| Clone Name | bast74f02 |
|---|---|
| Clone Library Name | barley_pub |
>SC5D_TOBAC (Q9ZT29) Delta-7-sterol-C5(6)-desaturase (EC 1.3.3.-) (Delta-7-C-5| sterol desaturase) (Delta7-sterol-C5-desaturase) Length = 271 Score = 168 bits (426), Expect = 6e-42 Identities = 78/126 (61%), Positives = 93/126 (73%) Frame = +2 Query: 95 EDYWGLFREETDWYNEIFLSAVVPGGGGWWRALPHPLRSWLRNCIGGYLLYFATGFLWCF 274 EDY F EET +YN + L +P WW LPH L+ WLRN IGG LLYF +GFLWCF Sbjct: 2 EDYLKQFVEETSFYNRLVLGTFMPES--WWGPLPHMLQGWLRNYIGGVLLYFISGFLWCF 59 Query: 275 VIYYWKRNAYIPKDAVPTVEAMKKQIIVASKAMPFYCALPSVSEHMIESGWTRCFFHISE 454 IY+ KRN YIPKDA+P+ +AM QI VA KAMP+YCALPS+SE+MIE+GWT+CF IS+ Sbjct: 60 YIYHLKRNVYIPKDAIPSNKAMLLQISVAMKAMPWYCALPSLSEYMIENGWTKCFARISD 119 Query: 455 VGWPMY 472 VGW Y Sbjct: 120 VGWLSY 125
>SC5D1_ARATH (Q39208) Delta-7-sterol-C5(6)-desaturase 1 (EC 1.3.3.-)| (Delta-7-C-5 sterol desaturase 1) (Delta7-sterol-C5-desaturase 1) (STEROL1 protein) (Dwarf 7 protein) Length = 281 Score = 154 bits (388), Expect = 1e-37 Identities = 70/121 (57%), Positives = 88/121 (72%) Frame = +2 Query: 113 FREETDWYNEIFLSAVVPGGGGWWRALPHPLRSWLRNCIGGYLLYFATGFLWCFVIYYWK 292 F +ET +YN I LS ++P W LPH L++WLRN + G LLYF +GFLWCF IYY K Sbjct: 11 FVDETSFYNRIVLSHLLPAN--LWEPLPHFLQTWLRNYLAGTLLYFISGFLWCFYIYYLK 68 Query: 293 RNAYIPKDAVPTVEAMKKQIIVASKAMPFYCALPSVSEHMIESGWTRCFFHISEVGWPMY 472 N Y+PKDA+PT++AM+ Q+ VA KAMP+Y LP+VSE MIE GWT+CF I E GW +Y Sbjct: 69 INVYLPKDAIPTIKAMRLQMFVAMKAMPWYTLLPTVSESMIERGWTKCFASIGEFGWILY 128 Query: 473 F 475 F Sbjct: 129 F 129
>SC5D2_ARATH (Q9M883) Putative delta-7-sterol-C5(6)-desaturase 2 (EC 1.3.3.-)| (Delta-7-C-5 sterol desaturase 2) (Delta7-sterol-C5-desaturase 2) (Homolog of DWF7 protein) Length = 279 Score = 135 bits (341), Expect = 4e-32 Identities = 63/126 (50%), Positives = 84/126 (66%) Frame = +2 Query: 98 DYWGLFREETDWYNEIFLSAVVPGGGGWWRALPHPLRSWLRNCIGGYLLYFATGFLWCFV 277 DY ET +YN + LS ++P W LPH L++WLRN + G +LYF +GFLWCF Sbjct: 7 DYNDQIVNETSFYNRMVLSHLLPVN--LWEPLPHFLQTWLRNYLAGNILYFISGFLWCFY 64 Query: 278 IYYWKRNAYIPKDAVPTVEAMKKQIIVASKAMPFYCALPSVSEHMIESGWTRCFFHISEV 457 IYY K N Y+PK+++PT +AM QI VA KAMP+Y LP+VSE+MIE GWT+C+ + Sbjct: 65 IYYLKLNVYVPKESIPTRKAMLLQIYVAMKAMPWYTLLPAVSEYMIEHGWTKCYSTLDHF 124 Query: 458 GWPMYF 475 W + F Sbjct: 125 NWFLCF 130
>SGLT_VIBPA (P96169) Sodium/glucose cotransporter (Na(+)/glucose symporter)| Length = 543 Score = 32.7 bits (73), Expect = 0.50 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 5/60 (8%) Frame = +2 Query: 257 GFLWCFVIYYWKRNAYIPKD--AVPTVEAMKKQIIVAS---KAMPFYCALPSVSEHMIES 421 G LW +YYW N YI + A +V +K I+ A+ +PF LP ++ ++I S Sbjct: 254 GGLWVANLYYWGFNQYIIQRTLAAKSVSEAQKGIVFAAFLKLIVPFLVVLPGIAAYVITS 313
>BSU1_SCHPO (P33532) Vitamin B6 transporter bsu1 (Vitamin B6 uptake protein 1)| (Changed amiloride resistance protein 1) (Amiloride transporter car1) Length = 526 Score = 30.8 bits (68), Expect = 1.9 Identities = 14/60 (23%), Positives = 28/60 (46%) Frame = +2 Query: 107 GLFREETDWYNEIFLSAVVPGGGGWWRALPHPLRSWLRNCIGGYLLYFATGFLWCFVIYY 286 G+ R E + + +F++ + P G + HP W+ +G ++ A G W ++ Y Sbjct: 379 GVARPEARFTSALFITLLFPAGMFLFAFTCHPPFPWMSPIVGNSMVTVANGHNWMCILNY 438
>WBP11_BRARE (Q6P0D5) WW domain-binding protein 11 (WBP-11)| Length = 640 Score = 29.6 bits (65), Expect = 4.2 Identities = 13/21 (61%), Positives = 14/21 (66%) Frame = -1 Query: 216 SQERSGCGSARHQPPPPGTTA 154 S E + GSA PPPPGTTA Sbjct: 512 SNEGAPSGSALQMPPPPGTTA 532
>NUOH_MYCTU (P65561) NADH-quinone oxidoreductase chain H (EC 1.6.99.5) (NADH| dehydrogenase I, chain H) (NDH-1, chain H) Length = 410 Score = 29.6 bits (65), Expect = 4.2 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = +2 Query: 176 GWWRALPHPLRSWLRNCIGGYLLYFATGFLWCFV-IYYWKRNAYIPK 313 G W A P PL W G + L + T +W F+ IY+W R A +P+ Sbjct: 265 GGWHA-PWPLNMWASANTGWWPLIWFTAKVWGFLFIYFWLR-ATLPR 309
>NUOH_MYCBO (P65562) NADH-quinone oxidoreductase chain H (EC 1.6.99.5) (NADH| dehydrogenase I, chain H) (NDH-1, chain H) Length = 410 Score = 29.6 bits (65), Expect = 4.2 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%) Frame = +2 Query: 176 GWWRALPHPLRSWLRNCIGGYLLYFATGFLWCFV-IYYWKRNAYIPK 313 G W A P PL W G + L + T +W F+ IY+W R A +P+ Sbjct: 265 GGWHA-PWPLNMWASANTGWWPLIWFTAKVWGFLFIYFWLR-ATLPR 309
>PRP28_CRYNE (Q5KNF8) Pre-mRNA splicing ATP-dependent RNA helicase PRP28 (EC| 3.6.1.-) Length = 738 Score = 29.3 bits (64), Expect = 5.5 Identities = 16/47 (34%), Positives = 22/47 (46%) Frame = +2 Query: 104 WGLFREETDWYNEIFLSAVVPGGGGWWRALPHPLRSWLRNCIGGYLL 244 W +FRE+ S GGG +PHPLR+W + I +L Sbjct: 294 WRIFRED--------FSIAARGGG-----IPHPLRNWRESAIPSQIL 327
>GLB3_TYLHE (P13578) Extracellular globin IIB (Erythrocruorin)| Length = 148 Score = 28.9 bits (63), Expect = 7.2 Identities = 11/23 (47%), Positives = 13/23 (56%) Frame = +2 Query: 389 LPSVSEHMIESGWTRCFFHISEV 457 LP VS H W RCF I++V Sbjct: 120 LPQVSSHFNSGAWDRCFTRIADV 142
>ATG13_EMENI (Q5BBK4) Autophagy-related protein 13| Length = 974 Score = 28.9 bits (63), Expect = 7.2 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = -1 Query: 207 RSGCGSARHQPPPPGTTALRKISLYQSVSSRNRPQ*SSP 91 R+ +RH PPP TT+ RK + ++ + P +SP Sbjct: 470 RTSLSDSRHMPPPSVTTSSRKPPSFGPDNANSSPNSASP 508
>RPGF3_RAT (Q9Z1C8) Rap guanine nucleotide exchange factor 3 (cAMP-regulated| guanine nucleotide exchange factor I) (cAMP-GEFI) (Exchange factor directly activated by cAMP 1) (Epac 1) Length = 884 Score = 28.5 bits (62), Expect = 9.4 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = +1 Query: 295 QRLHPQRCCPYSRSYEEANNCCIKG 369 +R+H RCC Y +E CI+G Sbjct: 4 KRMHRPRCCSYQLVFEHRRPSCIQG 28
>RPGF3_MOUSE (Q8VCC8) Rap guanine nucleotide exchange factor 3 (cAMP-regulated| guanine nucleotide exchange factor I) (cAMP-GEFI) (Exchange factor directly activated by cAMP 1) (Epac 1) Length = 876 Score = 28.5 bits (62), Expect = 9.4 Identities = 10/25 (40%), Positives = 14/25 (56%) Frame = +1 Query: 295 QRLHPQRCCPYSRSYEEANNCCIKG 369 +R+H RCC Y +E CI+G Sbjct: 4 KRMHRPRCCSYQLVFEHRRPSCIQG 28 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,117,491 Number of Sequences: 219361 Number of extensions: 843034 Number of successful extensions: 2659 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 2584 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2654 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)