ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast74e10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY106235.1| Zea mays PCO066039 mRNA sequence 258 1e-65
2dbj|AK121370.1| Oryza sativa (japonica cultivar-group) cDNA clon... 226 5e-56
3dbj|AK098858.1| Oryza sativa (japonica cultivar-group) cDNA clon... 226 5e-56
4dbj|AK062078.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 1e-53
5gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome... 143 6e-31
6dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 143 6e-31
7dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic D... 143 6e-31
8gb|AY107157.1| Zea mays PCO066038 mRNA sequence 103 5e-19
9gb|AY107283.1| Zea mays PCO076711 mRNA sequence 98 3e-17
10ref|XM_483562.1| Oryza sativa (japonica cultivar-group), mRNA 68 3e-08
11dbj|AK108758.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 3e-08
12gb|DQ123971.1| Coffea arabica x Coffea canephora clone HT-SSH1-G... 50 0.006
13dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
14dbj|AP004592.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
15gb|AC067946.6| Homo sapiens BAC clone RP11-627C20 from 4, comple... 46 0.10
16gb|AC095050.3| Homo sapiens BAC clone RP11-287F9 from 4, complet... 46 0.10
17gb|AY258008.1| Nicotiana tabacum TGB12K interacting protein 3 (T... 46 0.10
18gb|AY258007.1| Nicotiana tabacum TGB12K interacting protein 2 (T... 46 0.10
19emb|AJ586515.1| Fagus sylvatica partial ank1 mRNA for ankyrin-re... 46 0.10
20gb|BT013193.1| Lycopersicon esculentum clone 134344R, mRNA sequence 44 0.40
21gb|AC156571.3| Mus musculus BAC clone RP23-264I19 from chromosom... 42 1.6
22gb|AY395742.1| Vitis aestivalis putative ankyrin-repeat protein ... 42 1.6
23emb|AL606487.15| Mouse DNA sequence from clone RP23-342L24 on ch... 42 1.6
24ref|XM_476131.1| Oryza sativa (japonica cultivar-group), predic... 40 6.3
25gb|AC138341.9| Mus musculus chromosome 5, clone RP23-37N15, comp... 40 6.3
26gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
27gb|AC135639.4| Mus musculus BAC clone RP23-330O16 from chromosom... 40 6.3
28gb|AC175612.4| Saimiri boliviensis boliviensis clone CH254-62B4,... 40 6.3
29emb|AL136988.17| Human DNA sequence from clone RP5-956O18 on chr... 40 6.3
30emb|CR936218.6| Human DNA sequence from clone RP11-669E14, compl... 40 6.3
31emb|CR932417.12| Human DNA sequence from clone XX-D_24I13, compl... 40 6.3
32emb|CR861361.1| Pongo pygmaeus mRNA; cDNA DKFZp459B042 (from clo... 40 6.3
33gb|AC147932.3| Saimiri boliviensis boliviensis clone CH254-331B1... 40 6.3
34gb|AC105347.4| Homo sapiens BAC clone RP11-719M16 from 4, comple... 40 6.3
35gb|AF358770.1| Oryza sativa clone Osl81 apospory-associated prot... 40 6.3
36gb|AC091628.2| Homo sapiens chromosome 17 map 17q21.1, complete ... 40 6.3
37emb|BX248108.11| Zebrafish DNA sequence from clone CH211-221P4, ... 40 6.3
38dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
39gb|AC010792.4|AC010792 Homo sapiens chromosome 17, clone -2524N8... 40 6.3
40emb|BX544879.6| Human DNA sequence from clone RP11-769P22 on chr... 40 6.3 
>gb|AY106235.1| Zea mays PCO066039 mRNA sequence
          Length = 1360

 Score =  258 bits (130), Expect = 1e-65
 Identities = 270/317 (85%)
 Strand = Plus / Plus

                                                                       
Query: 145 gcagctggtgcaggccttcccagtccttttgatttctccaacatgagcagcttgctcaat 204
           ||||||||||||||||| |||| ||| |||||||| ||    ||||||| ||||||||||
Sbjct: 175 gcagctggtgcaggcctccccaatccgtttgatttttcttctatgagcaacttgctcaat 234

                                                                       
Query: 205 gatccatctataagggagatggctgagcaaattgccagcgaccctgtattcaaccagatg 264
           || ||||| ||||| |||||||||||||||||||| || |||||||| ||||||||||||
Sbjct: 235 gacccatcgataagagagatggctgagcaaattgcaagtgaccctgtgttcaaccagatg 294

                                                                       
Query: 265 gctgagcagcttcagaaaagtgcgcagggtacaggggaacagggtgttccaagtttggat 324
           ||||| ||||||||||||||||| |||||| | || ||||||||| ||||    ||||||
Sbjct: 295 gctgaacagcttcagaaaagtgctcagggtgctggagaacagggtattcctgcattggat 354

                                                                       
Query: 325 cctcaagcatacctggaaaccatgacaaaagttatgcagaatccgcagttcatgtcaatg 384
           ||||||   ||  ||||||| |||  | |||| ||||| || || |||||  ||||||||
Sbjct: 355 cctcaacagtatatggaaacaatgcaacaagtcatgcaaaaccctcagtttgtgtcaatg 414

                                                                       
Query: 385 gcggagcgtcttgggaatagtcttatgcaggatcctgncatgtccagtatgcttgagaac 444
           || |||||||||||||||   ||||||||||||||||  |||||||||||||||||||||
Sbjct: 415 gcagagcgtcttgggaatgcccttatgcaggatcctgctatgtccagtatgcttgagaac 474

                            
Query: 445 ttgactagtccagctca 461
           ||||| |||||||||||
Sbjct: 475 ttgaccagtccagctca 491
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>dbj|AK121370.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125M12, full
           insert sequence
          Length = 1529

 Score =  226 bits (114), Expect = 5e-56
 Identities = 265/313 (84%), Gaps = 2/313 (0%)
 Strand = Plus / Plus

                                                                       
Query: 144 ggcagctggtgcaggccttcccagtccttttgatttctccaacatgagcagcttgctcaa 203
           |||| ||| |||||||||||||| |||||||||||| ||  |  | |||| |||||||||
Sbjct: 300 ggcacctgatgcaggccttcccaatccttttgatttttctcagtttagcaacttgctcaa 359

                                                                       
Query: 204 tgatccatctataagggagatggctgagcaaattgccagcgaccctgtattcaaccagat 263
           |||||||||||||| ||||||||| ||||| ||||| ||||||||||| |||| ||||||
Sbjct: 360 tgatccatctataaaggagatggcagagcagattgcaagcgaccctgtgttcacccagat 419

                                                                       
Query: 264 ggctgagcagcttcagaaaagtgcgcagggtacaggggaacagggtgttccaagtttgga 323
           ||| |||||||| ||||| ||||| || |  || |||||||||||||  ||    |||||
Sbjct: 420 ggcagagcagctgcagaagagtgctcatgtgaccggggaacagggtggccctgcattgga 479

                                                                       
Query: 324 tcctcaagca-tacctggaaaccatgacaaaagttatgcagaatccgcagttcatgtcaa 382
           ||||| |||| ||| ||||||| |||||| |||| ||||| || || || ||||||||||
Sbjct: 480 tcctc-agcagtacatggaaacaatgacacaagtcatgcaaaaccctcaattcatgtcaa 538

                                                                       
Query: 383 tggcggagcgtcttgggaatagtcttatgcaggatcctgncatgtccagtatgcttgaga 442
           |||| || ||||||||||||| |||||||||||||||||  |||||||||||||| ||||
Sbjct: 539 tggcagaacgtcttgggaatactcttatgcaggatcctggaatgtccagtatgctcgaga 598

                        
Query: 443 acttgactagtcc 455
             |||||||||||
Sbjct: 599 gtttgactagtcc 611
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>dbj|AK098858.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M21, full
           insert sequence
          Length = 1475

 Score =  226 bits (114), Expect = 5e-56
 Identities = 265/313 (84%), Gaps = 2/313 (0%)
 Strand = Plus / Plus

                                                                       
Query: 144 ggcagctggtgcaggccttcccagtccttttgatttctccaacatgagcagcttgctcaa 203
           |||| ||| |||||||||||||| |||||||||||| ||  |  | |||| |||||||||
Sbjct: 300 ggcacctgatgcaggccttcccaatccttttgatttttctcagtttagcaacttgctcaa 359

                                                                       
Query: 204 tgatccatctataagggagatggctgagcaaattgccagcgaccctgtattcaaccagat 263
           |||||||||||||| ||||||||| ||||| ||||| ||||||||||| |||| ||||||
Sbjct: 360 tgatccatctataaaggagatggcagagcagattgcaagcgaccctgtgttcacccagat 419

                                                                       
Query: 264 ggctgagcagcttcagaaaagtgcgcagggtacaggggaacagggtgttccaagtttgga 323
           ||| |||||||| ||||| ||||| || |  || |||||||||||||  ||    |||||
Sbjct: 420 ggcagagcagctgcagaagagtgctcatgtgaccggggaacagggtggccctgcattgga 479

                                                                       
Query: 324 tcctcaagca-tacctggaaaccatgacaaaagttatgcagaatccgcagttcatgtcaa 382
           ||||| |||| ||| ||||||| |||||| |||| ||||| || || || ||||||||||
Sbjct: 480 tcctc-agcagtacatggaaacaatgacacaagtcatgcaaaaccctcaattcatgtcaa 538

                                                                       
Query: 383 tggcggagcgtcttgggaatagtcttatgcaggatcctgncatgtccagtatgcttgaga 442
           |||| || ||||||||||||| |||||||||||||||||  |||||||||||||| ||||
Sbjct: 539 tggcagaacgtcttgggaatactcttatgcaggatcctggaatgtccagtatgctcgaga 598

                        
Query: 443 acttgactagtcc 455
             |||||||||||
Sbjct: 599 gtttgactagtcc 611
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>dbj|AK062078.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-044-F07, full
           insert sequence
          Length = 1418

 Score =  218 bits (110), Expect = 1e-53
 Identities = 264/313 (84%), Gaps = 2/313 (0%)
 Strand = Plus / Plus

                                                                       
Query: 144 ggcagctggtgcaggccttcccagtccttttgatttctccaacatgagcagcttgctcaa 203
           |||| ||| |||||||||||||| |||||||||||| ||  |  | |||| |||||||||
Sbjct: 305 ggcacctgatgcaggccttcccaatccttttgatttttctcagtttagcaacttgctcaa 364

                                                                       
Query: 204 tgatccatctataagggagatggctgagcaaattgccagcgaccctgtattcaaccagat 263
           |||||||||||||| ||||||||| ||||| ||||| ||||||||||| |||| ||||||
Sbjct: 365 tgatccatctataaaggagatggcagagcagattgcaagcgaccctgtgttcacccagat 424

                                                                       
Query: 264 ggctgagcagcttcagaaaagtgcgcagggtacaggggaacagggtgttccaagtttgga 323
           ||| |||||||| ||||| ||||| || |  || |||||||||||||  ||    |||||
Sbjct: 425 ggcagagcagctgcagaagagtgctcatgtgaccggggaacagggtggccctgcattgga 484

                                                                       
Query: 324 tcctcaagca-tacctggaaaccatgacaaaagttatgcagaatccgcagttcatgtcaa 382
           ||||| ||||  || ||||||| |||||| |||| ||||| || || || ||||||||||
Sbjct: 485 tcctc-agcagcacatggaaacaatgacacaagtcatgcaaaaccctcaattcatgtcaa 543

                                                                       
Query: 383 tggcggagcgtcttgggaatagtcttatgcaggatcctgncatgtccagtatgcttgaga 442
           |||| || ||||||||||||| |||||||||||||||||  |||||||||||||| ||||
Sbjct: 544 tggcagaacgtcttgggaatactcttatgcaggatcctggaatgtccagtatgctcgaga 603

                        
Query: 443 acttgactagtcc 455
             |||||||||||
Sbjct: 604 gtttgactagtcc 616
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>gb|AC137594.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBa0065A15, complete sequence
          Length = 168806

 Score =  143 bits (72), Expect = 6e-31
 Identities = 179/212 (84%), Gaps = 2/212 (0%)
 Strand = Plus / Plus

                                                                          
Query: 205    gatccatctataagggagatggctgagcaaattgccagcgaccctgtattcaaccagatg 264
              ||||||||||||| ||||||||| ||||| ||||| ||||||||||| |||| |||||||
Sbjct: 150143 gatccatctataaaggagatggcagagcagattgcaagcgaccctgtgttcacccagatg 150202

                                                                          
Query: 265    gctgagcagcttcagaaaagtgcgcagggtacaggggaacagggtgttccaagtttggat 324
              || |||||||| ||||| ||||| || |  || |||||||||||||  ||    ||||||
Sbjct: 150203 gcagagcagctgcagaagagtgctcatgtgaccggggaacagggtggccctgcattggat 150262

                                                                          
Query: 325    cctcaagca-tacctggaaaccatgacaaaagttatgcagaatccgcagttcatgtcaat 383
              |||| |||| ||| ||||||| |||||| |||| ||||| || || || |||||||||||
Sbjct: 150263 cctc-agcagtacatggaaacaatgacacaagtcatgcaaaaccctcaattcatgtcaat 150321

                                              
Query: 384    ggcggagcgtcttgggaatagtcttatgcagg 415
              ||| || ||||||||||||| |||||||||||
Sbjct: 150322 ggcagaacgtcttgggaatactcttatgcagg 150353



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                          
Query: 412    caggatcctgncatgtccagtatgcttgagaacttgactagtcc 455
              ||||||||||  |||||||||||||| ||||  |||||||||||
Sbjct: 150434 caggatcctggaatgtccagtatgctcgagagtttgactagtcc 150477



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                  
Query: 144    ggcagctggtgcaggccttcccagtccttttgattt 179
              |||| ||| |||||||||||||| ||||||||||||
Sbjct: 149969 ggcacctgatgcaggccttcccaatccttttgattt 150004
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  143 bits (72), Expect = 6e-31
 Identities = 179/212 (84%), Gaps = 2/212 (0%)
 Strand = Plus / Plus

                                                                            
Query: 205      gatccatctataagggagatggctgagcaaattgccagcgaccctgtattcaaccagatg 264
                ||||||||||||| ||||||||| ||||| ||||| ||||||||||| |||| |||||||
Sbjct: 19667068 gatccatctataaaggagatggcagagcagattgcaagcgaccctgtgttcacccagatg 19667127

                                                                            
Query: 265      gctgagcagcttcagaaaagtgcgcagggtacaggggaacagggtgttccaagtttggat 324
                || |||||||| ||||| ||||| || |  || |||||||||||||  ||    ||||||
Sbjct: 19667128 gcagagcagctgcagaagagtgctcatgtgaccggggaacagggtggccctgcattggat 19667187

                                                                            
Query: 325      cctcaagca-tacctggaaaccatgacaaaagttatgcagaatccgcagttcatgtcaat 383
                |||| |||| ||| ||||||| |||||| |||| ||||| || || || |||||||||||
Sbjct: 19667188 cctc-agcagtacatggaaacaatgacacaagtcatgcaaaaccctcaattcatgtcaat 19667246

                                                
Query: 384      ggcggagcgtcttgggaatagtcttatgcagg 415
                ||| || ||||||||||||| |||||||||||
Sbjct: 19667247 ggcagaacgtcttgggaatactcttatgcagg 19667278



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                            
Query: 412      caggatcctgncatgtccagtatgcttgagaacttgactagtcc 455
                ||||||||||  |||||||||||||| ||||  |||||||||||
Sbjct: 19667359 caggatcctggaatgtccagtatgctcgagagtttgactagtcc 19667402



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                    
Query: 144      ggcagctggtgcaggccttcccagtccttttgattt 179
                |||| ||| |||||||||||||| ||||||||||||
Sbjct: 19666894 ggcacctgatgcaggccttcccaatccttttgattt 19666929
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>dbj|AP006756.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0450E05
          Length = 176553

 Score =  143 bits (72), Expect = 6e-31
 Identities = 179/212 (84%), Gaps = 2/212 (0%)
 Strand = Plus / Plus

                                                                         
Query: 205   gatccatctataagggagatggctgagcaaattgccagcgaccctgtattcaaccagatg 264
             ||||||||||||| ||||||||| ||||| ||||| ||||||||||| |||| |||||||
Sbjct: 12754 gatccatctataaaggagatggcagagcagattgcaagcgaccctgtgttcacccagatg 12813

                                                                         
Query: 265   gctgagcagcttcagaaaagtgcgcagggtacaggggaacagggtgttccaagtttggat 324
             || |||||||| ||||| ||||| || |  || |||||||||||||  ||    ||||||
Sbjct: 12814 gcagagcagctgcagaagagtgctcatgtgaccggggaacagggtggccctgcattggat 12873

                                                                         
Query: 325   cctcaagca-tacctggaaaccatgacaaaagttatgcagaatccgcagttcatgtcaat 383
             |||| |||| ||| ||||||| |||||| |||| ||||| || || || |||||||||||
Sbjct: 12874 cctc-agcagtacatggaaacaatgacacaagtcatgcaaaaccctcaattcatgtcaat 12932

                                             
Query: 384   ggcggagcgtcttgggaatagtcttatgcagg 415
             ||| || ||||||||||||| |||||||||||
Sbjct: 12933 ggcagaacgtcttgggaatactcttatgcagg 12964



 Score = 50.1 bits (25), Expect = 0.006
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 412   caggatcctgncatgtccagtatgcttgagaacttgactagtcc 455
             ||||||||||  |||||||||||||| ||||  |||||||||||
Sbjct: 13045 caggatcctggaatgtccagtatgctcgagagtttgactagtcc 13088



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                                 
Query: 144   ggcagctggtgcaggccttcccagtccttttgattt 179
             |||| ||| |||||||||||||| ||||||||||||
Sbjct: 12580 ggcacctgatgcaggccttcccaatccttttgattt 12615
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>gb|AY107157.1| Zea mays PCO066038 mRNA sequence
          Length = 776

 Score =  103 bits (52), Expect = 5e-19
 Identities = 73/80 (91%)
 Strand = Plus / Plus

                                                                       
Query: 208 ccatctataagggagatggctgagcaaattgccagcgaccctgtattcaaccagatggct 267
           ||||| ||||| |||||||||||||||||||| || |||||||| ||||||||||||| |
Sbjct: 200 ccatcaataagagagatggctgagcaaattgcaagtgaccctgtgttcaaccagatggtt 259

                               
Query: 268 gagcagcttcagaaaagtgc 287
           || |||||||||||||||||
Sbjct: 260 gaacagcttcagaaaagtgc 279



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 415 gatcctgncatgtccagtatgcttgagaacttgac 449
           |||||||  |||||||| |||||||||||||||||
Sbjct: 306 gatcctgctatgtccagaatgcttgagaacttgac 340
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>gb|AY107283.1| Zea mays PCO076711 mRNA sequence
          Length = 1604

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 97/113 (85%)
 Strand = Plus / Plus

                                                                       
Query: 196 ttgctcaatgatccatctataagggagatggctgagcaaattgccagcgaccctgtattc 255
           |||||||||||||||||||| | ||||||||| || |||||||| || || |||| ||||
Sbjct: 418 ttgctcaatgatccatctattaaggagatggcagatcaaattgcaagggatcctgcattc 477

                                                                
Query: 256 aaccagatggctgagcagcttcagaaaagtgcgcagggtacaggggaacaggg 308
           |||| ||||||||||||||| |||| |||||| ||  | ||||| ||||||||
Sbjct: 478 aaccggatggctgagcagctacagagaagtgctcaaagcacaggagaacaggg 530



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 382 atggcggagcgtcttgggaatagtcttatgcaggatcctgncatgtccagtatgct 437
           ||||| |||||||| ||||||  |||||||||||||||||  ||||||||||||||
Sbjct: 604 atggcagagcgtctggggaatgctcttatgcaggatcctgctatgtccagtatgct 659
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>ref|XM_483562.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1306

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 380 caatggcggagcgtcttgggaatagtcttatgcaggatcctgncatgtccagtatgcttg 439
           ||||||| |||||||||||| ||  |||| || |||||||||  ||||||||| |||| |
Sbjct: 370 caatggcagagcgtcttggggatgctcttgtgaaggatcctgcaatgtccagtctgctgg 429

                            
Query: 440 agaacttgactagtcca 456
           | |||||||||||||||
Sbjct: 430 aaaacttgactagtcca 446



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                       
Query: 192 cagcttgctcaatgatccatctataagggagatggctgagcaaattgccagcgaccctgt 251
           |||||||||||||||||||||| ||| |||||| || || || ||||| |  ||||||| 
Sbjct: 197 cagcttgctcaatgatccatctgtaaaggagatagcagatcagattgcaaaggaccctgc 256

                                 
Query: 252 attcaaccagatggctgagcag 273
            |||| ||||||||| ||||||
Sbjct: 257 gttcacccagatggcggagcag 278
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>dbj|AK108758.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-G03, full
           insert sequence
          Length = 1292

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                       
Query: 380 caatggcggagcgtcttgggaatagtcttatgcaggatcctgncatgtccagtatgcttg 439
           ||||||| |||||||||||| ||  |||| || |||||||||  ||||||||| |||| |
Sbjct: 370 caatggcagagcgtcttggggatgctcttgtgaaggatcctgcaatgtccagtctgctgg 429

                            
Query: 440 agaacttgactagtcca 456
           | |||||||||||||||
Sbjct: 430 aaaacttgactagtcca 446



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 69/82 (84%)
 Strand = Plus / Plus

                                                                       
Query: 192 cagcttgctcaatgatccatctataagggagatggctgagcaaattgccagcgaccctgt 251
           |||||||||||||||||||||| ||| |||||| || || || ||||| |  ||||||| 
Sbjct: 197 cagcttgctcaatgatccatctgtaaaggagatagcagatcagattgcaaaggaccctgc 256

                                 
Query: 252 attcaaccagatggctgagcag 273
            |||| ||||||||| ||||||
Sbjct: 257 gttcacccagatggcggagcag 278
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>gb|DQ123971.1| Coffea arabica x Coffea canephora clone HT-SSH1-G01 mRNA sequence
          Length = 515

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 90/112 (80%)
 Strand = Plus / Plus

                                                                       
Query: 353 aagttatgcagaatccgcagttcatgtcaatggcggagcgtcttgggaatagtcttatgc 412
           |||||||||| ||||| || || ||| ||||||| ||||| ||||| |||  | | ||||
Sbjct: 46  aagttatgcaaaatccacaatttatgacaatggctgagcggcttggcaatgctttaatgc 105

                                                               
Query: 413 aggatcctgncatgtccagtatgcttgagaacttgactagtccagctcacaa 464
           |||||||    |||||| | ||||||||||| ||||| | ||||| ||||||
Sbjct: 106 aggatccatctatgtccggcatgcttgagaatttgaccaatccagttcacaa 157
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                            
Query: 413      aggatcctgncatgtccagtatgcttgagaacttgactagtcca 456
                |||||||||  ||||||||| |||| || |||||||||||||||
Sbjct: 26976910 aggatcctgcaatgtccagtctgctggaaaacttgactagtcca 26976953
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>dbj|AP004592.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0666G10
          Length = 150761

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                         
Query: 413   aggatcctgncatgtccagtatgcttgagaacttgactagtcca 456
             |||||||||  ||||||||| |||| || |||||||||||||||
Sbjct: 78310 aggatcctgcaatgtccagtctgctggaaaacttgactagtcca 78353
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>gb|AC067946.6| Homo sapiens BAC clone RP11-627C20 from 4, complete sequence
          Length = 136875

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 344   ccatgacaaaagttatgcagaat 366
             |||||||||||||||||||||||
Sbjct: 36420 ccatgacaaaagttatgcagaat 36442
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>gb|AC095050.3| Homo sapiens BAC clone RP11-287F9 from 4, complete sequence
          Length = 220878

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 344   ccatgacaaaagttatgcagaat 366
             |||||||||||||||||||||||
Sbjct: 34041 ccatgacaaaagttatgcagaat 34063
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>gb|AY258008.1| Nicotiana tabacum TGB12K interacting protein 3 (TIP3) mRNA,
           complete cds
          Length = 1047

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 259 cagatggctgagcagcttcagaa 281
           |||||||||||||||||||||||
Sbjct: 241 cagatggctgagcagcttcagaa 263
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>gb|AY258007.1| Nicotiana tabacum TGB12K interacting protein 2 (TIP2) mRNA,
           complete cds
          Length = 1050

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 259 cagatggctgagcagcttcagaa 281
           |||||||||||||||||||||||
Sbjct: 244 cagatggctgagcagcttcagaa 266
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>emb|AJ586515.1| Fagus sylvatica partial ank1 mRNA for ankyrin-repeat protein
          Length = 700

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 247 cctgtattcaaccagatggctgagcagcttcagaa 281
           |||| ||||||||||||||| |||||||| |||||
Sbjct: 424 cctgcattcaaccagatggcagagcagctccagaa 458
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>gb|BT013193.1| Lycopersicon esculentum clone 134344R, mRNA sequence
          Length = 1379

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 244 gaccctgtattcaaccagatggctgagcagcttcagaa 281
           ||||||| ||| || |||||||| ||||||||||||||
Sbjct: 325 gaccctgcatttaatcagatggcagagcagcttcagaa 362
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>gb|AC156571.3| Mus musculus BAC clone RP23-264I19 from chromosome 13, complete
             sequence
          Length = 196911

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 300   ggaacagggtgttccaagttt 320
             |||||||||||||||||||||
Sbjct: 66839 ggaacagggtgttccaagttt 66819
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>gb|AY395742.1| Vitis aestivalis putative ankyrin-repeat protein mRNA, complete cds
          Length = 1065

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 83/104 (79%)
 Strand = Plus / Plus

                                                                       
Query: 353 aagttatgcagaatccgcagttcatgtcaatggcggagcgtcttgggaatagtcttatgc 412
           |||||||||| ||||| || || ||| | ||||| ||||||||||| |||    | ||||
Sbjct: 329 aagttatgcaaaatcctcaatttatgactatggctgagcgtcttggtaatgcattaatgc 388

                                                       
Query: 413 aggatcctgncatgtccagtatgcttgagaacttgactagtcca 456
           |||||||    |||||||| ||||||||||| ||| ||| ||||
Sbjct: 389 aggatccatctatgtccagcatgcttgagaatttggctaatcca 432



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 247 cctgtattcaaccagatggctgagcagct 275
           |||| ||||||||||||||| ||||||||
Sbjct: 220 cctgcattcaaccagatggcagagcagct 248
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>emb|AL606487.15| Mouse DNA sequence from clone RP23-342L24 on chromosome 11, complete
            sequence
          Length = 136540

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 135  ggaggggttggcagctggtgc 155
            |||||||||||||||||||||
Sbjct: 3061 ggaggggttggcagctggtgc 3041
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>ref|XM_476131.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 969

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 9   cgccgcttcaccgcttcacc 28
           ||||||||||||||||||||
Sbjct: 613 cgccgcttcaccgcttcacc 632
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>gb|AC138341.9| Mus musculus chromosome 5, clone RP23-37N15, complete sequence
          Length = 176410

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 211   tctataagggagatggctgagcaa 234
             ||||||||| ||||||||||||||
Sbjct: 91830 tctataaggaagatggctgagcaa 91807
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>gb|AC130599.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0016G07, complete sequence
          Length = 123167

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     cgccgcttcaccgcttcacc 28
             ||||||||||||||||||||
Sbjct: 35912 cgccgcttcaccgcttcacc 35931
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>gb|AC135639.4| Mus musculus BAC clone RP23-330O16 from chromosome 7, complete sequence
          Length = 217404

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 297    aggggaacagggtgttccaa 316
              ||||||||||||||||||||
Sbjct: 113088 aggggaacagggtgttccaa 113107
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>gb|AC175612.4| Saimiri boliviensis boliviensis clone CH254-62B4, complete sequence
          Length = 57378

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 135  ggaggggttggcagctggtgcagg 158
            ||||||||||| ||||||||||||
Sbjct: 5077 ggaggggttggtagctggtgcagg 5054
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>emb|AL136988.17| Human DNA sequence from clone RP5-956O18 on chromosome 1q41-42.1
             Contains the 3' end of the GALNT2 gene for
             UDP-N-acetyl-alpha-D-galactosamine:polypeptide
             N-acetylgalactosaminyltransferase 2 (GalNAc-T2) and two
             novel genes, complete sequence
          Length = 73454

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    gcttcaccactgctgccttc 40
             ||||||||||||||||||||
Sbjct: 16994 gcttcaccactgctgccttc 16975
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>emb|CR936218.6| Human DNA sequence from clone RP11-669E14, complete sequence
          Length = 213739

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 158    gccttcccagtccttttgatttct 181
              |||||| |||||||||||||||||
Sbjct: 103343 gccttctcagtccttttgatttct 103320
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>emb|CR932417.12| Human DNA sequence from clone XX-D_24I13, complete sequence
          Length = 198202

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 158   gccttcccagtccttttgatttct 181
             |||||| |||||||||||||||||
Sbjct: 58434 gccttctcagtccttttgatttct 58411
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>emb|CR861361.1| Pongo pygmaeus mRNA; cDNA DKFZp459B042 (from clone DKFZp459B042)
          Length = 4267

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 31   tgctgccttcccttcctcgc 50
            ||||||||||||||||||||
Sbjct: 1133 tgctgccttcccttcctcgc 1114
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>gb|AC147932.3| Saimiri boliviensis boliviensis clone CH254-331B16, complete sequence
          Length = 185755

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 135    ggaggggttggcagctggtgcagg 158
              ||||||||||| ||||||||||||
Sbjct: 180288 ggaggggttggtagctggtgcagg 180265
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>gb|AC105347.4| Homo sapiens BAC clone RP11-719M16 from 4, complete sequence
          Length = 69570

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 266   ctgagcagcttcagaaaagt 285
             ||||||||||||||||||||
Sbjct: 64256 ctgagcagcttcagaaaagt 64237
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>gb|AF358770.1| Oryza sativa clone Osl81 apospory-associated protein mRNA, partial
           cds
          Length = 710

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 424 atgtccagtatgcttgagaacttgactagtcc 455
           |||||||||||||| ||||  |||||||||||
Sbjct: 4   atgtccagtatgctcgagagtttgactagtcc 35
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>gb|AC091628.2| Homo sapiens chromosome 17 map 17q21.1, complete sequence
          Length = 201397

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 158    gccttcccagtccttttgatttct 181
              |||||| |||||||||||||||||
Sbjct: 105141 gccttctcagtccttttgatttct 105164
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>emb|BX248108.11| Zebrafish DNA sequence from clone CH211-221P4, complete sequence
          Length = 230610

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 436    cttgagaacttgactagtccagct 459
              ||||||||||| ||||||||||||
Sbjct: 216418 cttgagaactttactagtccagct 216395
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 9       cgccgcttcaccgcttcacc 28
               ||||||||||||||||||||
Sbjct: 6664750 cgccgcttcaccgcttcacc 6664769
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>gb|AC010792.4|AC010792 Homo sapiens chromosome 17, clone -2524N8, complete sequence
          Length = 117406

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 158    gccttcccagtccttttgatttct 181
              |||||| |||||||||||||||||
Sbjct: 100642 gccttctcagtccttttgatttct 100665
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>emb|BX544879.6| Human DNA sequence from clone RP11-769P22 on chromosome 17, complete
             sequence
          Length = 177152

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 158   gccttcccagtccttttgatttct 181
             |||||| |||||||||||||||||
Sbjct: 40875 gccttctcagtccttttgatttct 40852


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,605,690
Number of Sequences: 3902068
Number of extensions: 3605690
Number of successful extensions: 61624
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61493
Number of HSP's gapped (non-prelim): 125
length of query: 464
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 442
effective length of database: 17,147,199,772
effective search space: 7579062299224
effective search space used: 7579062299224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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