| Clone Name | bast75e05 |
|---|---|
| Clone Library Name | barley_pub |
>FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan protein 1 precursor| Length = 424 Score = 87.8 bits (216), Expect(2) = 7e-19 Identities = 40/81 (49%), Positives = 54/81 (66%) Frame = +2 Query: 155 NITAAMAKGGCKAFAALVAASPDAHSTFQSAGDGGVTAFCPSDDAVRSFMPRYKNLTADG 334 N+T M+ GCK FA + +P A T+Q + +GG+T FCP DDA++ F+P+YKNLTA Sbjct: 186 NLTGIMSAHGCKVFAETLLTNPGASKTYQESLEGGMTVFCPGDDAMKGFLPKYKNLTAPK 245 Query: 335 KASLLLFHAVPVYYAPRSLKS 397 K + L F AVP YY+ LKS Sbjct: 246 KEAFLDFLAVPTYYSMAMLKS 266 Score = 24.3 bits (51), Expect(2) = 7e-19 Identities = 10/11 (90%), Positives = 10/11 (90%) Frame = +1 Query: 397 NNGVMNTLATD 429 NNG MNTLATD Sbjct: 267 NNGPMNTLATD 277
>FLA10_ARATH (Q9LZX4) Fasciclin-like arabinogalactan protein 10 precursor| Length = 422 Score = 55.8 bits (133), Expect = 4e-08 Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 1/82 (1%) Frame = +2 Query: 155 NITAAMAKGGCKAFAALVAASPDAHSTFQSAGDGGVTAFCPSDDAVRS-FMPRYKNLTAD 331 NIT + K GCK FA L+ +S TF+S + G+T F PSD+A ++ +P NLT Sbjct: 190 NITGLLEKAGCKTFANLLVSS-GVIKTFESTVEKGLTVFAPSDEAFKARGVPDLTNLTQA 248 Query: 332 GKASLLLFHAVPVYYAPRSLKS 397 SLL +HA+ Y SLK+ Sbjct: 249 EVVSLLEYHALAEYKPKGSLKT 270
>FLA8_ARATH (O22126) Fasciclin-like arabinogalactan protein 8 precursor| (AtAGP8) Length = 420 Score = 53.9 bits (128), Expect = 2e-07 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 1/82 (1%) Frame = +2 Query: 155 NITAAMAKGGCKAFAALVAASPDAHSTFQSAGDGGVTAFCPSDDAVRS-FMPRYKNLTAD 331 NIT + K GCK FA L+ +S T++SA + G+T F PSD+A ++ +P LT Sbjct: 189 NITGLLEKAGCKTFANLLVSS-GVLKTYESAVEKGLTVFAPSDEAFKAEGVPDLTKLTQA 247 Query: 332 GKASLLLFHAVPVYYAPRSLKS 397 SLL +HA+ Y SLK+ Sbjct: 248 EVVSLLEYHALAEYKPKGSLKT 269
>FLA7_ARATH (Q9SJ81) Fasciclin-like arabinogalactan protein 7 precursor| Length = 254 Score = 43.5 bits (101), Expect = 2e-04 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 4/63 (6%) Frame = +2 Query: 233 TFQSAGDG---GVTAFCPSDDAVRSFM-PRYKNLTADGKASLLLFHAVPVYYAPRSLKST 400 TFQ+ + G+T F P DDA ++ P NLT D L+LFHA+P YY+ K+ Sbjct: 72 TFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNLTKDQLKQLVLFHALPHYYSLSEFKNL 131 Query: 401 TAS 409 + S Sbjct: 132 SQS 134
>BGH3_HUMAN (Q15582) Transforming growth factor-beta-induced protein ig-h3| precursor (Beta ig-h3) (Kerato-epithelin) (RGD-containing collagen-associated protein) (RGD-CAP) Length = 683 Score = 32.0 bits (71), Expect = 0.64 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 3/62 (4%) Frame = +2 Query: 182 GCKAFAALVAASPDAHSTFQSAGDGGVTAFCPSDDAVRSFMPRYKN-LTADGK--ASLLL 352 G F+ LVAA A T +G T F P+++A R+ PR ++ L D K A++L Sbjct: 511 GDNRFSMLVAAIQSAGLTETLNREGVYTVFAPTNEAFRALPPRERSRLLGDAKELANILK 570 Query: 353 FH 358 +H Sbjct: 571 YH 572
>YH35_SYNP2 (O33752) Hypothetical protein sll1735 homolog| Length = 133 Score = 30.4 bits (67), Expect = 1.9 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = +2 Query: 188 KAFAALVAASPDAHSTFQSAGDGGVTAFCPSDDAVRSFMP 307 + F+ LVAA A AG+G T F P+DDA P Sbjct: 12 EGFSTLVAAVQAAGLVETLAGEGDFTVFAPNDDAFAKLPP 51 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,151,721 Number of Sequences: 219361 Number of extensions: 522018 Number of successful extensions: 1853 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 1818 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1846 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2395157885 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)