ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast75d12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT017381.1| Zea mays clone EL01N0326E03.c mRNA sequence Length = 1367 Score = 50.1 bits (25), Expect = 0.004 Identities = 25/25 (100%) Strand = Plus / Plus Query: 44 catccatccatggccgccgccgccc 68 ||||||||||||||||||||||||| Sbjct: 44 catccatccatggccgccgccgccc 68
>gb|AF306688.1| Homo sapiens clone O19r mRNA sequence Length = 3561 Score = 46.1 bits (23), Expect = 0.058 Identities = 26/27 (96%) Strand = Plus / Minus Query: 56 gccgccgccgccccggcccgcaggctc 82 |||||||||||||||||||| |||||| Sbjct: 278 gccgccgccgccccggcccggaggctc 252
>ref|XM_939890.1| PREDICTED: Homo sapiens similar to kelch-like 12, transcript variant 1 (LOC648418), mRNA Length = 3643 Score = 46.1 bits (23), Expect = 0.058 Identities = 26/27 (96%) Strand = Plus / Minus Query: 56 gccgccgccgccccggcccgcaggctc 82 |||||||||||||||||||| |||||| Sbjct: 374 gccgccgccgccccggcccggaggctc 348
>ref|XM_927859.1| PREDICTED: Homo sapiens similar to kelch-like 12, transcript variant 1 (LOC643102), mRNA Length = 3643 Score = 46.1 bits (23), Expect = 0.058 Identities = 26/27 (96%) Strand = Plus / Minus Query: 56 gccgccgccgccccggcccgcaggctc 82 |||||||||||||||||||| |||||| Sbjct: 374 gccgccgccgccccggcccggaggctc 348
>gb|AC005500.2| Homo sapiens 22q11 PAC Clone Clone p52f6 In DGCR Region, complete sequence Length = 192592 Score = 46.1 bits (23), Expect = 0.058 Identities = 26/27 (96%) Strand = Plus / Minus Query: 56 gccgccgccgccccggcccgcaggctc 82 |||||||||||||||||||| |||||| Sbjct: 101383 gccgccgccgccccggcccggaggctc 101357
>gb|AC007731.16| Homo sapiens chromosome 22 clone b562f10 map 22q11, complete sequence Length = 182617 Score = 46.1 bits (23), Expect = 0.058 Identities = 26/27 (96%) Strand = Plus / Minus Query: 56 gccgccgccgccccggcccgcaggctc 82 |||||||||||||||||||| |||||| Sbjct: 106437 gccgccgccgccccggcccggaggctc 106411
>gb|U20824.1|EHVU20824 Equine herpesvirus 2, complete genome Length = 184427 Score = 46.1 bits (23), Expect = 0.058 Identities = 23/23 (100%) Strand = Plus / Plus Query: 53 atggccgccgccgccccggcccg 75 ||||||||||||||||||||||| Sbjct: 143028 atggccgccgccgccccggcccg 143050
>ref|XM_531834.2| PREDICTED: Canis familiaris similar to EGF-containing fibulin-like extracellular matrix protein 1 isoform a precursor (LOC474604), mRNA Length = 2157 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Plus Query: 57 ccgccgccgccccggcccgcag 78 |||||||||||||||||||||| Sbjct: 26 ccgccgccgccccggcccgcag 47
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Minus Query: 43 ccatccatccatggccgccgcc 64 |||||||||||||||||||||| Sbjct: 18435698 ccatccatccatggccgccgcc 18435677
>dbj|AP004222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1003B09 Length = 155263 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Minus Query: 43 ccatccatccatggccgccgcc 64 |||||||||||||||||||||| Sbjct: 59456 ccatccatccatggccgccgcc 59435
>dbj|AP003563.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1168H06 Length = 185600 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Minus Query: 43 ccatccatccatggccgccgcc 64 |||||||||||||||||||||| Sbjct: 34915 ccatccatccatggccgccgcc 34894
>dbj|AK071677.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107G19, full insert sequence Length = 1271 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Plus Query: 43 ccatccatccatggccgccgcc 64 |||||||||||||||||||||| Sbjct: 21 ccatccatccatggccgccgcc 42
>gb|AC163295.2| Mus musculus BAC clone RP23-132K20 from chromosome 14, complete sequence Length = 212576 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 gccgccgccgccccggcccgc 76 ||||||||||||||||||||| Sbjct: 142657 gccgccgccgccccggcccgc 142677
>ref|XM_464762.1| Oryza sativa (japonica cultivar-group), mRNA Length = 783 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 43 ccatccatccatggccgccgc 63 ||||||||||||||||||||| Sbjct: 648 ccatccatccatggccgccgc 628
>ref|NM_022434.1| Mus musculus cytochrome P450, family 4, subfamily f, polypeptide 14 (Cyp4f14), mRNA Length = 2216 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 1744 ctccacccgcagccacagccc 1724
>gb|BC003954.1| Mus musculus cytochrome P450, family 4, subfamily f, polypeptide 13, mRNA (cDNA clone MGC:7384 IMAGE:3487830), complete cds Length = 1722 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 1607 ctccacccgcagccacagccc 1587
>ref|NM_130882.1| Mus musculus cytochrome P450, family 4, subfamily f, polypeptide 13 (Cyp4f13), mRNA Length = 1731 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 1598 ctccacccgcagccacagccc 1578
>ref|XM_992966.1| PREDICTED: Mus musculus similar to Cytochrome P450 4F4 (CYPIVF4) (LOC631304), mRNA Length = 1575 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 1551 ctccacccgcagccacagccc 1531
>ref|XM_992890.1| PREDICTED: Mus musculus similar to Cytochrome P450 4F6 (CYPIVF6) (LOC208285), mRNA Length = 1687 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 1663 ctccacccgcagccacagccc 1643
>ref|XM_905071.2| PREDICTED: Mus musculus similar to Cytochrome P450 4F4 (CYPIVF4) (LOC631304), mRNA Length = 1575 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 1551 ctccacccgcagccacagccc 1531
>ref|XM_904956.2| PREDICTED: Mus musculus similar to Cytochrome P450 4F6 (CYPIVF6) (LOC208285), mRNA Length = 1687 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 1663 ctccacccgcagccacagccc 1643
>ref|XM_988992.1| PREDICTED: Mus musculus similar to Cytochrome P450 4F4 (CYPIVF4) (LOC631304), mRNA Length = 1575 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 1551 ctccacccgcagccacagccc 1531
>ref|XM_139863.6| PREDICTED: Mus musculus similar to Cytochrome P450 4F6 (CYPIVF6) (LOC208285), mRNA Length = 1687 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 1663 ctccacccgcagccacagccc 1643
>ref|XM_001003675.1| PREDICTED: Mus musculus hypothetical protein LOC668798 (LOC668798), mRNA Length = 1623 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 gccgccgccgccccggcccgc 76 ||||||||||||||||||||| Sbjct: 617 gccgccgccgccccggcccgc 637
>gb|BC058330.1| Mus musculus cytochrome P450, family 4, subfamily f, polypeptide 13, mRNA (cDNA clone IMAGE:6820599) Length = 1410 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 1290 ctccacccgcagccacagccc 1270
>gb|BC021377.1| Mus musculus cytochrome P450, family 4, subfamily f, polypeptide 15, mRNA (cDNA clone MGC:29243 IMAGE:5050617), complete cds Length = 2120 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 1696 ctccacccgcagccacagccc 1676
>ref|XM_846422.1| PREDICTED: Canis familiaris similar to doublesex and mab-3 related transcription factor 3 (LOC609208), mRNA Length = 1428 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 gccgccgccgccccggcccgc 76 ||||||||||||||||||||| Sbjct: 351 gccgccgccgccccggcccgc 371
>emb|BX640441.1| Bordetella bronchiseptica strain RB50, complete genome; segment 5/16 Length = 348624 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 ccatggccgccgccgccccgg 71 ||||||||||||||||||||| Sbjct: 52550 ccatggccgccgccgccccgg 52530
>emb|BX640426.1| Bordetella parapertussis strain 12822, complete genome; segment 4/14 Length = 348866 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 51 ccatggccgccgccgccccgg 71 ||||||||||||||||||||| Sbjct: 165831 ccatggccgccgccgccccgg 165811
>gb|BC094016.1| Mus musculus cytochrome P450, family 4, subfamily f, polypeptide 14, mRNA (cDNA clone MGC:102428 IMAGE:5055490), complete cds Length = 2147 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 1731 ctccacccgcagccacagccc 1711
>dbj|AK024373.1| Homo sapiens cDNA FLJ14311 fis, clone PLACE3000304 Length = 4457 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Plus Query: 198 tcccgggctccccggccccgg 218 ||||||||||||||||||||| Sbjct: 475 tcccgggctccccggccccgg 495
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Minus Query: 226 gctccgggacctcctcttcgccttc 250 |||||| |||||||||||||||||| Sbjct: 1053940 gctccgcgacctcctcttcgccttc 1053916
>dbj|AK018676.1| Mus musculus adult male cecum cDNA, RIKEN full-length enriched library, clone:9130414F11 product:cytochrome P450, subfamily IVF, polypeptide 14 (leukotriene B4 omega hydroxylase), full insert sequence Length = 2035 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 1583 ctccacccgcagccacagccc 1563
>dbj|AK005007.1| Mus musculus adult male liver cDNA, RIKEN full-length enriched library, clone:1300014O15 product:cytochrome P450, subfamily IVF, polypeptide 14 (leukotriene B4 omega hydroxylase), full insert sequence Length = 1986 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 1585 ctccacccgcagccacagccc 1565
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 catccatccatggccgccgcc 64 ||||||||||||||||||||| Sbjct: 29250804 catccatccatggccgccgcc 29250784 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 atccatccatggccgccgcc 64 |||||||||||||||||||| Sbjct: 14359107 atccatccatggccgccgcc 14359088
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 ccatccatccatggccgccgc 63 ||||||||||||||||||||| Sbjct: 7203225 ccatccatccatggccgccgc 7203245 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 catccatccatggccgccgccgcc 67 |||||||||||||| ||||||||| Sbjct: 11868120 catccatccatggcggccgccgcc 11868143
>gb|AF233645.1|AF233645 Mus musculus cytochrome P450 CYP4F15 mRNA, complete cds Length = 2157 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 1726 ctccacccgcagccacagccc 1706
>gb|AF233644.1|AF233644 Mus musculus cytochrome P450 CYP4F14 mRNA, complete cds Length = 2181 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 1734 ctccacccgcagccacagccc 1714
>gb|AF233643.1|AF233643 Mus musculus cytochrome P450 CYP4F13 mRNA, complete cds Length = 1731 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 1598 ctccacccgcagccacagccc 1578
>ref|XM_578642.1| PREDICTED: Rattus norvegicus similar to Cyp4f15 protein (LOC503122), mRNA Length = 2772 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 2751 ctccacccgcagccacagccc 2731
>ref|XM_580122.1| PREDICTED: Rattus norvegicus LOC500803 (LOC500803), mRNA Length = 1029 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 776 ctccacccgcagccacagccc 756
>ref|XM_576190.1| PREDICTED: Rattus norvegicus similar to Cytochrome P450 4F6 (CYPIVF6) (LOC500801), mRNA Length = 2343 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 2319 ctccacccgcagccacagccc 2299
>ref|NM_134127.1| Mus musculus cytochrome P450, family 4, subfamily f, polypeptide 15 (Cyp4f15), mRNA Length = 2157 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 1726 ctccacccgcagccacagccc 1706
>gb|AC018634.3|AC018634 Human Chromosome 7 clone RP11-243E12, complete sequence Length = 174241 Score = 42.1 bits (21), Expect = 0.90 Identities = 24/25 (96%) Strand = Plus / Minus Query: 172 gcagccacagcccccggcgcctcct 196 |||||||||||||| |||||||||| Sbjct: 77193 gcagccacagccccgggcgcctcct 77169
>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0018H04 Length = 142053 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 44 catccatccatggccgccgcc 64 ||||||||||||||||||||| Sbjct: 13602 catccatccatggccgccgcc 13582
>dbj|AP005394.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0620H05 Length = 161808 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Plus Query: 43 ccatccatccatggccgccgc 63 ||||||||||||||||||||| Sbjct: 103162 ccatccatccatggccgccgc 103182
>dbj|AK120907.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031L08, full insert sequence Length = 2197 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 catccatccatggccgccgcc 64 ||||||||||||||||||||| Sbjct: 42 catccatccatggccgccgcc 62
>emb|CT485616.11| Mouse DNA sequence from clone RP23-14H16 on chromosome 17, complete sequence Length = 163243 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 151142 ctccacccgcagccacagccc 151122
>emb|CT033786.13| Mouse DNA sequence from clone RP24-298F18 on chromosome 14, complete sequence Length = 185421 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Plus Query: 56 gccgccgccgccccggcccgc 76 ||||||||||||||||||||| Sbjct: 46718 gccgccgccgccccggcccgc 46738
>gb|BC101918.1| Rattus norvegicus cytochrome P450, family 4, subfamily f, polypeptide 18, mRNA (cDNA clone MGC:124833 IMAGE:7935301), complete cds Length = 2811 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 1577 ctccacccgcagccacagccc 1557
>emb|CT485613.9| Mouse DNA sequence from clone RP23-140I12 on chromosome 17, complete sequence Length = 161949 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 3712 ctccacccgcagccacagccc 3692
>emb|CT033772.6| Mouse DNA sequence from clone RP23-144A16 on chromosome 17, complete sequence Length = 214867 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 168522 ctccacccgcagccacagccc 168502 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 149246 ctccacccgcagccacagccc 149226
>gb|AC005328.1|AC005328 Homo sapiens chromosome 19, cosmid R26660, complete sequence Length = 35414 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 tcccgggctccccggccccgg 218 ||||||||||||||||||||| Sbjct: 15126 tcccgggctccccggccccgg 15106
>ref|NM_001033686.1| Rattus norvegicus cytochrome P450, family 4, subfamily f, polypeptide 18 (Cyp4f18), mRNA Length = 2811 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 1577 ctccacccgcagccacagccc 1557
>gb|BC011228.1| Mus musculus cytochrome P450, family 4, subfamily f, polypeptide 14, mRNA (cDNA clone MGC:18804 IMAGE:4195156), complete cds Length = 2194 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 1765 ctccacccgcagccacagccc 1745
>dbj|AB037541.1| Mus musculus CYP4F14 mRNA for leukotriene B4 omega-hydroxylase, complete cds Length = 2053 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 1581 ctccacccgcagccacagccc 1561
>dbj|AB037540.1| Mus musculus CYP4F14 mRNA for leukotriene B4 omega-hydroxylase, complete cds Length = 2216 Score = 42.1 bits (21), Expect = 0.90 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagccc 184 ||||||||||||||||||||| Sbjct: 1744 ctccacccgcagccacagccc 1724
>gb|U83904.1|HVU83904 Hordeum vulgare lipoxygenase isoenzyme 1 (Lox:Hv1) gene, promoter region and partial cds Length = 5236 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ccatccatccatggccgccg 62 |||||||||||||||||||| Sbjct: 3787 ccatccatccatggccgccg 3768
>gb|AC145808.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057F07 map near 50283S, complete sequence Length = 139827 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 catggccgccgccgccccggcccg 75 |||||||||||||||||| ||||| Sbjct: 68701 catggccgccgccgcccccgcccg 68678
>ref|XM_424642.1| PREDICTED: Gallus gallus similar to Protocadherin beta 1 precursor (PCDH-beta1) (LOC427044), partial mRNA Length = 1152 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cctccacctccccgcggatc 40 |||||||||||||||||||| Sbjct: 409 cctccacctccccgcggatc 390
>ref|XM_428857.1| PREDICTED: Gallus gallus similar to Protocadherin beta 15 precursor (LOC431306), partial mRNA Length = 1452 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cctccacctccccgcggatc 40 |||||||||||||||||||| Sbjct: 394 cctccacctccccgcggatc 375
>ref|XM_424315.1| PREDICTED: Gallus gallus similar to Protocadherin beta 1 precursor (PCDH-beta1) (LOC426692), partial mRNA Length = 1455 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cctccacctccccgcggatc 40 |||||||||||||||||||| Sbjct: 712 cctccacctccccgcggatc 693
>ref|XM_424332.1| PREDICTED: Gallus gallus similar to Protocadherin beta 15 precursor (PCDH-beta15) (LOC426713), mRNA Length = 1848 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cctccacctccccgcggatc 40 |||||||||||||||||||| Sbjct: 784 cctccacctccccgcggatc 765
>ref|XM_423902.1| PREDICTED: Gallus gallus similar to Protocadherin beta 1 precursor (PCDH-beta1) (LOC426239), partial mRNA Length = 1344 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cctccacctccccgcggatc 40 |||||||||||||||||||| Sbjct: 550 cctccacctccccgcggatc 531
>ref|XM_423725.1| PREDICTED: Gallus gallus similar to Protocadherin beta 15 precursor (PCDH-beta15) (LOC426046), mRNA Length = 1687 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cctccacctccccgcggatc 40 |||||||||||||||||||| Sbjct: 622 cctccacctccccgcggatc 603
>ref|XM_363148.1| Magnaporthe grisea 70-15 hypothetical protein (MG08732.4) partial cds Length = 2616 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gccgccgccgccccggcccg 75 |||||||||||||||||||| Sbjct: 2400 gccgccgccgccccggcccg 2419
>ref|XM_427149.1| PREDICTED: Gallus gallus similar to Protocadherin beta 15 precursor (PCDH-beta15) (LOC429594), partial mRNA Length = 764 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cctccacctccccgcggatc 40 |||||||||||||||||||| Sbjct: 125 cctccacctccccgcggatc 106
>ref|XM_423165.1| PREDICTED: Gallus gallus similar to Protocadherin beta 15 precursor (LOC425401), mRNA Length = 2341 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cctccacctccccgcggatc 40 |||||||||||||||||||| Sbjct: 524 cctccacctccccgcggatc 505
>ref|XM_427107.1| PREDICTED: Gallus gallus similar to Protocadherin beta 1 precursor (PCDH-beta1) (LOC429549), partial mRNA Length = 1246 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cctccacctccccgcggatc 40 |||||||||||||||||||| Sbjct: 394 cctccacctccccgcggatc 375
>ref|XM_423014.1| PREDICTED: Gallus gallus similar to Protocadherin beta 15 precursor (PCDH-beta15) (LOC425230), partial mRNA Length = 2013 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 21 cctccacctccccgcggatc 40 |||||||||||||||||||| Sbjct: 559 cctccacctccccgcggatc 540
>ref|XM_422044.1| PREDICTED: Gallus gallus similar to chondroitin polymerizing factor; chondroitin sulfate synthase 2 (LOC424198), mRNA Length = 8208 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 72 cccgcaggctcctcctgcgcctgc 95 ||||||| |||||||||||||||| Sbjct: 6629 cccgcagcctcctcctgcgcctgc 6652
>ref|NM_026033.1| Mus musculus GATA zinc finger domain containing 1 (Gatad1), mRNA Length = 2519 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gccgccgccgccccggcccg 75 |||||||||||||||||||| Sbjct: 418 gccgccgccgccccggcccg 399
>ref|NM_033267.2| Homo sapiens iroquois homeobox protein 2 (IRX2), mRNA Length = 2456 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 ccgccgccgccccggcccgc 76 |||||||||||||||||||| Sbjct: 75 ccgccgccgccccggcccgc 94
>gb|AC090443.4| Mus musculus strain C57BL6/J chromosome 5 clone RP23-434H17, complete sequence Length = 161421 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gccgccgccgccccggcccg 75 |||||||||||||||||||| Sbjct: 12417 gccgccgccgccccggcccg 12398
>gb|AY453841.1| Oryctolagus cuniculus atherin mRNA, complete cds Length = 2560 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gccgccgccgccccggcccg 75 |||||||||||||||||||| Sbjct: 666 gccgccgccgccccggcccg 685
>gb|AY453840.1| Homo sapiens atherin mRNA, complete cds Length = 1617 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gccgccgccgccccggcccg 75 |||||||||||||||||||| Sbjct: 421 gccgccgccgccccggcccg 440
>emb|AJ416711.2|CSA416711 Crocus sativus mRNA for beta-carotene hydroxylase (bch1cs gene) Length = 918 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 catccatggccgccgccgcc 67 |||||||||||||||||||| Sbjct: 326 catccatggccgccgccgcc 345
>gb|AC106820.4| Homo sapiens chromosome 16 clone RP11-715J22, complete sequence Length = 176552 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 55 ggccgccgccgccccggcccgcaggctc 82 |||||||||||||||||| | ||||||| Sbjct: 163366 ggccgccgccgccccggcgcccaggctc 163393
>ref|XM_546176.2| PREDICTED: Canis familiaris similar to zinc finger protein 503 (LOC489058), mRNA Length = 2339 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 54 tggccgccgccgccccggcc 73 |||||||||||||||||||| Sbjct: 1678 tggccgccgccgccccggcc 1659
>emb|AL513343.22| Human DNA sequence from clone RP11-90O23 on chromosome 1 Contains the 5' end of the ATP2B4 gene for ATPase Ca++ transporting plasma membrane 4 and a TGF beta-inducible nuclear protein 1 (TINP1) pseudogene, complete sequence Length = 147676 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tctcccatccatccatggcc 58 |||||||||||||||||||| Sbjct: 58635 tctcccatccatccatggcc 58654
>gb|AY335939.1| Homo sapiens homeodomain protein IRXA2 (IRX2) gene, complete cds Length = 8189 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 ccgccgccgccccggcccgc 76 |||||||||||||||||||| Sbjct: 1305 ccgccgccgccccggcccgc 1324
>gb|BC032063.1| Homo sapiens, clone IMAGE:5166280, mRNA Length = 1594 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 55 ggccgccgccgccccggcccgcaggctc 82 |||||||||||||||||| | ||||||| Sbjct: 1449 ggccgccgccgccccggcgcccaggctc 1422
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gccgccgccgccccggcccg 75 |||||||||||||||||||| Sbjct: 1950135 gccgccgccgccccggcccg 1950154
>gb|AC114956.2| Homo sapiens chromosome 5 clone RP11-159F24, complete sequence Length = 104726 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 cctcctcttcgccttccacc 254 |||||||||||||||||||| Sbjct: 101498 cctcctcttcgccttccacc 101517
>gb|AC010435.6| Homo sapiens chromosome 5 clone CTD-2210P15, complete sequence Length = 149207 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 cctcctcttcgccttccacc 254 |||||||||||||||||||| Sbjct: 5014 cctcctcttcgccttccacc 5033
>gb|AC091891.3| Homo sapiens chromosome 5 clone RP11-129I19, complete sequence Length = 156683 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 ccgccgccgccccggcccgc 76 |||||||||||||||||||| Sbjct: 133580 ccgccgccgccccggcccgc 133561
>gb|AF299324.1|AF299324 Azorhizobium caulinodans pyruvate dehydrogenase alpha subunit (pdhA) and pyruvate dehydrogenase beta subunit (pdhB) genes, complete cds; and dihydrolipoamide S-acetyltransferase (pdhC) gene, partial cds Length = 3134 Score = 40.1 bits (20), Expect = 3.6 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 54 tggccgccgccgccccggc-ccgcaggc 80 ||||||||||||||||||| |||||||| Sbjct: 1879 tggccgccgccgccccggcgccgcaggc 1906
>gb|BC103413.1| Bos taurus interleukin 22 receptor, alpha 1, mRNA (cDNA clone MGC:127988 IMAGE:7956217), complete cds Length = 2871 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ccaagccgcctccacctccc 32 |||||||||||||||||||| Sbjct: 789 ccaagccgcctccacctccc 808
>ref|NM_181034.2| Bos taurus RPGR-interacting protein 1 (RPGRIP1), mRNA Length = 3762 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 ccgccgccgccccggcccgcaggc 80 ||||||||||| |||||||||||| Sbjct: 217 ccgccgccgcctcggcccgcaggc 194
>dbj|AK012921.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810047M21 product:ODAG PROTEIN homolog [Mus musculus], full insert sequence Length = 1558 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gccgccgccgccccggcccg 75 |||||||||||||||||||| Sbjct: 438 gccgccgccgccccggcccg 419
>gb|DQ073080.1| Homo sapiens ATP-binding cassette, sub-family A (ABC1), member 3 (ABCA3) gene, complete cds Length = 66987 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 55 ggccgccgccgccccggcccgcaggctc 82 |||||||||||||||||| | ||||||| Sbjct: 460 ggccgccgccgccccggcgcccaggctc 487
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 catggccgccgccgccccggcccg 75 |||||||||||||||||| ||||| Sbjct: 14177593 catggccgccgccgcccccgcccg 14177616
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ccatccatccatggccgccg 62 |||||||||||||||||||| Sbjct: 3154879 ccatccatccatggccgccg 3154860
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 ccgccgccgccccggcccgc 76 |||||||||||||||||||| Sbjct: 18193629 ccgccgccgccccggcccgc 18193610 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 catccatccatggccgccgccgcc 67 ||||||||||| |||||||||||| Sbjct: 10465415 catccatccatcgccgccgccgcc 10465438
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 catccatggccgccgccgcc 67 |||||||||||||||||||| Sbjct: 24791583 catccatggccgccgccgcc 24791602
>dbj|AB210463.1| Ciona intestinalis mRNA for frizzled receptor, complete cds, clone: cies002j17 Length = 2419 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 ccgcacctccacccgcagcc 177 |||||||||||||||||||| Sbjct: 671 ccgcacctccacccgcagcc 652
>dbj|AB210044.1| Homo sapiens mRNA for ABCA3 variant protein, partial cds, clone: pg00769 Length = 6450 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 55 ggccgccgccgccccggcccgcaggctc 82 |||||||||||||||||| | ||||||| Sbjct: 146 ggccgccgccgccccggcgcccaggctc 173
>gb|BC019449.1| Mus musculus GATA zinc finger domain containing 1, mRNA (cDNA clone MGC:28402 IMAGE:4024452), complete cds Length = 1223 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gccgccgccgccccggcccg 75 |||||||||||||||||||| Sbjct: 307 gccgccgccgccccggcccg 288
>gb|AC098805.2| Homo sapiens chromosome 16 clone RP11-657D15, complete sequence Length = 149061 Score = 40.1 bits (20), Expect = 3.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 55 ggccgccgccgccccggcccgcaggctc 82 |||||||||||||||||| | ||||||| Sbjct: 5596 ggccgccgccgccccggcgcccaggctc 5623
>gb|BC012288.1| Homo sapiens, clone IMAGE:2900205, mRNA Length = 2403 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 cctcctcttcgccttccacc 254 |||||||||||||||||||| Sbjct: 157 cctcctcttcgccttccacc 138
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 164 ctccacccgcagccacagcccccg 187 |||||||||||||| ||||||||| Sbjct: 6845492 ctccacccgcagccccagcccccg 6845469
>ref|NM_138352.1| Homo sapiens sterile alpha motif domain containing 1 (SAMD1), mRNA Length = 1617 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 56 gccgccgccgccccggcccg 75 |||||||||||||||||||| Sbjct: 421 gccgccgccgccccggcccg 440
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 cgccgcacctccacccgcagccac 179 |||||||||||||||||| ||||| Sbjct: 368675 cgccgcacctccacccgcggccac 368652
>gb|AF227258.1|AF227258 Bos taurus RPGR-interacting protein-1 (RPGRIP1) mRNA, complete cds Length = 3762 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 ccgccgccgccccggcccgcaggc 80 ||||||||||| |||||||||||| Sbjct: 217 ccgccgccgcctcggcccgcaggc 194
>gb|AF265669.1|AF265669 Bos taurus RPGR-interacting protein 1 isoform b (RPGRIP1) mRNA, complete cds, alternatively spliced Length = 3020 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 ccgccgccgccccggcccgcaggc 80 ||||||||||| |||||||||||| Sbjct: 390 ccgccgccgcctcggcccgcaggc 367
>dbj|AK174591.1| Ciona intestinalis cDNA, clone:cies002j17, full insert sequence Length = 2420 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 ccgcacctccacccgcagcc 177 |||||||||||||||||||| Sbjct: 672 ccgcacctccacccgcagcc 653
>dbj|AB188492.1| Homo sapiens IRX2 mRNA for iroquois homeobox protein 2, complete cds, clone: TH032G07 Length = 2456 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 ccgccgccgccccggcccgc 76 |||||||||||||||||||| Sbjct: 75 ccgccgccgccccggcccgc 94
>dbj|AP003574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0526E12 Length = 150872 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 atccatccatggccgccgcc 64 |||||||||||||||||||| Sbjct: 86982 atccatccatggccgccgcc 86963
>dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0493C06 Length = 158923 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 catccatggccgccgccgcc 67 |||||||||||||||||||| Sbjct: 26034 catccatggccgccgccgcc 26053
>dbj|AP005009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0572A04 Length = 132018 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 catccatccatggccgccgccgcc 67 |||||||||||||| ||||||||| Sbjct: 65893 catccatccatggcggccgccgcc 65916
>dbj|AP005892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0011D16 Length = 177329 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ccatccatccatggccgccg 62 |||||||||||||||||||| Sbjct: 31192 ccatccatccatggccgccg 31173
>dbj|AP005727.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0038I09 Length = 153520 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ccatccatccatggccgccg 62 |||||||||||||||||||| Sbjct: 64542 ccatccatccatggccgccg 64523
>dbj|AP005731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091D16 Length = 174222 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 catccatccatggccgccgccgcc 67 ||||||||||| |||||||||||| Sbjct: 166373 catccatccatcgccgccgccgcc 166396
>dbj|AP005163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0053M06 Length = 175416 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 44 catccatccatggccgccgccgcc 67 ||||||||||| |||||||||||| Sbjct: 88006 catccatccatcgccgccgccgcc 88029
>dbj|AP004689.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0434E03 Length = 142414 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 ccgccgccgccccggcccgc 76 |||||||||||||||||||| Sbjct: 15941 ccgccgccgccccggcccgc 15922
>dbj|AK105239.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-B04, full insert sequence Length = 1369 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 catccatggccgccgccgcc 67 |||||||||||||||||||| Sbjct: 56 catccatggccgccgccgcc 75
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 ccatggccgccgccgccccggccc 74 ||||||||||| |||||||||||| Sbjct: 2970285 ccatggccgccaccgccccggccc 2970308
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 catggccgccgccgccccggcccg 75 |||||||||||||||||| ||||| Sbjct: 14259595 catggccgccgccgcccccgcccg 14259618
>gb|BC065189.1| Homo sapiens iroquois homeobox protein 2, mRNA (cDNA clone MGC:71253 IMAGE:6422941), complete cds Length = 1729 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 ccgccgccgccccggcccgc 76 |||||||||||||||||||| Sbjct: 79 ccgccgccgccccggcccgc 98
>ref|NM_001034311.1| Bos taurus interleukin 22 receptor, alpha 1 (IL22RA1), mRNA Length = 2871 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 13 ccaagccgcctccacctccc 32 |||||||||||||||||||| Sbjct: 789 ccaagccgcctccacctccc 808
>dbj|AP005795.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1090H08 Length = 200720 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 57 ccgccgccgccccggcccgc 76 |||||||||||||||||||| Sbjct: 197425 ccgccgccgccccggcccgc 197406
>gb|M84165.1|MZECHITB Zea mays chitinase B (seed chitinase) gene, 3'end Length = 810 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gccgccgccgccccggcccg 75 |||||||||||||||||||| Sbjct: 183 gccgccgccgccccggcccg 164
>dbj|AB047921.1| Mus musculus mRNA for ODAG protein, complete cds Length = 2519 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 gccgccgccgccccggcccg 75 |||||||||||||||||||| Sbjct: 418 gccgccgccgccccggcccg 399 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,499,292 Number of Sequences: 3902068 Number of extensions: 2499292 Number of successful extensions: 67377 Number of sequences better than 10.0: 123 Number of HSP's better than 10.0 without gapping: 125 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 65821 Number of HSP's gapped (non-prelim): 1557 length of query: 273 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 251 effective length of database: 17,147,199,772 effective search space: 4303947142772 effective search space used: 4303947142772 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
