ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast75d05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_473575.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2331 Score = 484 bits (244), Expect = e-133 Identities = 431/492 (87%), Gaps = 1/492 (0%) Strand = Plus / Plus Query: 1 agcgaccgccgccgcgtcgggttcaacatcctgtcggggacgtccatgtcgtgcccgcac 60 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1630 agcgacagccgtcgcgtcgggttcaacatcctgtcggggacgtccatgtcgtgcccgcac 1689 Query: 61 gtcgccggcgtggccgcgctgctcaaggcaagccacccggactggagccctgcgcagatc 120 ||||||||||||||||||||| ||||||| |||||||||||||||||||| || |||||| Sbjct: 1690 gtcgccggcgtggccgcgctgatcaaggcgagccacccggactggagcccagcacagatc 1749 Query: 121 aagtcggcgctcatgaccaccgcctacgtccacgacaacacctaccacgtgctgaaggac 180 ||||| ||||| ||||||||||| ||||| ||||||||||| |||| | |||||||| Sbjct: 1750 aagtccgcgctgatgaccaccgcgtacgtgcacgacaacacgtaccggccgatgaaggac 1809 Query: 181 gcggcgaccggcgaggcgtccacgccattcgagcacggcgccggccacatacacccggtg 240 |||||||||||| ||||||| ||||| ||||||||||| || || ||||||||||||||| Sbjct: 1810 gcggcgaccggcaaggcgtcgacgccgttcgagcacggagcggggcacatacacccggtg 1869 Query: 241 cgagcgctcagcccaggcctggtctacgacattgggcagaacgagtacctcgagttcctc 300 ||||| |||| ||| |||||||||||||||||||| ||| ||| ||||| ||||||||| Sbjct: 1870 cgagctctcacccctggcctggtctacgacattggccaggccgactacctggagttcctc 1929 Query: 301 tgcacgcagaacctgacgccgacgcagctcaagggcttcaccaagaactccaacatgaca 360 ||||||||| || ||||||||| |||||||| | ||||||||||||||||||||||||| Sbjct: 1930 tgcacgcagcacatgacgccgatgcagctcaggaccttcaccaagaactccaacatgaca 1989 Query: 361 tgcaagggcagcttcagctcgcccggcgacctcaactacccggcgatctccgccgtcttc 420 |||| | || |||||| || || ||||||||||||| ||||| ||||| | ||||||| Sbjct: 1990 tgcaggcacaccttcagttccgccagcgacctcaactatccggccatctcagtcgtcttc 2049 Query: 421 accgatcagccggccaccccgctgacggtgcgccgcaccgtgacgaacgtcgg-cctccg 479 |||| ||||| ||| ||||||||||||||||||| || |||||||| || ||||| Sbjct: 2050 gccgaccagccatccaaggcgctgacggtgcgccgcactgtcacgaacgttggtcctcca 2109 Query: 480 tcgtcgacgtac 491 || ||||||||| Sbjct: 2110 tcttcgacgtac 2121
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 484 bits (244), Expect = e-133 Identities = 431/492 (87%), Gaps = 1/492 (0%) Strand = Plus / Minus Query: 1 agcgaccgccgccgcgtcgggttcaacatcctgtcggggacgtccatgtcgtgcccgcac 60 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 28852953 agcgacagccgtcgcgtcgggttcaacatcctgtcggggacgtccatgtcgtgcccgcac 28852894 Query: 61 gtcgccggcgtggccgcgctgctcaaggcaagccacccggactggagccctgcgcagatc 120 ||||||||||||||||||||| ||||||| |||||||||||||||||||| || |||||| Sbjct: 28852893 gtcgccggcgtggccgcgctgatcaaggcgagccacccggactggagcccagcacagatc 28852834 Query: 121 aagtcggcgctcatgaccaccgcctacgtccacgacaacacctaccacgtgctgaaggac 180 ||||| ||||| ||||||||||| ||||| ||||||||||| |||| | |||||||| Sbjct: 28852833 aagtccgcgctgatgaccaccgcgtacgtgcacgacaacacgtaccggccgatgaaggac 28852774 Query: 181 gcggcgaccggcgaggcgtccacgccattcgagcacggcgccggccacatacacccggtg 240 |||||||||||| ||||||| ||||| ||||||||||| || || ||||||||||||||| Sbjct: 28852773 gcggcgaccggcaaggcgtcgacgccgttcgagcacggagcggggcacatacacccggtg 28852714 Query: 241 cgagcgctcagcccaggcctggtctacgacattgggcagaacgagtacctcgagttcctc 300 ||||| |||| ||| |||||||||||||||||||| ||| ||| ||||| ||||||||| Sbjct: 28852713 cgagctctcacccctggcctggtctacgacattggccaggccgactacctggagttcctc 28852654 Query: 301 tgcacgcagaacctgacgccgacgcagctcaagggcttcaccaagaactccaacatgaca 360 ||||||||| || ||||||||| |||||||| | ||||||||||||||||||||||||| Sbjct: 28852653 tgcacgcagcacatgacgccgatgcagctcaggaccttcaccaagaactccaacatgaca 28852594 Query: 361 tgcaagggcagcttcagctcgcccggcgacctcaactacccggcgatctccgccgtcttc 420 |||| | || |||||| || || ||||||||||||| ||||| ||||| | ||||||| Sbjct: 28852593 tgcaggcacaccttcagttccgccagcgacctcaactatccggccatctcagtcgtcttc 28852534 Query: 421 accgatcagccggccaccccgctgacggtgcgccgcaccgtgacgaacgtcgg-cctccg 479 |||| ||||| ||| ||||||||||||||||||| || |||||||| || ||||| Sbjct: 28852533 gccgaccagccatccaaggcgctgacggtgcgccgcactgtcacgaacgttggtcctcca 28852474 Query: 480 tcgtcgacgtac 491 || ||||||||| Sbjct: 28852473 tcttcgacgtac 28852462 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 40 acgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctgctc 84 ||||||||| ||| |||||||||||||||||||| ||||||||| Sbjct: 21368942 acgtccatggcgtcgccgcacgtcgccggcgtggcggcgctgctc 21368986 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 gatcaagtcggcgctcatgaccaccgcc 144 |||||||||||| |||||||||||||| Sbjct: 27975488 gatcaagtcggccatcatgaccaccgcc 27975461 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 123 gtcggcgctcatgaccaccgcctacgtc 150 ||||||| |||||||||||||| ||||| Sbjct: 27198786 gtcggcgatcatgaccaccgccgacgtc 27198813
>dbj|AK110251.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-162-H04, full insert sequence Length = 3493 Score = 484 bits (244), Expect = e-133 Identities = 431/492 (87%), Gaps = 1/492 (0%) Strand = Plus / Minus Query: 1 agcgaccgccgccgcgtcgggttcaacatcctgtcggggacgtccatgtcgtgcccgcac 60 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1596 agcgacagccgtcgcgtcgggttcaacatcctgtcggggacgtccatgtcgtgcccgcac 1537 Query: 61 gtcgccggcgtggccgcgctgctcaaggcaagccacccggactggagccctgcgcagatc 120 ||||||||||||||||||||| ||||||| |||||||||||||||||||| || |||||| Sbjct: 1536 gtcgccggcgtggccgcgctgatcaaggcgagccacccggactggagcccagcacagatc 1477 Query: 121 aagtcggcgctcatgaccaccgcctacgtccacgacaacacctaccacgtgctgaaggac 180 ||||| ||||| ||||||||||| ||||| ||||||||||| |||| | |||||||| Sbjct: 1476 aagtccgcgctgatgaccaccgcgtacgtgcacgacaacacgtaccggccgatgaaggac 1417 Query: 181 gcggcgaccggcgaggcgtccacgccattcgagcacggcgccggccacatacacccggtg 240 |||||||||||| ||||||| ||||| ||||||||||| || || ||||||||||||||| Sbjct: 1416 gcggcgaccggcaaggcgtcgacgccgttcgagcacggagcggggcacatacacccggtg 1357 Query: 241 cgagcgctcagcccaggcctggtctacgacattgggcagaacgagtacctcgagttcctc 300 ||||| |||| ||| |||||||||||||||||||| ||| ||| ||||| ||||||||| Sbjct: 1356 cgagctctcacccctggcctggtctacgacattggccaggccgactacctggagttcctc 1297 Query: 301 tgcacgcagaacctgacgccgacgcagctcaagggcttcaccaagaactccaacatgaca 360 ||||||||| || ||||||||| |||||||| | ||||||||||||||||||||||||| Sbjct: 1296 tgcacgcagcacatgacgccgatgcagctcaggaccttcaccaagaactccaacatgaca 1237 Query: 361 tgcaagggcagcttcagctcgcccggcgacctcaactacccggcgatctccgccgtcttc 420 |||| | || |||||| || || ||||||||||||| ||||| ||||| | ||||||| Sbjct: 1236 tgcaggcacaccttcagttccgccagcgacctcaactatccggccatctcagtcgtcttc 1177 Query: 421 accgatcagccggccaccccgctgacggtgcgccgcaccgtgacgaacgtcgg-cctccg 479 |||| ||||| ||| ||||||||||||||||||| || |||||||| || ||||| Sbjct: 1176 gccgaccagccatccaaggcgctgacggtgcgccgcactgtcacgaacgttggtcctcca 1117 Query: 480 tcgtcgacgtac 491 || ||||||||| Sbjct: 1116 tcttcgacgtac 1105
>dbj|AK110034.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-160-B01, full insert sequence Length = 3486 Score = 484 bits (244), Expect = e-133 Identities = 431/492 (87%), Gaps = 1/492 (0%) Strand = Plus / Minus Query: 1 agcgaccgccgccgcgtcgggttcaacatcctgtcggggacgtccatgtcgtgcccgcac 60 |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 853 agcgacagccgccgcctcgggttcaacatcctgtcggggacgtccatgtcgtgcccgcac 794 Query: 61 gtcgccggcgtggccgcgctgctcaaggcaagccacccggactggagccctgcgcagatc 120 ||||||||||||||||||||| ||||||| |||||||||||||||||||| || |||||| Sbjct: 793 gtcgccggcgtggccgcgctgatcaaggcgagccacccggactggagcccagcacagatc 734 Query: 121 aagtcggcgctcatgaccaccgcctacgtccacgacaacacctaccacgtgctgaaggac 180 ||||| ||||| ||||||||||| ||||| ||||||||||| |||| | |||||||| Sbjct: 733 aagtccgcgctgatgaccaccgcgtacgtgcacgacaacacgtaccggccgatgaaggac 674 Query: 181 gcggcgaccggcgaggcgtccacgccattcgagcacggcgccggccacatacacccggtg 240 |||||||||||| ||||||| ||||| ||||||||||| || || ||||||||||||||| Sbjct: 673 gcggcgaccggcaaggcgtcgacgccgttcgagcacggagcggggcacatacacccggtg 614 Query: 241 cgagcgctcagcccaggcctggtctacgacattgggcagaacgagtacctcgagttcctc 300 ||||| |||| ||| |||||||||||||||||||| ||| ||| ||||| ||||||||| Sbjct: 613 cgagctctcacccctggcctggtctacgacattggccaggccgactacctggagttcctc 554 Query: 301 tgcacgcagaacctgacgccgacgcagctcaagggcttcaccaagaactccaacatgaca 360 ||||||||| || ||||||||| |||||||| | ||||||||||||||||||||||||| Sbjct: 553 tgcacgcagcacatgacgccgatgcagctcaggaccttcaccaagaactccaacatgaca 494 Query: 361 tgcaagggcagcttcagctcgcccggcgacctcaactacccggcgatctccgccgtcttc 420 |||| | || |||||| || || ||||||||||||| ||||| ||||| | ||||||| Sbjct: 493 tgcaggcacaccttcagttccgccagcgacctcaactatccggccatctcagtcgtcttc 434 Query: 421 accgatcagccggccaccccgctgacggtgcgccgcaccgtgacgaacgtcgg-cctccg 479 |||| ||||| ||| ||||||||||||||||||| || |||||||| || ||||| Sbjct: 433 gccgaccagccatccaaggcgctgacggtgcgccgcactgtcacgaacgttggtcctcca 374 Query: 480 tcgtcgacgtac 491 || ||||||||| Sbjct: 373 tcttcgacgtac 362
>emb|AL606640.4|OSJN00071 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019K04, complete sequence Length = 154865 Score = 484 bits (244), Expect = e-133 Identities = 431/492 (87%), Gaps = 1/492 (0%) Strand = Plus / Minus Query: 1 agcgaccgccgccgcgtcgggttcaacatcctgtcggggacgtccatgtcgtgcccgcac 60 |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 65015 agcgacagccgtcgcgtcgggttcaacatcctgtcggggacgtccatgtcgtgcccgcac 64956 Query: 61 gtcgccggcgtggccgcgctgctcaaggcaagccacccggactggagccctgcgcagatc 120 ||||||||||||||||||||| ||||||| |||||||||||||||||||| || |||||| Sbjct: 64955 gtcgccggcgtggccgcgctgatcaaggcgagccacccggactggagcccagcacagatc 64896 Query: 121 aagtcggcgctcatgaccaccgcctacgtccacgacaacacctaccacgtgctgaaggac 180 ||||| ||||| ||||||||||| ||||| ||||||||||| |||| | |||||||| Sbjct: 64895 aagtccgcgctgatgaccaccgcgtacgtgcacgacaacacgtaccggccgatgaaggac 64836 Query: 181 gcggcgaccggcgaggcgtccacgccattcgagcacggcgccggccacatacacccggtg 240 |||||||||||| ||||||| ||||| ||||||||||| || || ||||||||||||||| Sbjct: 64835 gcggcgaccggcaaggcgtcgacgccgttcgagcacggagcggggcacatacacccggtg 64776 Query: 241 cgagcgctcagcccaggcctggtctacgacattgggcagaacgagtacctcgagttcctc 300 ||||| |||| ||| |||||||||||||||||||| ||| ||| ||||| ||||||||| Sbjct: 64775 cgagctctcacccctggcctggtctacgacattggccaggccgactacctggagttcctc 64716 Query: 301 tgcacgcagaacctgacgccgacgcagctcaagggcttcaccaagaactccaacatgaca 360 ||||||||| || ||||||||| |||||||| | ||||||||||||||||||||||||| Sbjct: 64715 tgcacgcagcacatgacgccgatgcagctcaggaccttcaccaagaactccaacatgaca 64656 Query: 361 tgcaagggcagcttcagctcgcccggcgacctcaactacccggcgatctccgccgtcttc 420 |||| | || |||||| || || ||||||||||||| ||||| ||||| | ||||||| Sbjct: 64655 tgcaggcacaccttcagttccgccagcgacctcaactatccggccatctcagtcgtcttc 64596 Query: 421 accgatcagccggccaccccgctgacggtgcgccgcaccgtgacgaacgtcgg-cctccg 479 |||| ||||| ||| ||||||||||||||||||| || |||||||| || ||||| Sbjct: 64595 gccgaccagccatccaaggcgctgacggtgcgccgcactgtcacgaacgttggtcctcca 64536 Query: 480 tcgtcgacgtac 491 || ||||||||| Sbjct: 64535 tcttcgacgtac 64524
>gb|BT024067.1| Zea mays clone EL01N0448C11 mRNA sequence Length = 2351 Score = 426 bits (215), Expect = e-116 Identities = 410/475 (86%) Strand = Plus / Plus Query: 1 agcgaccgccgccgcgtcgggttcaacatcctgtcggggacgtccatgtcgtgcccgcac 60 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1414 agcgaccgccggcgggtcggcttcaacatcctgtcggggacgtccatgtcgtgcccgcac 1473 Query: 61 gtcgccggcgtggccgcgctgctcaaggcaagccacccggactggagccctgcgcagatc 120 |||||||||||||| |||||| ||||||| |||||||||||||||||||| ||| ||||| Sbjct: 1474 gtcgccggcgtggctgcgctgatcaaggccagccacccggactggagccccgcgaagatc 1533 Query: 121 aagtcggcgctcatgaccaccgcctacgtccacgacaacacctaccacgtgctgaaggac 180 ||||| ||||| ||||||||||| ||||||||||||||||| |||| |||||||||| Sbjct: 1534 aagtccgcgctgatgaccaccgcgtacgtccacgacaacacgtaccggtcgctgaaggac 1593 Query: 181 gcggcgaccggcgaggcgtccacgccattcgagcacggcgccggccacatacacccggtg 240 ||||| |||||| ||||||||||||| ||||| ||||| || || |||||||||||| || Sbjct: 1594 gcggccaccggcaaggcgtccacgccgttcgatcacggagctgggcacatacacccgctg 1653 Query: 241 cgagcgctcagcccaggcctggtctacgacattgggcagaacgagtacctcgagttcctc 300 || || |||| ||| ||||||||||||||||| || ||| |||| ||||| ||||||||| Sbjct: 1654 cgtgccctcaaccctggcctggtctacgacatcggccaggacgactacctggagttcctc 1713 Query: 301 tgcacgcagaacctgacgccgacgcagctcaagggcttcaccaagaactccaacatgaca 360 ||| | |||||||||||||| |||||||| | ||||||||||||||| | || |||| Sbjct: 1714 tgcgtggagaacctgacgccgttgcagctcaggtccttcaccaagaactcgagcaagaca 1773 Query: 361 tgcaagggcagcttcagctcgcccggcgacctcaactacccggcgatctccgccgtcttc 420 |||||| || |||||||||||| || ||| | || || ||||| |||||||| |||||| Sbjct: 1774 tgcaagcacaccttcagctcgccgggtgacttgaattatccggccatctccgcggtcttc 1833 Query: 421 accgatcagccggccaccccgctgacggtgcgccgcaccgtgacgaacgtcggcc 475 | || ||||| | | ||||||||||||| |||||||||||||||||||||| Sbjct: 1834 gcggagcagccatctgctgcgctgacggtgcgtcgcaccgtgacgaacgtcggcc 1888
>gb|AY107161.1| Zea mays PCO101731 mRNA sequence Length = 1572 Score = 426 bits (215), Expect = e-116 Identities = 410/475 (86%) Strand = Plus / Plus Query: 1 agcgaccgccgccgcgtcgggttcaacatcctgtcggggacgtccatgtcgtgcccgcac 60 ||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 859 agcgaccgccggcgggtcggcttcaacatcctgtcggggacgtccatgtcgtgcccgcac 918 Query: 61 gtcgccggcgtggccgcgctgctcaaggcaagccacccggactggagccctgcgcagatc 120 |||||||||||||| |||||| ||||||| |||||||||||||||||||| ||| ||||| Sbjct: 919 gtcgccggcgtggctgcgctgatcaaggccagccacccggactggagccccgcgaagatc 978 Query: 121 aagtcggcgctcatgaccaccgcctacgtccacgacaacacctaccacgtgctgaaggac 180 ||||| ||||| ||||||||||| ||||||||||||||||| |||| |||||||||| Sbjct: 979 aagtccgcgctgatgaccaccgcgtacgtccacgacaacacgtaccggtcgctgaaggac 1038 Query: 181 gcggcgaccggcgaggcgtccacgccattcgagcacggcgccggccacatacacccggtg 240 ||||| |||||| ||||||||||||| ||||| ||||| || || |||||||||||| || Sbjct: 1039 gcggccaccggcaaggcgtccacgccgttcgatcacggagctgggcacatacacccgctg 1098 Query: 241 cgagcgctcagcccaggcctggtctacgacattgggcagaacgagtacctcgagttcctc 300 || || |||| ||| ||||||||||||||||| || ||| |||| ||||| ||||||||| Sbjct: 1099 cgtgccctcaaccctggcctggtctacgacatcggccaggacgactacctggagttcctc 1158 Query: 301 tgcacgcagaacctgacgccgacgcagctcaagggcttcaccaagaactccaacatgaca 360 ||| | |||||||||||||| |||||||| | ||||||||||||||| | || |||| Sbjct: 1159 tgcgtggagaacctgacgccgttgcagctcaggtccttcaccaagaactcgagcaagaca 1218 Query: 361 tgcaagggcagcttcagctcgcccggcgacctcaactacccggcgatctccgccgtcttc 420 |||||| || |||||||||||| || ||| | || || ||||| |||||||| |||||| Sbjct: 1219 tgcaagcacaccttcagctcgccgggtgacttgaattatccggccatctccgcggtcttc 1278 Query: 421 accgatcagccggccaccccgctgacggtgcgccgcaccgtgacgaacgtcggcc 475 | || ||||| | | ||||||||||||| |||||||||||||||||||||| Sbjct: 1279 gcggagcagccatctgctgcgctgacggtgcgtcgcaccgtgacgaacgtcggcc 1333
>ref|XM_468091.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2653 Score = 89.7 bits (45), Expect = 8e-15 Identities = 104/121 (85%), Gaps = 2/121 (1%) Strand = Plus / Plus Query: 21 gttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgct 80 |||||||||| | || || |||||||||||||||||||||||| |||| | |||||||| Sbjct: 1708 gttcaacatcatctccggcacgtccatgtcgtgcccgcacgtcagcggcctcgccgcgct 1767 Query: 81 gctcaaggcaagc-cacccggactggagccctgcgcagatcaagtcggcgctcatgacca 139 |||| | || || || |||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 1768 gctcc-gccaggcgcaaccggactggagcccggcggcgatcaagtcggcgctcatgacca 1826 Query: 140 c 140 | Sbjct: 1827 c 1827
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 89.7 bits (45), Expect = 8e-15 Identities = 104/121 (85%), Gaps = 2/121 (1%) Strand = Plus / Minus Query: 21 gttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgct 80 |||||||||| | || || |||||||||||||||||||||||| |||| | |||||||| Sbjct: 33004632 gttcaacatcatctccggcacgtccatgtcgtgcccgcacgtcagcggcctcgccgcgct 33004573 Query: 81 gctcaaggcaagc-cacccggactggagccctgcgcagatcaagtcggcgctcatgacca 139 |||| | || || || |||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 33004572 gctc-cgccaggcgcaaccggactggagcccggcggcgatcaagtcggcgctcatgacca 33004514 Query: 140 c 140 | Sbjct: 33004513 c 33004513 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 37 gggacgtccatgtcgtgcccgcacgtcgccggcgt 71 ||||||||||||||||||||||||||||||||||| Sbjct: 5530855 gggacgtccatgtcgtgcccgcacgtcgccggcgt 5530821 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 32 tgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctgctcaaggcaa 91 |||| |||||||||||| | |||||||||||| | | ||||| |||||||||||| || Sbjct: 9712596 tgtctgggacgtccatggcatgcccgcacgtctcggcggtggcggcgctgctcaagtcag 9712537 Query: 92 gccacccggactgg 105 |||||||||||| Sbjct: 9712536 ttcacccggactgg 9712523 Score = 48.1 bits (24), Expect = 0.028 Identities = 48/56 (85%) Strand = Plus / Minus Query: 32 tgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctgctcaag 87 |||| |||||||||||| | |||||||||||| | | ||||| |||||||||||| Sbjct: 9757748 tgtctgggacgtccatggcatgcccgcacgtctcggcggtggcggcgctgctcaag 9757693 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 385 ggcgacctcaactacccggcgatctc 410 ||||||||||||||||||||| |||| Sbjct: 33027318 ggcgacctcaactacccggcgttctc 33027293
>dbj|AP004846.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1293_A01 Length = 139121 Score = 89.7 bits (45), Expect = 8e-15 Identities = 104/121 (85%), Gaps = 2/121 (1%) Strand = Plus / Minus Query: 21 gttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgct 80 |||||||||| | || || |||||||||||||||||||||||| |||| | |||||||| Sbjct: 50572 gttcaacatcatctccggcacgtccatgtcgtgcccgcacgtcagcggcctcgccgcgct 50513 Query: 81 gctcaaggcaagc-cacccggactggagccctgcgcagatcaagtcggcgctcatgacca 139 |||| | || || || |||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 50512 gctc-cgccaggcgcaaccggactggagcccggcggcgatcaagtcggcgctcatgacca 50454 Query: 140 c 140 | Sbjct: 50453 c 50453 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 385 ggcgacctcaactacccggcgatctc 410 ||||||||||||||||||||| |||| Sbjct: 73258 ggcgacctcaactacccggcgttctc 73233
>dbj|AK121728.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082C22, full insert sequence Length = 2653 Score = 89.7 bits (45), Expect = 8e-15 Identities = 104/121 (85%), Gaps = 2/121 (1%) Strand = Plus / Plus Query: 21 gttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgct 80 |||||||||| | || || |||||||||||||||||||||||| |||| | |||||||| Sbjct: 1708 gttcaacatcatctccggcacgtccatgtcgtgcccgcacgtcagcggcctcgccgcgct 1767 Query: 81 gctcaaggcaagc-cacccggactggagccctgcgcagatcaagtcggcgctcatgacca 139 |||| | || || || |||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 1768 gctcc-gccaggcgcaaccggactggagcccggcggcgatcaagtcggcgctcatgacca 1826 Query: 140 c 140 | Sbjct: 1827 c 1827
>dbj|AK106527.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-F01, full insert sequence Length = 2648 Score = 89.7 bits (45), Expect = 8e-15 Identities = 104/121 (85%), Gaps = 2/121 (1%) Strand = Plus / Plus Query: 21 gttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgct 80 |||||||||| | || || |||||||||||||||||||||||| |||| | |||||||| Sbjct: 1611 gttcaacatcatctccggcacgtccatgtcgtgcccgcacgtcagcggcctcgccgcgct 1670 Query: 81 gctcaaggcaagc-cacccggactggagccctgcgcagatcaagtcggcgctcatgacca 139 |||| | || || || |||||||||||||| ||| ||||||||||||||||||||||| Sbjct: 1671 gctcc-gccaggcgcaaccggactggagcccggcggcgatcaagtcggcgctcatgacca 1729 Query: 140 c 140 | Sbjct: 1730 c 1730
>ref|XM_469861.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2568 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 2 gcgaccgccgccgcgtcgggttcaacatcctgtcggggacgtccatgtcgtgcccgcacg 61 ||||| ||||||||||||| ||||||||| | || ||||||||||||||||||||||||| Sbjct: 1595 gcgacagccgccgcgtcggattcaacatcatctccgggacgtccatgtcgtgcccgcacg 1654 Query: 62 t 62 | Sbjct: 1655 t 1655
>gb|BT018407.1| Zea mays clone EL01N0326A09.d mRNA sequence Length = 1456 Score = 81.8 bits (41), Expect = 2e-12 Identities = 107/129 (82%) Strand = Plus / Plus Query: 21 gttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgct 80 |||||||||||||||||| ||||||||| | ||||||||||| | ||| | || ||||| Sbjct: 412 gttcaacatcctgtcgggcacgtccatggcctgcccgcacgtgtcgggcctcgcggcgct 471 Query: 81 gctcaaggcaagccacccggactggagccctgcgcagatcaagtcggcgctcatgaccac 140 ||| ||||| |||||| ||||||||| ||| ||||||||||||||| ||||| || Sbjct: 472 gctgaaggcggcgcacccgagctggagccccgcggcgatcaagtcggcgctgatgacgac 531 Query: 141 cgcctacgt 149 ||| ||||| Sbjct: 532 cgcgtacgt 540
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 2 gcgaccgccgccgcgtcgggttcaacatcctgtcggggacgtccatgtcgtgcccgcacg 61 ||||| ||||||||||||| ||||||||| | || ||||||||||||||||||||||||| Sbjct: 31185076 gcgacagccgccgcgtcggattcaacatcatctccgggacgtccatgtcgtgcccgcacg 31185017 Query: 62 t 62 | Sbjct: 31185016 t 31185016 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 10 cgccgcgtcgggttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggc 69 |||||||||| ||||||||| | || || ||||||||||||||||||||||| |||| Sbjct: 22512486 cgccgcgtcgccttcaacatcatctccggcacgtccatgtcgtgcccgcacgtgagcggc 22512545 Query: 70 gtggccgcgctgct 83 | ||||||||||| Sbjct: 22512546 ctcgccgcgctgct 22512559 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 34 tcggggacgtccatgtcgtgcccgcacgtcgccggc 69 ||||| |||||||||||||||||||||||| ||||| Sbjct: 3134224 tcgggcacgtccatgtcgtgcccgcacgtctccggc 3134189 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 123 gtcggcgctcatgaccaccgcctac 147 ||||||||||||||||||||||||| Sbjct: 22512599 gtcggcgctcatgaccaccgcctac 22512623 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 21 gttcaacatcctgtcggggacgtccatgtcgtgcccgcacg 61 |||||||||||||||||| || || ||| |||||||||||| Sbjct: 7529877 gttcaacatcctgtcgggcacctcgatggcgtgcccgcacg 7529837 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Plus Query: 178 gacgcggcgaccggcgaggcgtccacgccattcgagcacggcgccggccac 228 |||||||||||||||| | | ||||||| ||||| |||||||||||||| Sbjct: 22512663 gacgcggcgaccggcgcgcccgccacgccgttcgactacggcgccggccac 22512713 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 387 cgacctcaactacccggcgatctccg 412 |||||||||||||||| ||||||||| Sbjct: 7529505 cgacctcaactacccgtcgatctccg 7529480
>gb|AC084282.6| Oryza sativa chromosome 3 BAC OSJNBb0048A17 genomic sequence, complete sequence Length = 128017 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 2 gcgaccgccgccgcgtcgggttcaacatcctgtcggggacgtccatgtcgtgcccgcacg 61 ||||| ||||||||||||| ||||||||| | || ||||||||||||||||||||||||| Sbjct: 105717 gcgacagccgccgcgtcggattcaacatcatctccgggacgtccatgtcgtgcccgcacg 105658 Query: 62 t 62 | Sbjct: 105657 t 105657
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 2 gcgaccgccgccgcgtcgggttcaacatcctgtcggggacgtccatgtcgtgcccgcacg 61 ||||| ||||||||||||| ||||||||| | || ||||||||||||||||||||||||| Sbjct: 31275599 gcgacagccgccgcgtcggattcaacatcatctccgggacgtccatgtcgtgcccgcacg 31275540 Query: 62 t 62 | Sbjct: 31275539 t 31275539 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 10 cgccgcgtcgggttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggc 69 |||||||||| ||||||||| | || || ||||||||||||||||||||||| |||| Sbjct: 22505515 cgccgcgtcgccttcaacatcatctccggcacgtccatgtcgtgcccgcacgtgagcggc 22505574 Query: 70 gtggccgcgctgct 83 | ||||||||||| Sbjct: 22505575 ctcgccgcgctgct 22505588 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 34 tcggggacgtccatgtcgtgcccgcacgtcgccggc 69 ||||| |||||||||||||||||||||||| ||||| Sbjct: 3134335 tcgggcacgtccatgtcgtgcccgcacgtctccggc 3134300 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 123 gtcggcgctcatgaccaccgcctac 147 ||||||||||||||||||||||||| Sbjct: 22505628 gtcggcgctcatgaccaccgcctac 22505652 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 21 gttcaacatcctgtcggggacgtccatgtcgtgcccgcacg 61 |||||||||||||||||| || || ||| |||||||||||| Sbjct: 7527712 gttcaacatcctgtcgggcacctcgatggcgtgcccgcacg 7527672 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Plus Query: 178 gacgcggcgaccggcgaggcgtccacgccattcgagcacggcgccggccac 228 |||||||||||||||| | | ||||||| ||||| |||||||||||||| Sbjct: 22505692 gacgcggcgaccggcgcgcccgccacgccgttcgactacggcgccggccac 22505742 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 387 cgacctcaactacccggcgatctccg 412 |||||||||||||||| ||||||||| Sbjct: 7527340 cgacctcaactacccgtcgatctccg 7527315
>dbj|AK103255.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033123P12, full insert sequence Length = 2813 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 2 gcgaccgccgccgcgtcgggttcaacatcctgtcggggacgtccatgtcgtgcccgcacg 61 ||||| ||||||||||||| ||||||||| | || ||||||||||||||||||||||||| Sbjct: 1843 gcgacagccgccgcgtcggattcaacatcatctccgggacgtccatgtcgtgcccgcacg 1902 Query: 62 t 62 | Sbjct: 1903 t 1903
>dbj|AK101646.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033055P14, full insert sequence Length = 2667 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Plus Query: 2 gcgaccgccgccgcgtcgggttcaacatcctgtcggggacgtccatgtcgtgcccgcacg 61 ||||| ||||||||||||| ||||||||| | || ||||||||||||||||||||||||| Sbjct: 1648 gcgacagccgccgcgtcggattcaacatcatctccgggacgtccatgtcgtgcccgcacg 1707 Query: 62 t 62 | Sbjct: 1708 t 1708
>ref|XM_482713.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1018 Score = 77.8 bits (39), Expect = 3e-11 Identities = 114/139 (82%) Strand = Plus / Minus Query: 22 ttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctg 81 ||||||||||| ||||| ||||||||| | ||||||||| || ||||| | ||||| || Sbjct: 1000 ttcaacatcctctcgggcacgtccatggcttgcccgcacatctccggcctcgccgcattg 941 Query: 82 ctcaaggcaagccacccggactggagccctgcgcagatcaagtcggcgctcatgaccacc 141 |||||||| || || ||||||||| ||| ||||||||| ||||||||||||||| Sbjct: 940 ctcaaggcggcgcatcctacctggagccccgcggcgatcaagtcagcgctcatgaccacc 881 Query: 142 gcctacgtccacgacaaca 160 |||||| || | ||||||| Sbjct: 880 gcctacatcaaggacaaca 862
>ref|XM_482712.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2391 Score = 77.8 bits (39), Expect = 3e-11 Identities = 114/139 (82%) Strand = Plus / Plus Query: 22 ttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctg 81 ||||||||||| ||||| ||||||||| | ||||||||| || ||||| | ||||| || Sbjct: 1675 ttcaacatcctctcgggcacgtccatggcttgcccgcacatctccggcctcgccgcattg 1734 Query: 82 ctcaaggcaagccacccggactggagccctgcgcagatcaagtcggcgctcatgaccacc 141 |||||||| || || ||||||||| ||| ||||||||| ||||||||||||||| Sbjct: 1735 ctcaaggcggcgcatcctacctggagccccgcggcgatcaagtcagcgctcatgaccacc 1794 Query: 142 gcctacgtccacgacaaca 160 |||||| || | ||||||| Sbjct: 1795 gcctacatcaaggacaaca 1813
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 77.8 bits (39), Expect = 3e-11 Identities = 114/139 (82%) Strand = Plus / Plus Query: 22 ttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctg 81 ||||||||||| ||||| ||||||||| | ||||||||| || ||||| | ||||| || Sbjct: 22105577 ttcaacatcctctcgggcacgtccatggcttgcccgcacatctccggcctcgccgcattg 22105636 Query: 82 ctcaaggcaagccacccggactggagccctgcgcagatcaagtcggcgctcatgaccacc 141 |||||||| || || ||||||||| ||| ||||||||| ||||||||||||||| Sbjct: 22105637 ctcaaggcggcgcatcctacctggagccccgcggcgatcaagtcagcgctcatgaccacc 22105696 Query: 142 gcctacgtccacgacaaca 160 |||||| || | ||||||| Sbjct: 22105697 gcctacatcaaggacaaca 22105715 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 27 catcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctgctcaa 86 ||||||||| || ||||||||| ||||||||||| || |||||||| || ||| ||||| Sbjct: 14358546 catcctgtccggcacgtccatggcgtgcccgcacatctccggcgtgatcgggctcctcaa 14358605 Query: 87 ggc 89 ||| Sbjct: 14358606 ggc 14358608 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 cctaccacgtgctgaaggac 180 |||||||||||||||||||| Sbjct: 13051003 cctaccacgtgctgaaggac 13050984
>dbj|AP003871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1117_F10 Length = 169948 Score = 77.8 bits (39), Expect = 3e-11 Identities = 114/139 (82%) Strand = Plus / Plus Query: 22 ttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctg 81 ||||||||||| ||||| ||||||||| | ||||||||| || ||||| | ||||| || Sbjct: 68540 ttcaacatcctctcgggcacgtccatggcttgcccgcacatctccggcctcgccgcattg 68599 Query: 82 ctcaaggcaagccacccggactggagccctgcgcagatcaagtcggcgctcatgaccacc 141 |||||||| || || ||||||||| ||| ||||||||| ||||||||||||||| Sbjct: 68600 ctcaaggcggcgcatcctacctggagccccgcggcgatcaagtcagcgctcatgaccacc 68659 Query: 142 gcctacgtccacgacaaca 160 |||||| || | ||||||| Sbjct: 68660 gcctacatcaaggacaaca 68678
>ref|XM_478847.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2445 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 22 ttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctg 81 ||||||||||| |||||||| |||||| |||||||||||| ||||||||| || |||||| Sbjct: 1639 ttcaacatcctctcggggacatccatggcgtgcccgcacgccgccggcgtcgcggcgctg 1698 Query: 82 ctcaag 87 ||||| Sbjct: 1699 atcaag 1704
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 22 ttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctg 81 ||||||||||| |||||||| |||||| |||||||||||| ||||||||| || |||||| Sbjct: 23346268 ttcaacatcctctcggggacatccatggcgtgcccgcacgccgccggcgtcgcggcgctg 23346327 Query: 82 ctcaag 87 ||||| Sbjct: 23346328 atcaag 23346333
>dbj|AP004182.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1199_H01 Length = 107252 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 22 ttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctg 81 ||||||||||| |||||||| |||||| |||||||||||| ||||||||| || |||||| Sbjct: 27492 ttcaacatcctctcggggacatccatggcgtgcccgcacgccgccggcgtcgcggcgctg 27551 Query: 82 ctcaag 87 ||||| Sbjct: 27552 atcaag 27557
>dbj|AP003804.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1065_B06 Length = 113170 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 22 ttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctg 81 ||||||||||| |||||||| |||||| |||||||||||| ||||||||| || |||||| Sbjct: 101526 ttcaacatcctctcggggacatccatggcgtgcccgcacgccgccggcgtcgcggcgctg 101585 Query: 82 ctcaag 87 ||||| Sbjct: 101586 atcaag 101591
>dbj|AK107610.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-C05, full insert sequence Length = 2445 Score = 75.8 bits (38), Expect = 1e-10 Identities = 59/66 (89%) Strand = Plus / Plus Query: 22 ttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctg 81 ||||||||||| |||||||| |||||| |||||||||||| ||||||||| || |||||| Sbjct: 1639 ttcaacatcctctcggggacatccatggcgtgcccgcacgccgccggcgtcgcggcgctg 1698 Query: 82 ctcaag 87 ||||| Sbjct: 1699 atcaag 1704
>ref|XM_464493.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2610 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 37 gggacgtccatgtcgtgcccgcacgtcgccggcgt 71 ||||||||||||||||||||||||||||||||||| Sbjct: 1773 gggacgtccatgtcgtgcccgcacgtcgccggcgt 1807
>ref|XM_464494.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1408 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 37 gggacgtccatgtcgtgcccgcacgtcgccggcgt 71 ||||||||||||||||||||||||||||||||||| Sbjct: 569 gggacgtccatgtcgtgcccgcacgtcgccggcgt 603
>dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0026H03 Length = 151827 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Minus Query: 37 gggacgtccatgtcgtgcccgcacgtcgccggcgt 71 ||||||||||||||||||||||||||||||||||| Sbjct: 75590 gggacgtccatgtcgtgcccgcacgtcgccggcgt 75556
>dbj|AK106394.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-F05, full insert sequence Length = 1408 Score = 69.9 bits (35), Expect = 8e-09 Identities = 35/35 (100%) Strand = Plus / Plus Query: 37 gggacgtccatgtcgtgcccgcacgtcgccggcgt 71 ||||||||||||||||||||||||||||||||||| Sbjct: 569 gggacgtccatgtcgtgcccgcacgtcgccggcgt 603
>ref|NM_191858.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2337 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 24 caacatcctgtcggggacgtccatgtcgtgcccgcacgtc 63 ||||||| |||||||||| ||||||||||||||||||||| Sbjct: 1683 caacatcatgtcggggacatccatgtcgtgcccgcacgtc 1722
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 43 tccatgtcgtgcccgcacgtcgccggcgtggccgcgctgctcaaggcaagccacccggac 102 |||||||||||||| |||||||||||||| |||| || |||||||| |||||| ||| Sbjct: 18366958 tccatgtcgtgcccccacgtcgccggcgtcgccggcctcctcaaggccctccaccccgac 18367017 Query: 103 tggagccc 110 |||||||| Sbjct: 18367018 tggagccc 18367025 Score = 61.9 bits (31), Expect = 2e-06 Identities = 48/51 (94%), Gaps = 2/51 (3%) Strand = Plus / Plus Query: 94 cacccggactggagccct-gcgcagatcaagtcggcgctcatgaccaccgc 143 ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 16304238 cacccggactggagccccagcgca-atcaagtcggcgctcatgaccaccgc 16304287
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 24 caacatcctgtcggggacgtccatgtcgtgcccgcacgtc 63 ||||||| |||||||||| ||||||||||||||||||||| Sbjct: 30338327 caacatcatgtcggggacatccatgtcgtgcccgcacgtc 30338288 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 37 gggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctgctcaaggcaagccac 96 |||||||| ||| |||||||||||| |||||||||||| || |||| ||| ||| Sbjct: 37641895 gggacgtcgatggcgtgcccgcacgccgccggcgtggcggcattgctgcgggcggcgcac 37641954 Query: 97 ccggactggagccctgcgcagatcaagtcggcgctcatgaccaccgc 143 |||||||||||||| || ||||||||||||| | ||||||||||| Sbjct: 37641955 ccggactggagcccggccatgatcaagtcggcgatgatgaccaccgc 37642001 Score = 44.1 bits (22), Expect = 0.44 Identities = 40/46 (86%) Strand = Plus / Plus Query: 95 acccggactggagccctgcgcagatcaagtcggcgctcatgaccac 140 |||| ||||||| ||| ||| ||||||||||||| |||||||||| Sbjct: 29101258 accccgactggacccccgcgatgatcaagtcggcgatcatgaccac 29101303 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 tgacggtgcgccgcaccgtgacga 466 |||||||||||||| ||||||||| Sbjct: 3293741 tgacggtgcgccgctccgtgacga 3293718
>dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0042A10 Length = 146840 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 24 caacatcctgtcggggacgtccatgtcgtgcccgcacgtc 63 ||||||| |||||||||| ||||||||||||||||||||| Sbjct: 126646 caacatcatgtcggggacatccatgtcgtgcccgcacgtc 126607
>dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0456A01 Length = 143710 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 24 caacatcctgtcggggacgtccatgtcgtgcccgcacgtc 63 ||||||| |||||||||| ||||||||||||||||||||| Sbjct: 24054 caacatcatgtcggggacatccatgtcgtgcccgcacgtc 24015
>dbj|AP005633.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463G11 Length = 154188 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 43 tccatgtcgtgcccgcacgtcgccggcgtggccgcgctgctcaaggcaagccacccggac 102 |||||||||||||| |||||||||||||| |||| || |||||||| |||||| ||| Sbjct: 81694 tccatgtcgtgcccccacgtcgccggcgtcgccggcctcctcaaggccctccaccccgac 81753 Query: 103 tggagccc 110 |||||||| Sbjct: 81754 tggagccc 81761
>dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0463D04 Length = 145828 Score = 63.9 bits (32), Expect = 5e-07 Identities = 59/68 (86%) Strand = Plus / Plus Query: 43 tccatgtcgtgcccgcacgtcgccggcgtggccgcgctgctcaaggcaagccacccggac 102 |||||||||||||| |||||||||||||| |||| || |||||||| |||||| ||| Sbjct: 28832 tccatgtcgtgcccccacgtcgccggcgtcgccggcctcctcaaggccctccaccccgac 28891 Query: 103 tggagccc 110 |||||||| Sbjct: 28892 tggagccc 28899
>dbj|AK108195.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-C06, full insert sequence Length = 1307 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 24 caacatcctgtcggggacgtccatgtcgtgcccgcacgtc 63 ||||||| |||||||||| ||||||||||||||||||||| Sbjct: 511 caacatcatgtcggggacatccatgtcgtgcccgcacgtc 550
>ref|NM_190775.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2262 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 37 gggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctgctcaaggcaagccac 96 |||||||| ||| |||||||||||| |||||||||||| || |||| ||| ||| Sbjct: 1618 gggacgtcgatggcgtgcccgcacgccgccggcgtggcggcattgctgcgggcggcgcac 1677 Query: 97 ccggactggagccctgcgcagatcaagtcggcgctcatgaccaccgc 143 |||||||||||||| || ||||||||||||| | ||||||||||| Sbjct: 1678 ccggactggagcccggccatgatcaagtcggcgatgatgaccaccgc 1724
>dbj|AP003286.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0677H08 Length = 178830 Score = 61.9 bits (31), Expect = 2e-06 Identities = 88/107 (82%) Strand = Plus / Plus Query: 37 gggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctgctcaaggcaagccac 96 |||||||| ||| |||||||||||| |||||||||||| || |||| ||| ||| Sbjct: 102369 gggacgtcgatggcgtgcccgcacgccgccggcgtggcggcattgctgcgggcggcgcac 102428 Query: 97 ccggactggagccctgcgcagatcaagtcggcgctcatgaccaccgc 143 |||||||||||||| || ||||||||||||| | ||||||||||| Sbjct: 102429 ccggactggagcccggccatgatcaagtcggcgatgatgaccaccgc 102475
>dbj|AP005570.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1344_B01 Length = 170912 Score = 61.9 bits (31), Expect = 2e-06 Identities = 48/51 (94%), Gaps = 2/51 (3%) Strand = Plus / Plus Query: 94 cacccggactggagccct-gcgcagatcaagtcggcgctcatgaccaccgc 143 ||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 120754 cacccggactggagccccagcgca-atcaagtcggcgctcatgaccaccgc 120803
>gb|AC133860.5| Oryza sativa chromosome 3 BAC OSJNBa0091E13 genomic sequence, complete sequence Length = 157397 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 10 cgccgcgtcgggttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggc 69 |||||||||| ||||||||| | || || ||||||||||||||||||||||| |||| Sbjct: 155660 cgccgcgtcgccttcaacatcatctccggcacgtccatgtcgtgcccgcacgtgagcggc 155601 Query: 70 gtggccgcgctgct 83 | ||||||||||| Sbjct: 155600 ctcgccgcgctgct 155587 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 123 gtcggcgctcatgaccaccgcctac 147 ||||||||||||||||||||||||| Sbjct: 155547 gtcggcgctcatgaccaccgcctac 155523 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Minus Query: 178 gacgcggcgaccggcgaggcgtccacgccattcgagcacggcgccggccac 228 |||||||||||||||| | | ||||||| ||||| |||||||||||||| Sbjct: 155483 gacgcggcgaccggcgcgcccgccacgccgttcgactacggcgccggccac 155433
>gb|AC109601.9| Oryza sativa chromosome 3 BAC OSJNBa0004G03 genomic sequence, complete sequence Length = 145590 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 10 cgccgcgtcgggttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggc 69 |||||||||| ||||||||| | || || ||||||||||||||||||||||| |||| Sbjct: 107733 cgccgcgtcgccttcaacatcatctccggcacgtccatgtcgtgcccgcacgtgagcggc 107792 Query: 70 gtggccgcgctgct 83 | ||||||||||| Sbjct: 107793 ctcgccgcgctgct 107806 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 123 gtcggcgctcatgaccaccgcctac 147 ||||||||||||||||||||||||| Sbjct: 107846 gtcggcgctcatgaccaccgcctac 107870 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Plus Query: 178 gacgcggcgaccggcgaggcgtccacgccattcgagcacggcgccggccac 228 |||||||||||||||| | | ||||||| ||||| |||||||||||||| Sbjct: 107910 gacgcggcgaccggcgcgcccgccacgccgttcgactacggcgccggccac 107960
>dbj|AK105749.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-B09, full insert sequence Length = 2517 Score = 60.0 bits (30), Expect = 7e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 10 cgccgcgtcgggttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccggc 69 |||||||||| ||||||||| | || || ||||||||||||||||||||||| |||| Sbjct: 1619 cgccgcgtcgccttcaacatcatctccggcacgtccatgtcgtgcccgcacgtgagcggc 1678 Query: 70 gtggccgcgctgct 83 | ||||||||||| Sbjct: 1679 ctcgccgcgctgct 1692 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 123 gtcggcgctcatgaccaccgcctac 147 ||||||||||||||||||||||||| Sbjct: 1732 gtcggcgctcatgaccaccgcctac 1756 Score = 46.1 bits (23), Expect = 0.11 Identities = 44/51 (86%) Strand = Plus / Plus Query: 178 gacgcggcgaccggcgaggcgtccacgccattcgagcacggcgccggccac 228 |||||||||||||||| | | ||||||| ||||| |||||||||||||| Sbjct: 1796 gacgcggcgaccggcgcgcccgccacgccgttcgactacggcgccggccac 1846
>ref|XM_472541.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2331 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 40 acgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctgctc 84 ||||||||| ||| |||||||||||||||||||| ||||||||| Sbjct: 1639 acgtccatggcgtcgccgcacgtcgccggcgtggcggcgctgctc 1683
>emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084A10, complete sequence Length = 144811 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 40 acgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctgctc 84 ||||||||| ||| |||||||||||||||||||| ||||||||| Sbjct: 18692 acgtccatggcgtcgccgcacgtcgccggcgtggcggcgctgctc 18736
>dbj|AK105112.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-G01, full insert sequence Length = 2571 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 40 acgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctgctc 84 ||||||||| ||| |||||||||||||||||||| ||||||||| Sbjct: 1653 acgtccatggcgtcgccgcacgtcgccggcgtggcggcgctgctc 1697
>ref|XM_470262.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1992 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 34 tcggggacgtccatgtcgtgcccgcacgtcgccggc 69 ||||| |||||||||||||||||||||||| ||||| Sbjct: 1225 tcgggcacgtccatgtcgtgcccgcacgtctccggc 1260
>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBa0087J09, complete sequence Length = 153351 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 21 gttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccgg 68 ||||||| || ||||||||||||||||| | ||||||||||| ||||| Sbjct: 32614 gttcaacctcgtgtcggggacgtccatggcctgcccgcacgtggccgg 32567
>gb|AC099401.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1134F05, complete sequence Length = 101799 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 34 tcggggacgtccatgtcgtgcccgcacgtcgccggc 69 ||||| |||||||||||||||||||||||| ||||| Sbjct: 57237 tcgggcacgtccatgtcgtgcccgcacgtctccggc 57202
>dbj|AK108516.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-144-A10, full insert sequence Length = 1078 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 34 tcggggacgtccatgtcgtgcccgcacgtcgccggc 69 ||||| |||||||||||||||||||||||| ||||| Sbjct: 776 tcgggcacgtccatgtcgtgcccgcacgtctccggc 741
>dbj|AK071242.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023084K04, full insert sequence Length = 1153 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 34 tcggggacgtccatgtcgtgcccgcacgtcgccggc 69 ||||| |||||||||||||||||||||||| ||||| Sbjct: 119 tcgggcacgtccatgtcgtgcccgcacgtctccggc 154
>ref|XM_481633.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2289 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 27 catcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctgctcaa 86 ||||||||| || ||||||||| ||||||||||| || |||||||| || ||| ||||| Sbjct: 1632 catcctgtccggcacgtccatggcgtgcccgcacatctccggcgtgatcgggctcctcaa 1691 Query: 87 ggc 89 ||| Sbjct: 1692 ggc 1694
>ref|XM_475298.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2286 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 40 acgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctgctcaaggcaagccacccg 99 |||||||||||||||||||||| |||| ||||| |||||| ||||||| |||||| Sbjct: 1600 acgtccatgtcgtgcccgcacgcgtccggggtggcggcgctgatcaaggccgtgcacccg 1659 Query: 100 gactggagccc 110 || |||||||| Sbjct: 1660 gagtggagccc 1670
>gb|AC119292.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0088F07, complete sequence Length = 139180 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 40 acgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctgctcaaggcaagccacccg 99 |||||||||||||||||||||| |||| ||||| |||||| ||||||| |||||| Sbjct: 63182 acgtccatgtcgtgcccgcacgcgtccggggtggcggcgctgatcaaggccgtgcacccg 63123 Query: 100 gactggagccc 110 || |||||||| Sbjct: 63122 gagtggagccc 63112
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 40 acgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctgctcaaggcaagccacccg 99 |||||||||||||||||||||| |||| ||||| |||||| ||||||| |||||| Sbjct: 21182399 acgtccatgtcgtgcccgcacgcgtccggggtggcggcgctgatcaaggccgtgcacccg 21182340 Query: 100 gactggagccc 110 || |||||||| Sbjct: 21182339 gagtggagccc 21182329
>dbj|AP004759.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0670E08 Length = 133106 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 27 catcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctgctcaa 86 ||||||||| || ||||||||| ||||||||||| || |||||||| || ||| ||||| Sbjct: 2829 catcctgtccggcacgtccatggcgtgcccgcacatctccggcgtgatcgggctcctcaa 2888 Query: 87 ggc 89 ||| Sbjct: 2889 ggc 2891
>dbj|AP003884.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1136_A10 Length = 101249 Score = 54.0 bits (27), Expect = 5e-04 Identities = 54/63 (85%) Strand = Plus / Plus Query: 27 catcctgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctgctcaa 86 ||||||||| || ||||||||| ||||||||||| || |||||||| || ||| ||||| Sbjct: 61626 catcctgtccggcacgtccatggcgtgcccgcacatctccggcgtgatcgggctcctcaa 61685 Query: 87 ggc 89 ||| Sbjct: 61686 ggc 61688
>dbj|AK067138.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096L15, full insert sequence Length = 2549 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 40 acgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctgctcaaggcaagccacccg 99 |||||||||||||||||||||| |||| ||||| |||||| ||||||| |||||| Sbjct: 1653 acgtccatgtcgtgcccgcacgcgtccggggtggcggcgctgatcaaggccgtgcacccg 1712 Query: 100 gactggagccc 110 || |||||||| Sbjct: 1713 gagtggagccc 1723
>dbj|AP005875.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0033K18 Length = 138487 Score = 52.0 bits (26), Expect = 0.002 Identities = 62/74 (83%) Strand = Plus / Minus Query: 32 tgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctgctcaaggcaa 91 |||| |||||||||||| | |||||||||||| | | ||||| |||||||||||| || Sbjct: 21667 tgtctgggacgtccatggcatgcccgcacgtctcggcggtggcggcgctgctcaagtcag 21608 Query: 92 gccacccggactgg 105 |||||||||||| Sbjct: 21607 ttcacccggactgg 21594 Score = 48.1 bits (24), Expect = 0.028 Identities = 48/56 (85%) Strand = Plus / Minus Query: 32 tgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctgctcaag 87 |||| |||||||||||| | |||||||||||| | | ||||| |||||||||||| Sbjct: 66819 tgtctgggacgtccatggcatgcccgcacgtctcggcggtggcggcgctgctcaag 66764
>gb|AC134239.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0042A11, complete sequence Length = 113049 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Minus Query: 21 gttcaacatcctgtcggggacgtccatgtcgtgcccgcacg 61 |||||||||||||||||| || || ||| |||||||||||| Sbjct: 58773 gttcaacatcctgtcgggcacctcgatggcgtgcccgcacg 58733 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Minus Query: 387 cgacctcaactacccggcgatctccg 412 |||||||||||||||| ||||||||| Sbjct: 58401 cgacctcaactacccgtcgatctccg 58376
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 48.1 bits (24), Expect = 0.028 Identities = 27/28 (96%) Strand = Plus / Minus Query: 67 ggcgtggccgcgctgctcaaggcaagcc 94 ||||||||| |||||||||||||||||| Sbjct: 2401925 ggcgtggcctcgctgctcaaggcaagcc 2401898 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 60 cgtcgccggcgtggccgcgctgctcaag 87 ||||||||||| ||||||||||||||| Sbjct: 2075346 cgtcgccggcgatgccgcgctgctcaag 2075373
>dbj|AK106911.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-A07, full insert sequence Length = 1659 Score = 48.1 bits (24), Expect = 0.028 Identities = 42/48 (87%) Strand = Plus / Plus Query: 21 gttcaacatcctgtcggggacgtccatgtcgtgcccgcacgtcgccgg 68 ||||||| || || |||||||||||||| | ||||||||||| ||||| Sbjct: 871 gttcaacctcgtgccggggacgtccatggcctgcccgcacgtggccgg 918
>dbj|AK100150.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023015F12, full insert sequence Length = 999 Score = 48.1 bits (24), Expect = 0.028 Identities = 36/40 (90%) Strand = Plus / Minus Query: 102 ctggagccctgcgcagatcaagtcggcgctcatgaccacc 141 ||||||||| ||| ||||||||| ||||||||||||||| Sbjct: 905 ctggagccccgcggcgatcaagtcagcgctcatgaccacc 866
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.11 Identities = 59/71 (83%) Strand = Plus / Plus Query: 40 acgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctgctcaaggcaagccacccg 99 |||||||||||||||||||| || ||||||| |||| ||| ||||| | ||| ||| Sbjct: 23878974 acgtccatgtcgtgcccgcaagtgtccggcgtcgccggcctgatcaagacgctccatccg 23879033 Query: 100 gactggagccc 110 ||||||||||| Sbjct: 23879034 gactggagccc 23879044
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 54 cccgcacgtcgccggcgtggccgcgct 80 |||||||||||||||||| |||||||| Sbjct: 7728337 cccgcacgtcgccggcgtcgccgcgct 7728311
>dbj|AP003616.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0490F09 Length = 149542 Score = 46.1 bits (23), Expect = 0.11 Identities = 59/71 (83%) Strand = Plus / Plus Query: 40 acgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctgctcaaggcaagccacccg 99 |||||||||||||||||||| || ||||||| |||| ||| ||||| | ||| ||| Sbjct: 8585 acgtccatgtcgtgcccgcaagtgtccggcgtcgccggcctgatcaagacgctccatccg 8644 Query: 100 gactggagccc 110 ||||||||||| Sbjct: 8645 gactggagccc 8655
>dbj|AP004279.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0556B08 Length = 136775 Score = 46.1 bits (23), Expect = 0.11 Identities = 59/71 (83%) Strand = Plus / Plus Query: 40 acgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctgctcaaggcaagccacccg 99 |||||||||||||||||||| || ||||||| |||| ||| ||||| | ||| ||| Sbjct: 118639 acgtccatgtcgtgcccgcaagtgtccggcgtcgccggcctgatcaagacgctccatccg 118698 Query: 100 gactggagccc 110 ||||||||||| Sbjct: 118699 gactggagccc 118709
>ref|XM_468097.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2073 Score = 44.1 bits (22), Expect = 0.44 Identities = 25/26 (96%) Strand = Plus / Plus Query: 385 ggcgacctcaactacccggcgatctc 410 ||||||||||||||||||||| |||| Sbjct: 1762 ggcgacctcaactacccggcgttctc 1787
>ref|NM_192217.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2274 Score = 44.1 bits (22), Expect = 0.44 Identities = 40/46 (86%) Strand = Plus / Plus Query: 95 acccggactggagccctgcgcagatcaagtcggcgctcatgaccac 140 |||| ||||||| ||| ||| ||||||||||||| |||||||||| Sbjct: 1637 accccgactggacccccgcgatgatcaagtcggcgatcatgaccac 1682
>ref|XM_567015.1| Cryptococcus neoformans var. neoformans JEC21 helicase (CNA06980) partial mRNA Length = 2329 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 364 aagggcagcttcagctcgcccg 385 |||||||||||||||||||||| Sbjct: 436 aagggcagcttcagctcgcccg 415
>dbj|AP003378.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0047E11 Length = 148109 Score = 44.1 bits (22), Expect = 0.44 Identities = 40/46 (86%) Strand = Plus / Plus Query: 95 acccggactggagccctgcgcagatcaagtcggcgctcatgaccac 140 |||| ||||||| ||| ||| ||||||||||||| |||||||||| Sbjct: 145616 accccgactggacccccgcgatgatcaagtcggcgatcatgaccac 145661
>dbj|AP003245.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0421H07 Length = 158126 Score = 44.1 bits (22), Expect = 0.44 Identities = 40/46 (86%) Strand = Plus / Plus Query: 95 acccggactggagccctgcgcagatcaagtcggcgctcatgaccac 140 |||| ||||||| ||| ||| ||||||||||||| |||||||||| Sbjct: 61624 accccgactggacccccgcgatgatcaagtcggcgatcatgaccac 61669
>dbj|AK110825.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-H07, full insert sequence Length = 2380 Score = 44.1 bits (22), Expect = 0.44 Identities = 61/74 (82%) Strand = Plus / Plus Query: 32 tgtcggggacgtccatgtcgtgcccgcacgtcgccggcgtggccgcgctgctcaaggcaa 91 |||| |||||||||||| | |||||||| ||| | | ||||| |||||||||||| || Sbjct: 1611 tgtctgggacgtccatggcatgcccgcatgtctcggcggtggcggcgctgctcaagtcag 1670 Query: 92 gccacccggactgg 105 |||||||||||| Sbjct: 1671 ttcacccggactgg 1684
>gb|AY105444.1| Zea mays PCO128743 mRNA sequence Length = 1006 Score = 44.1 bits (22), Expect = 0.44 Identities = 28/30 (93%) Strand = Plus / Plus Query: 118 atcaagtcggcgctcatgaccaccgcctac 147 |||||||| ||||| ||||||||||||||| Sbjct: 633 atcaagtctgcgctgatgaccaccgcctac 662
>dbj|D83672.1| Streptomyces albogriseolus DNA for subtilisin-like protease, complete cds Length = 3348 Score = 44.1 bits (22), Expect = 0.44 Identities = 31/34 (91%) Strand = Plus / Plus Query: 54 cccgcacgtcgccggcgtggccgcgctgctcaag 87 |||||||||||| |||| ||||||||||||||| Sbjct: 1321 cccgcacgtcgcgggcgccgccgcgctgctcaag 1354
>ref|NM_197437.1| Oryza sativa (japonica cultivar-group) putative serine protease (OSJNBa0096G08.24), mRNA Length = 2359 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 93 ccacccggactggagccctgcgcagatcaagtcggcgctcatgac 137 ||||||||||||| ||| ||| ||||||||||||| ||||||| Sbjct: 1683 ccacccggactggtcccccgcggcgatcaagtcggcgatcatgac 1727
>gb|AC078894.11| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0096G08 map E1363S, complete sequence Length = 140681 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Minus Query: 93 ccacccggactggagccctgcgcagatcaagtcggcgctcatgac 137 ||||||||||||| ||| ||| ||||||||||||| ||||||| Sbjct: 132350 ccacccggactggtcccccgcggcgatcaagtcggcgatcatgac 132306
>ref|XM_750754.1| Aspergillus fumigatus Af293 ABC multidrug transporter (Afu2g15130) partial mRNA Length = 4500 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 331 aagggcttcaccaagaactccaaca 355 |||| |||||||||||||||||||| Sbjct: 2994 aaggccttcaccaagaactccaaca 2970
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Minus Query: 93 ccacccggactggagccctgcgcagatcaagtcggcgctcatgac 137 ||||||||||||| ||| ||| ||||||||||||| ||||||| Sbjct: 19871312 ccacccggactggtcccccgcggcgatcaagtcggcgatcatgac 19871268
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 93 ccacccggactggagccctgcgcagatcaagtcggcgctcatgac 137 ||||||||||||| ||| ||| ||||||||||||| ||||||| Sbjct: 114731 ccacccggactggtcccccgcggcgatcaagtcggcgatcatgac 114775
>dbj|AK069238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012B10, full insert sequence Length = 2542 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 93 ccacccggactggagccctgcgcagatcaagtcggcgctcatgac 137 ||||||||||||| ||| ||| ||||||||||||| ||||||| Sbjct: 1701 ccacccggactggtcccccgcggcgatcaagtcggcgatcatgac 1745
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 56 cgcacgtcgccggcgtggccgcgctgctcaagg 88 ||||| |||| ||||||||||||||| |||||| Sbjct: 4305743 cgcacttcgcaggcgtggccgcgctggtcaagg 4305711
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 53 gcccgcacgtcgccggcgtggccgcgctg 81 ||||||||| ||||| ||||||||||||| Sbjct: 750101 gcccgcacgacgccgacgtggccgcgctg 750129
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Minus Query: 93 ccacccggactggagccctgcgcagatcaagtcggcgctcatgac 137 ||||||||||||| ||| ||| ||||||||||||| ||||||| Sbjct: 19882588 ccacccggactggtcccccgcggcgatcaagtcggcgatcatgac 19882544
>ref|NM_184492.1| Oryza sativa (japonica cultivar-group), mRNA Length = 525 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 443 tgacggtgcgccgcaccgtgacga 466 |||||||||||||| ||||||||| Sbjct: 408 tgacggtgcgccgctccgtgacga 431
>ref|XM_473380.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2511 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 123 gtcggcgctcatgaccaccgcctacgtc 150 ||||||| |||||||||||||| ||||| Sbjct: 1929 gtcggcgatcatgaccaccgccgacgtc 1956
>ref|XM_473476.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2283 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 117 gatcaagtcggcgctcatgaccaccgcc 144 |||||||||||| |||||||||||||| Sbjct: 1704 gatcaagtcggccatcatgaccaccgcc 1731
>gb|AY360387.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0003M24, complete sequence Length = 150085 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 cctaccacgtgctgaaggac 180 |||||||||||||||||||| Sbjct: 132253 cctaccacgtgctgaaggac 132272
>gb|AY644644.1| Oryza sativa (indica cultivar-group) meiotic serine proteinase-like protein (MSP) mRNA, complete cds Length = 2867 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 123 gtcggcgctcatgaccaccgcctacgtc 150 ||||||| |||||||||||||| ||||| Sbjct: 1943 gtcggcgatcatgaccaccgccgacgtc 1970
>gb|AY683198.1| Oryza sativa (indica cultivar-group) meiotic serine protease mRNA, partial cds Length = 2593 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 123 gtcggcgctcatgaccaccgcctacgtc 150 ||||||| |||||||||||||| ||||| Sbjct: 1863 gtcggcgatcatgaccaccgccgacgtc 1890
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 gctcaagggcttcaccaaga 346 |||||||||||||||||||| Sbjct: 5549184 gctcaagggcttcaccaaga 5549165 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 agctcaagggcttcaccaag 345 |||||||||||||||||||| Sbjct: 3636013 agctcaagggcttcaccaag 3636032
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 gctcaagggcttcaccaaga 346 |||||||||||||||||||| Sbjct: 5352351 gctcaagggcttcaccaaga 5352332 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 agctcaagggcttcaccaag 345 |||||||||||||||||||| Sbjct: 2559861 agctcaagggcttcaccaag 2559842
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome Length = 5178466 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 gccggcgtggccgcgctgct 83 |||||||||||||||||||| Sbjct: 4192417 gccggcgtggccgcgctgct 4192398
>gb|AY280669.1| Branchiostoma belcheri tsingtaunese cathepsin A (CTSA) mRNA, complete cds Length = 2682 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 tacgacattgggcagaacgagtac 288 ||||||||||||| |||||||||| Sbjct: 810 tacgacattgggctgaacgagtac 833
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 cgtcgccggcgtggccgcgc 79 |||||||||||||||||||| Sbjct: 1481862 cgtcgccggcgtggccgcgc 1481881
>emb|AL606682.3|OSJN00085 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065O17, complete sequence Length = 167269 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Minus Query: 117 gatcaagtcggcgctcatgaccaccgcc 144 |||||||||||| |||||||||||||| Sbjct: 138341 gatcaagtcggccatcatgaccaccgcc 138314
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 cgtcgccggcgtggccgcgc 79 |||||||||||||||||||| Sbjct: 268627 cgtcgccggcgtggccgcgc 268646
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 cgtcgccggcgtggccgcgc 79 |||||||||||||||||||| Sbjct: 1392068 cgtcgccggcgtggccgcgc 1392087
>gb|AE004575.1| Pseudomonas aeruginosa PAO1, section 136 of 529 of the complete genome Length = 10679 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 436 accccgctgacggtgcgccgcacc 459 |||||||||||| ||||||||||| Sbjct: 9588 accccgctgacgctgcgccgcacc 9565
>dbj|AP003209.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1189A09 Length = 167761 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 443 tgacggtgcgccgcaccgtgacga 466 |||||||||||||| ||||||||| Sbjct: 111370 tgacggtgcgccgctccgtgacga 111347
>dbj|AP006480.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone: B1052H09 Length = 190806 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 cctaccacgtgctgaaggac 180 |||||||||||||||||||| Sbjct: 187983 cctaccacgtgctgaaggac 187964
>dbj|AP006481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone: B1100F03 Length = 139217 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 cctaccacgtgctgaaggac 180 |||||||||||||||||||| Sbjct: 31523 cctaccacgtgctgaaggac 31504
>dbj|AK106823.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-E05, full insert sequence Length = 2831 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 123 gtcggcgctcatgaccaccgcctacgtc 150 ||||||| |||||||||||||| ||||| Sbjct: 1867 gtcggcgatcatgaccaccgccgacgtc 1894
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 327 gctcaagggcttcaccaaga 346 |||||||||||||||||||| Sbjct: 5431333 gctcaagggcttcaccaaga 5431314
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 ccgcacgtcgccggcgtggc 74 |||||||||||||||||||| Sbjct: 3338435 ccgcacgtcgccggcgtggc 3338416
>gb|AY818152.1| Nicotiana sylvestris clone NsN4R7 putative protein mRNA, partial cds Length = 369 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 tcggcgctcatgaccaccgc 143 |||||||||||||||||||| Sbjct: 213 tcggcgctcatgaccaccgc 232
>gb|AF052082.1|AF052082 Macaca fascicularis histo-blood group protein ABO gene (Cy*B101 allele), partial cds Length = 571 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 414 cgtcttcaccgatcagccggccac 437 |||||||||||| ||||||||||| Sbjct: 18 cgtcttcaccgaccagccggccac 41
>emb|AL606728.3|OSJN00102 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0038F03, complete sequence Length = 136656 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 123 gtcggcgctcatgaccaccgcctacgtc 150 ||||||| |||||||||||||| ||||| Sbjct: 29876 gtcggcgatcatgaccaccgccgacgtc 29903
>dbj|AP006380.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT01O24, TM0227, complete sequence Length = 84166 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 caacatgacatgcaagggca 370 |||||||||||||||||||| Sbjct: 9192 caacatgacatgcaagggca 9173
>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome Length = 2256640 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 agctcaagggcttcaccaag 345 |||||||||||||||||||| Sbjct: 2195600 agctcaagggcttcaccaag 2195619
>dbj|AB012767.1| Pseudomonas aeruginosa genes for CheZ, CheA, CheB, ORF1, ORF2, ORF3, ORF4 and CheW, complete cds Length = 10729 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 436 accccgctgacggtgcgccgcacc 459 |||||||||||| ||||||||||| Sbjct: 5987 accccgctgacgctgcgccgcacc 5964 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,960,236 Number of Sequences: 3902068 Number of extensions: 2960236 Number of successful extensions: 59806 Number of sequences better than 10.0: 114 Number of HSP's better than 10.0 without gapping: 128 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 56547 Number of HSP's gapped (non-prelim): 3241 length of query: 504 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 482 effective length of database: 17,147,199,772 effective search space: 8264950290104 effective search space used: 8264950290104 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
