| Clone Name | bast75a07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 32 gttcttgagctgatcactaatcattagctacttgattg 69 ||||||||||| |||||||||||||||||||||||||| Sbjct: 22203744 gttcttgagctcatcactaatcattagctacttgattg 22203707
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 67.9 bits (34), Expect = 3e-08 Identities = 37/38 (97%) Strand = Plus / Minus Query: 32 gttcttgagctgatcactaatcattagctacttgattg 69 ||||||||||| |||||||||||||||||||||||||| Sbjct: 8990 gttcttgagctcatcactaatcattagctacttgattg 8953
>gb|AC017083.7| Homo sapiens BAC clone RP11-474G23 from 2, complete sequence Length = 198278 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 409 cccctgtacttgtggtcttgt 429 ||||||||||||||||||||| Sbjct: 15196 cccctgtacttgtggtcttgt 15176
>gb|AC125114.3| Mus musculus BAC clone RP24-254M13 from chromosome 18, complete sequence Length = 158836 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 acagcaatgcccgatttctt 232 |||||||||||||||||||| Sbjct: 34320 acagcaatgcccgatttctt 34339
>gb|AC125162.4| Mus musculus BAC clone RP24-421D9 from chromosome 8, complete sequence Length = 206643 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 aaggcacacacccctgtact 418 |||||||||||||||||||| Sbjct: 45414 aaggcacacacccctgtact 45433
>ref|XM_666350.1| Plasmodium berghei strain ANKA hypothetical protein (PB000202.03.0) partial mRNA Length = 948 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 gaaagttgttaattattcaa 335 |||||||||||||||||||| Sbjct: 903 gaaagttgttaattattcaa 922
>gb|AC110236.8| Mus musculus chromosome 15, clone RP23-104L4, complete sequence Length = 233499 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 aagacagcaatgcccgattt 229 |||||||||||||||||||| Sbjct: 48634 aagacagcaatgcccgattt 48653
>emb|AL683886.8| Human DNA sequence from clone RP11-289O2 on chromosome 1, complete sequence Length = 145108 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 cattagctacttgattgtat 72 |||||||||||||||||||| Sbjct: 76120 cattagctacttgattgtat 76139
>gb|AF228661.4| Homo sapiens chromosome 8 clone CTD-3015B2 map q11-q13, complete sequence Length = 140374 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 aattacaggaccatatgtct 172 |||||||||||||||||||| Sbjct: 67904 aattacaggaccatatgtct 67885
>gb|AC104939.7| Homo sapiens chromosome 8, clone CTD-3015B2, complete sequence Length = 140375 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 aattacaggaccatatgtct 172 |||||||||||||||||||| Sbjct: 67678 aattacaggaccatatgtct 67659
>gb|AC008125.9| Homo sapiens 12 BAC RPCI11-25E2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 189286 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 250 catagcaatgatgaattgaatcat 273 ||||||||||||| |||||||||| Sbjct: 48926 catagcaatgatggattgaatcat 48903
>gb|AF215845.3| Homo sapiens chromosome 8 clone CTD-2542N7 map q11-q13, complete sequence Length = 237705 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 153 aattacaggaccatatgtct 172 |||||||||||||||||||| Sbjct: 204731 aattacaggaccatatgtct 204712
>gb|AY740531.1| Capsicum annuum WRKY transcription factor-c (WRKY-c) mRNA, complete cds Length = 1493 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 cttgtgtgtgaaaggattgc 92 |||||||||||||||||||| Sbjct: 1253 cttgtgtgtgaaaggattgc 1272
>emb|AL954684.9| Mouse DNA sequence from clone RP24-352O9 on chromosome 2, complete sequence Length = 170478 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 ttgtggtcttgtactgacag 437 |||||||||||||||||||| Sbjct: 164281 ttgtggtcttgtactgacag 164262
>emb|AL691474.29| Mouse DNA sequence from clone RP23-406D5 on chromosome 4, complete sequence Length = 176652 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 ctaatcattagctacttgat 67 |||||||||||||||||||| Sbjct: 86469 ctaatcattagctacttgat 86488 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,898,559 Number of Sequences: 3902068 Number of extensions: 3898559 Number of successful extensions: 71853 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 71804 Number of HSP's gapped (non-prelim): 49 length of query: 489 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 467 effective length of database: 17,147,199,772 effective search space: 8007742293524 effective search space used: 8007742293524 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)