ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast74e11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK110658.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 4e-13
2dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
3dbj|AP005818.3| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
4dbj|AP005562.3| Oryza sativa (japonica cultivar-group) genomic D... 82 2e-12
5ref|XM_481754.1| Oryza sativa (japonica cultivar-group), mRNA 60 6e-06
6ref|XM_507197.1| PREDICTED Oryza sativa (japonica cultivar-group... 60 6e-06
7dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
8dbj|AP005491.3| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
9dbj|AP004574.3| Oryza sativa (japonica cultivar-group) genomic D... 60 6e-06
10dbj|AK099022.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
11dbj|AK059052.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 6e-06
12emb|CR974589.6| Mouse DNA sequence from clone RP23-77B14 on chro... 46 0.085
13dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 46 0.085
14gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 46 0.085
15dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 44 0.33
16gb|AY764285.1| Canis familiaris von Hippel-Lindau disease tumor ... 42 1.3
17ref|NM_001008552.1| Canis familiaris von Hippel-Lindau tumor sup... 42 1.3
18ref|XM_472796.1| Oryza sativa (japonica cultivar-group), predic... 42 1.3
19gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 42 1.3
20emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete ... 42 1.3
21emb|AL606588.4|OSJN00023 Oryza sativa genomic DNA, chromosome 4,... 42 1.3
22gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 42 1.3
23gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.3
24dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
25gb|AF119361.1|AF119361 Frankia sp. EuIK1 NifK (nifK), NifE (nifE... 42 1.3
26ref|NM_197381.1| Oryza sativa (japonica cultivar-group) hypothet... 40 5.2
27gb|AY661566.1| Saccharopolyspora erythraea polyketide synthase g... 40 5.2
28ref|XM_611706.2| PREDICTED: Bos taurus similar to potassium volt... 40 5.2
29gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 5.2
30emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete ... 40 5.2
31emb|BX640435.1| Bordetella parapertussis strain 12822, complete ... 40 5.2
32emb|BX640420.1| Bordetella pertussis strain Tohama I, complete g... 40 5.2
33emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genom... 40 5.2
34emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete ... 40 5.2
35gb|AY217091.1| Oryctolagus cuniculus immunoglobulin mu heavy cha... 40 5.2
36gb|AC051634.6| Oryza sativa chromosome 10 BAC OSJNBb0018B10 geno... 40 5.2
37gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 5.2
38emb|BX933935.2| Gallus gallus finished cDNA, clone ChEST11m11 40 5.2
39emb|BX930733.2| Gallus gallus finished cDNA, clone ChEST377k2 40 5.2
40dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
41dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 5.2
42emb|X56107.1|SEERYA S. erythraea eryA gene for 6-deoxyerythronol... 40 5.2
43emb|X62569.1|SEERYABS S.erythraea eryA gene for 6-deoxyerythrono... 40 5.2
44gb|AY550897.1| Saccharum hybrid cultivar GrpE2 mRNA, complete cds 40 5.2
45emb|CR854929.8| Zebrafish DNA sequence from clone DKEY-14O4 in l... 40 5.2
46gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 5.2
47gb|M63677.1|SERERYAB S.erythraea second and third ORF's of eryA ... 40 5.2 
>dbj|AK110658.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-169-E11, full
           insert sequence
          Length = 1155

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 63/70 (90%)
 Strand = Plus / Plus

                                                                       
Query: 244 gggtaccatatatgttgaatcagcccttgagatactcaagcaacatctttcaaaggtttg 303
           |||| |||||||||||||||||||||||||||||||||| || ||| |||||| | ||||
Sbjct: 245 gggtcccatatatgttgaatcagcccttgagatactcaaccaccatttttcaacgttttg 304

                     
Query: 304 gcttttcatc 313
           | ||||||||
Sbjct: 305 gattttcatc 314



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/45 (91%)
 Strand = Plus / Plus

                                                        
Query: 118 cgcgcttcctcgcgcgggccacgaggcaatgcgccgccgcggtgg 162
           ||||| |||||||||||||  |||||||||||| |||||||||||
Sbjct: 104 cgcgcctcctcgcgcgggcgtcgaggcaatgcgtcgccgcggtgg 148
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                           
Query: 249     ccatatatgttgaatcagcccttgagatactcaagcaacatctttcaaaggtttggcttt 308
               |||||||||||||||||||||||||||||||||| || ||| |||||| | ||||| |||
Sbjct: 6194278 ccatatatgttgaatcagcccttgagatactcaaccaccatttttcaacgttttggattt 6194219

                    
Query: 309     tcatc 313
               |||||
Sbjct: 6194218 tcatc 6194214



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                            
Query: 118     cgcgcttcctcgcgcgggccacgaggcaatgcgccgccgcggtgg 162
               ||||| |||||||||||||  |||||||||||| |||||||||||
Sbjct: 6195449 cgcgcctcctcgcgcgggcgtcgaggcaatgcgtcgccgcggtgg 6195405
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>dbj|AP005818.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0009H03
          Length = 151685

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                         
Query: 249   ccatatatgttgaatcagcccttgagatactcaagcaacatctttcaaaggtttggcttt 308
             |||||||||||||||||||||||||||||||||| || ||| |||||| | ||||| |||
Sbjct: 82178 ccatatatgttgaatcagcccttgagatactcaaccaccatttttcaacgttttggattt 82119

                  
Query: 309   tcatc 313
             |||||
Sbjct: 82118 tcatc 82114



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                          
Query: 118   cgcgcttcctcgcgcgggccacgaggcaatgcgccgccgcggtgg 162
             ||||| |||||||||||||  |||||||||||| |||||||||||
Sbjct: 83349 cgcgcctcctcgcgcgggcgtcgaggcaatgcgtcgccgcggtgg 83305
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>dbj|AP005562.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1190_B07
          Length = 140200

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                         
Query: 249   ccatatatgttgaatcagcccttgagatactcaagcaacatctttcaaaggtttggcttt 308
             |||||||||||||||||||||||||||||||||| || ||| |||||| | ||||| |||
Sbjct: 39561 ccatatatgttgaatcagcccttgagatactcaaccaccatttttcaacgttttggattt 39502

                  
Query: 309   tcatc 313
             |||||
Sbjct: 39501 tcatc 39497



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                          
Query: 118   cgcgcttcctcgcgcgggccacgaggcaatgcgccgccgcggtgg 162
             ||||| |||||||||||||  |||||||||||| |||||||||||
Sbjct: 40732 cgcgcctcctcgcgcgggcgtcgaggcaatgcgtcgccgcggtgg 40688
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>ref|XM_481754.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1424

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 290 ctttcaaaggtttggcttttcatcttctactcctcaacaaaatgataagg 339
           ||||||||||||||| |||||||||||| |||| || ||| |||||||||
Sbjct: 295 ctttcaaaggtttgggttttcatcttctgctccccagcaagatgataagg 344
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>ref|XM_507197.1| PREDICTED Oryza sativa (japonica cultivar-group), P0702G08.16 mRNA
          Length = 1443

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 290 ctttcaaaggtttggcttttcatcttctactcctcaacaaaatgataagg 339
           ||||||||||||||| |||||||||||| |||| || ||| |||||||||
Sbjct: 303 ctttcaaaggtttgggttttcatcttctgctccccagcaagatgataagg 352
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                  
Query: 290      ctttcaaaggtttggcttttcatcttctactcctcaacaaaatgataagg 339
                ||||||||||||||| |||||||||||| |||| || ||| |||||||||
Sbjct: 15228079 ctttcaaaggtttgggttttcatcttctgctccccagcaagatgataagg 15228030
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>dbj|AP005491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0062G05
          Length = 152802

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                               
Query: 290   ctttcaaaggtttggcttttcatcttctactcctcaacaaaatgataagg 339
             ||||||||||||||| |||||||||||| |||| || ||| |||||||||
Sbjct: 13710 ctttcaaaggtttgggttttcatcttctgctccccagcaagatgataagg 13661
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>dbj|AP004574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0702G08
          Length = 144596

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                               
Query: 290   ctttcaaaggtttggcttttcatcttctactcctcaacaaaatgataagg 339
             ||||||||||||||| |||||||||||| |||| || ||| |||||||||
Sbjct: 75904 ctttcaaaggtttgggttttcatcttctgctccccagcaagatgataagg 75855
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>dbj|AK099022.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123N05, full
           insert sequence
          Length = 1424

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 290 ctttcaaaggtttggcttttcatcttctactcctcaacaaaatgataagg 339
           ||||||||||||||| |||||||||||| |||| || ||| |||||||||
Sbjct: 295 ctttcaaaggtttgggttttcatcttctgctccccagcaagatgataagg 344
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>dbj|AK059052.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-E11, full
           insert sequence
          Length = 1443

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                             
Query: 290 ctttcaaaggtttggcttttcatcttctactcctcaacaaaatgataagg 339
           ||||||||||||||| |||||||||||| |||| || ||| |||||||||
Sbjct: 303 ctttcaaaggtttgggttttcatcttctgctccccagcaagatgataagg 352
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>emb|CR974589.6| Mouse DNA sequence from clone RP23-77B14 on chromosome 12, complete
              sequence
          Length = 198849

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 284    caacatctttcaaaggtttggct 306
              |||||||||||||||||||||||
Sbjct: 137743 caacatctttcaaaggtttggct 137721
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 184     cgctcggcggcgtggcggtggccgccg 210
               |||||||||||||||||||||| ||||
Sbjct: 4207882 cgctcggcggcgtggcggtggcggccg 4207856
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 187     tcggcggcgtggcggtggccgcc 209
               |||||||||||||||||||||||
Sbjct: 1874273 tcggcggcgtggcggtggccgcc 1874251



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 148    gcgccgccgcggtggtggccgcctc 172
              ||||||||||| |||||||||||||
Sbjct: 525381 gcgccgccgcgctggtggccgcctc 525405



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 191     cggcgtggcggtggccgccg 210
               ||||||||||||||||||||
Sbjct: 1349291 cggcgtggcggtggccgccg 1349310
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 190     gcggcgtggcggtggccgccgc 211
               ||||||||||||||||||||||
Sbjct: 4811672 gcggcgtggcggtggccgccgc 4811651
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>gb|AY764285.1| Canis familiaris von Hippel-Lindau disease tumor suppressor (VHL)
          mRNA, complete cds
          Length = 941

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 32 gccctcctcctcggcgcccgcctcg 56
          |||| ||||||||||||||||||||
Sbjct: 98 gcccacctcctcggcgcccgcctcg 74
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>ref|NM_001008552.1| Canis familiaris von Hippel-Lindau tumor suppressor (VHL), mRNA
          Length = 941

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                   
Query: 32 gccctcctcctcggcgcccgcctcg 56
          |||| ||||||||||||||||||||
Sbjct: 98 gcccacctcctcggcgcccgcctcg 74
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>ref|XM_472796.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1755

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 34  cctcctcctcggcgcccgcctcgcg 58
           ||||||||||| |||||||||||||
Sbjct: 402 cctcctcctcgccgcccgcctcgcg 426
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 180     cggccgctcggcggcgtggcg 200
               |||||||||||||||||||||
Sbjct: 1790757 cggccgctcggcggcgtggcg 1790737



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 147  tgcgccgccgcggtggtggccgcc 170
            ||||||||||||| ||||||||||
Sbjct: 4742 tgcgccgccgcgggggtggccgcc 4765
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>emb|AL939119.1|SCO939119 Streptomyces coelicolor A3(2) complete genome; segment 16/29
          Length = 299050

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 149   cgccgccgcggtggtggccgc 169
             |||||||||||||||||||||
Sbjct: 23010 cgccgccgcggtggtggccgc 23030
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>emb|AL606588.4|OSJN00023 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0016O02,
            complete sequence
          Length = 167988

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 34   cctcctcctcggcgcccgcctcgcg 58
            ||||||||||| |||||||||||||
Sbjct: 3386 cctcctcctcgccgcccgcctcgcg 3362
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 150     gccgccgcggtggtggccgcc 170
               |||||||||||||||||||||
Sbjct: 1071973 gccgccgcggtggtggccgcc 1071953
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 148     gcgccgccgcggtggtggccg 168
               |||||||||||||||||||||
Sbjct: 2427598 gcgccgccgcggtggtggccg 2427578
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 34       cctcctcctcggcgcccgcctcgcg 58
                ||||||||||| |||||||||||||
Sbjct: 23285387 cctcctcctcgccgcccgcctcgcg 23285363
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>gb|AF119361.1|AF119361 Frankia sp. EuIK1 NifK (nifK), NifE (nifE), NifN (nifN), NifX (nifX),
            NifW (nifW), NifZ (nifZ), NifB (nifB), NifV (nifV), NifS
            (nifS), ferredoxin oxidoreductase a-subunit, ferredoxin
            oxidoreductase b-subunit, and ferredoxin I (fdxI) genes,
            complete cds; and unknown genes
          Length = 15056

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 185  gctcggcggcgtggcggtggccgcc 209
            |||||||| ||||||||||||||||
Sbjct: 8460 gctcggcgtcgtggcggtggccgcc 8436
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>ref|NM_197381.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBb0018B10.3), mRNA
          Length = 1599

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 39  tcctcggcgcccgcctcgcg 58
           ||||||||||||||||||||
Sbjct: 362 tcctcggcgcccgcctcgcg 381
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>gb|AY661566.1| Saccharopolyspora erythraea polyketide synthase gene cluster, complete
             sequence
          Length = 32299

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   cgccgccgcggtggtggccg 168
             ||||||||||||||||||||
Sbjct: 29116 cgccgccgcggtggtggccg 29135
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>ref|XM_611706.2| PREDICTED: Bos taurus similar to potassium voltage-gated channel,
           shaker-related subfamily, member 7 (LOC540492), mRNA
          Length = 1371

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 198 gcggtggccgccgctcgcccgttc 221
           ||||||||||||||| ||||||||
Sbjct: 535 gcggtggccgccgctggcccgttc 558
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 188    cggcggcgtggcggtggccgccgc 211
              |||||||||| |||||||||||||
Sbjct: 400346 cggcggcgtgacggtggccgccgc 400323
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>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16
          Length = 346287

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 189   ggcggcgtggcggtggccgc 208
             ||||||||||||||||||||
Sbjct: 93018 ggcggcgtggcggtggccgc 92999
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>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14
          Length = 346259

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 189   ggcggcgtggcggtggccgc 208
             ||||||||||||||||||||
Sbjct: 12273 ggcggcgtggcggtggccgc 12254
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>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12
          Length = 348134

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 189    ggcggcgtggcggtggccgc 208
              ||||||||||||||||||||
Sbjct: 260123 ggcggcgtggcggtggccgc 260104
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>emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genome; segment 8/16
          Length = 349640

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 151    ccgccgcggtggtggccgcc 170
              ||||||||||||||||||||
Sbjct: 161852 ccgccgcggtggtggccgcc 161833
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>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 150   gccgccgcggtggtggccgc 169
             ||||||||||||||||||||
Sbjct: 67316 gccgccgcggtggtggccgc 67335
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>gb|AY217091.1| Oryctolagus cuniculus immunoglobulin mu heavy chain gene, partial
            cds; and 3' Cmu region, complete sequence
          Length = 14934

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 32   gccctcctcctcggcgcccgcctc 55
            ||||||||||||||||||| ||||
Sbjct: 1051 gccctcctcctcggcgcccacctc 1028
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>gb|AC051634.6| Oryza sativa chromosome 10 BAC OSJNBb0018B10 genomic sequence, complete
             sequence
          Length = 135789

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    tcctcggcgcccgcctcgcg 58
             ||||||||||||||||||||
Sbjct: 21314 tcctcggcgcccgcctcgcg 21295
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 139     cgaggcaatgcgccgccgcg 158
               ||||||||||||||||||||
Sbjct: 4283130 cgaggcaatgcgccgccgcg 4283149
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>emb|BX933935.2| Gallus gallus finished cDNA, clone ChEST11m11
          Length = 1585

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 37  cctcctcggcgcccgcctcg 56
           ||||||||||||||||||||
Sbjct: 236 cctcctcggcgcccgcctcg 255
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>emb|BX930733.2| Gallus gallus finished cDNA, clone ChEST377k2
          Length = 586

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 37  cctcctcggcgcccgcctcg 56
           ||||||||||||||||||||
Sbjct: 236 cctcctcggcgcccgcctcg 255
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 39       tcctcggcgcccgcctcgcg 58
                ||||||||||||||||||||
Sbjct: 19564123 tcctcggcgcccgcctcgcg 19564104
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 41      ctcggcgcccgcctcgcgaa 60
               ||||||||||||||||||||
Sbjct: 6257627 ctcggcgcccgcctcgcgaa 6257646
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>emb|X56107.1|SEERYA S. erythraea eryA gene for 6-deoxyerythronolide B synthase
          Length = 9769

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 149  cgccgccgcggtggtggccg 168
            ||||||||||||||||||||
Sbjct: 6422 cgccgccgcggtggtggccg 6441
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>emb|X62569.1|SEERYABS S.erythraea eryA gene for 6-deoxyerythronolyde B synthase II & III
          Length = 20444

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   cgccgccgcggtggtggccg 168
             ||||||||||||||||||||
Sbjct: 17097 cgccgccgcggtggtggccg 17116
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>gb|AY550897.1| Saccharum hybrid cultivar GrpE2 mRNA, complete cds
          Length = 1215

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 115 ccgcgcgcttcctcgcgcgggccacgaggcaatgcgccgccgcggtgg 162
           |||||||| |||||||||| | | | ||||||||||||| ||| ||||
Sbjct: 102 ccgcgcgcctcctcgcgcgagtctccaggcaatgcgccggcgcagtgg 149
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>emb|CR854929.8| Zebrafish DNA sequence from clone DKEY-14O4 in linkage group 10,
             complete sequence
          Length = 74434

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 350   agccaaagaccaggaaagta 369
             ||||||||||||||||||||
Sbjct: 61948 agccaaagaccaggaaagta 61929
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 39       tcctcggcgcccgcctcgcg 58
                ||||||||||||||||||||
Sbjct: 19575399 tcctcggcgcccgcctcgcg 19575380
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>gb|M63677.1|SERERYAB S.erythraea second and third ORF's of eryA gene, complete cds
          Length = 20235

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 149   cgccgccgcggtggtggccg 168
             ||||||||||||||||||||
Sbjct: 17055 cgccgccgcggtggtggccg 17074


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,031,776
Number of Sequences: 3902068
Number of extensions: 3031776
Number of successful extensions: 64548
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62843
Number of HSP's gapped (non-prelim): 1705
length of query: 391
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 369
effective length of database: 17,147,199,772
effective search space: 6327316715868
effective search space used: 6327316715868
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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