ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast74f05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC092076.7| Oryza sativa chromosome 3 BAC OSJNBb0021G19 genomic sequence, complete sequence Length = 141582 Score = 260 bits (131), Expect = 4e-66 Identities = 236/271 (87%) Strand = Plus / Plus Query: 163 gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 222 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 98169 gcgtacgtggcgctgcaggcgctgaagcgcgccatcaccgacgaccccaagaacctgacg 98228 Query: 223 ggcaactggtgcggccccgatgtgtgcgcctactacggggtcttctgcgcaccgtccctc 282 || ||||||||| || || ||||||| ||||| ||| || | |||||| || | | | Sbjct: 98229 cacagctggtgcgggccggaggtgtgcggctacttcggcgtgtactgcgcggcggcgccc 98288 Query: 283 gacgacccgtgcgctcgcgcggtggccggcgtcgacctcaaccacggcgacctggccggc 342 |||||||||||||| ||| ||||||||||||| |||||||||||||||||||| |||||| Sbjct: 98289 gacgacccgtgcgcgcgcacggtggccggcgtggacctcaaccacggcgacctcgccggc 98348 Query: 343 acgctgccgttcgagctcggccacctcaccgacctcgccgtcctacacctcaactccaac 402 || || ||| |||||||||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 98349 accctcccggaggagctcggcctcctcaccgacctcgccgtcttccacctcaactccaac 98408 Query: 403 cgcttcgccgggggcctcccggactccctcc 433 |||||| ||| |||||| |||||||||| Sbjct: 98409 cgcttctgcggctccctccccgactccctcc 98439
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 260 bits (131), Expect = 4e-66 Identities = 236/271 (87%) Strand = Plus / Minus Query: 163 gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 222 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 32781372 gcgtacgtggcgctgcaggcgctgaagcgcgccatcaccgacgaccccaagaacctgacg 32781313 Query: 223 ggcaactggtgcggccccgatgtgtgcgcctactacggggtcttctgcgcaccgtccctc 282 || ||||||||| || || ||||||| ||||| ||| || | |||||| || | | | Sbjct: 32781312 cacagctggtgcgggccggaggtgtgcggctacttcggcgtgtactgcgcggcggcgccc 32781253 Query: 283 gacgacccgtgcgctcgcgcggtggccggcgtcgacctcaaccacggcgacctggccggc 342 |||||||||||||| ||| ||||||||||||| |||||||||||||||||||| |||||| Sbjct: 32781252 gacgacccgtgcgcgcgcacggtggccggcgtggacctcaaccacggcgacctcgccggc 32781193 Query: 343 acgctgccgttcgagctcggccacctcaccgacctcgccgtcctacacctcaactccaac 402 || || ||| |||||||||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 32781192 accctcccggaggagctcggcctcctcaccgacctcgccgtcttccacctcaactccaac 32781133 Query: 403 cgcttcgccgggggcctcccggactccctcc 433 |||||| ||| |||||| |||||||||| Sbjct: 32781132 cgcttctgcggctccctccccgactccctcc 32781102 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 163 gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 222 |||||||||||| | |||||| |||| |||||||||||| |||||||||||||||||| Sbjct: 24290049 gcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggaccccaagaacctgacg 24289990 Query: 223 g 223 | Sbjct: 24289989 g 24289989 Score = 60.0 bits (30), Expect = 7e-06 Identities = 84/102 (82%) Strand = Plus / Minus Query: 307 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgttcgagctcggccac 366 ||||||||||||||||||||||||||| | ||||| || || | | ||||||| | Sbjct: 24289905 gccggcgtcgacctcaaccacggcgacatcgccgggtgcctccccgaccacctcggcctc 24289846 Query: 367 ctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 ||| ||||| |||| |||| ||||||||||||||||||||| Sbjct: 24289845 ctcgccgacgtcgcgctcctccacctcaactccaaccgcttc 24289804 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 acctcaactccaaccgcttc 408 |||||||||||||||||||| Sbjct: 30985134 acctcaactccaaccgcttc 30985153
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 260 bits (131), Expect = 4e-66 Identities = 236/271 (87%) Strand = Plus / Minus Query: 163 gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 222 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 32871882 gcgtacgtggcgctgcaggcgctgaagcgcgccatcaccgacgaccccaagaacctgacg 32871823 Query: 223 ggcaactggtgcggccccgatgtgtgcgcctactacggggtcttctgcgcaccgtccctc 282 || ||||||||| || || ||||||| ||||| ||| || | |||||| || | | | Sbjct: 32871822 cacagctggtgcgggccggaggtgtgcggctacttcggcgtgtactgcgcggcggcgccc 32871763 Query: 283 gacgacccgtgcgctcgcgcggtggccggcgtcgacctcaaccacggcgacctggccggc 342 |||||||||||||| ||| ||||||||||||| |||||||||||||||||||| |||||| Sbjct: 32871762 gacgacccgtgcgcgcgcacggtggccggcgtggacctcaaccacggcgacctcgccggc 32871703 Query: 343 acgctgccgttcgagctcggccacctcaccgacctcgccgtcctacacctcaactccaac 402 || || ||| |||||||||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 32871702 accctcccggaggagctcggcctcctcaccgacctcgccgtcttccacctcaactccaac 32871643 Query: 403 cgcttcgccgggggcctcccggactccctcc 433 |||||| ||| |||||| |||||||||| Sbjct: 32871642 cgcttctgcggctccctccccgactccctcc 32871612 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 163 gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 222 |||||||||||| | |||||| |||| |||||||||||| |||||||||||||||||| Sbjct: 24207518 gcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggaccccaagaacctgacg 24207459 Query: 223 g 223 | Sbjct: 24207458 g 24207458 Score = 60.0 bits (30), Expect = 7e-06 Identities = 84/102 (82%) Strand = Plus / Minus Query: 307 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgttcgagctcggccac 366 ||||||||||||||||||||||||||| | ||||| || || | | ||||||| | Sbjct: 24207374 gccggcgtcgacctcaaccacggcgacatcgccgggtgcctccccgaccacctcggcctc 24207315 Query: 367 ctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 ||| ||||| |||| |||| ||||||||||||||||||||| Sbjct: 24207314 ctcgccgacgtcgcgctcctccacctcaactccaaccgcttc 24207273 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 acctcaactccaaccgcttc 408 |||||||||||||||||||| Sbjct: 31075657 acctcaactccaaccgcttc 31075676
>dbj|AK064239.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-A10, full insert sequence Length = 1408 Score = 260 bits (131), Expect = 4e-66 Identities = 236/271 (87%) Strand = Plus / Plus Query: 163 gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 222 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 257 gcgtacgtggcgctgcaggcgctgaagcgcgccatcaccgacgaccccaagaacctgacg 316 Query: 223 ggcaactggtgcggccccgatgtgtgcgcctactacggggtcttctgcgcaccgtccctc 282 || ||||||||| || || ||||||| ||||| ||| || | |||||| || | | | Sbjct: 317 cacagctggtgcgggccggaggtgtgcggctacttcggcgtgtactgcgcggcggcgccc 376 Query: 283 gacgacccgtgcgctcgcgcggtggccggcgtcgacctcaaccacggcgacctggccggc 342 |||||||||||||| ||| ||||||||||||| |||||||||||||||||||| |||||| Sbjct: 377 gacgacccgtgcgcgcgcacggtggccggcgtggacctcaaccacggcgacctcgccggc 436 Query: 343 acgctgccgttcgagctcggccacctcaccgacctcgccgtcctacacctcaactccaac 402 || || ||| |||||||||| ||||||||||||||||||| | ||||||||||||||| Sbjct: 437 accctcccggaggagctcggcctcctcaccgacctcgccgtcttccacctcaactccaac 496 Query: 403 cgcttcgccgggggcctcccggactccctcc 433 |||||| ||| |||||| |||||||||| Sbjct: 497 cgcttctgcggctccctccccgactccctcc 527
>ref|XM_476821.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1301 Score = 192 bits (97), Expect = 7e-46 Identities = 266/321 (82%), Gaps = 1/321 (0%) Strand = Plus / Plus Query: 130 cagacggccgacaacagcccacggctgcagcccgcgtacgtggcgctgcaggcgctcaag 189 |||||||| || |||| ||| |||||||||| ||||||||||||||||||||||| | Sbjct: 158 cagacggcggagaacaacccgcggctgcagcgggcgtacgtggcgctgcaggcgctgcgg 217 Query: 190 cgcgccatcaccgacgaccccaagaacctgacgggcaactggtgcggccccgatgtgtgc 249 || | |||||||||||||||||||||| || ||| |||||||||||||| |||||| Sbjct: 218 cggcgcgtcaccgacgaccccaagaacctcaccggcgggtggtgcggccccgacgtgtgc 277 Query: 250 gcctactacggggtcttctgcgcaccgtccctcgacgacccgtgcgctcgcgcggtggcc 309 ||||| ||| |||| |||||| | | | |||||||||||||| | | || ||| Sbjct: 278 cgctacttcggcgtctactgcgccgccgcgccggacgacccgtgcgccgccaccgtcgcc 337 Query: 310 ggcgtcgacctcaaccacggcgacctggccggcacgctgccgttcgagctcggccacctc 369 ||| |||||||||||||||||||||| |||| ||| || || ||||||||||| |||| Sbjct: 338 ggcatcgacctcaaccacggcgacctcgccgccaccctccccgacgagctcggcctcctc 397 Query: 370 accgacctcgccgtcctacacctcaactccaaccgcttcgccgggggcctcccggactcc 429 |||||||||||||| || ||||||||||||||||||||| |||| | ||||| ||| || Sbjct: 398 accgacctcgccgtgctccacctcaactccaaccgcttctccggcgcgctccccgacacc 457 Query: 430 ctcccc-agctctccctcctc 449 |||||| |||||||||||||| Sbjct: 458 ctccccaagctctccctcctc 478
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 192 bits (97), Expect = 7e-46 Identities = 266/321 (82%), Gaps = 1/321 (0%) Strand = Plus / Minus Query: 130 cagacggccgacaacagcccacggctgcagcccgcgtacgtggcgctgcaggcgctcaag 189 |||||||| || |||| ||| |||||||||| ||||||||||||||||||||||| | Sbjct: 4062848 cagacggcggagaacaacccgcggctgcagcgggcgtacgtggcgctgcaggcgctgcgg 4062789 Query: 190 cgcgccatcaccgacgaccccaagaacctgacgggcaactggtgcggccccgatgtgtgc 249 || | |||||||||||||||||||||| || ||| |||||||||||||| |||||| Sbjct: 4062788 cggcgcgtcaccgacgaccccaagaacctcaccggcgggtggtgcggccccgacgtgtgc 4062729 Query: 250 gcctactacggggtcttctgcgcaccgtccctcgacgacccgtgcgctcgcgcggtggcc 309 ||||| ||| |||| |||||| | | | |||||||||||||| | | || ||| Sbjct: 4062728 cgctacttcggcgtctactgcgccgccgcgccggacgacccgtgcgccgccaccgtcgcc 4062669 Query: 310 ggcgtcgacctcaaccacggcgacctggccggcacgctgccgttcgagctcggccacctc 369 ||| |||||||||||||||||||||| |||| ||| || || ||||||||||| |||| Sbjct: 4062668 ggcatcgacctcaaccacggcgacctcgccgccaccctccccgacgagctcggcctcctc 4062609 Query: 370 accgacctcgccgtcctacacctcaactccaaccgcttcgccgggggcctcccggactcc 429 |||||||||||||| || ||||||||||||||||||||| |||| | ||||| ||| || Sbjct: 4062608 accgacctcgccgtgctccacctcaactccaaccgcttctccggcgcgctccccgacacc 4062549 Query: 430 ctcccc-agctctccctcctc 449 |||||| |||||||||||||| Sbjct: 4062548 ctccccaagctctccctcctc 4062528
>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534H07 Length = 144689 Score = 192 bits (97), Expect = 7e-46 Identities = 266/321 (82%), Gaps = 1/321 (0%) Strand = Plus / Minus Query: 130 cagacggccgacaacagcccacggctgcagcccgcgtacgtggcgctgcaggcgctcaag 189 |||||||| || |||| ||| |||||||||| ||||||||||||||||||||||| | Sbjct: 55706 cagacggcggagaacaacccgcggctgcagcgggcgtacgtggcgctgcaggcgctgcgg 55647 Query: 190 cgcgccatcaccgacgaccccaagaacctgacgggcaactggtgcggccccgatgtgtgc 249 || | |||||||||||||||||||||| || ||| |||||||||||||| |||||| Sbjct: 55646 cggcgcgtcaccgacgaccccaagaacctcaccggcgggtggtgcggccccgacgtgtgc 55587 Query: 250 gcctactacggggtcttctgcgcaccgtccctcgacgacccgtgcgctcgcgcggtggcc 309 ||||| ||| |||| |||||| | | | |||||||||||||| | | || ||| Sbjct: 55586 cgctacttcggcgtctactgcgccgccgcgccggacgacccgtgcgccgccaccgtcgcc 55527 Query: 310 ggcgtcgacctcaaccacggcgacctggccggcacgctgccgttcgagctcggccacctc 369 ||| |||||||||||||||||||||| |||| ||| || || ||||||||||| |||| Sbjct: 55526 ggcatcgacctcaaccacggcgacctcgccgccaccctccccgacgagctcggcctcctc 55467 Query: 370 accgacctcgccgtcctacacctcaactccaaccgcttcgccgggggcctcccggactcc 429 |||||||||||||| || ||||||||||||||||||||| |||| | ||||| ||| || Sbjct: 55466 accgacctcgccgtgctccacctcaactccaaccgcttctccggcgcgctccccgacacc 55407 Query: 430 ctcccc-agctctccctcctc 449 |||||| |||||||||||||| Sbjct: 55406 ctccccaagctctccctcctc 55386
>dbj|AK062887.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-D11, full insert sequence Length = 1302 Score = 192 bits (97), Expect = 7e-46 Identities = 266/321 (82%), Gaps = 1/321 (0%) Strand = Plus / Plus Query: 130 cagacggccgacaacagcccacggctgcagcccgcgtacgtggcgctgcaggcgctcaag 189 |||||||| || |||| ||| |||||||||| ||||||||||||||||||||||| | Sbjct: 158 cagacggcggagaacaacccgcggctgcagcgggcgtacgtggcgctgcaggcgctgcgg 217 Query: 190 cgcgccatcaccgacgaccccaagaacctgacgggcaactggtgcggccccgatgtgtgc 249 || | |||||||||||||||||||||| || ||| |||||||||||||| |||||| Sbjct: 218 cggcgcgtcaccgacgaccccaagaacctcaccggcgggtggtgcggccccgacgtgtgc 277 Query: 250 gcctactacggggtcttctgcgcaccgtccctcgacgacccgtgcgctcgcgcggtggcc 309 ||||| ||| |||| |||||| | | | |||||||||||||| | | || ||| Sbjct: 278 cgctacttcggcgtctactgcgccgccgcgccggacgacccgtgcgccgccaccgtcgcc 337 Query: 310 ggcgtcgacctcaaccacggcgacctggccggcacgctgccgttcgagctcggccacctc 369 ||| |||||||||||||||||||||| |||| ||| || || ||||||||||| |||| Sbjct: 338 ggcatcgacctcaaccacggcgacctcgccgccaccctccccgacgagctcggcctcctc 397 Query: 370 accgacctcgccgtcctacacctcaactccaaccgcttcgccgggggcctcccggactcc 429 |||||||||||||| || ||||||||||||||||||||| |||| | ||||| ||| || Sbjct: 398 accgacctcgccgtgctccacctcaactccaaccgcttctccggcgcgctccccgacacc 457 Query: 430 ctcccc-agctctccctcctc 449 |||||| |||||||||||||| Sbjct: 458 ctccccaagctctccctcctc 478
>ref|XM_550392.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2207 Score = 75.8 bits (38), Expect = 1e-10 Identities = 86/102 (84%) Strand = Plus / Plus Query: 307 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgttcgagctcggccac 366 ||||||||||||||||||||||||||| | ||||| ||||| ||||||||||| Sbjct: 397 gccggcgtcgacctcaaccacggcgacatcgccgggtacctgccccccgagctcggcctg 456 Query: 367 ctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 ||| |||||||||| | || ||||||||||||||||||||| Sbjct: 457 ctcgccgacctcgcgctgctccacctcaactccaaccgcttc 498
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 75.8 bits (38), Expect = 1e-10 Identities = 86/102 (84%) Strand = Plus / Minus Query: 307 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgttcgagctcggccac 366 ||||||||||||||||||||||||||| | ||||| ||||| ||||||||||| Sbjct: 4180017 gccggcgtcgacctcaaccacggcgacatcgccgggtacctgccccccgagctcggcctg 4179958 Query: 367 ctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 ||| |||||||||| | || ||||||||||||||||||||| Sbjct: 4179957 ctcgccgacctcgcgctgctccacctcaactccaaccgcttc 4179916 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 371 ccgacctcgccgtcctacacctcaactccaaccgcttc 408 ||||||||||||| || ||||||||||||||||||||| Sbjct: 14422062 ccgacctcgccgtgctccacctcaactccaaccgcttc 14422025 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 354 cgagctcggccacctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 ||||||||||| ||| ||||||||||||| || ||| |||||||||||||||| Sbjct: 23281815 cgagctcggcctgctcgccgacctcgccgtgctccacgccaactccaaccgcttc 23281869 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 234 cggccccgatgtgtgcgcctactacggggtcttctgcgcaccgtc 278 ||||||||| |||||||||||| |||| || ||||||| ||||| Sbjct: 14422199 cggccccgacgtgtgcgcctacaacggcgtgctctgcgcgccgtc 14422155 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 gtggcgctgcaggcgctcaa 188 |||||||||||||||||||| Sbjct: 38127133 gtggcgctgcaggcgctcaa 38127114 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 ccacctcaccgacctcgccg 382 |||||||||||||||||||| Sbjct: 38011498 ccacctcaccgacctcgccg 38011479
>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1174_D05 Length = 128525 Score = 75.8 bits (38), Expect = 1e-10 Identities = 86/102 (84%) Strand = Plus / Minus Query: 307 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgttcgagctcggccac 366 ||||||||||||||||||||||||||| | ||||| ||||| ||||||||||| Sbjct: 17984 gccggcgtcgacctcaaccacggcgacatcgccgggtacctgccccccgagctcggcctg 17925 Query: 367 ctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 ||| |||||||||| | || ||||||||||||||||||||| Sbjct: 17924 ctcgccgacctcgcgctgctccacctcaactccaaccgcttc 17883
>dbj|AP002524.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0406H10 Length = 156419 Score = 75.8 bits (38), Expect = 1e-10 Identities = 86/102 (84%) Strand = Plus / Minus Query: 307 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgttcgagctcggccac 366 ||||||||||||||||||||||||||| | ||||| ||||| ||||||||||| Sbjct: 126988 gccggcgtcgacctcaaccacggcgacatcgccgggtacctgccccccgagctcggcctg 126929 Query: 367 ctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 ||| |||||||||| | || ||||||||||||||||||||| Sbjct: 126928 ctcgccgacctcgcgctgctccacctcaactccaaccgcttc 126887
>dbj|AK103199.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122A11, full insert sequence Length = 2207 Score = 75.8 bits (38), Expect = 1e-10 Identities = 86/102 (84%) Strand = Plus / Plus Query: 307 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgttcgagctcggccac 366 ||||||||||||||||||||||||||| | ||||| ||||| ||||||||||| Sbjct: 397 gccggcgtcgacctcaaccacggcgacatcgccgggtacctgccccccgagctcggcctg 456 Query: 367 ctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 ||| |||||||||| | || ||||||||||||||||||||| Sbjct: 457 ctcgccgacctcgcgctgctccacctcaactccaaccgcttc 498
>ref|XM_468996.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1447 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 163 gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 222 |||||||||||| | |||||| |||| |||||||||||| |||||||||||||||||| Sbjct: 252 gcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggaccccaagaacctgacg 311 Query: 223 g 223 | Sbjct: 312 g 312 Score = 60.0 bits (30), Expect = 7e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 307 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgttcgagctcggccac 366 ||||||||||||||||||||||||||| | ||||| || || | | ||||||| | Sbjct: 396 gccggcgtcgacctcaaccacggcgacatcgccgggtgcctccccgaccacctcggcctc 455 Query: 367 ctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 ||| ||||| |||| |||| ||||||||||||||||||||| Sbjct: 456 ctcgccgacgtcgcgctcctccacctcaactccaaccgcttc 497
>gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence, complete sequence Length = 171664 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 163 gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 222 |||||||||||| | |||||| |||| |||||||||||| |||||||||||||||||| Sbjct: 90575 gcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggaccccaagaacctgacg 90634 Query: 223 g 223 | Sbjct: 90635 g 90635 Score = 60.0 bits (30), Expect = 7e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 307 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgttcgagctcggccac 366 ||||||||||||||||||||||||||| | ||||| || || | | ||||||| | Sbjct: 90719 gccggcgtcgacctcaaccacggcgacatcgccgggtgcctccccgaccacctcggcctc 90778 Query: 367 ctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 ||| ||||| |||| |||| ||||||||||||||||||||| Sbjct: 90779 ctcgccgacgtcgcgctcctccacctcaactccaaccgcttc 90820
>dbj|AK109350.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E06, full insert sequence Length = 1511 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 163 gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 222 |||||||||||| | |||||| |||| |||||||||||| |||||||||||||||||| Sbjct: 286 gcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggaccccaagaacctgacg 345 Query: 223 g 223 | Sbjct: 346 g 346 Score = 60.0 bits (30), Expect = 7e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 307 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgttcgagctcggccac 366 ||||||||||||||||||||||||||| | ||||| || || | | ||||||| | Sbjct: 430 gccggcgtcgacctcaaccacggcgacatcgccgggtgcctccccgaccacctcggcctc 489 Query: 367 ctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 ||| ||||| |||| |||| ||||||||||||||||||||| Sbjct: 490 ctcgccgacgtcgcgctcctccacctcaactccaaccgcttc 531
>dbj|AK105732.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-H06, full insert sequence Length = 1642 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 163 gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 222 |||||||||||| | |||||| |||| |||||||||||| |||||||||||||||||| Sbjct: 286 gcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggaccccaagaacctgacg 345 Query: 223 g 223 | Sbjct: 346 g 346 Score = 60.0 bits (30), Expect = 7e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 307 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgttcgagctcggccac 366 ||||||||||||||||||||||||||| | ||||| || || | | ||||||| | Sbjct: 430 gccggcgtcgacctcaaccacggcgacatcgccgggtgcctccccgaccacctcggcctc 489 Query: 367 ctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 ||| ||||| |||| |||| ||||||||||||||||||||| Sbjct: 490 ctcgccgacgtcgcgctcctccacctcaactccaaccgcttc 531
>dbj|AK068135.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013133O22, full insert sequence Length = 1451 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 163 gcgtacgtggcgctgcaggcgctcaagcgcgccatcaccgacgaccccaagaacctgacg 222 |||||||||||| | |||||| |||| |||||||||||| |||||||||||||||||| Sbjct: 282 gcgtacgtggcgttccaggcgtggaagcacgccatcaccgaggaccccaagaacctgacg 341 Query: 223 g 223 | Sbjct: 342 g 342 Score = 60.0 bits (30), Expect = 7e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 307 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgttcgagctcggccac 366 ||||||||||||||||||||||||||| | ||||| || || | | ||||||| | Sbjct: 426 gccggcgtcgacctcaaccacggcgacatcgccgggtgcctccccgaccacctcggcctc 485 Query: 367 ctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 ||| ||||| |||| |||| ||||||||||||||||||||| Sbjct: 486 ctcgccgacgtcgcgctcctccacctcaactccaaccgcttc 527
>ref|NM_193983.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1512 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 371 ccgacctcgccgtcctacacctcaactccaaccgcttc 408 ||||||||||||| || ||||||||||||||||||||| Sbjct: 413 ccgacctcgccgtgctccacctcaactccaaccgcttc 450 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 234 cggccccgatgtgtgcgcctactacggggtcttctgcgcaccgtc 278 ||||||||| |||||||||||| |||| || ||||||| ||||| Sbjct: 276 cggccccgacgtgtgcgcctacaacggcgtgctctgcgcgccgtc 320
>gb|AC120888.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0485F09, complete sequence Length = 161276 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 355 gagctcggccacctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 |||||||||| |||||||||||||||| || | ||| ||||| ||||||||||| Sbjct: 59719 gagctcggcctcctcaccgacctcgccttcttccacatcaacaccaaccgcttc 59666
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 355 gagctcggccacctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 |||||||||| |||||||||||||||| || | ||| ||||| ||||||||||| Sbjct: 25452828 gagctcggcctcctcaccgacctcgccttcttccacatcaacaccaaccgcttc 25452775
>dbj|AP003312.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0025H06 Length = 151547 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 371 ccgacctcgccgtcctacacctcaactccaaccgcttc 408 ||||||||||||| || ||||||||||||||||||||| Sbjct: 83459 ccgacctcgccgtgctccacctcaactccaaccgcttc 83422 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Minus Query: 234 cggccccgatgtgtgcgcctactacggggtcttctgcgcaccgtc 278 ||||||||| |||||||||||| |||| || ||||||| ||||| Sbjct: 83596 cggccccgacgtgtgcgcctacaacggcgtgctctgcgcgccgtc 83552
>dbj|AK064742.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-D10, full insert sequence Length = 1799 Score = 60.0 bits (30), Expect = 7e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 371 ccgacctcgccgtcctacacctcaactccaaccgcttc 408 ||||||||||||| || ||||||||||||||||||||| Sbjct: 506 ccgacctcgccgtgctccacctcaactccaaccgcttc 543 Score = 42.1 bits (21), Expect = 1.5 Identities = 39/45 (86%) Strand = Plus / Plus Query: 234 cggccccgatgtgtgcgcctactacggggtcttctgcgcaccgtc 278 ||||||||| |||||||||||| |||| || ||||||| ||||| Sbjct: 369 cggccccgacgtgtgcgcctacaacggcgtgctctgcgcgccgtc 413
>dbj|AK061561.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-D10, full insert sequence Length = 1122 Score = 60.0 bits (30), Expect = 7e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 307 gccggcgtcgacctcaaccacggcgacctggccggcacgctgccgttcgagctcggccac 366 ||||||||||||||||||||||||||| | ||||| || || | | ||||||| | Sbjct: 63 gccggcgtcgacctcaaccacggcgacatcgccgggtgcctccccgaccacctcggcctc 122 Query: 367 ctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 ||| ||||| |||| |||| ||||||||||||||||||||| Sbjct: 123 ctcgccgacgtcgcgctcctccacctcaactccaaccgcttc 164
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 60.0 bits (30), Expect = 7e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 355 gagctcggccacctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 |||||||||| |||||||||||||||| || | ||| ||||| ||||||||||| Sbjct: 25771498 gagctcggcctcctcaccgacctcgccttcttccacatcaacaccaaccgcttc 25771445
>ref|NM_192605.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1713 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 354 cgagctcggccacctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 ||||||||||| ||| ||||||||||||| || ||| |||||||||||||||| Sbjct: 408 cgagctcggcctgctcgccgacctcgccgtgctccacgccaactccaaccgcttc 462
>dbj|AP003333.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1103C09 Length = 163996 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 354 cgagctcggccacctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 ||||||||||| ||| ||||||||||||| || ||| |||||||||||||||| Sbjct: 7513 cgagctcggcctgctcgccgacctcgccgtgctccacgccaactccaaccgcttc 7567
>dbj|AP003253.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451D05 Length = 148381 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 354 cgagctcggccacctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 ||||||||||| ||| ||||||||||||| || ||| |||||||||||||||| Sbjct: 68557 cgagctcggcctgctcgccgacctcgccgtgctccacgccaactccaaccgcttc 68611
>dbj|AK105670.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-A04, full insert sequence Length = 1985 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 354 cgagctcggccacctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 ||||||||||| ||| ||||||||||||| || ||| |||||||||||||||| Sbjct: 467 cgagctcggcctgctcgccgacctcgccgtgctccacgccaactccaaccgcttc 521
>dbj|AK105266.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-D06, full insert sequence Length = 2042 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 354 cgagctcggccacctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 ||||||||||| ||| ||||||||||||| || ||| |||||||||||||||| Sbjct: 466 cgagctcggcctgctcgccgacctcgccgtgctccacgccaactccaaccgcttc 520
>gb|AY109350.1| Zea mays CL844_1 mRNA sequence Length = 4275 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 354 cgagctcggccacctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 ||||||||||| ||||||||||||||| || | ||| ||||| ||||||||||| Sbjct: 435 cgagctcggcctgctcaccgacctcgccttcttccacatcaacaccaaccgcttc 489
>gb|AY106034.1| Zea mays PCO099903 mRNA sequence Length = 687 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 371 ccgacctcgccgtcctacacctcaactccaaccgc 405 |||||||||||||| | |||||||||||||||||| Sbjct: 22 ccgacctcgccgtcttccacctcaactccaaccgc 56
>gb|AF159297.2| Zea mays pollen extensin-like protein (Pex2) gene, complete cds Length = 3601 Score = 54.0 bits (27), Expect = 4e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 354 cgagctcggccacctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 ||||||||||| ||||||||||||||| || | ||| ||||| ||||||||||| Sbjct: 844 cgagctcggcctgctcaccgacctcgccttcttccacatcaacaccaaccgcttc 898
>ref|XM_476068.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1245 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 367 ctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 |||||||||||||| | || ||||||||||||||||||||| Sbjct: 361 ctcaccgacctcgcgctgctccacctcaactccaaccgcttc 402 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Plus Query: 204 cgaccccaagaacctgacgggcaactggtgcggccccgatgtgtgcgcctactacggggt 263 ||||||||||||||| || | | ||||| |||||||| |||||||||||| ||| || Sbjct: 189 cgaccccaagaacctcaccgccgactgggtcggccccgccgtgtgcgcctacaccggcgt 248 Query: 264 cttctgcgc 272 ||||||||| Sbjct: 249 cttctgcgc 257
>ref|XM_464070.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2085 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 371 ccgacctcgccgtcctacacctcaactccaaccgcttc 408 ||||||||||| || | ||||||||||||||||||||| Sbjct: 395 ccgacctcgccctcatccacctcaactccaaccgcttc 432
>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09, complete sequence Length = 145070 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 367 ctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 |||||||||||||| | || ||||||||||||||||||||| Sbjct: 125155 ctcaccgacctcgcgctgctccacctcaactccaaccgcttc 125114 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Minus Query: 204 cgaccccaagaacctgacgggcaactggtgcggccccgatgtgtgcgcctactacggggt 263 ||||||||||||||| || | | ||||| |||||||| |||||||||||| ||| || Sbjct: 125327 cgaccccaagaacctcaccgccgactgggtcggccccgccgtgtgcgcctacaccggcgt 125268 Query: 264 cttctgcgc 272 ||||||||| Sbjct: 125267 cttctgcgc 125259
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 367 ctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 |||||||||||||| | || ||||||||||||||||||||| Sbjct: 4757150 ctcaccgacctcgcgctgctccacctcaactccaaccgcttc 4757109 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Minus Query: 204 cgaccccaagaacctgacgggcaactggtgcggccccgatgtgtgcgcctactacggggt 263 ||||||||||||||| || | | ||||| |||||||| |||||||||||| ||| || Sbjct: 4757322 cgaccccaagaacctcaccgccgactgggtcggccccgccgtgtgcgcctacaccggcgt 4757263 Query: 264 cttctgcgc 272 ||||||||| Sbjct: 4757262 cttctgcgc 4757254
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 371 ccgacctcgccgtcctacacctcaactccaaccgcttc 408 ||||||||||| || | ||||||||||||||||||||| Sbjct: 2022911 ccgacctcgccctcatccacctcaactccaaccgcttc 2022874
>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0026E05 Length = 159860 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 371 ccgacctcgccgtcctacacctcaactccaaccgcttc 408 ||||||||||| || | ||||||||||||||||||||| Sbjct: 73119 ccgacctcgccctcatccacctcaactccaaccgcttc 73082
>emb|Z34465.1|ZMEXTENS Z.mays (B73) gene for extensin-like protein Length = 4431 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 355 gagctcggccacctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 |||||||||| ||||||||||||||| || | ||| ||||| ||||||||||| Sbjct: 899 gagctcggcctgctcaccgacctcgccttcttccacatcaacaccaaccgcttc 952
>gb|AY109630.1| Zea mays CL844_2 mRNA sequence Length = 3567 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 355 gagctcggccacctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 |||||||||| ||||||||||||||| || | ||| ||||| ||||||||||| Sbjct: 436 gagctcggcctgctcaccgacctcgccttcttccacatcaacaccaaccgcttc 489
>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11, complete sequence Length = 187956 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 367 ctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 |||||||||||||| | || ||||||||||||||||||||| Sbjct: 29558 ctcaccgacctcgcgctgctccacctcaactccaaccgcttc 29517 Score = 50.1 bits (25), Expect = 0.006 Identities = 58/69 (84%) Strand = Plus / Minus Query: 204 cgaccccaagaacctgacgggcaactggtgcggccccgatgtgtgcgcctactacggggt 263 ||||||||||||||| || | | ||||| |||||||| |||||||||||| ||| || Sbjct: 29730 cgaccccaagaacctcaccgccgactgggtcggccccgccgtgtgcgcctacaccggcgt 29671 Query: 264 cttctgcgc 272 ||||||||| Sbjct: 29670 cttctgcgc 29662
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 46.1 bits (23), Expect = 0.099 Identities = 38/43 (88%) Strand = Plus / Plus Query: 366 cctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 |||| |||||||||| | || ||||||||||||||||||||| Sbjct: 29238979 cctccccgacctcgcgctgctccacctcaactccaaccgcttc 29239021
>dbj|AP003761.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0018H04 Length = 142053 Score = 46.1 bits (23), Expect = 0.099 Identities = 38/43 (88%) Strand = Plus / Plus Query: 366 cctcaccgacctcgccgtcctacacctcaactccaaccgcttc 408 |||| |||||||||| | || ||||||||||||||||||||| Sbjct: 1777 cctccccgacctcgcgctgctccacctcaactccaaccgcttc 1819
>ref|XM_743953.1| Aspergillus fumigatus Af293 hypothetical protein (Afu7g04640) partial mRNA Length = 1605 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 gtggcgctgcaggcgctcaag 189 ||||||||||||||||||||| Sbjct: 999 gtggcgctgcaggcgctcaag 979
>emb|AL596225.11| Human DNA sequence from clone RP11-30D7 on chromosome 1 Contains part of the gene for a novel protein (FLJ31862, FLJ22091, FLJ10597) and two CpG islands, complete sequence Length = 148750 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 429 cctccccagctctccctcctc 449 ||||||||||||||||||||| Sbjct: 133664 cctccccagctctccctcctc 133684
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 334 ctggccggcacgctgccgttc 354 ||||||||||||||||||||| Sbjct: 1655056 ctggccggcacgctgccgttc 1655076
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 359 tcggccacctcaccgacctcgccgt 383 ||||||| ||||||||||||||||| Sbjct: 2288394 tcggccagctcaccgacctcgccgt 2288370
>ref|XM_320018.2| Anopheles gambiae str. PEST ENSANGP00000010492 (ENSANGG00000008003), partial mRNA Length = 1308 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 168 cgtggcgctgcaggcgctcaa 188 ||||||||||||||||||||| Sbjct: 277 cgtggcgctgcaggcgctcaa 257
>emb|AJ338219.1|HSA338219 Homo sapiens genomic sequence surrounding NotI site, clone NL1-CF21C Length = 525 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 429 cctccccagctctccctcctc 449 ||||||||||||||||||||| Sbjct: 485 cctccccagctctccctcctc 505
>gb|AE001825.1| Deinococcus radiodurans R1 chromosome 2, complete sequence Length = 412348 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 364 cacctcaccgacctcgccgtc 384 ||||||||||||||||||||| Sbjct: 197795 cacctcaccgacctcgccgtc 197815
>gb|AC167966.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940126D9, complete sequence Length = 125236 Score = 42.1 bits (21), Expect = 1.5 Identities = 30/33 (90%) Strand = Plus / Minus Query: 174 gctgcaggcgctcaagcgcgccatcaccgacga 206 |||||||| |||||| | ||||||||||||||| Sbjct: 3540 gctgcaggagctcaacctcgccatcaccgacga 3508
>gb|BC043362.1| Homo sapiens low density lipoprotein receptor class A domain containing 2, mRNA (cDNA clone IMAGE:4476294) Length = 1036 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 419 tcccggactccctccccagctctc 442 |||| ||||||||||||||||||| Sbjct: 14 tccctgactccctccccagctctc 37
>ref|NM_190140.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1596 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gtggcgctgcaggcgctcaa 188 |||||||||||||||||||| Sbjct: 1477 gtggcgctgcaggcgctcaa 1496
>ref|NM_190119.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2322 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 ccacctcaccgacctcgccg 382 |||||||||||||||||||| Sbjct: 48 ccacctcaccgacctcgccg 29
>ref|NM_001013693.1| Homo sapiens low density lipoprotein receptor class A domain containing 2 (LDLRAD2), mRNA Length = 4012 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 419 tcccggactccctccccagctctc 442 |||| ||||||||||||||||||| Sbjct: 884 tccctgactccctccccagctctc 907
>gb|AC005363.1| Homo sapiens chromosome 16, P1 clone 47-2H (LANL), complete sequence Length = 75108 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 ccctccccagctctccctcc 447 |||||||||||||||||||| Sbjct: 15245 ccctccccagctctccctcc 15226
>ref|XM_370239.1| Magnaporthe grisea 70-15 chromosome II hypothetical protein (MG06736.4) partial mRNA Length = 3798 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 309 cggcgtcgacctcaaccacg 328 |||||||||||||||||||| Sbjct: 444 cggcgtcgacctcaaccacg 463
>gb|AY288289.1| Hypocrea jecorina HEX1 (hex1) gene, complete cds Length = 4376 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 ccctccccagctctccctcc 447 |||||||||||||||||||| Sbjct: 1815 ccctccccagctctccctcc 1796
>gb|AC079887.17| Oryza sativa (japonica cultivar-group) chromosome 3 BAC OSJNBa0040E01 genomic sequence, complete sequence Length = 168759 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 acctcaactccaaccgcttc 408 |||||||||||||||||||| Sbjct: 110930 acctcaactccaaccgcttc 110911
>emb|AL590103.12| Human DNA sequence from clone RP11-132G19 on chromosome 1 Contains a novel gene, the 3' end of the HSPG2 gene for heparan sulfate proteoglycan 2 (perlecan), the 5' end of the USP31 gene for ubiquitin specific protease 31 and a CpG island, complete sequence Length = 175162 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 419 tcccggactccctccccagctctc 442 |||| ||||||||||||||||||| Sbjct: 98638 tccctgactccctccccagctctc 98661
>emb|AL031723.56|HS439A6 Human DNA sequence from clone LA16c-439A6 on chromosome 16 Contains the 3' part of the gene for a novel protein similar to heparan sulfate (glucosamine) 3-O-sulfotransferases, a cytochrome C-like polypeptide pseudogene, ESTs, STSs. GSSs and three CpG islands, complete sequence Length = 41255 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 ccctccccagctctccctcc 447 |||||||||||||||||||| Sbjct: 20964 ccctccccagctctccctcc 20945
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29 Length = 292200 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 ccacggcgacctggccggca 343 |||||||||||||||||||| Sbjct: 180402 ccacggcgacctggccggca 180383
>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29 Length = 314100 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 accacggcgacctggccggc 342 |||||||||||||||||||| Sbjct: 32580 accacggcgacctggccggc 32599
>gb|AE006640.1| Homo sapiens 16p13.3 sequence section 8 of 8 Length = 81579 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 428 ccctccccagctctccctcc 447 |||||||||||||||||||| Sbjct: 35321 ccctccccagctctccctcc 35302
>gb|AC008761.8| Homo sapiens chromosome 19 clone CTD-3149D2, complete sequence Length = 226170 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 384 cctacacctcaactccaacc 403 |||||||||||||||||||| Sbjct: 40263 cctacacctcaactccaacc 40282
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 ccggcacgctgccgttcgag 357 |||||||||||||||||||| Sbjct: 4110320 ccggcacgctgccgttcgag 4110301
>dbj|AK126732.1| Homo sapiens cDNA FLJ44778 fis, clone BRACE3035227 Length = 3263 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 ctccctccccagctctccct 445 |||||||||||||||||||| Sbjct: 541 ctccctccccagctctccct 522
>dbj|AK127275.1| Homo sapiens cDNA FLJ45342 fis, clone BRHIP3009753 Length = 4012 Score = 40.1 bits (20), Expect = 6.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 419 tcccggactccctccccagctctc 442 |||| ||||||||||||||||||| Sbjct: 884 tccctgactccctccccagctctc 907
>gb|AC009988.12| Homo sapiens chromosome 10 clone RP11-62L18, complete sequence Length = 174398 Score = 40.1 bits (20), Expect = 6.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 422 cggactccctccccagctctccctcctc 449 ||||| |||||||| ||||||||||||| Sbjct: 152660 cggacaccctcccccgctctccctcctc 152633
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 305 tggccggcgtcgacctcaaccacggcgacctg 336 ||||||| |||||||||||| |||||||||| Sbjct: 1509286 tggccggaatcgacctcaaccgcggcgacctg 1509255
>gb|AC102555.11| Mus musculus chromosome 8, clone RP23-163N19, complete sequence Length = 196060 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 ctccccagctctccctcctc 449 |||||||||||||||||||| Sbjct: 109944 ctccccagctctccctcctc 109925
>gb|AC007249.5| Homo sapiens BAC clone RP11-320M2 from 2, complete sequence Length = 200491 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 ctccctccccagctctccct 445 |||||||||||||||||||| Sbjct: 17310 ctccctccccagctctccct 17291
>gb|AC073257.6| Homo sapiens BAC clone RP11-213H22 from 2, complete sequence Length = 120488 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 ctccccagctctccctcctc 449 |||||||||||||||||||| Sbjct: 54824 ctccccagctctccctcctc 54843
>gb|AC010878.4| Homo sapiens BAC clone RP11-230E20 from 2, complete sequence Length = 154115 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 cctccccagctctccctcct 448 |||||||||||||||||||| Sbjct: 114402 cctccccagctctccctcct 114383
>dbj|AP003297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698A10 Length = 137348 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 ccacctcaccgacctcgccg 382 |||||||||||||||||||| Sbjct: 92442 ccacctcaccgacctcgccg 92423
>dbj|AP003261.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0471B04 Length = 138025 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 gtggcgctgcaggcgctcaa 188 |||||||||||||||||||| Sbjct: 95167 gtggcgctgcaggcgctcaa 95148
>dbj|AP003227.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0018C10 Length = 200183 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 169 gtggcgctgcaggcgctcaa 188 |||||||||||||||||||| Sbjct: 46367 gtggcgctgcaggcgctcaa 46348
>dbj|AK121636.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051N12, full insert sequence Length = 1756 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gtggcgctgcaggcgctcaa 188 |||||||||||||||||||| Sbjct: 1356 gtggcgctgcaggcgctcaa 1375
>dbj|AK119529.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-C05, full insert sequence Length = 1598 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gtggcgctgcaggcgctcaa 188 |||||||||||||||||||| Sbjct: 1295 gtggcgctgcaggcgctcaa 1314
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 acctcaccgacctcgccgtc 384 |||||||||||||||||||| Sbjct: 2879333 acctcaccgacctcgccgtc 2879352
>dbj|AK065286.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M14, full insert sequence Length = 1618 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gtggcgctgcaggcgctcaa 188 |||||||||||||||||||| Sbjct: 1356 gtggcgctgcaggcgctcaa 1375
>emb|BX537133.3| Zebrafish DNA sequence from clone DKEY-90M5 in linkage group 20, complete sequence Length = 249791 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 ctccccagctctccctcctc 449 |||||||||||||||||||| Sbjct: 223364 ctccccagctctccctcctc 223383
>gb|AY109232.1| Zea mays PCO115240 mRNA sequence Length = 1756 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 169 gtggcgctgcaggcgctcaa 188 |||||||||||||||||||| Sbjct: 1328 gtggcgctgcaggcgctcaa 1347
>emb|Y18523.4|ASY18523 Actinoplanes sp. SE50/110 complete acarbose (acb) gene cluster, strain SE50/110 Length = 41323 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 cggccacctcaccgacctcg 379 |||||||||||||||||||| Sbjct: 40051 cggccacctcaccgacctcg 40070
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 338 ccggcacgctgccgttcgag 357 |||||||||||||||||||| Sbjct: 4114918 ccggcacgctgccgttcgag 4114899
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 accacggcgacctggccggc 342 |||||||||||||||||||| Sbjct: 2644850 accacggcgacctggccggc 2644869
>gb|AF016913.1|AF016913 Mus musculus casein kinase II alpha 2 (Csnk2a2) gene, promoter region Length = 1498 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 ctccccagctctccctcctc 449 |||||||||||||||||||| Sbjct: 590 ctccccagctctccctcctc 609
>gb|AC154344.1| Mus musculus BAC clone RP23-226G16 from 16, complete sequence Length = 171340 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 ctccctccccagctctccct 445 |||||||||||||||||||| Sbjct: 66923 ctccctccccagctctccct 66942
>gb|AC165414.9| Mus musculus chromosome 8, clone RP23-424A21, complete sequence Length = 192707 Score = 40.1 bits (20), Expect = 6.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 430 ctccccagctctccctcctc 449 |||||||||||||||||||| Sbjct: 183993 ctccccagctctccctcctc 183974 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,966,970 Number of Sequences: 3902068 Number of extensions: 1966970 Number of successful extensions: 44268 Number of sequences better than 10.0: 90 Number of HSP's better than 10.0 without gapping: 95 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 42823 Number of HSP's gapped (non-prelim): 1441 length of query: 454 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 432 effective length of database: 17,147,199,772 effective search space: 7407590301504 effective search space used: 7407590301504 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
