ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast74e04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1T5AT_TAXCU (Q9M6F0) Taxadien-5-alpha-ol O-acetyltransferase (EC ... 30 3.1
2YYAP1_HUMAN (Q9H869) YY1-associated protein 1 (Hepatocellular ca... 29 6.9
3T5AT_TAXCH (Q8S9G6) Taxadien-5-alpha-ol O-acetyltransferase (EC ... 29 6.9
4YAI2_ENCCU (Q8SU95) Hypothetical protein ECU10_1820 28 9.1
5Y308_ENCCU (Q8SW79) Hypothetical protein ECU03_0080 28 9.1
6RL11_BIFLO (Q8G4T4) 50S ribosomal protein L11 28 9.1

>T5AT_TAXCU (Q9M6F0) Taxadien-5-alpha-ol O-acetyltransferase (EC 2.3.1.162)|
           (Taxa-4(20),11(12)-dien-5alpha-ol-O-acetyltransferase)
           (Taxadienol acetyltransferase)
          Length = 439

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
 Frame = +3

Query: 174 TPVRPGKTHELSALDNAMGRHA--VHLVLYCRAAPG---VDRDPLK---ESLSEALSLYP 329
           +P  P  T +LS++DN  G      + +L   A+P    +  DP K   E+L++ L  YP
Sbjct: 19  SPPLPKTTLQLSSIDNLPGVRGSIFNALLIYNASPSPTMISADPAKPIREALAKILVYYP 78

Query: 330 AMVGRL 347
              GRL
Sbjct: 79  PFAGRL 84



to top

>YYAP1_HUMAN (Q9H869) YY1-associated protein 1 (Hepatocellular carcinoma|
           susceptibility protein) (Hepatocellular
           carcinoma-associated protein 2)
          Length = 796

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +3

Query: 117 ATGPGSRVTRYAKSTAASVTPVRPGKTHELSA 212
           AT PGSR+TR+        + V PGK   L+A
Sbjct: 11  ATNPGSRLTRWPPPDKQEGSAVDPGKRRSLAA 42



to top

>T5AT_TAXCH (Q8S9G6) Taxadien-5-alpha-ol O-acetyltransferase (EC 2.3.1.162)|
           (Taxa-4(20),11(12)-dien-5alpha-ol-O-acetyltransferase)
           (Taxadienol acetyltransferase)
          Length = 439

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
 Frame = +3

Query: 186 PGKTHELSALDNAMGRHA--VHLVLYCRAAPG---VDRDPLK---ESLSEALSLYPAMVG 341
           P  T +LS++DN  G      + +L   A+P    V  DP K   E+L++ L  YP   G
Sbjct: 23  PKTTLQLSSIDNLPGVRGSIFNALLIYNASPSPTMVSADPAKLIREALAKILVYYPPFAG 82

Query: 342 RL 347
           RL
Sbjct: 83  RL 84



to top

>YAI2_ENCCU (Q8SU95) Hypothetical protein ECU10_1820|
          Length = 225

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -3

Query: 205 SSCVLPGRTGVTDAAVDLAYRVTRLPGPVARPVAV 101
           S C++PG+ G TD  +++   +  L  P+A  V+V
Sbjct: 96  SCCLVPGQIGFTDTGINILIDILILVHPMANLVSV 130



to top

>Y308_ENCCU (Q8SW79) Hypothetical protein ECU03_0080|
          Length = 225

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 12/35 (34%), Positives = 21/35 (60%)
 Frame = -3

Query: 205 SSCVLPGRTGVTDAAVDLAYRVTRLPGPVARPVAV 101
           S C++PG+ G TD  +++   +  L  P+A  V+V
Sbjct: 96  SCCLVPGQIGFTDTGINILIDILILVHPMANLVSV 130



to top

>RL11_BIFLO (Q8G4T4) 50S ribosomal protein L11|
          Length = 143

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 13/58 (22%), Positives = 30/58 (51%)
 Frame = +3

Query: 153 KSTAASVTPVRPGKTHELSALDNAMGRHAVHLVLYCRAAPGVDRDPLKESLSEALSLY 326
           K +A     ++ GK +    L  A+G H V+++ +C+A     +D + + +   +++Y
Sbjct: 6   KVSALIKLQIQAGKANPAPPLGPALGSHGVNIMDFCKAYNAQTQDKMGQVIPVEITVY 63


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.311    0.126    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,970,761
Number of Sequences: 219361
Number of extensions: 691554
Number of successful extensions: 2540
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2538
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
to top