ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast75b12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC136842.2| Oryza sativa (japonica cultivar-group) chromosome... 145 1e-31
2gb|AC118347.2| Oryza sativa (japonica cultivar-group) chromosome... 145 1e-31
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 145 1e-31
4dbj|AK100744.1| Oryza sativa (japonica cultivar-group) cDNA clon... 145 1e-31
5gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 145 1e-31
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
7dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
8dbj|AK105563.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
9gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome 46 0.089
10dbj|AP005613.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.089
11gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.35
12gb|AC097111.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.35
13gb|CP000316.1| Polaromonas sp. JS666, complete genome 44 0.35
14gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 44 0.35
15dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
16ref|XM_475486.1| Oryza sativa (japonica cultivar-group), predic... 42 1.4
17gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
18gb|AC130605.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
19gb|AC108523.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
20gb|AC124520.4| Mus musculus BAC clone RP23-395G14 from chromosom... 42 1.4
21gb|AC121905.3| Mus musculus BAC clone RP24-176A1 from chromosome... 42 1.4
22gb|AF187547.1| Aepyprymnus rufescens protamine P1 gene, complete... 42 1.4
23dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
24dbj|AB025613.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 1.4
25emb|CR925804.8| Zebrafish DNA sequence from clone CH211-151M7 in... 42 1.4
26dbj|AK064253.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
27emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4,... 42 1.4
28emb|AL805912.5| Mouse DNA sequence from clone RP23-425K3 on chro... 42 1.4
29gb|AC102655.7| Mus musculus chromosome 19, clone RP23-13N2, comp... 40 5.5
30ref|XM_640589.1| Dictyostelium discoideum hypothetical protein (... 40 5.5
31gb|AC109291.12| Mus musculus chromosome 18, clone RP24-231C23, c... 40 5.5
32gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome 40 5.5
33gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 5.5
34ref|XM_655550.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 5.5
35gb|BT014136.1| Lycopersicon esculentum clone 133253F, mRNA sequence 40 5.5
36gb|AC168204.1| Medicago truncatula chromosome 7 BAC clone mth2-6... 40 5.5
37gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 5.5
38gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 5.5
39gb|AC133861.5| Oryza sativa chromosome 3 BAC OSJNBb0031F05 genom... 40 5.5
40gb|AC121846.3| Mus musculus BAC clone RP24-83D6 from chromosome ... 40 5.5
41emb|CR394537.12| Zebrafish DNA sequence from clone CH211-119D19 ... 40 5.5
42emb|BX323802.24| Zebrafish DNA sequence from clone DKEY-104I9 in... 40 5.5
43gb|AC152067.21| Medicago truncatula clone mth2-22g24, complete s... 40 5.5
44gb|AC161518.3| Mus musculus chromosome 19, clone RP24-232M2, com... 40 5.5
45gb|DQ122835.1| Medicago sativa clone QF3 zinc finger Glo3-like p... 40 5.5
46gb|AC129980.6| Homo sapiens chromosome 15, clone CTD-2529M12, co... 40 5.5
47emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.5
48emb|BX640427.1| Bordetella parapertussis strain 12822, complete ... 40 5.5
49emb|BX640417.1| Bordetella pertussis strain Tohama I, complete g... 40 5.5
50emb|AL772409.4| Mouse DNA sequence from clone RP23-323L8 on chro... 40 5.5
51emb|AL627088.7| Zebrafish DNA sequence from clone RP71-1D6 in li... 40 5.5
52gb|AC165428.1| Strongylocentrotus purpuratus BAC clone contig co... 40 5.5
53emb|BX323041.9| Zebrafish DNA sequence from clone RP71-82P7 in l... 40 5.5
54emb|BX469915.7| Zebrafish DNA sequence from clone CH211-63B16 in... 40 5.5
55gb|AC118584.18| Papio anubis clone rp41-78d16, complete sequence 40 5.5
56gb|AC117273.41| Papio anubis clone rp41-167h10, complete sequence 40 5.5
57gb|AC139355.8| Medicago truncatula clone mth2-36o3, complete seq... 40 5.5
58gb|AC159027.3| Pan troglodytes BAC clone CH251-477J21 from chrom... 40 5.5
59gb|AC079329.15| Homo sapiens chromosome 11, clone RP11-265D17, c... 40 5.5
60gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.5
61emb|BX321868.13| Zebrafish DNA sequence from clone RP71-41I21, c... 40 5.5
62emb|BX248329.10| Zebrafish DNA sequence from clone CH211-206P14,... 40 5.5
63emb|BX323831.7| Zebrafish DNA sequence from clone CH211-12E7 in ... 40 5.5
64gb|AC084432.3| Genomic sequence for Arabidopsis thaliana, clone ... 40 5.5
65emb|BX248115.12| Zebrafish DNA sequence from clone CH211-208K15 ... 40 5.5
66dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
67dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
68gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 5.5
69gb|AC092682.2| Homo sapiens BAC clone RP11-734C21 from 2, comple... 40 5.5
70dbj|AP000050.1| Homo sapiens genomic DNA, chromosome 21q22.1, se... 40 5.5
71gb|AC116984.2| Dictyostelium discoideum chromosome 2 map 2567470... 40 5.5
72dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.5
73gb|AE004855.1| Pseudomonas aeruginosa PAO1, section 416 of 529 o... 40 5.5
74ref|XM_223412.3| PREDICTED: Rattus norvegicus similar to WD repe... 40 5.5
75gb|AC169379.4| Sorghum bicolor clone SB_BBc0088B22, complete seq... 40 5.5
76gb|AC084073.22| Mus musculus strain C57BL/6J chromosome 1 clone ... 40 5.5
77emb|BX276117.5| Zebrafish DNA sequence from clone CH211-112K18 i... 40 5.5
78dbj|AP002093.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
79emb|BX088525.4| Zebrafish DNA sequence from clone DKEYP-51F8 in ... 40 5.5
80emb|BX255906.7| Zebrafish DNA sequence from clone DKEY-255I1 in ... 40 5.5
81dbj|AP005532.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
82dbj|AP005310.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.5
83dbj|BS000184.1| Pan troglodytes chromosome 22 clone:RP43-082O07,... 40 5.5
84dbj|AK120918.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
85dbj|AK119445.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.5
86emb|CR762425.5| Zebrafish DNA sequence from clone CH211-181P1 in... 40 5.5
87emb|BX897729.6| Zebrafish DNA sequence from clone DKEY-240A12 in... 40 5.5
88emb|CR759796.17| Zebrafish DNA sequence from clone DKEY-18A10 in... 40 5.5
89gb|AY104453.1| Zea mays PCO071460 mRNA sequence 40 5.5
90gb|AF082985.1|AF082985 Pseudomonas aeruginosa permease for AmpC ... 40 5.5
91dbj|AP001718.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 5.5
92gb|AF428244.2| Lycopersicon esculentum heterochromatin protein 1... 40 5.5
93dbj|AK116824.1| Ciona intestinalis cDNA, clone:cilv003k21, full ... 40 5.5
94gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 5.5
95gb|AC005405.1|AC005405 BAC F18A17 from chromosome V containing T... 40 5.5
96gb|AC148020.3| Mus musculus BAC clone RP23-6A22 from 18, complet... 40 5.5
97dbj|AP004912.1| Lotus japonicus genomic DNA, chromosome 3, clone... 40 5.5
98emb|AL591596.5| Zebrafish DNA sequence from clone XX-205M23, com... 40 5.5
99emb|AL772377.6| Mouse DNA sequence from clone RP23-141B15 on chr... 40 5.5
100emb|AL591946.14| Mouse DNA sequence from clone RP23-290M7 on chr... 40 5.5
101dbj|AP000194.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 5.5
102dbj|AP000313.1| Homo sapiens genomic DNA, chromosome 21q22.1, D2... 40 5.5
103dbj|AP000117.1| Homo sapiens genomic DNA of 21q22.1, GART and AM... 40 5.5 
>gb|AC136842.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0085C16, complete sequence
          Length = 156069

 Score =  145 bits (73), Expect = 1e-31
 Identities = 121/137 (88%)
 Strand = Plus / Minus

                                                                          
Query: 148    gcacgtggcgatgctgtcgacgcccgggatgggccacctgatcccgctggccgagctggc 207
              ||||||||||||||||  |||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 111794 gcacgtggcgatgctggtgacgccggggatggggcacctgatcccgctggccgagctggc 111735

                                                                          
Query: 208    gaagcgcctggccgcgcggcacggcgccacggccacgctcatcaccttcgcctccacggc 267
              |||||| ||||| ||| |||||||||  ||| | |||||  |||| ||||||||||||||
Sbjct: 111734 gaagcggctggcggcgaggcacggcgtgacgtcgacgctgctcacgttcgcctccacggc 111675

                               
Query: 268    gtccgccacgcagcggg 284
              ||| || ||||||||||
Sbjct: 111674 gtcggcgacgcagcggg 111658



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                     
Query: 357    ccgacgcctccatcgagacgctcatgtccgaggagtgcg 395
              |||||||| ||||||||||||||||||| ||||||||||
Sbjct: 111585 ccgacgccgccatcgagacgctcatgtcggaggagtgcg 111547
to top
>gb|AC118347.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0043E10, complete sequence
          Length = 124591

 Score =  145 bits (73), Expect = 1e-31
 Identities = 121/137 (88%)
 Strand = Plus / Plus

                                                                          
Query: 148    gcacgtggcgatgctgtcgacgcccgggatgggccacctgatcccgctggccgagctggc 207
              ||||||||||||||||  |||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 120869 gcacgtggcgatgctggtgacgccggggatggggcacctgatcccgctggccgagctggc 120928

                                                                          
Query: 208    gaagcgcctggccgcgcggcacggcgccacggccacgctcatcaccttcgcctccacggc 267
              |||||| ||||| ||| |||||||||  ||| | |||||  |||| ||||||||||||||
Sbjct: 120929 gaagcggctggcggcgaggcacggcgtgacgtcgacgctgctcacgttcgcctccacggc 120988

                               
Query: 268    gtccgccacgcagcggg 284
              ||| || ||||||||||
Sbjct: 120989 gtcggcgacgcagcggg 121005



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                     
Query: 357    ccgacgcctccatcgagacgctcatgtccgaggagtgcg 395
              |||||||| ||||||||||||||||||| ||||||||||
Sbjct: 121078 ccgacgccgccatcgagacgctcatgtcggaggagtgcg 121116
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  145 bits (73), Expect = 1e-31
 Identities = 121/137 (88%)
 Strand = Plus / Minus

                                                                            
Query: 148      gcacgtggcgatgctgtcgacgcccgggatgggccacctgatcccgctggccgagctggc 207
                ||||||||||||||||  |||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 22073798 gcacgtggcgatgctggtgacgccggggatggggcacctgatcccgctggccgagctggc 22073739

                                                                            
Query: 208      gaagcgcctggccgcgcggcacggcgccacggccacgctcatcaccttcgcctccacggc 267
                |||||| ||||| ||| |||||||||  ||| | |||||  |||| ||||||||||||||
Sbjct: 22073738 gaagcggctggcggcgaggcacggcgtgacgtcgacgctgctcacgttcgcctccacggc 22073679

                                 
Query: 268      gtccgccacgcagcggg 284
                ||| || ||||||||||
Sbjct: 22073678 gtcggcgacgcagcggg 22073662



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                       
Query: 357      ccgacgcctccatcgagacgctcatgtccgaggagtgcg 395
                |||||||| ||||||||||||||||||| ||||||||||
Sbjct: 22073589 ccgacgccgccatcgagacgctcatgtcggaggagtgcg 22073551
to top
>dbj|AK100744.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118G04, full
           insert sequence
          Length = 1862

 Score =  145 bits (73), Expect = 1e-31
 Identities = 121/137 (88%)
 Strand = Plus / Plus

                                                                       
Query: 148 gcacgtggcgatgctgtcgacgcccgggatgggccacctgatcccgctggccgagctggc 207
           ||||||||||||||||  |||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 204 gcacgtggcgatgctggtgacgccggggatggggcacctgatcccgctggccgagctggc 263

                                                                       
Query: 208 gaagcgcctggccgcgcggcacggcgccacggccacgctcatcaccttcgcctccacggc 267
           |||||| ||||| ||| |||||||||  ||| | |||||  |||| ||||||||||||||
Sbjct: 264 gaagcggctggcggcgaggcacggcgtgacgtcgacgctgctcacgttcgcctccacggc 323

                            
Query: 268 gtccgccacgcagcggg 284
           ||| || ||||||||||
Sbjct: 324 gtcggcgacgcagcggg 340



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 357 ccgacgcctccatcgagacgctcatgtccgaggagtgcg 395
           |||||||| ||||||||||||||||||| ||||||||||
Sbjct: 413 ccgacgccgccatcgagacgctcatgtcggaggagtgcg 451
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  145 bits (73), Expect = 1e-31
 Identities = 121/137 (88%)
 Strand = Plus / Minus

                                                                            
Query: 148      gcacgtggcgatgctgtcgacgcccgggatgggccacctgatcccgctggccgagctggc 207
                ||||||||||||||||  |||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 22383709 gcacgtggcgatgctggtgacgccggggatggggcacctgatcccgctggccgagctggc 22383650

                                                                            
Query: 208      gaagcgcctggccgcgcggcacggcgccacggccacgctcatcaccttcgcctccacggc 267
                |||||| ||||| ||| |||||||||  ||| | |||||  |||| ||||||||||||||
Sbjct: 22383649 gaagcggctggcggcgaggcacggcgtgacgtcgacgctgctcacgttcgcctccacggc 22383590

                                 
Query: 268      gtccgccacgcagcggg 284
                ||| || ||||||||||
Sbjct: 22383589 gtcggcgacgcagcggg 22383573



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                       
Query: 357      ccgacgcctccatcgagacgctcatgtccgaggagtgcg 395
                |||||||| ||||||||||||||||||| ||||||||||
Sbjct: 22383500 ccgacgccgccatcgagacgctcatgtcggaggagtgcg 22383462
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                           
Query: 179     ggccacctgatcccgctggccgagctggcgaagcgcctggccgcgcggcacggcgccacg 238
               |||||||| |||||||||||||||||||||  ||| || ||||  |  ||||||| | ||
Sbjct: 8092795 ggccacctcatcccgctggccgagctggcgcggcggctcgccgaccaccacggcgtcgcg 8092736

                                    
Query: 239     gccacgctcatcaccttcgcc 259
                |||||||| |||||||||||
Sbjct: 8092735 cccacgctcgtcaccttcgcc 8092715



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                             
Query: 179     ggccacctgatcccgctggccgagctggcg 208
               |||||||| |||||||||||||||||||||
Sbjct: 8076485 ggccacctcatcccgctggccgagctggcg 8076456



 Score = 46.1 bits (23), Expect = 0.089
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                              
Query: 179     ggccacctgatcccgctggccgagctggcga 209
               |||||||| ||||||||||||||| ||||||
Sbjct: 8034468 ggccacctcatcccgctggccgagttggcga 8034438



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 179     ggccacctgatcccgctggccgagctggcg 208
               |||||||| |||||| ||||||||||||||
Sbjct: 8018642 ggccacctcatcccgatggccgagctggcg 8018613



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 6        atcaaatcaaatcatccatc 25
                ||||||||||||||||||||
Sbjct: 11715910 atcaaatcaaatcatccatc 11715929
to top
>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0503B05
          Length = 156814

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 68/81 (83%)
 Strand = Plus / Minus

                                                                         
Query: 179   ggccacctgatcccgctggccgagctggcgaagcgcctggccgcgcggcacggcgccacg 238
             |||||||| |||||||||||||||||||||  ||| || ||||  |  ||||||| | ||
Sbjct: 80988 ggccacctcatcccgctggccgagctggcgcggcggctcgccgaccaccacggcgtcgcg 80929

                                  
Query: 239   gccacgctcatcaccttcgcc 259
              |||||||| |||||||||||
Sbjct: 80928 cccacgctcgtcaccttcgcc 80908



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                           
Query: 179   ggccacctgatcccgctggccgagctggcg 208
             |||||||| |||||||||||||||||||||
Sbjct: 64678 ggccacctcatcccgctggccgagctggcg 64649



 Score = 46.1 bits (23), Expect = 0.089
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 179   ggccacctgatcccgctggccgagctggcga 209
             |||||||| ||||||||||||||| ||||||
Sbjct: 22661 ggccacctcatcccgctggccgagttggcga 22631



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 179  ggccacctgatcccgctggccgagctggcg 208
            |||||||| |||||| ||||||||||||||
Sbjct: 6835 ggccacctcatcccgatggccgagctggcg 6806
to top
>dbj|AK105563.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-B11, full
           insert sequence
          Length = 1694

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 68/81 (83%)
 Strand = Plus / Plus

                                                                       
Query: 179 ggccacctgatcccgctggccgagctggcgaagcgcctggccgcgcggcacggcgccacg 238
           |||||||| |||||||||||||||||||||  ||| || ||||  |  ||||||| | ||
Sbjct: 150 ggccacctcatcccgctggccgagctggcgcggcggctcgccgaccaccacggcgtcgcg 209

                                
Query: 239 gccacgctcatcaccttcgcc 259
            |||||||| |||||||||||
Sbjct: 210 cccacgctcgtcaccttcgcc 230
to top
>gb|CP000142.2| Pelobacter carbinolicus DSM 2380, complete genome
          Length = 3665893

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 108     gcggcatctccggcggcacggcg 130
               |||||||||||||||||||||||
Sbjct: 2875563 gcggcatctccggcggcacggcg 2875585
to top
>dbj|AP005613.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0082C09
          Length = 160665

 Score = 46.1 bits (23), Expect = 0.089
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 179    ggccacctgatcccgctggccgagctggcga 209
              |||||||| ||||||||||||||| ||||||
Sbjct: 157883 ggccacctcatcccgctggccgagttggcga 157853



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 179    ggccacctgatcccgctggccgagctggcg 208
              |||||||| |||||| ||||||||||||||
Sbjct: 142057 ggccacctcatcccgatggccgagctggcg 142028
to top
>gb|AC097112.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1741_B01,
             complete sequence
          Length = 147704

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 238   ggccacgctcatcaccttcgcc 259
             ||||||||||||||||||||||
Sbjct: 26622 ggccacgctcatcaccttcgcc 26601
to top
>gb|AC097111.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1014_C08,
             complete sequence
          Length = 95638

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 238   ggccacgctcatcaccttcgcc 259
             ||||||||||||||||||||||
Sbjct: 79283 ggccacgctcatcaccttcgcc 79262
to top
>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 211     gcgcctggccgcgcggcacggc 232
               ||||||||||||||||||||||
Sbjct: 4008586 gcgcctggccgcgcggcacggc 4008607
to top
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 212     cgcctggccgcgcggcacggcg 233
               ||||||||||||||||||||||
Sbjct: 2237193 cgcctggccgcgcggcacggcg 2237172
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 238      ggccacgctcatcaccttcgcc 259
                ||||||||||||||||||||||
Sbjct: 26381931 ggccacgctcatcaccttcgcc 26381910



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 1        atcaaatcaaatcaaatcatc 21
                |||||||||||||||||||||
Sbjct: 29326294 atcaaatcaaatcaaatcatc 29326314



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 30       ggccggagaaggagaaggagc 50
                |||||||||||||||||||||
Sbjct: 24328271 ggccggagaaggagaaggagc 24328291
to top
>ref|XM_475486.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2472

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 30  ggccggagaaggagaaggagc 50
           |||||||||||||||||||||
Sbjct: 155 ggccggagaaggagaaggagc 175
to top
>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08,
              complete sequence
          Length = 142196

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1      atcaaatcaaatcaaatcatc 21
              |||||||||||||||||||||
Sbjct: 104951 atcaaatcaaatcaaatcatc 104971
to top
>gb|AC130605.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0010D04,
             complete sequence
          Length = 122599

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 30    ggccggagaaggagaaggagc 50
             |||||||||||||||||||||
Sbjct: 14061 ggccggagaaggagaaggagc 14081
to top
>gb|AC108523.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_C04,
             complete sequence
          Length = 96328

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 30    ggccggagaaggagaaggagc 50
             |||||||||||||||||||||
Sbjct: 94007 ggccggagaaggagaaggagc 94027
to top
>gb|AC124520.4| Mus musculus BAC clone RP23-395G14 from chromosome 7, complete sequence
          Length = 205352

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 34     ggagaaggagaaggagcatcgatcc 58
              |||||||||||||||||||| ||||
Sbjct: 144415 ggagaaggagaaggagcatccatcc 144391
to top
>gb|AC121905.3| Mus musculus BAC clone RP24-176A1 from chromosome 3, complete sequence
          Length = 178517

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 1     atcaaatcaaatcaaatcatccatc 25
             |||||| ||||||||||||||||||
Sbjct: 50963 atcaaaacaaatcaaatcatccatc 50987
to top
>gb|AF187547.1| Aepyprymnus rufescens protamine P1 gene, complete cds
          Length = 566

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 31  gccggagaaggagaaggagca 51
           |||||||||||||||||||||
Sbjct: 172 gccggagaaggagaaggagca 192
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 34     ggagaaggagaaggagcatcg 54
              |||||||||||||||||||||
Sbjct: 432709 ggagaaggagaaggagcatcg 432689
to top
>dbj|AB025613.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K2I5
          Length = 71807

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1     atcaaatcaaatcaaatcatc 21
             |||||||||||||||||||||
Sbjct: 47575 atcaaatcaaatcaaatcatc 47595
to top
>emb|CR925804.8| Zebrafish DNA sequence from clone CH211-151M7 in linkage group 14,
             complete sequence
          Length = 144393

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 1     atcaaatcaaatcaaatcatc 21
             |||||||||||||||||||||
Sbjct: 38643 atcaaatcaaatcaaatcatc 38663
to top
>dbj|AK064253.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-C07,
          full insert sequence
          Length = 1538

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 1  atcaaatcaaatcaaatcatc 21
          |||||||||||||||||||||
Sbjct: 21 atcaaatcaaatcaaatcatc 1
to top
>emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085F13,
             complete sequence
          Length = 130249

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    ggagaaggagaaggagcatcg 54
             |||||||||||||||||||||
Sbjct: 71461 ggagaaggagaaggagcatcg 71441
to top
>emb|AL805912.5| Mouse DNA sequence from clone RP23-425K3 on chromosome 4, complete
              sequence
          Length = 151967

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 1      atcaaatcaaatcaaatcatc 21
              |||||||||||||||||||||
Sbjct: 122279 atcaaatcaaatcaaatcatc 122299
to top
>gb|AC102655.7| Mus musculus chromosome 19, clone RP23-13N2, complete sequence
          Length = 202294

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      atcaaatcaaatcaaatcat 20
              ||||||||||||||||||||
Sbjct: 181023 atcaaatcaaatcaaatcat 181042
to top
>ref|XM_640589.1| Dictyostelium discoideum hypothetical protein (DDB0216800), partial
           mRNA
          Length = 201

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 1   atcaaatcaaatcaaatcatccat 24
           ||||||||||||||||||| ||||
Sbjct: 83  atcaaatcaaatcaaatcaaccat 106
to top
>gb|AC109291.12| Mus musculus chromosome 18, clone RP24-231C23, complete sequence
          Length = 191711

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    ggagaaggagaaggagcatc 53
             ||||||||||||||||||||
Sbjct: 19457 ggagaaggagaaggagcatc 19438
to top
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
          Length = 2560265

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 201    agctggcgaagcgcctggcc 220
              ||||||||||||||||||||
Sbjct: 642995 agctggcgaagcgcctggcc 642976
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 217    ggccgcgcggcacggcgccacggc 240
              ||||||||||||||||| ||||||
Sbjct: 509988 ggccgcgcggcacggcggcacggc 510011
to top
>ref|XM_655550.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3038.2), mRNA
          Length = 1650

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 217  ggccgcgcggcacggcgccacggccacg 244
            ||||||||||  ||||||||||||||||
Sbjct: 1498 ggccgcgcggaccggcgccacggccacg 1471
to top
>gb|BT014136.1| Lycopersicon esculentum clone 133253F, mRNA sequence
          Length = 1448

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 30  ggccggagaaggagaaggag 49
           ||||||||||||||||||||
Sbjct: 178 ggccggagaaggagaaggag 197
to top
>gb|AC168204.1| Medicago truncatula chromosome 7 BAC clone mth2-64h15, complete
             sequence
          Length = 45758

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     atcaaatcaaatcatccatc 25
             ||||||||||||||||||||
Sbjct: 40472 atcaaatcaaatcatccatc 40453
to top
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 108     gcggcatctccggcggcacg 127
               ||||||||||||||||||||
Sbjct: 2133090 gcggcatctccggcggcacg 2133071
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 1        atcaaatcaaatcaaatcat 20
                ||||||||||||||||||||
Sbjct: 18039551 atcaaatcaaatcaaatcat 18039532
to top
>gb|AC133861.5| Oryza sativa chromosome 3 BAC OSJNBb0031F05 genomic sequence, complete
             sequence
          Length = 131589

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atcaaatcaaatcaaatcat 20
             ||||||||||||||||||||
Sbjct: 76650 atcaaatcaaatcaaatcat 76669
to top
>gb|AC121846.3| Mus musculus BAC clone RP24-83D6 from chromosome 15, complete sequence
          Length = 182309

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atcaaatcaaatcaaatcat 20
             ||||||||||||||||||||
Sbjct: 34478 atcaaatcaaatcaaatcat 34497
to top
>emb|CR394537.12| Zebrafish DNA sequence from clone CH211-119D19 in linkage group 16,
             complete sequence
          Length = 168543

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atcaaatcaaatcaaatcat 20
             ||||||||||||||||||||
Sbjct: 77662 atcaaatcaaatcaaatcat 77681
to top
>emb|BX323802.24| Zebrafish DNA sequence from clone DKEY-104I9 in linkage group 10,
              complete sequence
          Length = 109743

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      atcaaatcaaatcaaatcat 20
              ||||||||||||||||||||
Sbjct: 108081 atcaaatcaaatcaaatcat 108100
to top
>gb|AC152067.21| Medicago truncatula clone mth2-22g24, complete sequence
          Length = 86972

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     atcaaatcaaatcaaatcat 20
             ||||||||||||||||||||
Sbjct: 24565 atcaaatcaaatcaaatcat 24546
to top
>gb|AC161518.3| Mus musculus chromosome 19, clone RP24-232M2, complete sequence
          Length = 176356

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atcaaatcaaatcaaatcat 20
             ||||||||||||||||||||
Sbjct: 36818 atcaaatcaaatcaaatcat 36837
to top
>gb|DQ122835.1| Medicago sativa clone QF3 zinc finger Glo3-like protein mRNA,
           partial cds
          Length = 658

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 1   atcaaatcaaatcaaatcat 20
           ||||||||||||||||||||
Sbjct: 130 atcaaatcaaatcaaatcat 149
to top
>gb|AC129980.6| Homo sapiens chromosome 15, clone CTD-2529M12, complete sequence
          Length = 236391

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atcaaatcaaatcaaatcat 20
             ||||||||||||||||||||
Sbjct: 12686 atcaaatcaaatcaaatcat 12705
to top
>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16
          Length = 349008

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 214    cctggccgcgcggcacggcgccac 237
              ||||||||||| ||||||||||||
Sbjct: 216565 cctggccgcgctgcacggcgccac 216542
to top
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14
          Length = 348997

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 214    cctggccgcgcggcacggcgccac 237
              ||||||||||| ||||||||||||
Sbjct: 129079 cctggccgcgctgcacggcgccac 129056
to top
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12
          Length = 348934

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 214    cctggccgcgcggcacggcgccac 237
              ||||||||||| ||||||||||||
Sbjct: 149162 cctggccgcgctgcacggcgccac 149185
to top
>emb|AL772409.4| Mouse DNA sequence from clone RP23-323L8 on chromosome 11 Contains the
             5' end of the Fgf18  gene for fibroblast growth factor 18,
             the Npm1 gene for nucleophosmin 1, a single-stranded DNA
             binding protein 1 (Ssbp1) pseudogene, the Tlx3 gene for
             T-cell leukemia, homeobox 3, a novel gene, the 3' end of
             the Ranbp17 gene for RAN binding protein 17, a
             glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene
             and four CpG islands, complete sequence
          Length = 161564

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atcaaatcaaatcaaatcat 20
             ||||||||||||||||||||
Sbjct: 50340 atcaaatcaaatcaaatcat 50359
to top
>emb|AL627088.7| Zebrafish DNA sequence from clone RP71-1D6 in linkage group 18 Contains a
              CpG island, complete sequence
          Length = 151446

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      atcaaatcaaatcaaatcat 20
              ||||||||||||||||||||
Sbjct: 146692 atcaaatcaaatcaaatcat 146673
to top
>gb|AC165428.1| Strongylocentrotus purpuratus BAC clone contig containing Eve, the hox
              cluster, cholinesterase, and COLP5alpha genes, complete
              sequence
          Length = 796348

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      atcaaatcaaatcaaatcat 20
              ||||||||||||||||||||
Sbjct: 764826 atcaaatcaaatcaaatcat 764845
to top
>emb|BX323041.9| Zebrafish DNA sequence from clone RP71-82P7 in linkage group 7,
             complete sequence
          Length = 146935

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atcaaatcaaatcaaatcat 20
             ||||||||||||||||||||
Sbjct: 43832 atcaaatcaaatcaaatcat 43851
to top
>emb|BX469915.7| Zebrafish DNA sequence from clone CH211-63B16 in linkage group 17,
              complete sequence
          Length = 172252

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 1      atcaaatcaaatcaaatcatccat 24
              ||||||||||||||||||| ||||
Sbjct: 166798 atcaaatcaaatcaaatcagccat 166775
to top
>gb|AC118584.18| Papio anubis clone rp41-78d16, complete sequence
          Length = 189610

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atcaaatcaaatcaaatcat 20
             ||||||||||||||||||||
Sbjct: 35341 atcaaatcaaatcaaatcat 35360
to top
>gb|AC117273.41| Papio anubis clone rp41-167h10, complete sequence
          Length = 184931

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      atcaaatcaaatcaaatcat 20
              ||||||||||||||||||||
Sbjct: 114952 atcaaatcaaatcaaatcat 114933
to top
>gb|AC139355.8| Medicago truncatula clone mth2-36o3, complete sequence
          Length = 108135

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     atcaaatcaaatcatccatc 25
             ||||||||||||||||||||
Sbjct: 93229 atcaaatcaaatcatccatc 93248
to top
>gb|AC159027.3| Pan troglodytes BAC clone CH251-477J21 from chromosome unknown, complete
              sequence
          Length = 212323

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      atcaaatcaaatcaaatcat 20
              ||||||||||||||||||||
Sbjct: 130536 atcaaatcaaatcaaatcat 130517
to top
>gb|AC079329.15| Homo sapiens chromosome 11, clone RP11-265D17, complete sequence
          Length = 156540

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     atcaaatcaaatcaaatcat 20
             ||||||||||||||||||||
Sbjct: 70852 atcaaatcaaatcaaatcat 70833
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 213     gcctggccgcgcggcacggc 232
               ||||||||||||||||||||
Sbjct: 1582156 gcctggccgcgcggcacggc 1582175
to top
>emb|BX321868.13| Zebrafish DNA sequence from clone RP71-41I21, complete sequence
          Length = 135717

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atcaaatcaaatcaaatcat 20
             ||||||||||||||||||||
Sbjct: 14443 atcaaatcaaatcaaatcat 14462
to top
>emb|BX248329.10| Zebrafish DNA sequence from clone CH211-206P14, complete sequence
          Length = 151789

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atcaaatcaaatcaaatcat 20
             ||||||||||||||||||||
Sbjct: 61116 atcaaatcaaatcaaatcat 61135
to top
>emb|BX323831.7| Zebrafish DNA sequence from clone CH211-12E7 in linkage group 23,
             complete sequence
          Length = 180638

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     atcaaatcaaatcaaatcat 20
             ||||||||||||||||||||
Sbjct: 95070 atcaaatcaaatcaaatcat 95051
to top
>gb|AC084432.3| Genomic sequence for Arabidopsis thaliana, clone T5I5, from chromosome
             V, complete sequence
          Length = 18198

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     atcaaatcaaatcaaatcat 20
             ||||||||||||||||||||
Sbjct: 17167 atcaaatcaaatcaaatcat 17148
to top
>emb|BX248115.12| Zebrafish DNA sequence from clone CH211-208K15 in linkage group 16,
              complete sequence
          Length = 211852

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 1      atcaaatcaaatcaaatcatccat 24
              ||||||||||||||||||| ||||
Sbjct: 135704 atcaaatcaaatcaaatcaaccat 135681
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 1        atcaaatcaaatcaaatcat 20
                ||||||||||||||||||||
Sbjct: 18033092 atcaaatcaaatcaaatcat 18033073
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 226     gcacggcgccacggccacgc 245
               ||||||||||||||||||||
Sbjct: 5971624 gcacggcgccacggccacgc 5971605
to top
>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 214     cctggccgcgcggcacggcgccacggcc 241
               ||||||||||| || |||||||||||||
Sbjct: 2489638 cctggccgcgctgctcggcgccacggcc 2489611
to top
>gb|AC092682.2| Homo sapiens BAC clone RP11-734C21 from 2, complete sequence
          Length = 188920

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     ccacggccggagaaggagaa 45
              ||||||||||||||||||||
Sbjct: 133439 ccacggccggagaaggagaa 133420
to top
>dbj|AP000050.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 21/28, complete
             sequence
          Length = 114929

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     atcaaatcaaatcaaatcat 20
             ||||||||||||||||||||
Sbjct: 83149 atcaaatcaaatcaaatcat 83130
to top
>gb|AC116984.2| Dictyostelium discoideum chromosome 2 map 2567470-3108875 strain AX4,
              complete sequence
          Length = 541399

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      atcaaatcaaatcaaatcat 20
              ||||||||||||||||||||
Sbjct: 357236 atcaaatcaaatcaaatcat 357217
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 254     ttcgcctccacggcgtccgc 273
               ||||||||||||||||||||
Sbjct: 2265926 ttcgcctccacggcgtccgc 2265907



 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 347    gacctgccgcccgacgcctc 366
              ||||||||||||||||||||
Sbjct: 714136 gacctgccgcccgacgcctc 714117
to top
>gb|AE004855.1| Pseudomonas aeruginosa PAO1, section 416 of 529 of the complete
            genome
          Length = 11578

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 211  gcgcctggccgcgcggcacg 230
            ||||||||||||||||||||
Sbjct: 2514 gcgcctggccgcgcggcacg 2533
to top
>ref|XM_223412.3| PREDICTED: Rattus norvegicus similar to WD repeat membrane protein
            (predicted) (LOC305349), mRNA
          Length = 4367

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 201  agctggcgaagcgcctggcc 220
            ||||||||||||||||||||
Sbjct: 2332 agctggcgaagcgcctggcc 2351
to top
>gb|AC169379.4| Sorghum bicolor clone SB_BBc0088B22, complete sequence
          Length = 105215

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   cggcggaggccggccggcca 145
             ||||||||||||||||||||
Sbjct: 95035 cggcggaggccggccggcca 95054
to top
>gb|AC084073.22| Mus musculus strain C57BL/6J chromosome 1 clone rp23-85a8, complete
             sequence
          Length = 236834

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     atcaaatcaaatcaaatcat 20
             ||||||||||||||||||||
Sbjct: 90998 atcaaatcaaatcaaatcat 90979
to top
>emb|BX276117.5| Zebrafish DNA sequence from clone CH211-112K18 in linkage group 17,
              complete sequence
          Length = 181677

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      atcaaatcaaatcaaatcat 20
              ||||||||||||||||||||
Sbjct: 151421 atcaaatcaaatcaaatcat 151402
to top
>dbj|AP002093.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0466B10
          Length = 151806

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   gcacggcgccacggccacgc 245
             ||||||||||||||||||||
Sbjct: 39512 gcacggcgccacggccacgc 39493
to top
>emb|BX088525.4| Zebrafish DNA sequence from clone DKEYP-51F8 in linkage group 10,
           complete sequence
          Length = 212133

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 1   atcaaatcaaatcaaatcat 20
           ||||||||||||||||||||
Sbjct: 338 atcaaatcaaatcaaatcat 357
to top
>emb|BX255906.7| Zebrafish DNA sequence from clone DKEY-255I1 in linkage group 5,
             complete sequence
          Length = 151863

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     atcaaatcaaatcaaatcat 20
             ||||||||||||||||||||
Sbjct: 42120 atcaaatcaaatcaaatcat 42101
to top
>dbj|AP005532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0010K08
          Length = 184760

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      atcaaatcaaatcatccatc 25
              ||||||||||||||||||||
Sbjct: 162199 atcaaatcaaatcatccatc 162218
to top
>dbj|AP005310.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0477B05
          Length = 142166

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     atcaaatcaaatcatccatc 25
             ||||||||||||||||||||
Sbjct: 23800 atcaaatcaaatcatccatc 23819
to top
>dbj|BS000184.1| Pan troglodytes chromosome 22 clone:RP43-082O07, map 22, complete
             sequences
          Length = 171361

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     atcaaatcaaatcaaatcat 20
             ||||||||||||||||||||
Sbjct: 66159 atcaaatcaaatcaaatcat 66140
to top
>dbj|AK120918.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023034N15, full
           insert sequence
          Length = 1612

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 243 cgctcatcaccttcgcctcc 262
           ||||||||||||||||||||
Sbjct: 31  cgctcatcaccttcgcctcc 50
to top
>dbj|AK119445.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-133-C12, full
           insert sequence
          Length = 991

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 243 cgctcatcaccttcgcctcc 262
           ||||||||||||||||||||
Sbjct: 30  cgctcatcaccttcgcctcc 49
to top
>emb|CR762425.5| Zebrafish DNA sequence from clone CH211-181P1 in linkage group 18,
             complete sequence
          Length = 145468

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     atcaaatcaaatcaaatcat 20
             ||||||||||||||||||||
Sbjct: 82319 atcaaatcaaatcaaatcat 82300
to top
>emb|BX897729.6| Zebrafish DNA sequence from clone DKEY-240A12 in linkage group 4,
             complete sequence
          Length = 201932

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     atcaaatcaaatcaaatcat 20
             ||||||||||||||||||||
Sbjct: 20326 atcaaatcaaatcaaatcat 20307
to top
>emb|CR759796.17| Zebrafish DNA sequence from clone DKEY-18A10 in linkage group 10,
            complete sequence
          Length = 130961

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 1    atcaaatcaaatcaaatcat 20
            ||||||||||||||||||||
Sbjct: 7537 atcaaatcaaatcaaatcat 7518
to top
>gb|AY104453.1| Zea mays PCO071460 mRNA sequence
          Length = 1528

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 94  agcaatggaggcgagcggca 113
           ||||||||||||||||||||
Sbjct: 29  agcaatggaggcgagcggca 48
to top
>gb|AF082985.1|AF082985 Pseudomonas aeruginosa permease for AmpC beta-lactamase expression
            AmpG (ampG) gene, complete cds; and unknown gene
          Length = 2960

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 211  gcgcctggccgcgcggcacg 230
            ||||||||||||||||||||
Sbjct: 1605 gcgcctggccgcgcggcacg 1624
to top
>dbj|AP001718.1| Homo sapiens genomic DNA, chromosome 21q, section 62/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      atcaaatcaaatcaaatcat 20
              ||||||||||||||||||||
Sbjct: 161910 atcaaatcaaatcaaatcat 161891
to top
>gb|AF428244.2| Lycopersicon esculentum heterochromatin protein 1-like protein
           (HP1-L) mRNA, complete cds
          Length = 1477

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 30  ggccggagaaggagaaggag 49
           ||||||||||||||||||||
Sbjct: 173 ggccggagaaggagaaggag 192
to top
>dbj|AK116824.1| Ciona intestinalis cDNA, clone:cilv003k21, full insert sequence
          Length = 1833

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 29 cggccggagaaggagaagga 48
          ||||||||||||||||||||
Sbjct: 56 cggccggagaaggagaagga 75
to top
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 187     gatcccgctggccgagctgg 206
               ||||||||||||||||||||
Sbjct: 1980622 gatcccgctggccgagctgg 1980603
to top
>gb|AC005405.1|AC005405 BAC F18A17 from chromosome V containing TINY at 60.5 cM, complete
           sequence
          Length = 94362

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 1   atcaaatcaaatcaaatcat 20
           ||||||||||||||||||||
Sbjct: 970 atcaaatcaaatcaaatcat 951
to top
>gb|AC148020.3| Mus musculus BAC clone RP23-6A22 from 18, complete sequence
          Length = 238892

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 34     ggagaaggagaaggagcatc 53
              ||||||||||||||||||||
Sbjct: 104409 ggagaaggagaaggagcatc 104428
to top
>dbj|AP004912.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT11L19, TM0070,
             complete sequence
          Length = 128164

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atcaaatcaaatcaaatcat 20
             ||||||||||||||||||||
Sbjct: 22370 atcaaatcaaatcaaatcat 22389
to top
>emb|AL591596.5| Zebrafish DNA sequence from clone XX-205M23, complete sequence
          Length = 84809

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atcaaatcaaatcaaatcat 20
             ||||||||||||||||||||
Sbjct: 51812 atcaaatcaaatcaaatcat 51831
to top
>emb|AL772377.6| Mouse DNA sequence from clone RP23-141B15 on chromosome 2, complete
              sequence
          Length = 217837

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      atcaaatcaaatcaaatcat 20
              ||||||||||||||||||||
Sbjct: 140708 atcaaatcaaatcaaatcat 140689
to top
>emb|AL591946.14| Mouse DNA sequence from clone RP23-290M7 on chromosome 15, complete
             sequence
          Length = 188892

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atcaaatcaaatcaaatcat 20
             ||||||||||||||||||||
Sbjct: 23473 atcaaatcaaatcaaatcat 23492
to top
>dbj|AP000194.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone
             Q78C10-f32E9, segment 21/21, complete sequence
          Length = 83744

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     atcaaatcaaatcaaatcat 20
             ||||||||||||||||||||
Sbjct: 19736 atcaaatcaaatcaaatcat 19717
to top
>dbj|AP000313.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region,
             clone:149C3, complete sequence
          Length = 78539

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     atcaaatcaaatcaaatcat 20
             ||||||||||||||||||||
Sbjct: 46760 atcaaatcaaatcaaatcat 46741
to top
>dbj|AP000117.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related,  Q78C10-149C3
              region, segment 20/20
          Length = 151516

 Score = 40.1 bits (20), Expect = 5.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 1      atcaaatcaaatcaaatcat 20
              ||||||||||||||||||||
Sbjct: 119736 atcaaatcaaatcaaatcat 119717


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,343,703
Number of Sequences: 3902068
Number of extensions: 2343703
Number of successful extensions: 125186
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 123280
Number of HSP's gapped (non-prelim): 1848
length of query: 409
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 387
effective length of database: 17,147,199,772
effective search space: 6635966311764
effective search space used: 6635966311764
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top