>AKR2_ARATH (Q9SAR5) Ankyrin repeat domain-containing protein 2 (AtAKR2)|
          Length = 342

 Score =  129 bits (323), Expect = 5e-30
 Identities = 65/123 (52%), Positives = 89/123 (72%), Gaps = 8/123 (6%)
 Frame = +1

Query: 112 DQNEGSKSE---GLAAGAGLP----SPFDFSNMSSLLNDPSIREMAEQIASDPVFNQMAE 270
           ++N+ SK E   G +  + +P    + FDFSNM+S+LNDPSIREMAEQIA DP FNQ+AE
Sbjct: 20  EENKSSKPESASGSSTSSAMPGLNFNAFDFSNMASILNDPSIREMAEQIAKDPAFNQLAE 79

Query: 271 QLQKSAQGTGEQ-GVPSLDPQAYLETMTKVMQNPQFMSMAERLGNSLMQDPXMSSMLENL 447
           QLQ+S    G++ G P+ DPQ Y+ TM +VM NP+F +MAE+LG +L+QDP MS  L+  
Sbjct: 80  QLQRSIPNAGQEGGFPNFDPQQYVNTMQQVMHNPEFKTMAEKLGTALVQDPQMSPFLDAF 139

Query: 448 TSP 456
           ++P
Sbjct: 140 SNP 142

>KCY_MYCGA (Q7NBV1) Cytidylate kinase (EC 2.7.4.14) (CK) (Cytidine|
           monophosphate kinase) (CMP kinase)
          Length = 226

 Score = 33.1 bits (74), Expect = 0.36
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = +1

Query: 184 NMSSLLNDPSIREMAEQIASDPVFNQMAEQLQK 282
           N+S LLNDP+I + A +IA DP     A  LQ+
Sbjct: 83  NISQLLNDPTISKGASEIAQDPKIRAYALSLQQ 115

>SRP54_CANAL (O42816) Signal recognition particle 54 kDa protein homolog|
          Length = 556

 Score = 32.7 bits (73), Expect = 0.47
 Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
 Frame = +1

Query: 196 LLNDPSIREMAEQIASDPVFNQMAEQLQKSAQGTGEQGVPSL-----DPQAYLETMTKVM 360
           + N+P ++ M +Q  S+P F Q A  +   A G G  G   L     +P    +    + 
Sbjct: 466 MANNPQMQRMMQQAQSNPNFMQQAMNMLGGA-GGGAGGAGGLAGMMNNPAMMQQAQQMMR 524

Query: 361 QNPQFMSMAERLGNSLMQDPXM 426
            NPQ M  A++    +M++P M
Sbjct: 525 SNPQMMQQAQQ----MMKNPGM 542

>NHR41_CAEEL (Q9N4B8) Nuclear hormone receptor family member nhr-41|
          Length = 615

 Score = 32.0 bits (71), Expect = 0.81
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
 Frame = +1

Query: 163 PSPFDFSNMSSLLNDPSIREMAEQIASDPVFNQMAEQLQKSAQGTGEQGV-PSLDPQAYL 339
           P P DFS   SL+   +I++ +  I S P      +  Q +   T   G+ P+L   A +
Sbjct: 14  PPPIDFSR--SLIAPTAIKQESHLIPSTPGTPTAFQPPQHA--NTPIPGIQPNLFNPAIM 69

Query: 340 ETMTKVMQNPQFMSMAERLGNSLMQDPXM 426
                V  NPQ M+M +   N L+  P +
Sbjct: 70  AAQLNVFSNPQLMAMMQATRNPLLGHPSV 98

>SGT2_YEAST (Q12118) Small glutamine-rich tetratricopeptide repeat-containing|
           protein 2 (Viral protein U-binding protein) (SGT/UBP)
          Length = 346

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +1

Query: 133 SEGLAAGAGLPSPFDFSNMSSLLNDPSIREMA 228
           +EG A+G G P      N+S L+N+P++R MA
Sbjct: 299 AEGFASGGGTP------NLSDLMNNPALRNMA 324



 Score = 29.6 bits (65), Expect = 4.0
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +1

Query: 145 AAGAGLPSPFDFSNMSSLLNDPSIREMAEQIAS 243
           AA   + +P    N+  ++ DPSIR+MAE  AS
Sbjct: 272 AAQKMMSNPGAMQNIQKMMQDPSIRQMAEGFAS 304

>HRPZ_PSEAP (O87653) Harpin hrpZ (HrpZ-Psa protein) (Harpin-Psa)|
          Length = 342

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 17/34 (50%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 118 NEGSKSEGLAA-GAGLPSPFDFSNMSSLLNDPSI 216
           N+ S + GLA  G GL +P  FSN SS+  DP I
Sbjct: 199 NQQSDAGGLAGTGGGLGTPSSFSNNSSVTGDPLI 232

>AMPA_PHOLL (Q7MZ27) Probable cytosol aminopeptidase (EC 3.4.11.1) (Leucine|
           aminopeptidase) (LAP) (Leucyl aminopeptidase)
          Length = 506

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
 Frame = +1

Query: 121 EGSKSEGLAAGAGLPSPFDFSNM-SSLLNDPSIREMAEQIASDPVFNQMAEQLQKSAQGT 297
           E +   GLA  AG+ +  D SNM  ++ N   +   A Q+A        +     + +  
Sbjct: 171 ERAIQHGLAIAAGIKAAKDLSNMPPNICNAAYLASQARQLAD-------SANSHITTKVI 223

Query: 298 GEQGVPSLDPQAYLETMTKVMQNPQFMSMAERLGNS 405
           GE+ +  L   AYL  + +  QN   MS+ E  G+S
Sbjct: 224 GEEQMKELGMNAYL-AVGQGSQNESLMSVMEYKGSS 258

>PO6F2_HUMAN (P78424) POU domain, class 6, transcription factor 2|
           (Retina-derived POU-domain factor 1) (RPF-1)
          Length = 684

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 29/104 (27%), Positives = 36/104 (34%), Gaps = 6/104 (5%)
 Frame = +1

Query: 151 GAGLPSPFDFSNMSSLLNDPSIREMA------EQIASDPVFNQMAEQLQKSAQGTGEQGV 312
           G GLPSP    N   L+N+P   + A        IAS   F      LQ      G  G 
Sbjct: 274 GHGLPSPLTPPNPLQLVNNPLASQAAAAAAAMSSIASSQAFGNALSSLQ------GVTGQ 327

Query: 313 PSLDPQAYLETMTKVMQNPQFMSMAERLGNSLMQDPXMSSMLEN 444
              + Q  +     +M NP   S A      L   P    +L N
Sbjct: 328 LVTNAQGQIIGTIPLMPNPGPSSQAASGTQGLQVQPITPQLLTN 371

>PAM17_ASPFU (Q4WKN3) Presequence translocated-associated motor subunit pam17,|
           mitochondrial precursor
          Length = 247

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 13/54 (24%), Positives = 26/54 (48%)
 Frame = +1

Query: 181 SNMSSLLNDPSIREMAEQIASDPVFNQMAEQLQKSAQGTGEQGVPSLDPQAYLE 342
           ++ + +L  PS+R     +   P+F + A +L  +A       VP LD  ++ +
Sbjct: 51  TSTTRILLKPSLRPQTSSMCLSPIFRKTAFRLNSTAANASRAEVPKLDWNSFFK 104

>HRPZ_PSESY (P35674) Harpin hrpZ (HrpZ-Pss protein) (Harpin-Pss)|
          Length = 341

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 16/34 (47%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 118 NEGSKSEGLAA-GAGLPSPFDFSNMSSLLNDPSI 216
           N+ S +  LA  G GL +P  FSN SS++ DP I
Sbjct: 198 NQQSDAGSLAGTGGGLGTPSSFSNNSSVMGDPLI 231

>STIP1_MOUSE (Q60864) Stress-induced-phosphoprotein 1 (STI1)|
           (Hsc70/Hsp90-organizing protein) (Hop) (mSTI1)
          Length = 543

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +1

Query: 166 SPFDFSNM-SSLLNDPSIREMAEQIASDPVFNQMAEQLQKSAQGTG 300
           +PF+  N+   L NDP  R +     SDP + ++ EQLQ      G
Sbjct: 126 NPFNLPNLYQKLENDPRTRSLL----SDPTYRELIEQLQNKPSDLG 167

>STIP1_RAT (O35814) Stress-induced-phosphoprotein 1 (STI1)|
           (Hsc70/Hsp90-organizing protein) (Hop)
          Length = 543

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +1

Query: 166 SPFDFSNM-SSLLNDPSIREMAEQIASDPVFNQMAEQLQKSAQGTG 300
           +PF+  N+   L NDP  R +     SDP + ++ EQLQ      G
Sbjct: 126 NPFNLPNLYQKLENDPRTRTLL----SDPTYRELIEQLQNKPSDLG 167

>NAM7_YEAST (P30771) ATP-dependent helicase NAM7 (EC 3.6.1.-) (Nuclear|
           accomodation of mitochondria 7 protein)
           (Nonsense-mediated mRNA decay protein 1) (Up-frameshift
           suppressor 1)
          Length = 971

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = +1

Query: 151 GAGLPSPFDFSNMSSLLN-DPSIREMAEQIASDPVFNQMAEQLQKSAQG 294
           G+G  +P+D SN  S +N  P+ +  +  +  D V NQ+ E+ Q +  G
Sbjct: 3   GSGSHTPYDISNSPSDVNVQPATQLNSTLVEDDDVDNQLFEEAQVTETG 51

>RUMB_PASMU (Q9CPH1) 23S rRNA (uracil-5-)-methyltransferase rumB (EC 2.1.1.-)|
           (23S rRNA(M-5-U747)-methyltransferase)
          Length = 387

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 8/28 (28%)
 Frame = -2

Query: 337 GMLEDPNLEHP--------VPLYPAHFS 278
           GM+E P L HP         PLYPAHF+
Sbjct: 67  GMVERPILSHPQSEADLTDCPLYPAHFT 94

>YQKA_SCHPO (O74522) Protein C1494.10 in chromosome III|
          Length = 964

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 3/77 (3%)
 Frame = +1

Query: 163 PSPFDFSNMSSLLNDPSIREMAEQIASDPVFNQMAEQLQKSAQ---GTGEQGVPSLDPQA 333
           P+P +FS    +  DP+  +      SD     M  + Q   +      EQG  SL PQ+
Sbjct: 586 PNPNEFS----MSMDPANMQQGNHALSDYHMQLMLLEEQNKKRLMMARQEQGTGSLSPQS 641

Query: 334 YLETMTKVMQNPQFMSM 384
           Y+ +   V    + MSM
Sbjct: 642 YMNSRYSVDVGKEHMSM 658

>HASP_MOUSE (Q9Z0R0) Serine/threonine-protein kinase Haspin (EC 2.7.11.1)|
           (Haploid germ cell-specific nuclear protein kinase)
           (Germ cell-specific gene 2 protein)
          Length = 754

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +3

Query: 234 NCQRPCIQPD-G*AASEKCAGYRGTGCSKFGSSSIPGNHDKSYAESAV 374
           NC   C+  D       + +   GT  S F S + PG  D  YA+SAV
Sbjct: 122 NCSPGCLGSDHSVCIQSRDSNELGTSASLFSSPASPGAPDPLYADSAV 169


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.311    0.125    0.351 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,729,653
Number of Sequences: 219361
Number of extensions: 1297785
Number of successful extensions: 2763
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2759
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)