ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast74g10 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 161 bits (81), Expect = 2e-36 Identities = 271/331 (81%), Gaps = 5/331 (1%) Strand = Plus / Plus Query: 101 cgcatataccggagcggcaagatggaccgcctctgtcgcccggcgcgtgcgcccaccggc 160 ||||| ||||||||||||||||||||||||||| | || | || |||||| ||||| Sbjct: 17372900 cgcatctaccggagcggcaagatggaccgcctccaccatcccgtgcttgcgcctgccggc 17372959 Query: 161 ctcgacccgattaccggcgtcacgtccaaagacgtggtccttggctccgacaccggcatg 220 ||||| || ||||||||||||||||| ||||||||| | | | | ||||||||| || Sbjct: 17372960 gtcgacgcggccaccggcgtcacgtccaaggacgtggtcgtcgacgctgacaccggcctg 17373019 Query: 221 tgcgtacgcctcttcctccccaccagcccagatcacttcgaaaagaagctcccgataatc 280 | ||| ||| ||||||||||| || ||||||||| | | |||||||| || | || Sbjct: 17373020 tccgtgcgcgtcttcctccccgcccgcccagatccgtcc---aagaagctacccgtcctc 17373076 Query: 281 gtcttcttccatggcggcggcttcctcgtcgagtcggccgtctct-caacagtaccacaa 339 ||||||||||| ||||| | |||| | ||||||||||| |||| | || |||||| Sbjct: 17373077 gtcttcttccacggcggtgccttcgtgatcgagtcggccttctccacgac-gtaccatgg 17373135 Query: 340 ctacgtcgcgtccctcgctgccgcggccggcgtcgtcgccgtctccgtcgagtaccgcct 399 ||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 17373136 ctacgccgcgtccctcgccgccgcggccggcgtcgtcgccgtctccgtggagtaccgcct 17373195 Query: 400 cgcgcccgagcatccggtgcccgccgcctac 430 |||||| ||||| || || |||||||||||| Sbjct: 17373196 cgcgccggagcaccccgtccccgccgcctac 17373226 Score = 105 bits (53), Expect = 1e-19 Identities = 142/169 (84%), Gaps = 2/169 (1%) Strand = Plus / Plus Query: 263 aagaagctcccgataatcgtcttcttccatggcggcggcttcctcgtcgagtcggccgtc 322 ||||||||||| | ||||||||||||| || |||||||||||| |||||||||||| | Sbjct: 17362964 aagaagctccccgtcctcgtcttcttccacggaggcggcttcctcatcgagtcggccgac 17363023 Query: 323 t-ctcaacagtaccacaactacgtcgcgtccctcgctgccgcggccggcgtcgtcgccgt 381 | ||| || |||||||||||||||| || |||| ||||||||||||||||||| || Sbjct: 17363024 tcctccac-gtaccacaactacgtcaaccccttcgccgccgcggccggcgtcgtcgtggt 17363082 Query: 382 ctccgtcgagtaccgcctcgcgcccgagcatccggtgcccgccgcctac 430 |||||||| ||||||||||| || ||||| ||| |||| || |||||| Sbjct: 17363083 gtccgtcgactaccgcctcgccccggagcacccgctgccggcggcctac 17363131 Score = 73.8 bits (37), Expect = 4e-10 Identities = 121/149 (81%) Strand = Plus / Plus Query: 263 aagaagctcccgataatcgtcttcttccatggcggcggcttcctcgtcgagtcggccgtc 322 ||||||||||| | ||||||||||||| ||||||| ||| || |||||||||||| | Sbjct: 17359894 aagaagctccccgtcgtcgtcttcttccacggcggcgcgttcttcatcgagtcggccggc 17359953 Query: 323 tctcaacagtaccacaactacgtcgcgtccctcgctgccgcggccggcgtcgtcgccgtc 382 || | |||||||||||||||| |||||||| || |||||||| ||| ||| ||| Sbjct: 17359954 tccgagacgtaccacaactacgtcaactccctcgccgcggcggccggtgtcctcgtcgtg 17360013 Query: 383 tccgtcgagtaccgcctcgcgcccgagca 411 |||||||| ||||| ||||| || ||||| Sbjct: 17360014 tccgtcgactaccggctcgccccggagca 17360042 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 379 cgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||||||||||||||||||||||||||||||| Sbjct: 17417181 cgtctccgtcgagtaccgcctcgcgcccgagca 17417149 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 369 gcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 |||||||||||||| ||||| | |||||||||||||||||||| Sbjct: 17092044 gcgtcgtcgccgtcgccgtcaactaccgcctcgcgcccgagca 17092002 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 173 accggcgtcacgtccaaagacgtggtccttggctccgacaccggcatgtgcgtacgcctc 232 ||||||||||| ||||| ||||| ||||| | | ||||||||||| | | ||| |||||| Sbjct: 17359807 accggcgtcacctccaaggacgtcgtcctcgacgccgacaccggcgtctccgtccgcctc 17359866 Query: 233 ttcctcccca 242 |||||||||| Sbjct: 17359867 ttcctcccca 17359876 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 375 tcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 |||| ||||||||||| ||||||||||| |||||||| Sbjct: 17117762 tcgctgtctccgtcgactaccgcctcgctcccgagca 17117726 Score = 48.1 bits (24), Expect = 0.024 Identities = 45/52 (86%) Strand = Plus / Plus Query: 369 gcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagcatccggtgcc 420 ||||||| || || ||||| || |||||||||||||| ||||| |||||||| Sbjct: 17413139 gcgtcgtggcggtgtccgtggactaccgcctcgcgccggagcacccggtgcc 17413190 Score = 46.1 bits (23), Expect = 0.094 Identities = 38/43 (88%) Strand = Plus / Minus Query: 262 aaagaagctcccgataatcgtcttcttccatggcggcggcttc 304 ||||||||||||| | || ||| ||||||||||||||||||| Sbjct: 17417298 aaagaagctcccgctcctcatctacttccatggcggcggcttc 17417256 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 279 tcgtcttcttccatggcggcggcttc 304 |||||||||||||||| ||||||||| Sbjct: 17418095 tcgtcttcttccatggaggcggcttc 17418120 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Plus Query: 374 gtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 |||||||||||| |||| |||||| ||||||| ||||| Sbjct: 15962526 gtcgccgtctccttcgactaccgcgtcgcgccggagca 15962563 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Plus Query: 374 gtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 |||| ||||||||| || ||||||||||| |||||||| Sbjct: 15955379 gtcgtcgtctccgtggactaccgcctcgcccccgagca 15955416 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 gagcggcaagatggaccgcct 132 ||||||||||||||||||||| Sbjct: 17362816 gagcggcaagatggaccgcct 17362836 Score = 40.1 bits (20), Expect = 5.8 Identities = 47/56 (83%) Strand = Plus / Plus Query: 368 ggcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagcatccggtgcccgc 423 |||||| ||| ||| || || ||||||||||||||||| |||| ||||| ||||| Sbjct: 17418184 ggcgtcatcgtcgtttcggtggagtaccgcctcgcgccggagcgcccggtccccgc 17418239
>dbj|AP006849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0054F02 Length = 180651 Score = 161 bits (81), Expect = 2e-36 Identities = 271/331 (81%), Gaps = 5/331 (1%) Strand = Plus / Plus Query: 101 cgcatataccggagcggcaagatggaccgcctctgtcgcccggcgcgtgcgcccaccggc 160 ||||| ||||||||||||||||||||||||||| | || | || |||||| ||||| Sbjct: 96813 cgcatctaccggagcggcaagatggaccgcctccaccatcccgtgcttgcgcctgccggc 96872 Query: 161 ctcgacccgattaccggcgtcacgtccaaagacgtggtccttggctccgacaccggcatg 220 ||||| || ||||||||||||||||| ||||||||| | | | | ||||||||| || Sbjct: 96873 gtcgacgcggccaccggcgtcacgtccaaggacgtggtcgtcgacgctgacaccggcctg 96932 Query: 221 tgcgtacgcctcttcctccccaccagcccagatcacttcgaaaagaagctcccgataatc 280 | ||| ||| ||||||||||| || ||||||||| | | |||||||| || | || Sbjct: 96933 tccgtgcgcgtcttcctccccgcccgcccagatccgtcc---aagaagctacccgtcctc 96989 Query: 281 gtcttcttccatggcggcggcttcctcgtcgagtcggccgtctct-caacagtaccacaa 339 ||||||||||| ||||| | |||| | ||||||||||| |||| | || |||||| Sbjct: 96990 gtcttcttccacggcggtgccttcgtgatcgagtcggccttctccacgac-gtaccatgg 97048 Query: 340 ctacgtcgcgtccctcgctgccgcggccggcgtcgtcgccgtctccgtcgagtaccgcct 399 ||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct: 97049 ctacgccgcgtccctcgccgccgcggccggcgtcgtcgccgtctccgtggagtaccgcct 97108 Query: 400 cgcgcccgagcatccggtgcccgccgcctac 430 |||||| ||||| || || |||||||||||| Sbjct: 97109 cgcgccggagcaccccgtccccgccgcctac 97139 Score = 105 bits (53), Expect = 1e-19 Identities = 142/169 (84%), Gaps = 2/169 (1%) Strand = Plus / Plus Query: 263 aagaagctcccgataatcgtcttcttccatggcggcggcttcctcgtcgagtcggccgtc 322 ||||||||||| | ||||||||||||| || |||||||||||| |||||||||||| | Sbjct: 86877 aagaagctccccgtcctcgtcttcttccacggaggcggcttcctcatcgagtcggccgac 86936 Query: 323 t-ctcaacagtaccacaactacgtcgcgtccctcgctgccgcggccggcgtcgtcgccgt 381 | ||| || |||||||||||||||| || |||| ||||||||||||||||||| || Sbjct: 86937 tcctccac-gtaccacaactacgtcaaccccttcgccgccgcggccggcgtcgtcgtggt 86995 Query: 382 ctccgtcgagtaccgcctcgcgcccgagcatccggtgcccgccgcctac 430 |||||||| ||||||||||| || ||||| ||| |||| || |||||| Sbjct: 86996 gtccgtcgactaccgcctcgccccggagcacccgctgccggcggcctac 87044 Score = 73.8 bits (37), Expect = 4e-10 Identities = 121/149 (81%) Strand = Plus / Plus Query: 263 aagaagctcccgataatcgtcttcttccatggcggcggcttcctcgtcgagtcggccgtc 322 ||||||||||| | ||||||||||||| ||||||| ||| || |||||||||||| | Sbjct: 83807 aagaagctccccgtcgtcgtcttcttccacggcggcgcgttcttcatcgagtcggccggc 83866 Query: 323 tctcaacagtaccacaactacgtcgcgtccctcgctgccgcggccggcgtcgtcgccgtc 382 || | |||||||||||||||| |||||||| || |||||||| ||| ||| ||| Sbjct: 83867 tccgagacgtaccacaactacgtcaactccctcgccgcggcggccggtgtcctcgtcgtg 83926 Query: 383 tccgtcgagtaccgcctcgcgcccgagca 411 |||||||| ||||| ||||| || ||||| Sbjct: 83927 tccgtcgactaccggctcgccccggagca 83955 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 379 cgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||||||||||||||||||||||||||||||| Sbjct: 141094 cgtctccgtcgagtaccgcctcgcgcccgagca 141062 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 173 accggcgtcacgtccaaagacgtggtccttggctccgacaccggcatgtgcgtacgcctc 232 ||||||||||| ||||| ||||| ||||| | | ||||||||||| | | ||| |||||| Sbjct: 83720 accggcgtcacctccaaggacgtcgtcctcgacgccgacaccggcgtctccgtccgcctc 83779 Query: 233 ttcctcccca 242 |||||||||| Sbjct: 83780 ttcctcccca 83789 Score = 48.1 bits (24), Expect = 0.024 Identities = 45/52 (86%) Strand = Plus / Plus Query: 369 gcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagcatccggtgcc 420 ||||||| || || ||||| || |||||||||||||| ||||| |||||||| Sbjct: 137052 gcgtcgtggcggtgtccgtggactaccgcctcgcgccggagcacccggtgcc 137103 Score = 46.1 bits (23), Expect = 0.094 Identities = 38/43 (88%) Strand = Plus / Minus Query: 262 aaagaagctcccgataatcgtcttcttccatggcggcggcttc 304 ||||||||||||| | || ||| ||||||||||||||||||| Sbjct: 141211 aaagaagctcccgctcctcatctacttccatggcggcggcttc 141169 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 279 tcgtcttcttccatggcggcggcttc 304 |||||||||||||||| ||||||||| Sbjct: 142008 tcgtcttcttccatggaggcggcttc 142033 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 gagcggcaagatggaccgcct 132 ||||||||||||||||||||| Sbjct: 86729 gagcggcaagatggaccgcct 86749 Score = 40.1 bits (20), Expect = 5.8 Identities = 47/56 (83%) Strand = Plus / Plus Query: 368 ggcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagcatccggtgcccgc 423 |||||| ||| ||| || || ||||||||||||||||| |||| ||||| ||||| Sbjct: 142097 ggcgtcatcgtcgtttcggtggagtaccgcctcgcgccggagcgcccggtccccgc 142152
>dbj|AK073449.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044C15, full insert sequence Length = 1108 Score = 105 bits (53), Expect = 1e-19 Identities = 130/153 (84%), Gaps = 2/153 (1%) Strand = Plus / Minus Query: 279 tcgtcttcttccatggcggcggcttcctcgtcgagtcggccgtctc-tcaacagtaccac 337 ||||||||||||| || |||||||||||| |||||||||||| ||| || || ||||||| Sbjct: 670 tcgtcttcttccacggaggcggcttcctcatcgagtcggccgactcctccac-gtaccac 612 Query: 338 aactacgtcgcgtccctcgctgccgcggccggcgtcgtcgccgtctccgtcgagtaccgc 397 ||||||||| || |||| ||||||||||||||||||| || |||||||| |||||| Sbjct: 611 aactacgtcaaccccttcgccgccgcggccggcgtcgtcgtggtgtccgtcgactaccgc 552 Query: 398 ctcgcgcccgagcatccggtgcccgccgcctac 430 ||||| || ||||| ||| |||| || |||||| Sbjct: 551 ctcgccccggagcacccgctgccggcggcctac 519 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 gagcggcaagatggaccgcct 132 ||||||||||||||||||||| Sbjct: 834 gagcggcaagatggaccgcct 814
>dbj|AK067180.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094M19, full insert sequence Length = 1117 Score = 105 bits (53), Expect = 1e-19 Identities = 142/169 (84%), Gaps = 2/169 (1%) Strand = Plus / Plus Query: 263 aagaagctcccgataatcgtcttcttccatggcggcggcttcctcgtcgagtcggccgtc 322 ||||||||||| | ||||||||||||| || |||||||||||| |||||||||||| | Sbjct: 276 aagaagctccccgtcctcgtcttcttccacggaggcggcttcctcatcgagtcggccgac 335 Query: 323 t-ctcaacagtaccacaactacgtcgcgtccctcgctgccgcggccggcgtcgtcgccgt 381 | ||| || |||||||||||||||| || |||| ||||||||||||||||||| || Sbjct: 336 tcctccac-gtaccacaactacgtcaaccccttcgccgccgcggccggcgtcgtcgtggt 394 Query: 382 ctccgtcgagtaccgcctcgcgcccgagcatccggtgcccgccgcctac 430 |||||||| ||||||||||| || ||||| ||| |||| || |||||| Sbjct: 395 gtccgtcgactaccgcctcgccccggagcacccgctgccggcggcctac 443 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 gagcggcaagatggaccgcct 132 ||||||||||||||||||||| Sbjct: 128 gagcggcaagatggaccgcct 148
>ref|XM_482926.1| Oryza sativa (japonica cultivar-group), mRNA Length = 990 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Plus Query: 359 gccgcggccggcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagcatccggtg 418 |||||||| |||||||||||||| |||||||| |||||||||||||| ||||| ||| | Sbjct: 304 gccgcggcgggcgtcgtcgccgtgtccgtcgactaccgcctcgcgccggagcacccgctc 363 Query: 419 cccgccgcctac 430 |||||||||||| Sbjct: 364 cccgccgcctac 375
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 359 gccgcggccggcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagcatccggtg 418 |||||||| |||||||||||||| |||||||| |||||||||||||| ||||| ||| | Sbjct: 23402076 gccgcggcgggcgtcgtcgccgtgtccgtcgactaccgcctcgcgccggagcacccgctc 23402017 Query: 419 cccgccgcctac 430 |||||||||||| Sbjct: 23402016 cccgccgcctac 23402005 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 379 cgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||||||||||||||||||||||||| ||||| Sbjct: 23411932 cgtctccgtcgagtaccgcctcgcgccggagca 23411964 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 383 tccgtcgagtaccgcctcgcgcccgagcatccggtgcccgcc 424 |||||||| |||||||||||||||||||| || || |||||| Sbjct: 23410262 tccgtcgactaccgcctcgcgcccgagcaccccgtccccgcc 23410303 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 379 cgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||||| |||| |||||||| ||||||||||| Sbjct: 27467409 cgtctccctcgactaccgccttgcgcccgagca 27467377
>dbj|AP004399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0451G12 Length = 142182 Score = 87.7 bits (44), Expect = 3e-14 Identities = 65/72 (90%) Strand = Plus / Minus Query: 359 gccgcggccggcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagcatccggtg 418 |||||||| |||||||||||||| |||||||| |||||||||||||| ||||| ||| | Sbjct: 83913 gccgcggcgggcgtcgtcgccgtgtccgtcgactaccgcctcgcgccggagcacccgctc 83854 Query: 419 cccgccgcctac 430 |||||||||||| Sbjct: 83853 cccgccgcctac 83842 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 379 cgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||||||||||||||||||||||||| ||||| Sbjct: 93769 cgtctccgtcgagtaccgcctcgcgccggagca 93801 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 383 tccgtcgagtaccgcctcgcgcccgagcatccggtgcccgcc 424 |||||||| |||||||||||||||||||| || || |||||| Sbjct: 92099 tccgtcgactaccgcctcgcgcccgagcaccccgtccccgcc 92140
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 369 gcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagcatccggtgcccgccgc 426 |||||||||| || ||||||||||||||||||||||||||||| ||| | |||||||| Sbjct: 5824689 gcgtcgtcgcggtgtccgtcgagtaccgcctcgcgcccgagcacccgctccccgccgc 5824746 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 367 cggcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||| ||||| |||||||||||| ||||||||||| |||||||| Sbjct: 11429580 cggcgccgtcgtcgtctccgtcgactaccgcctcgcccccgagca 11429624 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 286 cttccatggcggcggcttcctcgtcgagtcggcc 319 |||||| |||||||||||| | |||||||||||| Sbjct: 5824606 cttccacggcggcggcttcatggtcgagtcggcc 5824639
>dbj|AP003458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0701E03 Length = 183245 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 369 gcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagcatccggtgcccgccgc 426 |||||||||| || ||||||||||||||||||||||||||||| ||| | |||||||| Sbjct: 140218 gcgtcgtcgcggtgtccgtcgagtaccgcctcgcgcccgagcacccgctccccgccgc 140275 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 286 cttccatggcggcggcttcctcgtcgagtcggcc 319 |||||| |||||||||||| | |||||||||||| Sbjct: 140135 cttccacggcggcggcttcatggtcgagtcggcc 140168
>dbj|AP003525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0537F07 Length = 147724 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 369 gcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagcatccggtgcccgccgc 426 |||||||||| || ||||||||||||||||||||||||||||| ||| | |||||||| Sbjct: 25464 gcgtcgtcgcggtgtccgtcgagtaccgcctcgcgcccgagcacccgctccccgccgc 25521 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 286 cttccatggcggcggcttcctcgtcgagtcggcc 319 |||||| |||||||||||| | |||||||||||| Sbjct: 25381 cttccacggcggcggcttcatggtcgagtcggcc 25414
>dbj|AK108107.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-B08, full insert sequence Length = 1131 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 369 gcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagcatccggtgcccgccgc 426 |||||||||| || ||||||||||||||||||||||||||||| ||| | |||||||| Sbjct: 376 gcgtcgtcgcggtgtccgtcgagtaccgcctcgcgcccgagcacccgctccccgccgc 433 Score = 44.1 bits (22), Expect = 0.37 Identities = 31/34 (91%) Strand = Plus / Plus Query: 286 cttccatggcggcggcttcctcgtcgagtcggcc 319 |||||| |||||||||||| | |||||||||||| Sbjct: 293 cttccacggcggcggcttcatggtcgagtcggcc 326
>dbj|AK071569.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023102G04, full insert sequence Length = 1519 Score = 73.8 bits (37), Expect = 4e-10 Identities = 121/149 (81%) Strand = Plus / Plus Query: 263 aagaagctcccgataatcgtcttcttccatggcggcggcttcctcgtcgagtcggccgtc 322 ||||||||||| | ||||||||||||| ||||||| ||| || |||||||||||| | Sbjct: 460 aagaagctccccgtcgtcgtcttcttccacggcggcgcgttcttcatcgagtcggccggc 519 Query: 323 tctcaacagtaccacaactacgtcgcgtccctcgctgccgcggccggcgtcgtcgccgtc 382 || | |||||||||||||||| |||||||| || |||||||| ||| ||| ||| Sbjct: 520 tccgagacgtaccacaactacgtcaactccctcgccgcggcggccggtgtcctcgtcgtg 579 Query: 383 tccgtcgagtaccgcctcgcgcccgagca 411 |||||||| ||||| ||||| || ||||| Sbjct: 580 tccgtcgactaccggctcgccccggagca 608 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 173 accggcgtcacgtccaaagacgtggtccttggctccgacaccggcatgtgcgtacgcctc 232 ||||||||||| ||||| ||||| ||||| | | ||||||||||| | | ||| |||||| Sbjct: 373 accggcgtcacctccaaggacgtcgtcctcgacgccgacaccggcgtctccgtccgcctc 432 Query: 233 ttcctcccca 242 |||||||||| Sbjct: 433 ttcctcccca 442
>dbj|AK070294.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050O07, full insert sequence Length = 1333 Score = 73.8 bits (37), Expect = 4e-10 Identities = 121/149 (81%) Strand = Plus / Plus Query: 263 aagaagctcccgataatcgtcttcttccatggcggcggcttcctcgtcgagtcggccgtc 322 ||||||||||| | ||||||||||||| ||||||| ||| || |||||||||||| | Sbjct: 457 aagaagctccccgtcgtcgtcttcttccacggcggcgcgttcttcatcgagtcggccggc 516 Query: 323 tctcaacagtaccacaactacgtcgcgtccctcgctgccgcggccggcgtcgtcgccgtc 382 || | |||||||||||||||| |||||||| || |||||||| ||| ||| ||| Sbjct: 517 tccgagacgtaccacaactacgtcaactccctcgccgcggcggccggtgtcctcgtcgtg 576 Query: 383 tccgtcgagtaccgcctcgcgcccgagca 411 |||||||| ||||| ||||| || ||||| Sbjct: 577 tccgtcgactaccggctcgccccggagca 605 Score = 60.0 bits (30), Expect = 6e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 173 accggcgtcacgtccaaagacgtggtccttggctccgacaccggcatgtgcgtacgcctc 232 ||||||||||| ||||| ||||| ||||| | | ||||||||||| | | ||| |||||| Sbjct: 370 accggcgtcacctccaaggacgtcgtcctcgacgccgacaccggcgtctccgtccgcctc 429 Query: 233 ttcctcccca 242 |||||||||| Sbjct: 430 ttcctcccca 439
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 365 gccggcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagcatccggtgcccgc 423 ||||||| | ||| ||| ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 20395764 gccggcgccctcgtcgtgtccgtcgagtaccgcctcgcgccagagcatcccgtgcccgc 20395822 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 383 tccgtcgagtaccgcctcgcgcccgagcatccggtgcccgc 423 ||||||||||||||||||||||||||||| || |||||||| Sbjct: 20546268 tccgtcgagtaccgcctcgcgcccgagcaccccgtgcccgc 20546228 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 368 ggcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 |||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 26743440 ggcgtcgtcgtcgtctccgtcaactaccgcctcgcgcccgagca 26743397 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 366 ccggcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagcatcc 414 |||||| | ||| ||| ||||||||||||||||||||||| |||||||| Sbjct: 20431812 ccggcgccctcgtcgtgtccgtcgagtaccgcctcgcgccggagcatcc 20431860 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 383 tccgtcgagtaccgcctcgcgcccgagcatcc 414 ||||||||||||||||||||||| |||||||| Sbjct: 20543754 tccgtcgagtaccgcctcgcgccggagcatcc 20543723 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 383 tccgtcgagtaccgcctcgcgcccgagca 411 ||||||||||||||||||||||| ||||| Sbjct: 20470565 tccgtcgagtaccgcctcgcgccggagca 20470593 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 379 cgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||||||| ||||||||||||||||| ||||| Sbjct: 18840252 cgtctccgtggagtaccgcctcgcgccggagca 18840284 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Minus Query: 373 cgtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||| ||| |||||||| ||||||||||| |||||||| Sbjct: 26740562 cgtcgtcgtgtccgtcgactaccgcctcgcccccgagca 26740524 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Minus Query: 373 cgtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||| |||||||||| | ||||||||||| |||||||| Sbjct: 26738035 cgtcgtcgtctccgtcaactaccgcctcgcccccgagca 26737997 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 279 tcgtcttcttccatggcggcggcttc 304 ||||||||||||| |||||||||||| Sbjct: 26726780 tcgtcttcttccacggcggcggcttc 26726805 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 383 tccgtcgagtaccgcctcgcgcccgagca 411 |||||||| | |||||||||||||||||| Sbjct: 24878685 tccgtcgacttccgcctcgcgcccgagca 24878713 Score = 40.1 bits (20), Expect = 5.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 265 gaagctcccgataatcgtcttcttccatggcggcggcttc 304 |||||||||| | |||||| |||||| |||||||||||| Sbjct: 26730646 gaagctcccggtcgtcgtctacttccacggcggcggcttc 26730607 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 gcgtacgcctcttcctcccc 241 |||||||||||||||||||| Sbjct: 21347921 gcgtacgcctcttcctcccc 21347902 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 374 gtcgccgtctccgtcgagtaccgcctcgcgcc 405 ||||||||| |||||| || |||||||||||| Sbjct: 14732944 gtcgccgtcgccgtcgcgtcccgcctcgcgcc 14732975 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cgtcgtcgccgtctccgtcg 389 |||||||||||||||||||| Sbjct: 1020560 cgtcgtcgccgtctccgtcg 1020541
>dbj|AP004573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0678G09 Length = 139220 Score = 69.9 bits (35), Expect = 6e-09 Identities = 53/59 (89%) Strand = Plus / Plus Query: 365 gccggcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagcatccggtgcccgc 423 ||||||| | ||| ||| ||||||||||||||||||||||| |||||||| |||||||| Sbjct: 104664 gccggcgccctcgtcgtgtccgtcgagtaccgcctcgcgccagagcatcccgtgcccgc 104722
>ref|XM_478487.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1320 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 383 tccgtcgagtaccgcctcgcgcccgagcatccggtgcccgc 423 ||||||||||||||||||||||||||||| || |||||||| Sbjct: 358 tccgtcgagtaccgcctcgcgcccgagcaccccgtgcccgc 398
>dbj|AP005169.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0077J18 Length = 180944 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 383 tccgtcgagtaccgcctcgcgcccgagcatccggtgcccgc 423 ||||||||||||||||||||||||||||| || |||||||| Sbjct: 127378 tccgtcgagtaccgcctcgcgcccgagcaccccgtgcccgc 127338 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 366 ccggcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagcatcc 414 |||||| | ||| ||| ||||||||||||||||||||||| |||||||| Sbjct: 12922 ccggcgccctcgtcgtgtccgtcgagtaccgcctcgcgccggagcatcc 12970 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 383 tccgtcgagtaccgcctcgcgcccgagcatcc 414 ||||||||||||||||||||||| |||||||| Sbjct: 124864 tccgtcgagtaccgcctcgcgccggagcatcc 124833 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 383 tccgtcgagtaccgcctcgcgcccgagca 411 ||||||||||||||||||||||| ||||| Sbjct: 51675 tccgtcgagtaccgcctcgcgccggagca 51703
>dbj|AP004990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0007H12 Length = 150881 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 383 tccgtcgagtaccgcctcgcgcccgagcatccggtgcccgc 423 ||||||||||||||||||||||||||||| || |||||||| Sbjct: 37347 tccgtcgagtaccgcctcgcgcccgagcaccccgtgcccgc 37307 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 383 tccgtcgagtaccgcctcgcgcccgagcatcc 414 ||||||||||||||||||||||| |||||||| Sbjct: 34833 tccgtcgagtaccgcctcgcgccggagcatcc 34802
>dbj|AK064734.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-C05, full insert sequence Length = 1162 Score = 65.9 bits (33), Expect = 1e-07 Identities = 33/33 (100%) Strand = Plus / Plus Query: 379 cgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||||||||||||||||||||||||||||||| Sbjct: 378 cgtctccgtcgagtaccgcctcgcgcccgagca 410 Score = 46.1 bits (23), Expect = 0.094 Identities = 38/43 (88%) Strand = Plus / Plus Query: 262 aaagaagctcccgataatcgtcttcttccatggcggcggcttc 304 ||||||||||||| | || ||| ||||||||||||||||||| Sbjct: 261 aaagaagctcccgctcctcatctacttccatggcggcggcttc 303
>ref|XM_479314.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1320 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 368 ggcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 |||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 493 ggcgtcgtcgtcgtctccgtcaactaccgcctcgcgcccgagca 536
>dbj|AP003765.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1003_C06 Length = 143168 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 368 ggcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 |||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 90297 ggcgtcgtcgtcgtctccgtcaactaccgcctcgcgcccgagca 90254 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Minus Query: 373 cgtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||| ||| |||||||| ||||||||||| |||||||| Sbjct: 87419 cgtcgtcgtgtccgtcgactaccgcctcgcccccgagca 87381 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Minus Query: 373 cgtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||| |||||||||| | ||||||||||| |||||||| Sbjct: 84892 cgtcgtcgtctccgtcaactaccgcctcgcccccgagca 84854 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 279 tcgtcttcttccatggcggcggcttc 304 ||||||||||||| |||||||||||| Sbjct: 73637 tcgtcttcttccacggcggcggcttc 73662 Score = 40.1 bits (20), Expect = 5.8 Identities = 35/40 (87%) Strand = Plus / Minus Query: 265 gaagctcccgataatcgtcttcttccatggcggcggcttc 304 |||||||||| | |||||| |||||| |||||||||||| Sbjct: 77503 gaagctcccggtcgtcgtctacttccacggcggcggcttc 77464
>dbj|AK109637.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-E04, full insert sequence Length = 1320 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 368 ggcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 |||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 493 ggcgtcgtcgtcgtctccgtcaactaccgcctcgcgcccgagca 536
>dbj|AP006057.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1342C04 Length = 172097 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 369 gcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 |||||||||||||| ||||| | |||||||||||||||||||| Sbjct: 32801 gcgtcgtcgccgtcgccgtcaactaccgcctcgcgcccgagca 32759 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 375 tcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 |||| ||||||||||| ||||||||||| |||||||| Sbjct: 58519 tcgctgtctccgtcgactaccgcctcgctcccgagca 58483
>dbj|AP005655.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0025H07 Length = 145605 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Minus Query: 369 gcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 |||||||||||||| ||||| | |||||||||||||||||||| Sbjct: 85703 gcgtcgtcgccgtcgccgtcaactaccgcctcgcgcccgagca 85661 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Minus Query: 375 tcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 |||| ||||||||||| ||||||||||| |||||||| Sbjct: 111421 tcgctgtctccgtcgactaccgcctcgctcccgagca 111385
>dbj|AK065686.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013042H09, full insert sequence Length = 1283 Score = 61.9 bits (31), Expect = 2e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 369 gcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 |||||||||||||| ||||| | |||||||||||||||||||| Sbjct: 366 gcgtcgtcgccgtcgccgtcaactaccgcctcgcgcccgagca 408
>ref|XM_482929.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1377 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 379 cgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||||||||||||||||||||||||| ||||| Sbjct: 433 cgtctccgtcgagtaccgcctcgcgccggagca 465
>ref|XM_507269.1| PREDICTED Oryza sativa (japonica cultivar-group), P0451G12.24 mRNA Length = 1426 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 379 cgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||||||||||||||||||||||||| ||||| Sbjct: 435 cgtctccgtcgagtaccgcctcgcgccggagca 467
>ref|XM_466311.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1251 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 379 cgtctccgtcgagtaccgcctcgcgcccgagca 411 |||||||||||| |||||||||||||||||||| Sbjct: 459 cgtctccgtcgactaccgcctcgcgcccgagca 491
>ref|XM_478470.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1320 Score = 58.0 bits (29), Expect = 2e-05 Identities = 44/49 (89%) Strand = Plus / Plus Query: 366 ccggcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagcatcc 414 |||||| | ||| ||| ||||||||||||||||||||||| |||||||| Sbjct: 365 ccggcgccctcgtcgtgtccgtcgagtaccgcctcgcgccggagcatcc 413
>gb|BT018514.1| Zea mays clone EL01N0430E04.d mRNA sequence Length = 1271 Score = 58.0 bits (29), Expect = 2e-05 Identities = 35/37 (94%) Strand = Plus / Plus Query: 375 tcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 |||||||||||||||| |||||||| ||||||||||| Sbjct: 406 tcgccgtctccgtcgactaccgcctggcgcccgagca 442
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 379 cgtctccgtcgagtaccgcctcgcgcccgagca 411 |||||||||||| |||||||||||||||||||| Sbjct: 21607618 cgtctccgtcgactaccgcctcgcgcccgagca 21607650 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cgtcgtcgccgtctccgtcg 389 |||||||||||||||||||| Sbjct: 6803382 cgtcgtcgccgtctccgtcg 6803401
>dbj|AP006068.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020D05 Length = 158760 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 379 cgtctccgtcgagtaccgcctcgcgcccgagca 411 |||||||||||| |||||||||||||||||||| Sbjct: 96568 cgtctccgtcgactaccgcctcgcgcccgagca 96600
>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1386G10 Length = 121827 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 367 cggcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||| ||||| |||||||||||| ||||||||||| |||||||| Sbjct: 117289 cggcgccgtcgtcgtctccgtcgactaccgcctcgcccccgagca 117333
>dbj|AP004154.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_E05 Length = 126978 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 379 cgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||||||||||||||||||||||||| ||||| Sbjct: 3347 cgtctccgtcgagtaccgcctcgcgccggagca 3379 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 383 tccgtcgagtaccgcctcgcgcccgagcatccggtgcccgcc 424 |||||||| |||||||||||||||||||| || || |||||| Sbjct: 1677 tccgtcgactaccgcctcgcgcccgagcaccccgtccccgcc 1718
>dbj|AK106075.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-H11, full insert sequence Length = 1312 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 367 cggcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||| ||||| |||||||||||| ||||||||||| |||||||| Sbjct: 445 cggcgccgtcgtcgtctccgtcgactaccgcctcgcccccgagca 489
>dbj|AK105793.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H09, full insert sequence Length = 1251 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 379 cgtctccgtcgagtaccgcctcgcgcccgagca 411 |||||||||||| |||||||||||||||||||| Sbjct: 459 cgtctccgtcgactaccgcctcgcgcccgagca 491
>dbj|AK099262.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004G05, full insert sequence Length = 1371 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 367 cggcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||| ||||| |||||||||||| ||||||||||| |||||||| Sbjct: 457 cggcgccgtcgtcgtctccgtcgactaccgcctcgcccccgagca 501
>dbj|AK073975.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033072F03, full insert sequence Length = 1377 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 379 cgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||||||||||||||||||||||||| ||||| Sbjct: 433 cgtctccgtcgagtaccgcctcgcgccggagca 465
>dbj|AK070763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023066M03, full insert sequence Length = 1378 Score = 58.0 bits (29), Expect = 2e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 367 cggcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||| ||||| |||||||||||| ||||||||||| |||||||| Sbjct: 482 cggcgccgtcgtcgtctccgtcgactaccgcctcgcccccgagca 526
>dbj|AK060706.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-H02, full insert sequence Length = 1426 Score = 58.0 bits (29), Expect = 2e-05 Identities = 32/33 (96%) Strand = Plus / Plus Query: 379 cgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||||||||||||||||||||||||| ||||| Sbjct: 435 cgtctccgtcgagtaccgcctcgcgccggagca 467
>gb|AY496577.1| Uncultured bacterium clone pELP11B oxidoreductase gene, partial cds; and lipase/esterase gene, complete cds Length = 1562 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 387 tcgagtaccgcctcgcgcccgagcatccggtgcccgccgc 426 |||| |||||||||||||||||||||||| | |||||||| Sbjct: 920 tcgactaccgcctcgcgcccgagcatccgtttcccgccgc 959
>ref|XM_462670.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 954 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 373 cgtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 |||||||||||||||||| ||||||||||| || ||||| Sbjct: 330 cgtcgccgtctccgtcgactaccgcctcgccccggagca 368
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 373 cgtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 |||||||||||||||||| ||||||||||| || ||||| Sbjct: 22386882 cgtcgccgtctccgtcgactaccgcctcgccccggagca 22386920
>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22, complete sequence Length = 147214 Score = 54.0 bits (27), Expect = 4e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 373 cgtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 |||||||||||||||||| ||||||||||| || ||||| Sbjct: 137786 cgtcgccgtctccgtcgactaccgcctcgccccggagca 137824
>ref|XM_482928.1| Oryza sativa (japonica cultivar-group), mRNA Length = 963 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 383 tccgtcgagtaccgcctcgcgcccgagcatccggtgcccgcc 424 |||||||| |||||||||||||||||||| || || |||||| Sbjct: 331 tccgtcgactaccgcctcgcgcccgagcaccccgtccccgcc 372
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 382 ctccgtcgagtaccgcctcgcgcccgagca 411 ||||||||| |||||||||||||||||||| Sbjct: 7983085 ctccgtcgactaccgcctcgcgcccgagca 7983056
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 382 ctccgtcgagtaccgcctcgcgcccgagca 411 ||||||||| |||||||||||||||||||| Sbjct: 7980920 ctccgtcgactaccgcctcgcgcccgagca 7980891
>gb|AC134240.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0081I10, complete sequence Length = 143298 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 382 ctccgtcgagtaccgcctcgcgcccgagca 411 ||||||||| |||||||||||||||||||| Sbjct: 50448 ctccgtcgactaccgcctcgcgcccgagca 50419
>ref|NM_197696.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBb0014I11.15), mRNA Length = 816 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 379 cgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||||| |||| |||||||||||||||||||| Sbjct: 540 cgtctccctcgactaccgcctcgcgcccgagca 572
>ref|XM_478476.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1621 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 383 tccgtcgagtaccgcctcgcgcccgagca 411 ||||||||||||||||||||||| ||||| Sbjct: 409 tccgtcgagtaccgcctcgcgccggagca 437
>ref|XM_478255.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1347 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 379 cgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||||||| ||||||||||||||||| ||||| Sbjct: 390 cgtctccgtggagtaccgcctcgcgccggagca 422
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete sequence Length = 135510 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 379 cgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||||| |||| |||||||||||||||||||| Sbjct: 30112 cgtctccctcgactaccgcctcgcgcccgagca 30080
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 379 cgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||||| |||| |||||||||||||||||||| Sbjct: 21304247 cgtctccctcgactaccgcctcgcgcccgagca 21304279
>gb|AY496576.1| Uncultured bacterium clone pELP45 oxidoreductase gene, partial cds; and lipase/esterase gene, complete cds Length = 1325 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 387 tcgagtaccgcctcgcgcccgagcatccg 415 |||| |||||||||||||||||||||||| Sbjct: 683 tcgactaccgcctcgcgcccgagcatccg 711
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 385 cgtcgagtaccgcctcgcgcccgagcatc 413 |||||||||||| |||||||||||||||| Sbjct: 3586550 cgtcgagtaccggctcgcgcccgagcatc 3586578 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 379 cgtctccgtcgagtaccgcctcgcgcccgagca 411 |||||| ||||| ||||||| |||||||||||| Sbjct: 4248079 cgtctcggtcgactaccgccgcgcgcccgagca 4248047 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 392 taccgcctcgcgcccgagcatccggtgcccgccgcc 427 |||||||| || |||||||||||| | ||||||||| Sbjct: 2292443 taccgcctggcccccgagcatccgttccccgccgcc 2292478
>dbj|AP003995.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1112_F06 Length = 104419 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 379 cgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||||||| ||||||||||||||||| ||||| Sbjct: 40438 cgtctccgtggagtaccgcctcgcgccggagca 40470
>dbj|AK109058.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-E12, full insert sequence Length = 1621 Score = 50.1 bits (25), Expect = 0.006 Identities = 28/29 (96%) Strand = Plus / Plus Query: 383 tccgtcgagtaccgcctcgcgcccgagca 411 ||||||||||||||||||||||| ||||| Sbjct: 409 tccgtcgagtaccgcctcgcgccggagca 437
>dbj|AK061010.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-A12, full insert sequence Length = 1083 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 375 tcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 |||| ||||||||||| ||||||||||| |||||||| Sbjct: 403 tcgctgtctccgtcgactaccgcctcgctcccgagca 439
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 50.1 bits (25), Expect = 0.006 Identities = 34/37 (91%) Strand = Plus / Plus Query: 379 cgtctccgtcgagtaccgcctcgcgcccgagcatccg 415 ||||||||| | ||||||||||||||| ||||||||| Sbjct: 427654 cgtctccgttgcgtaccgcctcgcgccggagcatccg 427690
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Plus Query: 379 cgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||||| |||| |||||||||||||||||||| Sbjct: 21315511 cgtctccctcgactaccgcctcgcgcccgagca 21315543
>dbj|AK120686.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013168D07, full insert sequence Length = 2304 Score = 48.1 bits (24), Expect = 0.024 Identities = 45/52 (86%) Strand = Plus / Plus Query: 369 gcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagcatccggtgcc 420 ||||||| || || ||||| || |||||||||||||| ||||| |||||||| Sbjct: 668 gcgtcgtggcggtgtccgtggactaccgcctcgcgccggagcacccggtgcc 719
>dbj|AK105811.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-C02, full insert sequence Length = 1522 Score = 48.1 bits (24), Expect = 0.024 Identities = 45/52 (86%) Strand = Plus / Plus Query: 369 gcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagcatccggtgcc 420 ||||||| || || ||||| || |||||||||||||| ||||| |||||||| Sbjct: 672 gcgtcgtggcggtgtccgtggactaccgcctcgcgccggagcacccggtgcc 723
>dbj|AK068197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013140N02, full insert sequence Length = 4012 Score = 48.1 bits (24), Expect = 0.024 Identities = 45/52 (86%) Strand = Plus / Plus Query: 369 gcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagcatccggtgcc 420 ||||||| || || ||||| || |||||||||||||| ||||| |||||||| Sbjct: 2990 gcgtcgtggcggtgtccgtggactaccgcctcgcgccggagcacccggtgcc 3041
>dbj|AK063390.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-H01, full insert sequence Length = 1576 Score = 48.1 bits (24), Expect = 0.024 Identities = 45/52 (86%) Strand = Plus / Minus Query: 369 gcgtcgtcgccgtctccgtcgagtaccgcctcgcgcccgagcatccggtgcc 420 ||||||| || || ||||| || |||||||||||||| ||||| |||||||| Sbjct: 699 gcgtcgtggcggtgtccgtggactaccgcctcgcgccggagcacccggtgcc 648
>gb|AY623658.2| Aeromicrobium erythreum putative transcriptional repressor and putative dehydrogenase/reductase genes, complete cds; erythromycin biosynthesis gene cluster, complete sequence; putative oxidoreductase and LipN genes, complete cds; monoamine oxidase gene, partial cds; and unknown gene Length = 61845 Score = 48.1 bits (24), Expect = 0.024 Identities = 30/32 (93%) Strand = Plus / Plus Query: 380 gtctccgtcgagtaccgcctcgcgcccgagca 411 ||||||||||| ||||||||||| |||||||| Sbjct: 60173 gtctccgtcgactaccgcctcgcccccgagca 60204
>ref|NM_188844.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1041 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Plus Query: 373 cgtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||| ||| |||||||| ||||||||||| |||||||| Sbjct: 351 cgtcgtcgtgtccgtcgactaccgcctcgcccccgagca 389
>ref|NM_188843.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1165 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Plus Query: 373 cgtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||| |||||||||| | ||||||||||| |||||||| Sbjct: 420 cgtcgtcgtctccgtcaactaccgcctcgcccccgagca 458
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 359 gccgcggccggcgtcgtcgccgt 381 ||||||||||||||||||||||| Sbjct: 2314241 gccgcggccggcgtcgtcgccgt 2314219
>gb|AF223647.1| Uncultured bacterium plasmid pAH116 esterase gene, complete cds Length = 1478 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Plus Query: 385 cgtcgagtaccgcctcgcgcccgagcatccg 415 |||||| ||||| |||||||||||||||||| Sbjct: 550 cgtcgactaccggctcgcgcccgagcatccg 580
>emb|BX842578.1| Mycobacterium tuberculosis H37Rv complete genome; segment 7/13 Length = 346186 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 359 gccgcggccggcgtcgtcgccgt 381 ||||||||||||||||||||||| Sbjct: 233205 gccgcggccggcgtcgtcgccgt 233183
>emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 8/14 Length = 306050 Score = 46.1 bits (23), Expect = 0.094 Identities = 23/23 (100%) Strand = Plus / Minus Query: 359 gccgcggccggcgtcgtcgccgt 381 ||||||||||||||||||||||| Sbjct: 90821 gccgcggccggcgtcgtcgccgt 90799
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 46.1 bits (23), Expect = 0.094 Identities = 29/31 (93%) Strand = Plus / Minus Query: 381 tctccgtcgagtaccgcctcgcgcccgagca 411 |||| ||||| |||||||||||||||||||| Sbjct: 4725824 tctcggtcgactaccgcctcgcgcccgagca 4725794 Score = 46.1 bits (23), Expect = 0.094 Identities = 26/27 (96%) Strand = Plus / Plus Query: 364 ggccggcgtcgtcgccgtctccgtcga 390 |||||||| |||||||||||||||||| Sbjct: 1220479 ggccggcggcgtcgccgtctccgtcga 1220505 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 cgcggccggcgtcgtcgccg 380 |||||||||||||||||||| Sbjct: 7629219 cgcggccggcgtcgtcgccg 7629238 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 286 cttccatggcggcggcttcc 305 |||||||||||||||||||| Sbjct: 529852 cttccatggcggcggcttcc 529833 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 380 gtctccgtcgagtaccgcctcgcgcccgagca 411 ||||| ||||| |||||||||||||| ||||| Sbjct: 226932 gtctcggtcgattaccgcctcgcgccggagca 226963
>dbj|AK109437.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-B02, full insert sequence Length = 1171 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Plus Query: 373 cgtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||| |||||||||| | ||||||||||| |||||||| Sbjct: 426 cgtcgtcgtctccgtcaactaccgcctcgcccccgagca 464
>dbj|AK111373.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-182-A08, full insert sequence Length = 1139 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Minus Query: 373 cgtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||| |||||||||| | ||||||||||| |||||||| Sbjct: 640 cgtcgtcgtctccgtcaactaccgcctcgcccccgagca 602
>dbj|AK061012.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-B04, full insert sequence Length = 1165 Score = 46.1 bits (23), Expect = 0.094 Identities = 35/39 (89%) Strand = Plus / Plus Query: 373 cgtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||| |||||||||| | ||||||||||| |||||||| Sbjct: 420 cgtcgtcgtctccgtcaactaccgcctcgcccccgagca 458
>ref|XM_479313.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1044 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 279 tcgtcttcttccatggcggcggcttc 304 ||||||||||||| |||||||||||| Sbjct: 272 tcgtcttcttccacggcggcggcttc 297
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16 Length = 348642 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 384 ccgtcgagtaccgcctcgcgcccgagcatc 413 ||||||||||||| ||||||||||| |||| Sbjct: 223110 ccgtcgagtaccggctcgcgcccgaacatc 223139
>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14 Length = 347894 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 384 ccgtcgagtaccgcctcgcgcccgagcatc 413 ||||||||||||| ||||||||||| |||| Sbjct: 239073 ccgtcgagtaccggctcgcgcccgaacatc 239102
>dbj|AP005565.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1238_G07 Length = 78304 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Plus Query: 374 gtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 |||||||||||| |||| |||||| ||||||| ||||| Sbjct: 33239 gtcgccgtctccttcgactaccgcgtcgcgccggagca 33276 Score = 44.1 bits (22), Expect = 0.37 Identities = 34/38 (89%) Strand = Plus / Plus Query: 374 gtcgccgtctccgtcgagtaccgcctcgcgcccgagca 411 |||| ||||||||| || ||||||||||| |||||||| Sbjct: 26092 gtcgtcgtctccgtggactaccgcctcgcccccgagca 26129
>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0524G08 Length = 146690 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 279 tcgtcttcttccatggcggcggcttc 304 ||||||||||||| |||||||||||| Sbjct: 144384 tcgtcttcttccacggcggcggcttc 144409
>ref|XM_483651.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1296 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 379 cgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||||| |||| |||||||| ||||||||||| Sbjct: 392 cgtctccctcgactaccgccttgcgcccgagca 424
>ref|NM_190263.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1692 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 365 gccggcgtcgtcgccgtctccgtcgagta 393 |||| ||||||||||||| |||||||||| Sbjct: 1253 gccgccgtcgtcgccgtcgccgtcgagta 1225
>gb|AY261359.1| Bovine herpesvirus 5 strain SV507/99, complete genome Length = 138390 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 369 gcgtcgtcgccgtctccgtcg 389 ||||||||||||||||||||| Sbjct: 68959 gcgtcgtcgccgtctccgtcg 68979
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 387 tcgagtaccgcctcgcgcccgagca 411 |||| |||||||||||||||||||| Sbjct: 440828 tcgactaccgcctcgcgcccgagca 440852
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12 Length = 348934 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 384 ccgtcgagtaccgcctcgcgcccga 408 ||||||||||||| ||||||||||| Sbjct: 136004 ccgtcgagtaccggctcgcgcccga 135980
>emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genome; segment 4/16 Length = 348942 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 354 tcgctgccgcggccggcgtcgtcgccgtc 382 |||||||||||||||| |||| ||||||| Sbjct: 247705 tcgctgccgcggccggtgtcgacgccgtc 247733
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 52 ggtgatggattccggcgccga 72 ||||||||||||||||||||| Sbjct: 4403301 ggtgatggattccggcgccga 4403321
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 364 ggccggcgtcgtcgccgtctccgtc 388 |||||||||| |||||||||||||| Sbjct: 531195 ggccggcgtcctcgccgtctccgtc 531219
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 365 gccggcgtcgtcgccgtctccgtcgagta 393 |||| ||||||||||||| |||||||||| Sbjct: 38943127 gccgccgtcgtcgccgtcgccgtcgagta 38943099
>dbj|AP006458.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0072I06 Length = 162411 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 383 tccgtcgagtaccgcctcgcgcccgagca 411 |||||||| | |||||||||||||||||| Sbjct: 62317 tccgtcgacttccgcctcgcgcccgagca 62345
>gb|AC004221.2|AC004221 Homo sapiens DNA from chromosome 19, cosmid R29144 (LLNLR-252D12) and overlapping PCR product, complete sequence Length = 42805 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 128 cgcctctgtcgcccggcgcgtgcgc 152 |||||| |||||||||||||||||| Sbjct: 3805 cgcctccgtcgcccggcgcgtgcgc 3829
>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0674H09 Length = 142955 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 365 gccggcgtcgtcgccgtctccgtcgagta 393 |||| ||||||||||||| |||||||||| Sbjct: 16760 gccgccgtcgtcgccgtcgccgtcgagta 16732
>gb|AY496578.1| Uncultured bacterium clone pELP141 putative oxidoreductase and lipase/esterase genes, complete cds Length = 2219 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 398 ctcgcgcccgagcatccggtgcccgccgc 426 |||||||||||||||||| | |||||||| Sbjct: 1418 ctcgcgcccgagcatccgtttcccgccgc 1446
>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696G06 Length = 142571 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 365 gccggcgtcgtcgccgtctccgtcgagta 393 |||| ||||||||||||| |||||||||| Sbjct: 107913 gccgccgtcgtcgccgtcgccgtcgagta 107885
>dbj|AP005193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0493C06 Length = 158923 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 383 tccgtcgagtaccgcctcgcgcccgagca 411 |||||||| | |||||||||||||||||| Sbjct: 113136 tccgtcgacttccgcctcgcgcccgagca 113164
>dbj|AP004704.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0544G09 Length = 137481 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 379 cgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||||| |||| |||||||| ||||||||||| Sbjct: 94204 cgtctccctcgactaccgccttgcgcccgagca 94172
>dbj|AP006265.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1112_E06 Length = 95069 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 379 cgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||||| |||| |||||||| ||||||||||| Sbjct: 30658 cgtctccctcgactaccgccttgcgcccgagca 30626
>dbj|AK109579.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-A03, full insert sequence Length = 1204 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Plus Query: 383 tccgtcgagtaccgcctcgcgcccgagca 411 |||||||| | |||||||||||||||||| Sbjct: 450 tccgtcgacttccgcctcgcgcccgagca 478
>dbj|AK106054.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-F06, full insert sequence Length = 1297 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Plus Query: 379 cgtctccgtcgagtaccgcctcgcgcccgagca 411 ||||||| |||| |||||||| ||||||||||| Sbjct: 392 cgtctccctcgactaccgccttgcgcccgagca 424
>dbj|AK105622.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-C07, full insert sequence Length = 1188 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 365 gccggcgtcgtcgccgtctccgtcgagta 393 |||| ||||||||||||| |||||||||| Sbjct: 577 gccgccgtcgtcgccgtcgccgtcgagta 549
>ref|NM_111420.1| Arabidopsis thaliana actin binding AT3G05470 mRNA, complete cds Length = 2655 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 364 ggccggcgtcgtcgccgtctccgt 387 |||||||| ||||||||||||||| Sbjct: 290 ggccggcgccgtcgccgtctccgt 313
>ref|XM_464704.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1890 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cgtcgtcgccgtctccgtcg 389 |||||||||||||||||||| Sbjct: 737 cgtcgtcgccgtctccgtcg 718
>ref|XM_464705.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1479 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cgtcgtcgccgtctccgtcg 389 |||||||||||||||||||| Sbjct: 326 cgtcgtcgccgtctccgtcg 307
>ref|XM_506761.1| PREDICTED Oryza sativa (japonica cultivar-group), B1131G07.28-2 mRNA Length = 1529 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cgtcgtcgccgtctccgtcg 389 |||||||||||||||||||| Sbjct: 356 cgtcgtcgccgtctccgtcg 337
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 ctcgctgccgcggccggcgt 372 |||||||||||||||||||| Sbjct: 698735 ctcgctgccgcggccggcgt 698716 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 284 ttcttccatggcggcggcttcctcgtcg 311 ||||| ||||||||||||||| |||||| Sbjct: 688580 ttctttcatggcggcggcttcgtcgtcg 688607
>ref|NM_188838.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1684 Score = 40.1 bits (20), Expect = 5.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 265 gaagctcccgataatcgtcttcttccatggcggcggcttc 304 |||||||||| | |||||| |||||| |||||||||||| Sbjct: 338 gaagctcccggtcgtcgtctacttccacggcggcggcttc 377
>ref|XM_478596.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1980 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 gcgtacgcctcttcctcccc 241 |||||||||||||||||||| Sbjct: 259 gcgtacgcctcttcctcccc 278
>ref|XM_476419.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2974 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cgtcgtcgccgtctccgtcg 389 |||||||||||||||||||| Sbjct: 55 cgtcgtcgccgtctccgtcg 74
>gb|AF172282.1| Oryza sativa adh1-adh2 region Length = 339485 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 cgctgccgcggccggcgtcg 374 |||||||||||||||||||| Sbjct: 292960 cgctgccgcggccggcgtcg 292941
>gb|BT017391.1| Zea mays clone EL01N0327F05.c mRNA sequence Length = 1246 Score = 40.1 bits (20), Expect = 5.8 Identities = 41/48 (85%) Strand = Plus / Plus Query: 264 agaagctcccgataatcgtcttcttccatggcggcggcttcctcgtcg 311 ||||||||||| | | |||| |||||| |||||||||||| |||||| Sbjct: 288 agaagctcccggtgctggtctacttccacggcggcggcttcatcgtcg 335
>ref|XM_359910.1| Magnaporthe grisea 70-15 hypothetical protein (MG04867.4) partial mRNA Length = 1110 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 392 taccgcctcgcgcccgagca 411 |||||||||||||||||||| Sbjct: 481 taccgcctcgcgcccgagca 500
>ref|XM_959430.1| Neurospora crassa OR74A hypothetical protein (NCU02164.1) partial mRNA Length = 1650 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 ccaccggcctcgacccgattaccg 176 |||||||||||||||| ||||||| Sbjct: 158 ccaccggcctcgaccccattaccg 181
>ref|XM_329353.1| Neurospora crassa OR74A hypothetical protein (NCU02164.1) partial mRNA Length = 1650 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 153 ccaccggcctcgacccgattaccg 176 |||||||||||||||| ||||||| Sbjct: 158 ccaccggcctcgaccccattaccg 181
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 395 cgcctcgcgcccgagcatccggtg 418 ||||| |||||||||||||||||| Sbjct: 1597203 cgcctagcgcccgagcatccggtg 1597226
>gb|AC123523.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0051P13, complete sequence Length = 142241 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cgctgccgcggccggcgtcg 374 |||||||||||||||||||| Sbjct: 43164 cgctgccgcggccggcgtcg 43183
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 cggcgccgacgaggtagtgttcga 87 |||||||||||||| ||||||||| Sbjct: 1004988 cggcgccgacgaggaagtgttcga 1005011
>gb|AY386265.1| Bovine papular stomatitis virus strain BV-AR02, complete genome Length = 134431 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 192 acgtggtccttggctccgacaccg 215 |||||||| ||||||||||||||| Sbjct: 120521 acgtggtcgttggctccgacaccg 120544
>emb|AL591790.1|SME591790 Sinorhizobium meliloti 1021 complete chromosome; segment 9/12 Length = 323450 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 tccatggcggcggcttcctcgtcg 311 ||||||||||||||||| |||||| Sbjct: 65447 tccatggcggcggcttcgtcgtcg 65424
>emb|AL591787.1|SME591787 Sinorhizobium meliloti 1021 complete chromosome; segment 6/12 Length = 329100 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 ggcggcggcttcctcgtcga 312 |||||||||||||||||||| Sbjct: 163329 ggcggcggcttcctcgtcga 163348
>gb|AC009606.4|ATAC009606 Arabidopsis thaliana chromosome III BAC F22F7 genomic sequence, complete sequence Length = 91924 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 364 ggccggcgtcgtcgccgtctccgt 387 |||||||| ||||||||||||||| Sbjct: 38585 ggccggcgccgtcgccgtctccgt 38608
>gb|AC145966.2| Pan troglodytes BAC clone RP43-17M9 from 7, complete sequence Length = 197140 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 ctcttcctccccaccagccc 249 |||||||||||||||||||| Sbjct: 156786 ctcttcctccccaccagccc 156805
>gb|AC154291.2| Mus musculus BAC clone RP23-447B21 from chromosome 17, complete sequence Length = 178703 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 ccccaccagcccagatcact 257 |||||||||||||||||||| Sbjct: 50065 ccccaccagcccagatcact 50046
>emb|Z83838.2|HS127B20 Human DNA sequence from clone RP1-127B20 on chromosome 22, complete sequence Length = 135259 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 accaaccactcaacaaacta 26 |||||||||||||||||||| Sbjct: 18803 accaaccactcaacaaacta 18784
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 cggcgccgacgaggtagtgttcga 87 |||||||||||||| ||||||||| Sbjct: 3818729 cggcgccgacgaggaagtgttcga 3818752
>gb|AF365399.1| Drosophila sechellia cramped (crm) gene, complete cds Length = 4062 Score = 40.1 bits (20), Expect = 5.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 355 cgctgccgcggccggcgtcgtcgccgtc 382 ||||||||| |||| ||||||||||||| Sbjct: 145 cgctgccgccgccgccgtcgtcgccgtc 172
>emb|AL939116.1|SCO939116 Streptomyces coelicolor A3(2) complete genome; segment 13/29 Length = 293050 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 359 gccgcggccggcgtcgtcgccgtc 382 |||||| ||||||||||||||||| Sbjct: 35560 gccgcgaccggcgtcgtcgccgtc 35537
>emb|AL591126.18| Mouse DNA sequence from clone RP23-188A3 on chromosome 11 Contains a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, the 5' end of the Nf1 gene for neurofibromatosis 1 and a ribosomal protein L17 (Rpl17) pseudogene, complete sequence Length = 190048 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 cgcgtccctcgctgccgcgg 365 |||||||||||||||||||| Sbjct: 46554 cgcgtccctcgctgccgcgg 46535
>gb|AE012298.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 206 of 460 of the complete genome Length = 12693 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 290 catggcggcggcttcctcgtcgag 313 |||| ||||||||||||||||||| Sbjct: 6637 catgtcggcggcttcctcgtcgag 6660
>gb|CP000136.1| Rhizobium etli CFN 42 plasmid p42c, complete sequence Length = 250948 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 288 tccatggcggcggcttcctcgtcg 311 ||||||||||||||||| |||||| Sbjct: 148067 tccatggcggcggcttcgtcgtcg 148044
>gb|AC023755.14| Homo sapiens chromosome 12, clone RP11-44P17, complete sequence Length = 135689 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 ctcttcctccccaccagccc 249 |||||||||||||||||||| Sbjct: 41343 ctcttcctccccaccagccc 41324
>gb|AC011257.9| Homo sapiens chromosome , clone RP11-26E5, complete sequence Length = 184194 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 ctcttcctccccaccagccc 249 |||||||||||||||||||| Sbjct: 95771 ctcttcctccccaccagccc 95752
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 290 catggcggcggcttcctcgtcgag 313 |||| ||||||||||||||||||| Sbjct: 2702985 catgtcggcggcttcctcgtcgag 2702962
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cgctgccgcggccggcgtcg 374 |||||||||||||||||||| Sbjct: 5382623 cgctgccgcggccggcgtcg 5382642
>emb|AL844591.6| Mouse DNA sequence from clone RP23-414J11 on chromosome 2, complete sequence Length = 215003 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 233 ttcctccccaccagcccaga 252 |||||||||||||||||||| Sbjct: 79373 ttcctccccaccagcccaga 79392
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cgcccaccggcctcgacccg 169 |||||||||||||||||||| Sbjct: 271025 cgcccaccggcctcgacccg 271044
>dbj|AP003810.6| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1119_A04 Length = 128906 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cgtcgtcgccgtctccgtcg 389 |||||||||||||||||||| Sbjct: 124907 cgtcgtcgccgtctccgtcg 124888
>dbj|AP005451.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0443H10 Length = 144695 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 374 gtcgccgtctccgtcgagtaccgcctcgcgcc 405 ||||||||| |||||| || |||||||||||| Sbjct: 57711 gtcgccgtcgccgtcgcgtcccgcctcgcgcc 57742
>dbj|AP005101.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0026I22 Length = 143302 Score = 40.1 bits (20), Expect = 5.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 374 gtcgccgtctccgtcgagtaccgcctcgcgcc 405 ||||||||| |||||| || |||||||||||| Sbjct: 125942 gtcgccgtcgccgtcgcgtcccgcctcgcgcc 125973
>dbj|AP003736.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1008_E09 Length = 101964 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 gcgtacgcctcttcctcccc 241 |||||||||||||||||||| Sbjct: 68089 gcgtacgcctcttcctcccc 68070
>dbj|AP005786.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0458H05 Length = 136299 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 gcgtacgcctcttcctcccc 241 |||||||||||||||||||| Sbjct: 134206 gcgtacgcctcttcctcccc 134187
>dbj|AP005826.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0758B01 Length = 159206 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cgtcgtcgccgtctccgtcg 389 |||||||||||||||||||| Sbjct: 21108 cgtcgtcgccgtctccgtcg 21127
>dbj|AP005797.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1131G07 Length = 133992 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cgtcgtcgccgtctccgtcg 389 |||||||||||||||||||| Sbjct: 124435 cgtcgtcgccgtctccgtcg 124454
>dbj|AK122138.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033136E09, full insert sequence Length = 1889 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cgtcgtcgccgtctccgtcg 389 |||||||||||||||||||| Sbjct: 736 cgtcgtcgccgtctccgtcg 717
>dbj|AK122077.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119E05, full insert sequence Length = 1528 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cgtcgtcgccgtctccgtcg 389 |||||||||||||||||||| Sbjct: 355 cgtcgtcgccgtctccgtcg 336
>dbj|AK109004.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-H02, full insert sequence Length = 1684 Score = 40.1 bits (20), Expect = 5.8 Identities = 35/40 (87%) Strand = Plus / Plus Query: 265 gaagctcccgataatcgtcttcttccatggcggcggcttc 304 |||||||||| | |||||| |||||| |||||||||||| Sbjct: 338 gaagctcccggtcgtcgtctacttccacggcggcggcttc 377
>dbj|AK069889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023040N08, full insert sequence Length = 2975 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 cgtcgtcgccgtctccgtcg 389 |||||||||||||||||||| Sbjct: 56 cgtcgtcgccgtctccgtcg 75
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 cgcggccggcgtcgtcgccg 380 |||||||||||||||||||| Sbjct: 2348996 cgcggccggcgtcgtcgccg 2349015
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 392 taccgcctcgcgcccgagcatccg 415 |||||||| ||||||||||||||| Sbjct: 466688 taccgcctggcgcccgagcatccg 466711
>dbj|AK064029.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-125-B04, full insert sequence Length = 1479 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cgtcgtcgccgtctccgtcg 389 |||||||||||||||||||| Sbjct: 326 cgtcgtcgccgtctccgtcg 307
>dbj|AP004262.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022B05 Length = 151317 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cgtcgtcgccgtctccgtcg 389 |||||||||||||||||||| Sbjct: 18148 cgtcgtcgccgtctccgtcg 18129
>gb|AY104728.1| Zea mays PCO113156 mRNA sequence Length = 1312 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 gcgtcgtcgccgtctccgtc 388 |||||||||||||||||||| Sbjct: 298 gcgtcgtcgccgtctccgtc 317
>dbj|AB088224.1| Streptomyces rochei plasmid pSLA2-L DNA, complete sequence Length = 210614 Score = 40.1 bits (20), Expect = 5.8 Identities = 32/36 (88%) Strand = Plus / Plus Query: 373 cgtcgccgtctccgtcgagtaccgcctcgcgcccga 408 ||||| ||| |||||||| ||||||||||| ||||| Sbjct: 182628 cgtcgtcgtatccgtcgactaccgcctcgcccccga 182663
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 350 tccctcgctgccgcggccgg 369 |||||||||||||||||||| Sbjct: 3967663 tccctcgctgccgcggccgg 3967682
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cgctgccgcggccggcgtcg 374 |||||||||||||||||||| Sbjct: 5449100 cgctgccgcggccggcgtcg 5449119
>emb|CT005232.1| upland soil cluster alpha (USCalpha), overlapping fosmid clones from an as-yet-uncultured methane oxidizer, complete sequence Length = 42329 Score = 40.1 bits (20), Expect = 5.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 64 cggcgccgacgaggtagtgttcga 87 |||||||||||||| ||||||||| Sbjct: 14472 cggcgccgacgaggaagtgttcga 14495
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 5.8 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 48 ctccggtgatggattccggcgccgacga 75 |||||||||||||| ||||||||||||| Sbjct: 881971 ctccggtgatggat-ccggcgccgacga 881997
>gb|L10367.1|MUSNF1X01 Mouse neurofibromin (NF1) gene, exon 1 Length = 1011 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 cgcgtccctcgctgccgcgg 365 |||||||||||||||||||| Sbjct: 421 cgcgtccctcgctgccgcgg 402
>gb|L24513.1|RHBHYPAB Bradyrhizobium japonicum hydrogenase-related protein (hypA and hypB) genes, complete cds Length = 1359 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 cgcggccggcgtcgtcgccg 380 |||||||||||||||||||| Sbjct: 1246 cgcggccggcgtcgtcgccg 1227
>dbj|AB042267.1| Zea mays ZmRR5 mRNA for response regulator 5, complete cds Length = 1654 Score = 40.1 bits (20), Expect = 5.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 369 gcgtcgtcgccgtctccgtc 388 |||||||||||||||||||| Sbjct: 567 gcgtcgtcgccgtctccgtc 586 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,589,114 Number of Sequences: 3902068 Number of extensions: 2589114 Number of successful extensions: 56053 Number of sequences better than 10.0: 159 Number of HSP's better than 10.0 without gapping: 166 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 52671 Number of HSP's gapped (non-prelim): 3417 length of query: 430 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 408 effective length of database: 17,147,199,772 effective search space: 6996057506976 effective search space used: 6996057506976 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
