ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast75c09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|Y18625.1|TAE18625 Triticum aestivum mRNA for amylogenin 714 0.0
2dbj|AK104316.1| Oryza sativa (japonica cultivar-group) cDNA clon... 375 e-101
3dbj|AK071012.1| Oryza sativa (japonica cultivar-group) cDNA clon... 359 5e-96
4dbj|AK058644.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 3e-63
5emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4,... 159 9e-36
6gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence 159 9e-36
7dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 159 9e-36
8emb|AJ011079.1|OSP011079 Oryza sativa mRNA for RGP2 protein, par... 159 9e-36
9emb|Y18623.1|OSA18623 Oryza sativa mRNA for amylogenin 159 9e-36
10ref|XM_474209.1| Oryza sativa (japonica cultivar-group), predic... 153 5e-34
11ref|NM_188485.1| Oryza sativa (japonica cultivar-group), predic... 44 0.36
12dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
13dbj|AP002745.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
14dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.36
15dbj|AK108579.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.36
16emb|AL390732.10| Human DNA sequence from clone RP11-439N12 on ch... 42 1.4
17emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 42 1.4
18ref|XM_954336.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.6
19ref|XM_330989.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.6
20ref|XM_659210.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 5.6
21gb|AF402990.1| Uncultured archaeon clone archaeap28 16S ribosoma... 40 5.6
22gb|AC122316.3| Mus musculus BAC clone RP23-303G23 from 1, comple... 40 5.6
23gb|AC138228.10| Mus musculus chromosome 17, clone RP23-304G12, c... 40 5.6
24gb|AC092536.3| Homo sapiens BAC clone RP11-32N3 from 7, complete... 40 5.6
25emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete ... 40 5.6
26gb|AC156608.10| Mus musculus chromosome 8, clone RP23-303A11, co... 40 5.6
27gb|AC099727.13| Mus musculus chromosome 1, clone RP23-353O3, com... 40 5.6
28gb|AC183495.1| Brassica oleracea Contig A, complete sequence 40 5.6
29gb|AC126033.4| Mus musculus BAC clone RP24-115A22 from chromosom... 40 5.6
30gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 5.6
31dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
32dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.6
33gb|AC023732.5| Drosophila melanogaster X BAC RP98-42M11 (Roswell... 40 5.6
34gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 5.6
35dbj|AP003527.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
36dbj|AK105826.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
37gb|AE003449.2| Drosophila melanogaster chromosome X, section 33 ... 40 5.6
38gb|AC175246.2| Mus musculus chromosome 1, clone wi1-1101A21, com... 40 5.6
39gb|U97686.1|BTMANB1 Bos taurus lysosomal alpha-mannosidase (ManB... 40 5.6
40emb|AL592433.12| Mouse DNA sequence from clone RP23-445F7 on chr... 40 5.6 
>emb|Y18625.1|TAE18625 Triticum aestivum mRNA for amylogenin
          Length = 1903

 Score =  714 bits (360), Expect = 0.0
 Identities = 402/416 (96%)
 Strand = Plus / Plus

                                                                       
Query: 5   ccgcccccaccctgctcgccctcaccctcgacgccgcgctcctccgcatcgccaccctcc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ccgcccccaccctgctcgccctcaccctcgacgccgcgctcctccgcatcgccaccctcc 322

                                                                       
Query: 65  gcgacctctcccgcctccccgaccacatcctattcgacctcttccgcagaacccttagtg 124
           |||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||
Sbjct: 323 gcgacctctcccgcctccccgaccacatcctcgtcgacctcttccgcagaacacttagtg 382

                                                                       
Query: 125 ctggtaagctgacagagaaagtcctcaagctatttctggcaaccgactgtgaggagatca 184
           |||||||||||||||||| |||||||||| | ||||||||||||||||| ||||||||||
Sbjct: 383 ctggtaagctgacagagagagtcctcaagttgtttctggcaaccgactgcgaggagatca 442

                                                                       
Query: 185 tcttgcttgttcagctcctcaacattaagcagccacttataccggtccttcccgcgaggt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||
Sbjct: 443 tcttgcttgttcagctcctcaacattaagcagccacttataccggtccttcctacgaggt 502

                                                                       
Query: 245 gctctgagaagttctagtactgctgctgcttagatcaggctgattagctgtgaagatgtc 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gctctgagaagttctagtactgctgctgcttagatcaggctgattagctgtgaagatgtc 562

                                                                       
Query: 305 tttggaagttcaggacagcgaggttgacattgtgattgcagcactccagcccaacctgac 364
           |||||| ||||| || ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 563 tttggaggttcacgatagcgaggttgacattgtgattgcagcactacagcccaacctgac 622

                                                                   
Query: 365 ctctttctttcaggcgtggcagccatttttctcccggttcgacatcattgttgtca 420
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 623 ctctttctttcaggcgtggcagccatttttctcccggtttgacatcattgttgtca 678
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>dbj|AK104316.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-023-H07, full
           insert sequence
          Length = 1616

 Score =  375 bits (189), Expect = e-101
 Identities = 361/416 (86%), Gaps = 3/416 (0%)
 Strand = Plus / Plus

                                                                       
Query: 8   cccccaccctgctcgccctcaccctcgacgccgcgctcctccgcatcgccaccctccgcg 67
           ||||| |||||||| |||||||||||||| ||||||||||||||||||||  ||||| ||
Sbjct: 102 ccccctccctgctctccctcaccctcgactccgcgctcctccgcatcgcccacctccacg 161

                                                                       
Query: 68  acctctcccgcctccccgaccacatcctattcgacctcttccgcagaacccttagtgctg 127
           ||||||||||||||||||||||| ||||  ||||||||||||| |||||  |   ||| |
Sbjct: 162 acctctcccgcctccccgaccacctcctcatcgacctcttccgtagaactatagctgccg 221

                                                                       
Query: 128 gtaagctgacagagaaagtcctcaagctatttctggcaaccgactgtgaggagatcatct 187
           ||||||||||||| |||||||| ||| | ||||||||||| || || ||||| |||  ||
Sbjct: 222 gtaagctgacagaaaaagtcctgaagttgtttctggcaacggattgcgaggaaatcgcct 281

                                                                       
Query: 188 tgcttgttcagctcctcaacattaagcagccacttataccggtccttcccgcgaggtgct 247
           ||||||||||| | ||||||||||||||||| ||| |||||||||||||| |||||||||
Sbjct: 282 tgcttgttcagttgctcaacattaagcagccgcttgtaccggtccttcccacgaggtgct 341

                                                                       
Query: 248 ctgagaagttctagtactgctgctgcttagatcaggc-tgattagctgtg--aagatgtc 304
           |||||||||||||| | ||  |||| |||| |||| | || ||| ||| |  ||||||||
Sbjct: 342 ctgagaagttctagaagtgacgctgattaggtcagtcttggttacctgagaaaagatgtc 401

                                                                       
Query: 305 tttggaagttcaggacagcgaggttgacattgtgattgcagcactccagcccaacctgac 364
           ||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 402 tttggaaattcaggacagtgaggtcgacattgtgattgcagcactccagcccaacctgac 461

                                                                   
Query: 365 ctctttctttcaggcgtggcagccatttttctcccggttcgacatcattgttgtca 420
             |||||||| |||| |||  |||||||||||| |||||| |||||||||||||||
Sbjct: 462 tactttctttgaggcatggaggccatttttctctcggttccacatcattgttgtca 517
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>dbj|AK071012.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079O10, full
           insert sequence
          Length = 1745

 Score =  359 bits (181), Expect = 5e-96
 Identities = 359/416 (86%), Gaps = 3/416 (0%)
 Strand = Plus / Plus

                                                                       
Query: 8   cccccaccctgctcgccctcaccctcgacgccgcgctcctccgcatcgccaccctccgcg 67
           ||||| |||||||| |||||||||||||| ||||||||||||||||||||  ||||| ||
Sbjct: 186 ccccctccctgctctccctcaccctcgactccgcgctcctccgcatcgcccacctccacg 245

                                                                       
Query: 68  acctctcccgcctccccgaccacatcctattcgacctcttccgcagaacccttagtgctg 127
           ||||||||||||||||||||||| ||||  ||||||||||||| |||||  |   ||| |
Sbjct: 246 acctctcccgcctccccgaccacctcctcatcgacctcttccgtagaactatagctgccg 305

                                                                       
Query: 128 gtaagctgacagagaaagtcctcaagctatttctggcaaccgactgtgaggagatcatct 187
           ||||||||||||  |||||||| ||| | ||||||||||| || || ||||| |||  ||
Sbjct: 306 gtaagctgacaggaaaagtcctgaagttgtttctggcaacggattgcgaggaaatcgcct 365

                                                                       
Query: 188 tgcttgttcagctcctcaacattaagcagccacttataccggtccttcccgcgaggtgct 247
           ||||||||||| | ||||||||||||||||| ||| |||||||||||||| |||||||||
Sbjct: 366 tgcttgttcagttgctcaacattaagcagccgcttgtaccggtccttcccacgaggtgct 425

                                                                       
Query: 248 ctgagaagttctagtactgctgctgcttagatcaggc-tgattagctgtg--aagatgtc 304
           |||||||||||||| | ||   ||| |||| |||| | || ||| ||| |  ||||||||
Sbjct: 426 ctgagaagttctagaagtgacactgattaggtcagtcttggttacctgagaaaagatgtc 485

                                                                       
Query: 305 tttggaagttcaggacagcgaggttgacattgtgattgcagcactccagcccaacctgac 364
           ||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 486 tttggaaattcaggacagtgaggtcgacattgtgattgcagcactccagcccaacctgac 545

                                                                   
Query: 365 ctctttctttcaggcgtggcagccatttttctcccggttcgacatcattgttgtca 420
             |||||||| |||| |||  |||||||||||| |||||| |||||||||||||||
Sbjct: 546 tactttctttgaggcatggaggccatttttctctcggttccacatcattgttgtca 601
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>dbj|AK058644.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-E07, full
           insert sequence
          Length = 1422

 Score =  250 bits (126), Expect = 3e-63
 Identities = 256/297 (86%), Gaps = 3/297 (1%)
 Strand = Plus / Plus

                                                                       
Query: 127 ggtaagctgacagagaaagtcctcaagctatttctggcaaccgactgtgaggagatcatc 186
           |||||||||||||| |||||||| ||| | ||||||||||| || || ||||| |||  |
Sbjct: 27  ggtaagctgacagaaaaagtcctgaagttgtttctggcaacggattgcgaggaaatcgcc 86

                                                                       
Query: 187 ttgcttgttcagctcctcaacattaagcagccacttataccggtccttcccgcgaggtgc 246
           |||||||||||| | ||||||||||||||||| ||| |||||||||||||| ||||||||
Sbjct: 87  ttgcttgttcagttgctcaacattaagcagccgcttgtaccggtccttcccacgaggtgc 146

                                                                       
Query: 247 tctgagaagttctagtactgctgctgcttagatcaggct-gattagctgtgaa--gatgt 303
           |||||| |||||||| | ||   ||| |||| |||| || | ||| ||| |||  |||||
Sbjct: 147 tctgaggagttctagaagtgacactgattaggtcagtcttggttacctgagaaaagatgt 206

                                                                       
Query: 304 ctttggaagttcaggacagcgaggttgacattgtgattgcagcactccagcccaacctga 363
           |||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 207 ctttggaaattcaggacagtgaggtcgacattgtgattgcagcactccagcccaacctga 266

                                                                    
Query: 364 cctctttctttcaggcgtggcagccatttttctcccggttcgacatcattgttgtca 420
           |  |||||||| |||| |||  |||||||||||| |||||| |||||||||||||||
Sbjct: 267 ctactttctttgaggcatggaggccatttttctctcggttccacatcattgttgtca 323
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>emb|AL606608.3|OSJN00056 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0015K02,
             complete sequence
          Length = 153623

 Score =  159 bits (80), Expect = 9e-36
 Identities = 113/124 (91%)
 Strand = Plus / Plus

                                                                         
Query: 297   aagatgtctttggaagttcaggacagcgaggttgacattgtgattgcagcactccagccc 356
             ||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 90210 aagatgtctttggaaattcaggacagtgaggtcgacattgtgattgcagcactccagccc 90269

                                                                         
Query: 357   aacctgacctctttctttcaggcgtggcagccatttttctcccggttcgacatcattgtt 416
             ||||||||  |||||||| |||| |||  |||||||||||| |||||| |||||||||||
Sbjct: 90270 aacctgactactttctttgaggcatggaggccatttttctctcggttccacatcattgtt 90329

                 
Query: 417   gtca 420
             ||||
Sbjct: 90330 gtca 90333



 Score =  133 bits (67), Expect = 5e-28
 Identities = 94/103 (91%)
 Strand = Plus / Plus

                                                                         
Query: 8     cccccaccctgctcgccctcaccctcgacgccgcgctcctccgcatcgccaccctccgcg 67
             ||||| |||||||| |||||||||||||| ||||||||||||||||||||  ||||| ||
Sbjct: 89307 ccccctccctgctctccctcaccctcgactccgcgctcctccgcatcgcccacctccacg 89366

                                                        
Query: 68    acctctcccgcctccccgaccacatcctattcgacctcttccg 110
             ||||||||||||||||||||||| ||||  |||||||||||||
Sbjct: 89367 acctctcccgcctccccgaccacctcctcatcgacctcttccg 89409



 Score =  111 bits (56), Expect = 2e-21
 Identities = 101/116 (87%)
 Strand = Plus / Plus

                                                                         
Query: 127   ggtaagctgacagagaaagtcctcaagctatttctggcaaccgactgtgaggagatcatc 186
             |||||||||||||| |||||||| ||| | ||||||||||| || || ||||| |||  |
Sbjct: 89942 ggtaagctgacagaaaaagtcctgaagttgtttctggcaacggattgcgaggaaatcgcc 90001

                                                                     
Query: 187   ttgcttgttcagctcctcaacattaagcagccacttataccggtccttcccgcgag 242
             |||||||||||| | ||||||||||||||||| ||| |||||||||||||| ||||
Sbjct: 90002 ttgcttgttcagttgctcaacattaagcagccgcttgtaccggtccttcccacgag 90057
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>gb|AF480497.1| Oryza sativa clone BAC 24K23, complete sequence
          Length = 181577

 Score =  159 bits (80), Expect = 9e-36
 Identities = 113/124 (91%)
 Strand = Plus / Plus

                                                                          
Query: 297    aagatgtctttggaagttcaggacagcgaggttgacattgtgattgcagcactccagccc 356
              ||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 170954 aagatgtctttggaaattcaggacagtgaggtcgacattgtgattgcagcactccagccc 171013

                                                                          
Query: 357    aacctgacctctttctttcaggcgtggcagccatttttctcccggttcgacatcattgtt 416
              ||||||||  |||||||| |||| |||  |||||||||||| |||||| |||||||||||
Sbjct: 171014 aacctgactactttctttgaggcatggaggccatttttctctcggttccacatcattgtt 171073

                  
Query: 417    gtca 420
              ||||
Sbjct: 171074 gtca 171077



 Score =  133 bits (67), Expect = 5e-28
 Identities = 94/103 (91%)
 Strand = Plus / Plus

                                                                          
Query: 8      cccccaccctgctcgccctcaccctcgacgccgcgctcctccgcatcgccaccctccgcg 67
              ||||| |||||||| |||||||||||||| ||||||||||||||||||||  ||||| ||
Sbjct: 170051 ccccctccctgctctccctcaccctcgactccgcgctcctccgcatcgcccacctccacg 170110

                                                         
Query: 68     acctctcccgcctccccgaccacatcctattcgacctcttccg 110
              ||||||||||||||||||||||| ||||  |||||||||||||
Sbjct: 170111 acctctcccgcctccccgaccacctcctcatcgacctcttccg 170153



 Score =  111 bits (56), Expect = 2e-21
 Identities = 101/116 (87%)
 Strand = Plus / Plus

                                                                          
Query: 127    ggtaagctgacagagaaagtcctcaagctatttctggcaaccgactgtgaggagatcatc 186
              |||||||||||||| |||||||| ||| | ||||||||||| || || ||||| |||  |
Sbjct: 170686 ggtaagctgacagaaaaagtcctgaagttgtttctggcaacggattgcgaggaaatcgcc 170745

                                                                      
Query: 187    ttgcttgttcagctcctcaacattaagcagccacttataccggtccttcccgcgag 242
              |||||||||||| | ||||||||||||||||| ||| |||||||||||||| ||||
Sbjct: 170746 ttgcttgttcagttgctcaacattaagcagccgcttgtaccggtccttcccacgag 170801
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  159 bits (80), Expect = 9e-36
 Identities = 113/124 (91%)
 Strand = Plus / Plus

                                                                            
Query: 297      aagatgtctttggaagttcaggacagcgaggttgacattgtgattgcagcactccagccc 356
                ||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 33739767 aagatgtctttggaaattcaggacagtgaggtcgacattgtgattgcagcactccagccc 33739826

                                                                            
Query: 357      aacctgacctctttctttcaggcgtggcagccatttttctcccggttcgacatcattgtt 416
                ||||||||  |||||||| |||| |||  |||||||||||| |||||| |||||||||||
Sbjct: 33739827 aacctgactactttctttgaggcatggaggccatttttctctcggttccacatcattgtt 33739886

                    
Query: 417      gtca 420
                ||||
Sbjct: 33739887 gtca 33739890



 Score =  133 bits (67), Expect = 5e-28
 Identities = 94/103 (91%)
 Strand = Plus / Plus

                                                                            
Query: 8        cccccaccctgctcgccctcaccctcgacgccgcgctcctccgcatcgccaccctccgcg 67
                ||||| |||||||| |||||||||||||| ||||||||||||||||||||  ||||| ||
Sbjct: 33738864 ccccctccctgctctccctcaccctcgactccgcgctcctccgcatcgcccacctccacg 33738923

                                                           
Query: 68       acctctcccgcctccccgaccacatcctattcgacctcttccg 110
                ||||||||||||||||||||||| ||||  |||||||||||||
Sbjct: 33738924 acctctcccgcctccccgaccacctcctcatcgacctcttccg 33738966



 Score =  111 bits (56), Expect = 2e-21
 Identities = 101/116 (87%)
 Strand = Plus / Plus

                                                                            
Query: 127      ggtaagctgacagagaaagtcctcaagctatttctggcaaccgactgtgaggagatcatc 186
                |||||||||||||| |||||||| ||| | ||||||||||| || || ||||| |||  |
Sbjct: 33739499 ggtaagctgacagaaaaagtcctgaagttgtttctggcaacggattgcgaggaaatcgcc 33739558

                                                                        
Query: 187      ttgcttgttcagctcctcaacattaagcagccacttataccggtccttcccgcgag 242
                |||||||||||| | ||||||||||||||||| ||| |||||||||||||| ||||
Sbjct: 33739559 ttgcttgttcagttgctcaacattaagcagccgcttgtaccggtccttcccacgag 33739614
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>emb|AJ011079.1|OSP011079 Oryza sativa mRNA for RGP2 protein, partial
          Length = 1238

 Score =  159 bits (80), Expect = 9e-36
 Identities = 113/124 (91%)
 Strand = Plus / Plus

                                                                       
Query: 297 aagatgtctttggaagttcaggacagcgaggttgacattgtgattgcagcactccagccc 356
           ||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 6   aagatgtctttggaaattcaggacagtgaggtcgacattgtgattgcagcactccagccc 65

                                                                       
Query: 357 aacctgacctctttctttcaggcgtggcagccatttttctcccggttcgacatcattgtt 416
           ||||||||  |||||||| |||| |||  |||||||||||| |||||| |||||||||||
Sbjct: 66  aacctgactactttctttgaggcatggaggccatttttctctcggttccacatcattgtt 125

               
Query: 417 gtca 420
           ||||
Sbjct: 126 gtca 129
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>emb|Y18623.1|OSA18623 Oryza sativa mRNA for amylogenin
          Length = 1157

 Score =  159 bits (80), Expect = 9e-36
 Identities = 113/124 (91%)
 Strand = Plus / Plus

                                                                       
Query: 297 aagatgtctttggaagttcaggacagcgaggttgacattgtgattgcagcactccagccc 356
           ||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||
Sbjct: 12  aagatgtctttggaaattcaggacagtgaggtcgacattgtgattgcagcactccagccc 71

                                                                       
Query: 357 aacctgacctctttctttcaggcgtggcagccatttttctcccggttcgacatcattgtt 416
           ||||||||  |||||||| |||| |||  |||||||||||| |||||| |||||||||||
Sbjct: 72  aacctgactactttctttgaggcatggaggccatttttctctcggttccacatcattgtt 131

               
Query: 417 gtca 420
           ||||
Sbjct: 132 gtca 135
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>ref|XM_474209.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1044

 Score =  153 bits (77), Expect = 5e-34
 Identities = 110/121 (90%)
 Strand = Plus / Plus

                                                                       
Query: 300 atgtctttggaagttcaggacagcgaggttgacattgtgattgcagcactccagcccaac 359
           |||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 1   atgtctttggaaattcaggacagtgaggtcgacattgtgattgcagcactccagcccaac 60

                                                                       
Query: 360 ctgacctctttctttcaggcgtggcagccatttttctcccggttcgacatcattgttgtc 419
           |||||  |||||||| |||| |||  |||||||||||| |||||| ||||||||||||||
Sbjct: 61  ctgactactttctttgaggcatggaggccatttttctctcggttccacatcattgttgtc 120

            
Query: 420 a 420
           |
Sbjct: 121 a 121
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>ref|NM_188485.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1104

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 60  cctccgcgacctctcccgcctccccg 85
           ||||||||||||||||| ||||||||
Sbjct: 447 cctccgcgacctctccctcctccccg 472
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 60      cctccgcgacctctcccgcctccccg 85
               ||||||||||||||||| ||||||||
Sbjct: 6529406 cctccgcgacctctccctcctccccg 6529431
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>dbj|AP002745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0489G09
          Length = 148707

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 60    cctccgcgacctctcccgcctccccg 85
             ||||||||||||||||| ||||||||
Sbjct: 96886 cctccgcgacctctccctcctccccg 96911
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>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0483F08
          Length = 148985

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 60   cctccgcgacctctcccgcctccccg 85
            ||||||||||||||||| ||||||||
Sbjct: 9577 cctccgcgacctctccctcctccccg 9602
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>dbj|AK108579.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-H02, full
           insert sequence
          Length = 1397

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 60  cctccgcgacctctcccgcctccccg 85
           ||||||||||||||||| ||||||||
Sbjct: 549 cctccgcgacctctccctcctccccg 574
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>emb|AL390732.10| Human DNA sequence from clone RP11-439N12 on chromosome 9 Contains a
             novel gene similar to mouse 9130404H11Rik protein, the
             CER1 gene for cerberus 1 homolog, cysteine knot
             superfamily (Xenopus laevis) and the 3' end of a novel
             gene (FLJ25416), complete sequence
          Length = 143246

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 335   tgtgattgcagcactccagcc 355
             |||||||||||||||||||||
Sbjct: 93171 tgtgattgcagcactccagcc 93151
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 4       accgcccccaccctgctcgccctcaccct 32
               ||||||||| |||||||||||||| ||||
Sbjct: 4860431 accgcccccgccctgctcgccctcgccct 4860459
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>ref|XM_954336.1| Neurospora crassa OR74A hypothetical protein (NCU02214.1) partial
           mRNA
          Length = 3057

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 15  cctgctcgccctcaccctcg 34
           ||||||||||||||||||||
Sbjct: 219 cctgctcgccctcaccctcg 200
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>ref|XM_330989.1| Neurospora crassa OR74A hypothetical protein (NCU02214.1) partial
           mRNA
          Length = 3057

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 15  cctgctcgccctcaccctcg 34
           ||||||||||||||||||||
Sbjct: 219 cctgctcgccctcaccctcg 200
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>ref|XM_659210.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN6698.2), mRNA
          Length = 1209

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 16   ctgctcgccctcaccctcga 35
            ||||||||||||||||||||
Sbjct: 1017 ctgctcgccctcaccctcga 998
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>gb|AF402990.1| Uncultured archaeon clone archaeap28 16S ribosomal RNA gene,
           partial sequence
          Length = 1018

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 63  ccgcgacctctcccgcctcc 82
           ||||||||||||||||||||
Sbjct: 272 ccgcgacctctcccgcctcc 253
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>gb|AC122316.3| Mus musculus BAC clone RP23-303G23 from 1, complete sequence
          Length = 171213

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 290   agctgtgaagatgtctttggaagt 313
             ||||||||||||| ||||||||||
Sbjct: 58889 agctgtgaagatggctttggaagt 58912
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>gb|AC138228.10| Mus musculus chromosome 17, clone RP23-304G12, complete sequence
          Length = 225739

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 122   gtgctggtaagctgacagag 141
             ||||||||||||||||||||
Sbjct: 96176 gtgctggtaagctgacagag 96157
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>gb|AC092536.3| Homo sapiens BAC clone RP11-32N3 from 7, complete sequence
          Length = 132755

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 301    tgtctttggaagttcaggacagcgaggt 328
              ||||| |||||||||||||||| |||||
Sbjct: 107250 tgtctgtggaagttcaggacagtgaggt 107223
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>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29
          Length = 290850

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      gcaccgcccccaccctgctc 21
              ||||||||||||||||||||
Sbjct: 269680 gcaccgcccccaccctgctc 269699
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>gb|AC156608.10| Mus musculus chromosome 8, clone RP23-303A11, complete sequence
          Length = 229633

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 256   ttctagtactgctgctgctt 275
             ||||||||||||||||||||
Sbjct: 38600 ttctagtactgctgctgctt 38619
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>gb|AC099727.13| Mus musculus chromosome 1, clone RP23-353O3, complete sequence
          Length = 222408

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 290   agctgtgaagatgtctttggaagt 313
             ||||||||||||| ||||||||||
Sbjct: 31780 agctgtgaagatggctttggaagt 31803
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>gb|AC183495.1| Brassica oleracea Contig A, complete sequence
          Length = 356505

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   atcttgcttgttcagctcct 203
             ||||||||||||||||||||
Sbjct: 76364 atcttgcttgttcagctcct 76345
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>gb|AC126033.4| Mus musculus BAC clone RP24-115A22 from chromosome 14, complete
             sequence
          Length = 154626

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   cttgcttgttcagctcctca 205
             ||||||||||||||||||||
Sbjct: 43643 cttgcttgttcagctcctca 43624
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 47     tccgcatcgccaccctccgc 66
              ||||||||||||||||||||
Sbjct: 889909 tccgcatcgccaccctccgc 889928
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 29       ccctcgacgccgcgctcctc 48
                ||||||||||||||||||||
Sbjct: 17605591 ccctcgacgccgcgctcctc 17605572
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 35      acgccgcgctcctccgcatc 54
               ||||||||||||||||||||
Sbjct: 3497401 acgccgcgctcctccgcatc 3497382
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>gb|AC023732.5| Drosophila melanogaster X BAC RP98-42M11 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 177820

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 381   tggcagccatttttctcccg 400
             ||||||||||||||||||||
Sbjct: 92349 tggcagccatttttctcccg 92330
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 21      cgccctcaccctcgacgccgcgctcctc 48
               ||||||| |||||| |||||||||||||
Sbjct: 1558943 cgccctcgccctcgccgccgcgctcctc 1558916
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>dbj|AP003527.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0564B04
          Length = 64684

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    ccctcgacgccgcgctcctc 48
             ||||||||||||||||||||
Sbjct: 31939 ccctcgacgccgcgctcctc 31920
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>dbj|AK105826.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E02, full
           insert sequence
          Length = 1793

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 29  ccctcgacgccgcgctcctc 48
           ||||||||||||||||||||
Sbjct: 455 ccctcgacgccgcgctcctc 474
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>gb|AE003449.2| Drosophila melanogaster chromosome X, section 33 of 74 of the complete
             sequence
          Length = 307201

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 381   tggcagccatttttctcccg 400
             ||||||||||||||||||||
Sbjct: 10626 tggcagccatttttctcccg 10607
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>gb|AC175246.2| Mus musculus chromosome 1, clone wi1-1101A21, complete sequence
          Length = 40682

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 295  tgaagatgtctttggaagttcagg 318
            |||||||||||||| |||||||||
Sbjct: 1052 tgaagatgtctttgaaagttcagg 1075
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>gb|U97686.1|BTMANB1 Bos taurus lysosomal alpha-mannosidase (ManB) gene, exons 1, 2, 3 and
            4
          Length = 3079

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 240  gaggtgctctgagaagttct 259
            ||||||||||||||||||||
Sbjct: 1431 gaggtgctctgagaagttct 1450
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>emb|AL592433.12| Mouse DNA sequence from clone RP23-445F7 on chromosome 1, complete
             sequence
          Length = 97685

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 295   tgaagatgtctttggaagttcagg 318
             |||||||||||||| |||||||||
Sbjct: 76344 tgaagatgtctttgaaagttcagg 76367


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,602,450
Number of Sequences: 3902068
Number of extensions: 4602450
Number of successful extensions: 72953
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72503
Number of HSP's gapped (non-prelim): 448
length of query: 420
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 398
effective length of database: 17,147,199,772
effective search space: 6824585509256
effective search space used: 6824585509256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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