccgctcctgctgctcctcctcctgctcctc 181050
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>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 47     tcctgctgaccctcctcctgct 68
              ||||||||||||||||||||||
Sbjct: 385517 tcctgctgaccctcctcctgct 385538
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>ref|XM_475550.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2316

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 77   ccgccgtcgcggcgcccgcca 97
            |||||||||||||||||||||
Sbjct: 1060 ccgccgtcgcggcgcccgcca 1040
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>gb|BT016325.1| Zea mays clone Contig158 mRNA sequence
          Length = 1172

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 64  ctgctcctcaccaccgccgtc 84
           |||||||||||||||||||||
Sbjct: 287 ctgctcctcaccaccgccgtc 307
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>gb|AC135418.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0035J16,
              complete sequence
          Length = 170233

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 64     ctgctcctcaccaccgccgtc 84
              |||||||||||||||||||||
Sbjct: 149546 ctgctcctcaccaccgccgtc 149526
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>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0006J12, complete sequence
          Length = 157069

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 64    ctgctcctcaccaccgccgtc 84
             |||||||||||||||||||||
Sbjct: 46909 ctgctcctcaccaccgccgtc 46889
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>gb|AC134931.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0079L11, complete sequence
          Length = 124104

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 77    ccgccgtcgcggcgcccgcca 97
             |||||||||||||||||||||
Sbjct: 57051 ccgccgtcgcggcgcccgcca 57031
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 64       ctgctcctcaccaccgccgtc 84
                |||||||||||||||||||||
Sbjct: 19446197 ctgctcctcaccaccgccgtc 19446177



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 77      ccgccgtcgcggcgcccgcca 97
               |||||||||||||||||||||
Sbjct: 1395389 ccgccgtcgcggcgcccgcca 1395369
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 228     cccgcgcccgccggtcgtcgg 248
               |||||||||||||||||||||
Sbjct: 7875389 cccgcgcccgccggtcgtcgg 7875409



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 267     cccgcgcccgccggtcgtcgg 287
               |||||||||||||||||||||
Sbjct: 7875389 cccgcgcccgccggtcgtcgg 7875409
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>dbj|AP003201.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1066G12
          Length = 136263

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 267   cccgcgcccgccggtcgtcgg 287
             |||||||||||||||||||||
Sbjct: 70335 cccgcgcccgccggtcgtcgg 70355



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 228   cccgcgcccgccggtcgtcgg 248
             |||||||||||||||||||||
Sbjct: 70335 cccgcgcccgccggtcgtcgg 70355
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>dbj|AK120637.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153K02, full
            insert sequence
          Length = 2511

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 77   ccgccgtcgcggcgcccgcca 97
            |||||||||||||||||||||
Sbjct: 1070 ccgccgtcgcggcgcccgcca 1050
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>dbj|AK104366.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D07, full
           insert sequence
          Length = 1060

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 64  ctgctcctcaccaccgccgtc 84
           |||||||||||||||||||||
Sbjct: 279 ctgctcctcaccaccgccgtc 299
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>dbj|AK104199.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A08, full
           insert sequence
          Length = 1060

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 64  ctgctcctcaccaccgccgtc 84
           |||||||||||||||||||||
Sbjct: 279 ctgctcctcaccaccgccgtc 299
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>dbj|AK071658.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102N05, full
           insert sequence
          Length = 703

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 267 cccgcgcccgccggtcgtcgg 287
           |||||||||||||||||||||
Sbjct: 153 cccgcgcccgccggtcgtcgg 173



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 228 cccgcgcccgccggtcgtcgg 248
           |||||||||||||||||||||
Sbjct: 153 cccgcgcccgccggtcgtcgg 173
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>dbj|AK070043.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039E14, full
           insert sequence
          Length = 1106

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 64  ctgctcctcaccaccgccgtc 84
           |||||||||||||||||||||
Sbjct: 280 ctgctcctcaccaccgccgtc 300
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>dbj|AK066245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051L10, full
           insert sequence
          Length = 2539

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 267 cccgcgcccgccggtcgtcgg 287
           |||||||||||||||||||||
Sbjct: 152 cccgcgcccgccggtcgtcgg 172



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 228 cccgcgcccgccggtcgtcgg 248
           |||||||||||||||||||||
Sbjct: 152 cccgcgcccgccggtcgtcgg 172
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>gb|AY104589.1| Zea mays PCO067801 mRNA sequence
          Length = 1197

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 64  ctgctcctcaccaccgccgtc 84
           |||||||||||||||||||||
Sbjct: 333 ctgctcctcaccaccgccgtc 353
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 48     cctgctgaccctcctcctgctcctc 72
              ||||||||||||||||| |||||||
Sbjct: 914658 cctgctgaccctcctcccgctcctc 914634
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>gb|AY369075.1| Bos taurus retinyl ester hydrolase type 1 (BREH1) mRNA, complete
           cds
          Length = 1704

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 42  tccgctcctgctgaccctcc 61
           ||||||||||||||||||||
Sbjct: 680 tccgctcctgctgaccctcc 661
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>ref|XM_507384.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
          mRNA
          Length = 1062

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 72 caccaccgccgtcgcggcgc 91
          ||||||||||||||||||||
Sbjct: 53 caccaccgccgtcgcggcgc 72
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>ref|XM_507383.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
          mRNA
          Length = 1059

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 72 caccaccgccgtcgcggcgc 91
          ||||||||||||||||||||
Sbjct: 54 caccaccgccgtcgcggcgc 73
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>ref|XM_507382.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
          mRNA
          Length = 1058

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 72 caccaccgccgtcgcggcgc 91
          ||||||||||||||||||||
Sbjct: 56 caccaccgccgtcgcggcgc 75
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>ref|XM_478841.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1047

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 72 caccaccgccgtcgcggcgc 91
          ||||||||||||||||||||
Sbjct: 59 caccaccgccgtcgcggcgc 78
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>ref|XM_507381.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
          mRNA
          Length = 1061

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 72 caccaccgccgtcgcggcgc 91
          ||||||||||||||||||||
Sbjct: 59 caccaccgccgtcgcggcgc 78
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>ref|XM_507380.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
          mRNA
          Length = 1065

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 72 caccaccgccgtcgcggcgc 91
          ||||||||||||||||||||
Sbjct: 60 caccaccgccgtcgcggcgc 79
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>ref|XM_507379.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
          mRNA
          Length = 1069

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 72 caccaccgccgtcgcggcgc 91
          ||||||||||||||||||||
Sbjct: 60 caccaccgccgtcgcggcgc 79
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>ref|XM_506426.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1065_B06.19-1
          mRNA
          Length = 1068

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 72 caccaccgccgtcgcggcgc 91
          ||||||||||||||||||||
Sbjct: 63 caccaccgccgtcgcggcgc 82
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>gb|BC079323.1| Rattus norvegicus RAB21, member RAS oncogene family, mRNA (cDNA
           clone MGC:94502 IMAGE:7135453), complete cds
          Length = 1515

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 72  caccaccgccgtcgcggcgcccgc 95
           ||||||||||| ||||||||||||
Sbjct: 174 caccaccgccgccgcggcgcccgc 151
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>ref|NM_001012287.1| Bos taurus retinyl ester hydrolase type 1 (BREH1), mRNA
          Length = 1704

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 42  tccgctcctgctgaccctcc 61
           ||||||||||||||||||||
Sbjct: 680 tccgctcctgctgaccctcc 661
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>gb|AC161170.7| Mus musculus chromosome 1, clone RP23-307G23, complete sequence
          Length = 222820

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 45     gctcctgctgaccctcctcctgctcctc 72
              ||||||||||  ||||||||||||||||
Sbjct: 167125 gctcctgctgctcctcctcctgctcctc 167152
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>gb|AC126271.4| Mus musculus BAC clone RP23-237H9 from chromosome 5, complete sequence
          Length = 194736

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 45     gctcctgctgaccctcctcctgctcctc 72
              |||||| |||| ||||||||||||||||
Sbjct: 145132 gctcctcctgatcctcctcctgctcctc 145159
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>gb|AC008060.5| Homo sapiens PAC clone RP5-912I13 from 7, complete sequence
          Length = 161566

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 56     ccctcctcctgctcctcacc 75
              ||||||||||||||||||||
Sbjct: 148852 ccctcctcctgctcctcacc 148833
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>emb|AL672142.9| Human DNA sequence from clone RP11-101E3 on chromosome 9 Contains the
             5' end of the CCBL1 gene for cysteine conjugate-beta
             lyase; cytoplasmic (glutamine  transaminase K, kyneurenine
             aminotransferase),  the LRRC8 gene for leucine-rich
             repeat-containing 8, the PHYHD1 gene for phytanoyl-CoA
             dioxygenase domain containing 1, the TMEM15 gene for
             transmembrane protein 15, the 5' end of the NUP188 gene
             for nucleoporin 188kDa and three CpG islands, complete
             sequence
          Length = 132179

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    ccctcctcctgctcctcacc 75
             ||||||||||||||||||||
Sbjct: 24497 ccctcctcctgctcctcacc 24478
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>gb|AC091153.10| Homo sapiens chromosome 17, clone RP11-314A20, complete sequence
          Length = 195494

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 49     ctgctgaccctcctcctgctcctc 72
              ||||||||||||||||||| ||||
Sbjct: 154519 ctgctgaccctcctcctgcccctc 154542
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>gb|AC091402.2| Sus scrofa clone RP44-363K13, complete sequence
          Length = 164663

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 59     tcctcctgctcctcaccacc 78
              ||||||||||||||||||||
Sbjct: 120039 tcctcctgctcctcaccacc 120020
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>gb|AC118754.6| Homo sapiens, clone RP11-141J13, complete sequence
          Length = 185378

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 49    ctgctgaccctcctcctgctcctc 72
             ||||||||||||||||||| ||||
Sbjct: 33625 ctgctgaccctcctcctgcccctc 33648
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>gb|AC027763.9| Homo sapiens chromosome 17, clone RP11-530N7, complete sequence
          Length = 169770

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 49     ctgctgaccctcctcctgctcctc 72
              ||||||||||||||||||| ||||
Sbjct: 136441 ctgctgaccctcctcctgcccctc 136418
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>gb|BC102781.1| Bos taurus retinyl ester hydrolase type 1, mRNA (cDNA clone
           MGC:127143 IMAGE:7944112), complete cds
          Length = 1920

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 42  tccgctcctgctgaccctcc 61
           ||||||||||||||||||||
Sbjct: 732 tccgctcctgctgaccctcc 713
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>gb|S45164.1| hydroxyproline-rich glycoprotein [maize, Genomic, 1703 nt]
          Length = 1703

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 154 aagccccccaccaagggccccaagccgg 181
           ||||||||||||||||| || |||||||
Sbjct: 301 aagccccccaccaaggggccgaagccgg 328
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 72       caccaccgccgtcgcggcgc 91
                ||||||||||||||||||||
Sbjct: 23304271 caccaccgccgtcgcggcgc 23304290
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>gb|AC034305.6|AC034305 Homo sapiens chromosome 17, clone RP11-609D21, complete sequence
          Length = 103699

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 49    ctgctgaccctcctcctgctcctc 72
             ||||||||||||||||||| ||||
Sbjct: 94460 ctgctgaccctcctcctgcccctc 94483
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>gb|AC079818.56| Mus musculus strain C57BL/6J chromosome 10 clone rp23-362c8, complete
              sequence
          Length = 238658

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 45     gctcctgctgaccctcctcctgctcctc 72
              ||||||||||  ||||||||||||||||
Sbjct: 160104 gctcctgctgctcctcctcctgctcctc 160131
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>ref|NM_001004238.1| Rattus norvegicus RAB21, member RAS oncogene family (Rab21), mRNA
          Length = 1515

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 72  caccaccgccgtcgcggcgcccgc 95
           ||||||||||| ||||||||||||
Sbjct: 174 caccaccgccgccgcggcgcccgc 151
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>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1065_B06
          Length = 113170

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    caccaccgccgtcgcggcgc 91
             ||||||||||||||||||||
Sbjct: 59529 caccaccgccgtcgcggcgc 59548
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>dbj|AK119176.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F08,
          full insert sequence
          Length = 1088

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 72 caccaccgccgtcgcggcgc 91
          ||||||||||||||||||||
Sbjct: 74 caccaccgccgtcgcggcgc 93
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>emb|X63134.1|ZMHRGP Z.mays HRGP gene
          Length = 1954

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 154 aagccccccaccaagggccccaagccgg 181
           ||||||||||||||||| || |||||||
Sbjct: 651 aagccccccaccaaggggccgaagccgg 678
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>emb|AJ131535.1|ZMA131535 Zea mays HRGP gene, AC1503 line
          Length = 3735

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 154  aagccccccaccaagggccccaagccgg 181
            ||||||||||||||||| || |||||||
Sbjct: 2333 aagccccccaccaaggggccgaagccgg 2360
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>gb|AF164960.1|AF164960 Streptomyces fradiae strain T#2717 urdamycin biosynthetic gene
            cluster, partial sequence
          Length = 8018

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 63   cctgctcctcaccaccgccgtcgc 86
            ||||||||||| ||||||||||||
Sbjct: 4102 cctgctcctcatcaccgccgtcgc 4125
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>dbj|AK104651.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-B06,
          full insert sequence
          Length = 1069

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 72 caccaccgccgtcgcggcgc 91
          ||||||||||||||||||||
Sbjct: 60 caccaccgccgtcgcggcgc 79
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>dbj|AK104608.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C01,
          full insert sequence
          Length = 1065

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 72 caccaccgccgtcgcggcgc 91
          ||||||||||||||||||||
Sbjct: 60 caccaccgccgtcgcggcgc 79
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>dbj|AK104283.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-H09, full
           insert sequence
          Length = 1080

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 72  caccaccgccgtcgcggcgc 91
           ||||||||||||||||||||
Sbjct: 90  caccaccgccgtcgcggcgc 109
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>dbj|AK104177.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D02,
          full insert sequence
          Length = 1058

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 72 caccaccgccgtcgcggcgc 91
          ||||||||||||||||||||
Sbjct: 56 caccaccgccgtcgcggcgc 75
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>dbj|AK104127.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E10,
          full insert sequence
          Length = 1061

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 72 caccaccgccgtcgcggcgc 91
          ||||||||||||||||||||
Sbjct: 59 caccaccgccgtcgcggcgc 78
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>dbj|AK104016.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-G05,
          full insert sequence
          Length = 1062

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 72 caccaccgccgtcgcggcgc 91
          ||||||||||||||||||||
Sbjct: 53 caccaccgccgtcgcggcgc 72
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>dbj|AK103966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H03,
          full insert sequence
          Length = 1059

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 72 caccaccgccgtcgcggcgc 91
          ||||||||||||||||||||
Sbjct: 54 caccaccgccgtcgcggcgc 73
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>dbj|AK070051.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040A06,
          full insert sequence
          Length = 1646

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 72 caccaccgccgtcgcggcgc 91
          ||||||||||||||||||||
Sbjct: 54 caccaccgccgtcgcggcgc 73
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>gb|DQ184948.1| Malus x domestica putative receptor kinase (DIPM1) mRNA, complete
          cds
          Length = 2440

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                      
Query: 57 cctcctcctgctcctcaccaccgccgtc 84
          ||||||||| |||||| |||||||||||
Sbjct: 58 cctcctcctcctcctcgccaccgccgtc 85
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>dbj|AK060987.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C01,
          full insert sequence
          Length = 1068

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 72 caccaccgccgtcgcggcgc 91
          ||||||||||||||||||||
Sbjct: 63 caccaccgccgtcgcggcgc 82
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>gb|AC159020.2| Pan troglodytes BAC clone CH251-530A5 from chromosome unknown, complete
              sequence
          Length = 219428

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 56     ccctcctcctgctcctcacc 75
              ||||||||||||||||||||
Sbjct: 108832 ccctcctcctgctcctcacc 108851


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,736,825
Number of Sequences: 3902068
Number of extensions: 2736825
Number of successful extensions: 81492
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 80890
Number of HSP's gapped (non-prelim): 602
length of query: 434
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 412
effective length of database: 17,147,199,772
effective search space: 7064646306064
effective search space used: 7064646306064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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