ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast75d04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TOM20_SOLTU (P92792) Mitochondrial import receptor subunit TOM20... 111 7e-25
2TO203_ARATH (P82874) Mitochondrial import receptor subunit TOM20... 100 2e-21
3TO201_ARATH (P82872) Mitochondrial import receptor subunit TOM20... 99 5e-21
4TO202_ARATH (P82873) Mitochondrial import receptor subunit TOM20... 98 1e-20
5TO204_ARATH (P82805) Mitochondrial import receptor subunit TOM20... 97 1e-20
6SERC_ARATH (Q96255) Phosphoserine aminotransferase, chloroplast ... 33 0.44
7SEC_ARATH (Q9M8Y0) Probable UDP-N-acetylglucosamine--peptide N-a... 31 1.3
8SYT_CORGL (Q8NPZ0) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threon... 30 2.2
9US02_EHV1K (P32517) US1 protein 30 2.8
10L52_ADE02 (P03262) Late L1 52 kDa protein 29 6.3
11ROBO1_HUMAN (Q9Y6N7) Roundabout homolog 1 precursor (H-Robo-1) (... 28 8.2
12ZN221_HUMAN (Q9UK13) Zinc finger protein 221 28 8.2

>TOM20_SOLTU (P92792) Mitochondrial import receptor subunit TOM20 (Translocase|
           of outer membrane 20 kDa subunit)
          Length = 204

 Score =  111 bits (278), Expect = 7e-25
 Identities = 56/95 (58%), Positives = 68/95 (71%)
 Frame = +1

Query: 169 ERLFFFDLACKTAKATYDENPLDADNLTRWGGALLELSQMHNGPESLKCLEDAESKLDEA 348
           +RL FF+ A K+A+ TY +NPLDADNLTRWGGALLELSQ     ES + + DA SKL+EA
Sbjct: 8   DRLLFFEHARKSAETTYAQNPLDADNLTRWGGALLELSQFQPVAESKQMISDATSKLEEA 67

Query: 349 LRIDPNKADALWCLGNALTSRGFFTSETVQANECF 453
           L ++P K DALWCLGNA TS  F T +  +A   F
Sbjct: 68  LTVNPEKHDALWCLGNAHTSHVFLTPDMDEAKVYF 102



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>TO203_ARATH (P82874) Mitochondrial import receptor subunit TOM20-3 (Translocase|
           of outer membrane 20 kDa subunit 3)
          Length = 202

 Score =  100 bits (248), Expect = 2e-21
 Identities = 46/95 (48%), Positives = 65/95 (68%)
 Frame = +1

Query: 169 ERLFFFDLACKTAKATYDENPLDADNLTRWGGALLELSQMHNGPESLKCLEDAESKLDEA 348
           +R+  F+   + A+ TY  NPLDADNLTRWGG LLELSQ H+  ++ + +++A +K +EA
Sbjct: 8   DRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEA 67

Query: 349 LRIDPNKADALWCLGNALTSRGFFTSETVQANECF 453
           L IDP K +A+WC+GNA TS  F T +  +A   F
Sbjct: 68  LLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNF 102



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>TO201_ARATH (P82872) Mitochondrial import receptor subunit TOM20-1 (Translocase|
           of outer membrane 20 kDa subunit 1)
          Length = 188

 Score = 99.0 bits (245), Expect = 5e-21
 Identities = 51/91 (56%), Positives = 63/91 (69%)
 Frame = +1

Query: 169 ERLFFFDLACKTAKATYDENPLDADNLTRWGGALLELSQMHNGPESLKCLEDAESKLDEA 348
           ++L FF+   K A+ TY  NP DADNL RWG ALLELSQ  N  +SLK ++DA SKL++A
Sbjct: 2   DKLNFFEEIRKDAEETYKLNPEDADNLMRWGEALLELSQFQNVIDSLKMIQDAISKLEDA 61

Query: 349 LRIDPNKADALWCLGNALTSRGFFTSETVQA 441
           + IDP K DA+WCLGNA TS    T +  QA
Sbjct: 62  ILIDPMKHDAVWCLGNAYTSYARLTPDDTQA 92



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>TO202_ARATH (P82873) Mitochondrial import receptor subunit TOM20-2 (Translocase|
           of outer membrane 20 kDa subunit 2)
          Length = 210

 Score = 97.8 bits (242), Expect = 1e-20
 Identities = 48/95 (50%), Positives = 63/95 (66%)
 Frame = +1

Query: 169 ERLFFFDLACKTAKATYDENPLDADNLTRWGGALLELSQMHNGPESLKCLEDAESKLDEA 348
           ERL  F+ A K ++A Y  +PLD++NL +WGGALLELSQ    PE+   L DA SKL+EA
Sbjct: 9   ERLIMFEHARKNSEAQYKNDPLDSENLLKWGGALLELSQFQPIPEAKLMLNDAISKLEEA 68

Query: 349 LRIDPNKADALWCLGNALTSRGFFTSETVQANECF 453
           L I+P K  ALWC+ NA T+  F+  +  +A E F
Sbjct: 69  LTINPGKHQALWCIANAYTAHAFYVHDPEEAKEHF 103



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>TO204_ARATH (P82805) Mitochondrial import receptor subunit TOM20-4 (Translocase|
           of outer membrane 20 kDa subunit 4)
          Length = 187

 Score = 97.4 bits (241), Expect = 1e-20
 Identities = 52/95 (54%), Positives = 66/95 (69%)
 Frame = +1

Query: 169 ERLFFFDLACKTAKATYDENPLDADNLTRWGGALLELSQMHNGPESLKCLEDAESKLDEA 348
           ERL  F+ A K A+ATY +NPLDA+NLTRW GALLELSQ    P+ +  + +A  KL EA
Sbjct: 8   ERLMVFEHARKVAEATYVKNPLDAENLTRWAGALLELSQFQTEPKQM--ILEAILKLGEA 65

Query: 349 LRIDPNKADALWCLGNALTSRGFFTSETVQANECF 453
           L IDP K DALW +GNA  S GF +S+  +A++ F
Sbjct: 66  LVIDPKKHDALWLIGNAHLSFGFLSSDQTEASDNF 100



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>SERC_ARATH (Q96255) Phosphoserine aminotransferase, chloroplast precursor (EC|
           2.6.1.52) (PSAT)
          Length = 430

 Score = 32.7 bits (73), Expect = 0.44
 Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
 Frame = +1

Query: 169 ERLFFFDLACKTAKATYDENPL---DADNLTRWGGALLELSQM-HNGPESLKCLEDAESK 336
           ER+F F        AT  EN L    AD L  W G+ + + +M H G E L  ++ AES 
Sbjct: 71  ERVFNF----AAGPATLPENVLLKAQAD-LYNWRGSGMSVMEMSHRGKEFLSIIQKAESD 125

Query: 337 LDEALRIDPNKADALWCLGNALT 405
           L + L I P +   L+  G A T
Sbjct: 126 LRQLLEI-PQEYSVLFLQGGATT 147



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>SEC_ARATH (Q9M8Y0) Probable UDP-N-acetylglucosamine--peptide|
           N-acetylglucosaminyltransferase SEC (EC 2.4.1.-)
           (Protein SECRET AGENT)
          Length = 977

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 22/77 (28%), Positives = 33/77 (42%)
 Frame = +1

Query: 184 FDLACKTAKATYDENPLDADNLTRWGGALLELSQMHNGPESLKCLEDAESKLDEALRIDP 363
           F  A + +   Y  NPL  DNL   G    +L +         C+    ++ +EALRI P
Sbjct: 69  FKQALEHSNMVYQRNPLRTDNLLLIGAIYYQLQEYD------MCI----ARNEEALRIQP 118

Query: 364 NKADALWCLGNALTSRG 414
             A+    + NA   +G
Sbjct: 119 QFAECYGNMANAWKEKG 135



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>SYT_CORGL (Q8NPZ0) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA|
           ligase) (ThrRS)
          Length = 695

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 250 TRWGGALLELSQMHNGPESLKCLEDAESKLDEALRIDPNKA 372
           T  G A+ EL   + GPE++ C +DAE +L +   +    A
Sbjct: 29  TAIGAAMRELDLPNKGPEAIVCAKDAEGQLKDLSHVPETTA 69



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>US02_EHV1K (P32517) US1 protein|
          Length = 303

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = +3

Query: 165 PGEALLLRPRLQDRQGHLRREPARRRQPDAMGRRSAGAVADA*RPGEPQVP--RRCG 329
           PG  L   PR +  +G +R    R R P     RS  A A   RPG+P+ P  RR G
Sbjct: 233 PGRPL---PRRRPSEGGMRAPRRRSRAPAPA--RSTAAAATPPRPGDPRAPAARRAG 284



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>L52_ADE02 (P03262) Late L1 52 kDa protein|
          Length = 415

 Score = 28.9 bits (63), Expect = 6.3
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +3

Query: 183 LRPRLQDRQGHLRREPARRRQPDAMGRRSAGAVADA*RPGEPQVPRR 323
           +RP  Q RQ   +R+  R   P       A + ADA   G+ + PRR
Sbjct: 8   MRPPPQQRQEQEQRQTCRAPSPSPTASGGATSAADAAADGDYEPPRR 54



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>ROBO1_HUMAN (Q9Y6N7) Roundabout homolog 1 precursor (H-Robo-1) (Deleted in U|
            twenty twenty)
          Length = 1651

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 13/25 (52%), Positives = 17/25 (68%), Gaps = 3/25 (12%)
 Frame = +3

Query: 183  LRPRLQD---RQGHLRREPARRRQP 248
            L+P LQD     GH++ +P RRRQP
Sbjct: 1271 LQPMLQDCPEETGHMQHQPDRRRQP 1295



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>ZN221_HUMAN (Q9UK13) Zinc finger protein 221|
          Length = 617

 Score = 28.5 bits (62), Expect = 8.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +1

Query: 253 RWGGALLELSQMHNGPESLKCLE 321
           RW   LL   Q+H+G +S KC E
Sbjct: 404 RWSSCLLNHQQVHSGQKSFKCEE 426


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,362,358
Number of Sequences: 219361
Number of extensions: 752496
Number of successful extensions: 2668
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2667
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2793557952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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