ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast74e02 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK121986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108P09, full insert sequence Length = 928 Score = 349 bits (176), Expect = 5e-93 Identities = 278/312 (89%) Strand = Plus / Plus Query: 44 cggcggcgggttccgcgacgagggccctccagccgaagtcgtcgaggtctcgacgttcct 103 ||||||||||||||||||||||||||| || ||||| ||||||||||| ||||||||| | Sbjct: 201 cggcggcgggttccgcgacgagggccccccggccgaggtcgtcgaggtgtcgacgttcat 260 Query: 104 gcacgcctgcgagggggacgcggtaacgaagctgacgaacgagaaagtgccctactttag 163 |||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||| | Sbjct: 261 gcacgcgtgcgagggggacgcggtgacgaagctgacgaacgagaaggtgccctacttcaa 320 Query: 164 cgcgcccatatacctccagaacaagacccagatcggcaaagtcgacgagatcttcggccc 223 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 321 cgcgcccatctacctccagaacaagacccagatcggcaaggtcgacgagatcttcggccc 380 Query: 224 catcaacgaatcatatttctcggtcaagatgtttgagggagtcattgcaacatcttacaa 283 |||||||||||| |||||| | |||||| | ||||| |||||||||| || |||| Sbjct: 381 catcaacgaatcccttttctccattaagatgctggaggggatcattgcaacttcatacag 440 Query: 284 cgaaggtgataagttcttcattgaccccatgaagctgctgcccctctcacgcttcctgcc 343 ||||| |||||||||| ||| |||||||||||||| |||| |||||||||||| |||| Sbjct: 441 tgaaggcgataagttctacatcgaccccatgaagcttttgcctctctcacgcttcttgcc 500 Query: 344 gcagccaaaggg 355 ||||||||||| Sbjct: 501 acagccaaaggg 512 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 409 gtggtggattccgtggaagaggtgcaccaaggggccgtgg 448 ||||||| ||||||||||||||||| |||||||||||||| Sbjct: 581 gtggtggcttccgtggaagaggtgcgccaaggggccgtgg 620
>gb|AY108045.1| Zea mays PCO088666 mRNA sequence Length = 871 Score = 303 bits (153), Expect = 3e-79 Identities = 273/313 (87%) Strand = Plus / Plus Query: 43 tcggcggcgggttccgcgacgagggccctccagccgaagtcgtcgaggtctcgacgttcc 102 |||||||||||||||||||||||||||| || || || ||||||||||| ||||||||| Sbjct: 239 tcggcggcgggttccgcgacgagggcccgcccgcagaggtcgtcgaggtgtcgacgttcg 298 Query: 103 tgcacgcctgcgagggggacgcggtaacgaagctgacgaacgagaaagtgccctacttta 162 ||||||| |||||||| |||||||| ||||| || || |||||||| ||||||||||| | Sbjct: 299 tgcacgcgtgcgagggagacgcggtgacgaaactcaccaacgagaaggtgccctacttca 358 Query: 163 gcgcgcccatatacctccagaacaagacccagatcggcaaagtcgacgagatcttcggcc 222 ||||||||||||||| ||||||||||| ||| ||||||| ||||||||||||||||||| Sbjct: 359 acgcgcccatatacctgcagaacaagactcaggtcggcaaggtcgacgagatcttcggcc 418 Query: 223 ccatcaacgaatcatatttctcggtcaagatgtttgagggagtcattgcaacatcttaca 282 ||||||||||||| |||||||| || |||||| | || || ||||||||||||| |||| Sbjct: 419 ccatcaacgaatcctatttctctgtgaagatgatggaagggatcattgcaacatcgtaca 478 Query: 283 acgaaggtgataagttcttcattgaccccatgaagctgctgcccctctcacgcttcctgc 342 | ||||| || ||||||| || ||||||||||| ||||||| || || |||||||||| Sbjct: 479 aggaaggcgacaagttctatatcgaccccatgaaattgctgcctctttcgcgcttcctgc 538 Query: 343 cgcagccaaaggg 355 |||| |||||||| Sbjct: 539 cgcaaccaaaggg 551
>gb|BT017445.1| Zea mays clone EL01N0406A03.c mRNA sequence Length = 866 Score = 297 bits (150), Expect = 2e-77 Identities = 272/313 (86%) Strand = Plus / Plus Query: 43 tcggcggcgggttccgcgacgagggccctccagccgaagtcgtcgaggtctcgacgttcc 102 |||||||||||||||||||||||||||| || || || ||||||||||| |||||||||| Sbjct: 180 tcggcggcgggttccgcgacgagggcccgcccgcggaggtcgtcgaggtttcgacgttcc 239 Query: 103 tgcacgcctgcgagggggacgcggtaacgaagctgacgaacgagaaagtgccctacttta 162 ||||||| ||||||||||| ||||| || ||||| || |||||||| ||||||||||| | Sbjct: 240 tgcacgcgtgcgagggggaggcggtgacnaagctcaccaacgagaaggtgccctacttca 299 Query: 163 gcgcgcccatatacctccagaacaagacccagatcggcaaagtcgacgagatcttcggcc 222 ||||||||| || || ||||||||||||||||||||||| || || ||||||||||||| Sbjct: 300 acgcgcccatctatctgcagaacaagacccagatcggcaaggttgaagagatcttcggcc 359 Query: 223 ccatcaacgaatcatatttctcggtcaagatgtttgagggagtcattgcaacatcttaca 282 ||||||||||||| |||||||| || |||||| | ||||| ||||||||||||| |||| Sbjct: 360 ccatcaacgaatcctatttctctgtgaagatgatggaggggatcattgcaacatcgtaca 419 Query: 283 acgaaggtgataagttcttcattgaccccatgaagctgctgcccctctcacgcttcctgc 342 | ||||| || ||||||| || ||||| ||||| ||||||| ||||||||||||||| Sbjct: 420 atgaaggcgacaagttctatatcgacccaatgaaattgctgccggtctcacgcttcctgc 479 Query: 343 cgcagccaaaggg 355 | || |||||||| Sbjct: 480 cacaaccaaaggg 492
>gb|AC137589.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0072L08, complete sequence Length = 152272 Score = 224 bits (113), Expect = 2e-55 Identities = 140/149 (93%) Strand = Plus / Plus Query: 87 gaggtctcgacgttcctgcacgcctgcgagggggacgcggtaacgaagctgacgaacgag 146 ||||| ||||||||| ||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 39049 gaggtgtcgacgttcatgcacgcgtgcgagggggacgcggtgacgaagctgacgaacgag 39108 Query: 147 aaagtgccctactttagcgcgcccatatacctccagaacaagacccagatcggcaaagtc 206 || ||||||||||| | ||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 39109 aaggtgccctacttcaacgcgcccatctacctccagaacaagacccagatcggcaaggtc 39168 Query: 207 gacgagatcttcggccccatcaacgaatc 235 ||||||||||||||||||||||||||||| Sbjct: 39169 gacgagatcttcggccccatcaacgaatc 39197 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 265 tcattgcaacatcttacaacgaaggtgataagttcttcattgaccccatgaagctgctgc 324 |||||||||| || |||| ||||| |||||||||| ||| |||||||||||||| ||| Sbjct: 39712 tcattgcaacttcatacagtgaaggcgataagttctacatcgaccccatgaagcttttgc 39771 Query: 325 ccctctcacgcttcctgccgcagccaaag 353 | |||||||||||| |||| ||||||||| Sbjct: 39772 ctctctcacgcttcttgccacagccaaag 39800 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 409 gtggtggattccgtggaagaggtgcaccaaggggccgtgg 448 ||||||| ||||||||||||||||| |||||||||||||| Sbjct: 40325 gtggtggcttccgtggaagaggtgcgccaaggggccgtgg 40364 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 44 cggcggcgggttccgcgacgagggccctccagccgaagtcgtcg 87 ||||||||||||||||||||||||||| || ||||| ||||||| Sbjct: 38899 cggcggcgggttccgcgacgagggccccccggccgaggtcgtcg 38942
>gb|AC144558.1| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0072L08, sequencing in progress, complete sequence Length = 152272 Score = 224 bits (113), Expect = 2e-55 Identities = 140/149 (93%) Strand = Plus / Plus Query: 87 gaggtctcgacgttcctgcacgcctgcgagggggacgcggtaacgaagctgacgaacgag 146 ||||| ||||||||| ||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 39049 gaggtgtcgacgttcatgcacgcgtgcgagggggacgcggtgacgaagctgacgaacgag 39108 Query: 147 aaagtgccctactttagcgcgcccatatacctccagaacaagacccagatcggcaaagtc 206 || ||||||||||| | ||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 39109 aaggtgccctacttcaacgcgcccatctacctccagaacaagacccagatcggcaaggtc 39168 Query: 207 gacgagatcttcggccccatcaacgaatc 235 ||||||||||||||||||||||||||||| Sbjct: 39169 gacgagatcttcggccccatcaacgaatc 39197 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 265 tcattgcaacatcttacaacgaaggtgataagttcttcattgaccccatgaagctgctgc 324 |||||||||| || |||| ||||| |||||||||| ||| |||||||||||||| ||| Sbjct: 39712 tcattgcaacttcatacagtgaaggcgataagttctacatcgaccccatgaagcttttgc 39771 Query: 325 ccctctcacgcttcctgccgcagccaaag 353 | |||||||||||| |||| ||||||||| Sbjct: 39772 ctctctcacgcttcttgccacagccaaag 39800 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 409 gtggtggattccgtggaagaggtgcaccaaggggccgtgg 448 ||||||| ||||||||||||||||| |||||||||||||| Sbjct: 40325 gtggtggcttccgtggaagaggtgcgccaaggggccgtgg 40364 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 44 cggcggcgggttccgcgacgagggccctccagccgaagtcgtcg 87 ||||||||||||||||||||||||||| || ||||| ||||||| Sbjct: 38899 cggcggcgggttccgcgacgagggccccccggccgaggtcgtcg 38942
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 224 bits (113), Expect = 2e-55 Identities = 140/149 (93%) Strand = Plus / Plus Query: 87 gaggtctcgacgttcctgcacgcctgcgagggggacgcggtaacgaagctgacgaacgag 146 ||||| ||||||||| ||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 21036734 gaggtgtcgacgttcatgcacgcgtgcgagggggacgcggtgacgaagctgacgaacgag 21036793 Query: 147 aaagtgccctactttagcgcgcccatatacctccagaacaagacccagatcggcaaagtc 206 || ||||||||||| | ||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 21036794 aaggtgccctacttcaacgcgcccatctacctccagaacaagacccagatcggcaaggtc 21036853 Query: 207 gacgagatcttcggccccatcaacgaatc 235 ||||||||||||||||||||||||||||| Sbjct: 21036854 gacgagatcttcggccccatcaacgaatc 21036882 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 265 tcattgcaacatcttacaacgaaggtgataagttcttcattgaccccatgaagctgctgc 324 |||||||||| || |||| ||||| |||||||||| ||| |||||||||||||| ||| Sbjct: 21037397 tcattgcaacttcatacagtgaaggcgataagttctacatcgaccccatgaagcttttgc 21037456 Query: 325 ccctctcacgcttcctgccgcagccaaag 353 | |||||||||||| |||| ||||||||| Sbjct: 21037457 ctctctcacgcttcttgccacagccaaag 21037485 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 409 gtggtggattccgtggaagaggtgcaccaaggggccgtgg 448 ||||||| ||||||||||||||||| |||||||||||||| Sbjct: 21038010 gtggtggcttccgtggaagaggtgcgccaaggggccgtgg 21038049 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 44 cggcggcgggttccgcgacgagggccctccagccgaagtcgtcg 87 ||||||||||||||||||||||||||| || ||||| ||||||| Sbjct: 21036584 cggcggcgggttccgcgacgagggccccccggccgaggtcgtcg 21036627 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcag 25 ||||||||||||||||||||||| Sbjct: 18417233 ggcggccgcggcggcggcggcag 18417255 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 24619936 ggcggccgcggcggcggcggc 24619956 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 22851883 ggcggccgcggcggcggcggc 22851863 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagg 26 |||||| ||||||||||||||||| Sbjct: 24077401 ggcggcggcggcggcggcggcagg 24077424 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 4 gcggccgcggcggcggcggcaggggacg 31 ||||| ||||||||||||||||| |||| Sbjct: 13475519 gcggcggcggcggcggcggcaggtgacg 13475492 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 cggccgcggcggcggcggcagggg 28 |||| ||||||||||||||||||| Sbjct: 6316593 cggctgcggcggcggcggcagggg 6316570 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gcggccgcggcggcggcggc 23 |||||||||||||||||||| Sbjct: 3991421 gcggccgcggcggcggcggc 3991402 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagg 26 |||||| ||||||||||||||||| Sbjct: 3910981 ggcggcggcggcggcggcggcagg 3910958 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gcggccgcggcggcggcggc 23 |||||||||||||||||||| Sbjct: 3776461 gcggccgcggcggcggcggc 3776442 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagg 26 |||||| ||||||||||||||||| Sbjct: 3288677 ggcggcggcggcggcggcggcagg 3288654
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 224 bits (113), Expect = 2e-55 Identities = 140/149 (93%) Strand = Plus / Plus Query: 87 gaggtctcgacgttcctgcacgcctgcgagggggacgcggtaacgaagctgacgaacgag 146 ||||| ||||||||| ||||||| ||||||||||||||||| |||||||||||||||||| Sbjct: 21346975 gaggtgtcgacgttcatgcacgcgtgcgagggggacgcggtgacgaagctgacgaacgag 21347034 Query: 147 aaagtgccctactttagcgcgcccatatacctccagaacaagacccagatcggcaaagtc 206 || ||||||||||| | ||||||||| ||||||||||||||||||||||||||||| ||| Sbjct: 21347035 aaggtgccctacttcaacgcgcccatctacctccagaacaagacccagatcggcaaggtc 21347094 Query: 207 gacgagatcttcggccccatcaacgaatc 235 ||||||||||||||||||||||||||||| Sbjct: 21347095 gacgagatcttcggccccatcaacgaatc 21347123 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 265 tcattgcaacatcttacaacgaaggtgataagttcttcattgaccccatgaagctgctgc 324 |||||||||| || |||| ||||| |||||||||| ||| |||||||||||||| ||| Sbjct: 21347638 tcattgcaacttcatacagtgaaggcgataagttctacatcgaccccatgaagcttttgc 21347697 Query: 325 ccctctcacgcttcctgccgcagccaaag 353 | |||||||||||| |||| ||||||||| Sbjct: 21347698 ctctctcacgcttcttgccacagccaaag 21347726 Score = 63.9 bits (32), Expect = 4e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 409 gtggtggattccgtggaagaggtgcaccaaggggccgtgg 448 ||||||| ||||||||||||||||| |||||||||||||| Sbjct: 21348251 gtggtggcttccgtggaagaggtgcgccaaggggccgtgg 21348290 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 44 cggcggcgggttccgcgacgagggccctccagccgaagtcgtcg 87 ||||||||||||||||||||||||||| || ||||| ||||||| Sbjct: 21346825 cggcggcgggttccgcgacgagggccccccggccgaggtcgtcg 21346868 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcag 25 ||||||||||||||||||||||| Sbjct: 18576634 ggcggccgcggcggcggcggcag 18576656 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 24931606 ggcggccgcggcggcggcggc 24931626 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 23161793 ggcggccgcggcggcggcggc 23161773 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagg 26 |||||| ||||||||||||||||| Sbjct: 24389070 ggcggcggcggcggcggcggcagg 24389093 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 4 gcggccgcggcggcggcggcaggggacg 31 ||||| ||||||||||||||||| |||| Sbjct: 13555698 gcggcggcggcggcggcggcaggtgacg 13555671 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 5 cggccgcggcggcggcggcagggg 28 |||| ||||||||||||||||||| Sbjct: 6383060 cggctgcggcggcggcggcagggg 6383037 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gcggccgcggcggcggcggc 23 |||||||||||||||||||| Sbjct: 4000115 gcggccgcggcggcggcggc 4000096 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagg 26 |||||| ||||||||||||||||| Sbjct: 3919675 ggcggcggcggcggcggcggcagg 3919652 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gcggccgcggcggcggcggc 23 |||||||||||||||||||| Sbjct: 3785155 gcggccgcggcggcggcggc 3785136 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagg 26 |||||| ||||||||||||||||| Sbjct: 3297390 ggcggcggcggcggcggcggcagg 3297367
>gb|AE017349.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 9, complete sequence Length = 1178688 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 153 ccctactttagcgcgcccatatacctccagaacaagacccagatcggcaaagtcgacgag 212 |||||||| | ||| ||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct: 1064516 ccctacttcaacgcccccatctacctccaaaacaagacccagatcggcaaggtcgacgag 1064575 Query: 213 atcttcggccccatcaacgaa 233 || |||| || ||||||||| Sbjct: 1064576 attctcggtcctatcaacgaa 1064596
>ref|XM_572900.1| Cryptococcus neoformans var. neoformans JEC21 small nucleolar RNP protein (CNI03970) partial mRNA Length = 685 Score = 81.8 bits (41), Expect = 2e-12 Identities = 71/81 (87%) Strand = Plus / Plus Query: 153 ccctactttagcgcgcccatatacctccagaacaagacccagatcggcaaagtcgacgag 212 |||||||| | ||| ||||| |||||||| |||||||||||||||||||| ||||||||| Sbjct: 193 ccctacttcaacgcccccatctacctccaaaacaagacccagatcggcaaggtcgacgag 252 Query: 213 atcttcggccccatcaacgaa 233 || |||| || ||||||||| Sbjct: 253 attctcggtcctatcaacgaa 273
>ref|XM_502208.1| Yarrowia lipolytica CLIB122, YALI0C24057g predicted mRNA Length = 606 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 153 ccctactttagcgcgcccatatacctccagaacaagacccagatcggcaaagtcgacgag 212 |||||||| | ||| ||||| ||||| |||||||||||||| ||||||| ||||||||| Sbjct: 148 ccctacttcaacgcccccatttaccttgagaacaagacccaggtcggcaaggtcgacgag 207 Query: 213 atcttcggccccatcaacga 232 || | |||||||| ||||| Sbjct: 208 attcttggccccatgaacga 227
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 63.9 bits (32), Expect = 4e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 153 ccctactttagcgcgcccatatacctccagaacaagacccagatcggcaaagtcgacgag 212 |||||||| | ||| ||||| ||||| |||||||||||||| ||||||| ||||||||| Sbjct: 3218649 ccctacttcaacgcccccatttaccttgagaacaagacccaggtcggcaaggtcgacgag 3218590 Query: 213 atcttcggccccatcaacga 232 || | |||||||| ||||| Sbjct: 3218589 attcttggccccatgaacga 3218570
>gb|BC045900.1| Danio rerio nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs), mRNA (cDNA clone MGC:56086 IMAGE:5410477), complete cds Length = 1284 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 294 aagttcttcattgaccccatgaagctgctgcccct 328 ||||||| ||||||||||||||||||||| ||||| Sbjct: 484 aagttctacattgaccccatgaagctgcttcccct 518
>ref|NM_200975.1| Danio rerio nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs) (nola1), mRNA Length = 1284 Score = 54.0 bits (27), Expect = 4e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 294 aagttcttcattgaccccatgaagctgctgcccct 328 ||||||| ||||||||||||||||||||| ||||| Sbjct: 484 aagttctacattgaccccatgaagctgcttcccct 518
>ref|XM_459686.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0E09251g) partial mRNA Length = 990 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 390 ggtgttgctcgtggtggccgtggtggat 417 |||| ||||||||||||||||||||||| Sbjct: 79 ggtggtgctcgtggtggccgtggtggat 106
>emb|CR382137.1| Debaryomyces hansenii chromosome E of strain CBS767 of Debaryomyces hansenii Length = 2037969 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Minus Query: 390 ggtgttgctcgtggtggccgtggtggat 417 |||| ||||||||||||||||||||||| Sbjct: 676084 ggtggtgctcgtggtggccgtggtggat 676057
>dbj|AK054663.1| Homo sapiens cDNA FLJ30101 fis, clone BNGH41000118, highly similar to Homo sapiens low density lipoprotein receptor related protein-deleted in tumor (LRPDIT) mRNA Length = 2624 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcaggggacgctt 34 |||||| ||||||||||||||||||| ||||| Sbjct: 222 ggcggcggcggcggcggcggcaggggccgctt 191
>ref|NM_191421.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 732 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 gaggcggccgcggcggcggcggc 23 ||||||||||||||||||||||| Sbjct: 95 gaggcggccgcggcggcggcggc 73
>ref|NM_191345.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 783 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcag 25 ||||||||||||||||||||||| Sbjct: 135 ggcggccgcggcggcggcggcag 113
>gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0056I10, complete sequence Length = 158833 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcag 25 ||||||||||||||||||||||| Sbjct: 152598 ggcggccgcggcggcggcggcag 152620
>ref|XM_888675.2| PREDICTED: Mus musculus AT rich interactive domain 1B (Swi1 like), transcript variant 2 (Arid1b), mRNA Length = 11205 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcag 25 ||||||||||||||||||||||| Sbjct: 891 ggcggccgcggcggcggcggcag 913
>ref|XM_139711.8| PREDICTED: Mus musculus AT rich interactive domain 1B (Swi1 like), transcript variant 1 (Arid1b), mRNA Length = 11325 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcag 25 ||||||||||||||||||||||| Sbjct: 891 ggcggccgcggcggcggcggcag 913
>ref|XM_973595.1| PREDICTED: Mus musculus AT rich interactive domain 1B (Swi1 like) (Arid1b), mRNA Length = 11836 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcag 25 ||||||||||||||||||||||| Sbjct: 1362 ggcggccgcggcggcggcggcag 1384
>ref|XM_983766.1| PREDICTED: Mus musculus AT rich interactive domain 1B (Swi1 like) (Arid1b), mRNA Length = 11501 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcag 25 ||||||||||||||||||||||| Sbjct: 1028 ggcggccgcggcggcggcggcag 1050
>ref|XM_843990.1| PREDICTED: Canis familiaris similar to sin3 associated polypeptide p30 (LOC607359), mRNA Length = 872 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 gaggcggccgcggcggcggcggc 23 ||||||||||||||||||||||| Sbjct: 92 gaggcggccgcggcggcggcggc 70
>ref|XM_386548.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG06372.1) partial mRNA Length = 654 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/35 (91%) Strand = Plus / Plus Query: 196 tcggcaaagtcgacgagatcttcggccccatcaac 230 ||||||| ||||||||| || |||||||||||||| Sbjct: 221 tcggcaaggtcgacgaggtcctcggccccatcaac 255
>gb|AF521671.1| Homo sapiens SWI/SNF chromatin remodeling complex subunit OSA2 (OSA2) mRNA, partial cds Length = 7757 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcag 25 ||||||||||||||||||||||| Sbjct: 810 ggcggccgcggcggcggcggcag 832
>gb|AC126929.3| Mus musculus BAC clone RP24-465A20 from chromosome 17, complete sequence Length = 168712 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcag 25 ||||||||||||||||||||||| Sbjct: 28531 ggcggccgcggcggcggcggcag 28553
>ref|NM_017519.1| Homo sapiens AT rich interactive domain 1B (SWI1-like) (ARID1B), transcript variant 1, mRNA Length = 8246 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcag 25 ||||||||||||||||||||||| Sbjct: 1001 ggcggccgcggcggcggcggcag 1023
>ref|NM_020732.2| Homo sapiens AT rich interactive domain 1B (SWI1-like) (ARID1B), transcript variant 2, mRNA Length = 8126 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcag 25 ||||||||||||||||||||||| Sbjct: 1001 ggcggccgcggcggcggcggcag 1023
>ref|NM_175863.2| Homo sapiens AT rich interactive domain 1B (SWI1-like) (ARID1B), transcript variant 3, mRNA Length = 8087 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcag 25 ||||||||||||||||||||||| Sbjct: 1001 ggcggccgcggcggcggcggcag 1023
>emb|AL355297.20| Human DNA sequence from clone RP11-230C9 on chromosome 6 Contains the gene for DAN15 protein, a H3 histone, family 3A (H3F3A) (H3F3, H3.3A) pseudogene, the 5' end of the gene for BRG1-binding protein ELD/OSA1 (p250R KIAA1235) and four CpG islands, complete sequence Length = 169218 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcag 25 ||||||||||||||||||||||| Sbjct: 153830 ggcggccgcggcggcggcggcag 153852
>emb|AL158013.25| Human DNA sequence from clone RP11-227D2 on chromosome 20 Contains the 3' end of the XRN2 gene for 5'-3' exoribonuclease 2, the NKX2-4 gene for NK2 transcription factor related locus 4 (Drosophila), a putative novel gene and two CpG islands, complete sequence Length = 51129 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcag 25 ||||||||||||||||||||||| Sbjct: 43760 ggcggccgcggcggcggcggcag 43738
>ref|XM_962170.1| PREDICTED: Tribolium castaneum similar to CG6987-PA (LOC655610), mRNA Length = 1018 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 6 ggccgcggcggcggcggcaggggacgc 32 |||||||||||||||| |||||||||| Sbjct: 271 ggccgcggcggcggcgacaggggacgc 297
>ref|NM_009900.1| Mus musculus chloride channel 2 (Clcn2), mRNA Length = 3148 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggga 29 ||||||||||||||||||||| ||||| Sbjct: 140 ggcggccgcggcggcggcggcggggga 166
>gb|AC015689.12| Homo sapiens chromosome 11, clone RP11-23F23, complete sequence Length = 182522 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcag 25 ||||||||||||||||||||||| Sbjct: 29788 ggcggccgcggcggcggcggcag 29766
>dbj|AK141656.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030011H03 product:chloride channel 2, full insert sequence Length = 3945 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggga 29 ||||||||||||||||||||| ||||| Sbjct: 1297 ggcggccgcggcggcggcggcggggga 1323
>gb|AF202037.1|AF202037 Homo sapiens homeobox transcription factor (NKX2-4) gene, partial cds Length = 1291 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcag 25 ||||||||||||||||||||||| Sbjct: 228 ggcggccgcggcggcggcggcag 250
>ref|XM_940179.1| PREDICTED: Homo sapiens similar to Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4) (Homeobox protein NK-2 homolog D) (LOC651062), mRNA Length = 1741 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcag 25 ||||||||||||||||||||||| Sbjct: 522 ggcggccgcggcggcggcggcag 544
>ref|XM_927653.1| PREDICTED: Homo sapiens similar to Homeobox protein Nkx-2.4 (Homeobox protein NKX2.4) (Homeobox protein NK-2 homolog D) (LOC644524), mRNA Length = 1741 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcag 25 ||||||||||||||||||||||| Sbjct: 522 ggcggccgcggcggcggcggcag 544
>gb|AF391285.1|AF391285 Homo sapiens 11p15.5 clone LOH11A, partial sequence Length = 160199 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcag 25 ||||||||||||||||||||||| Sbjct: 40259 ggcggccgcggcggcggcggcag 40237
>dbj|AK165000.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched library, clone:E130114N01 product:chloride channel 2, full insert sequence Length = 3513 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggga 29 ||||||||||||||||||||| ||||| Sbjct: 190 ggcggccgcggcggcggcggcggggga 216
>dbj|AK172148.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830048E20 product:chloride channel 2, full insert sequence Length = 3757 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggga 29 ||||||||||||||||||||| ||||| Sbjct: 141 ggcggccgcggcggcggcggcggggga 167
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1 gaggcggccgcggcggcggcggc 23 ||||||||||||||||||||||| Sbjct: 32534754 gaggcggccgcggcggcggcggc 32534776 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcag 25 ||||||||||||||||||||||| Sbjct: 32087861 ggcggccgcggcggcggcggcag 32087883 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2 aggcggccgcggcggcggcggc 23 |||||||||||||||||||||| Sbjct: 27190484 aggcggccgcggcggcggcggc 27190463 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaggcggccgcggcggcggcgg 22 |||||||||||||||||||||| Sbjct: 5799861 gaggcggccgcggcggcggcgg 5799882 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 7 gccgcggcggcggcggcaggg 27 ||||||||||||||||||||| Sbjct: 42357710 gccgcggcggcggcggcaggg 42357690 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 40183913 ggcggccgcggcggcggcggc 40183893 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcaggg 27 |||||| |||||||||||||||||| Sbjct: 30850037 ggcggcggcggcggcggcggcaggg 30850061 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcaggg 27 |||||| |||||||||||||||||| Sbjct: 20787614 ggcggcggcggcggcggcggcaggg 20787638 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcgg 22 |||||||||||||||||||| Sbjct: 41194412 ggcggccgcggcggcggcgg 41194431 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 gcggccgcggcggcggcggc 23 |||||||||||||||||||| Sbjct: 37976403 gcggccgcggcggcggcggc 37976422 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 gcggccgcggcggcggcggc 23 |||||||||||||||||||| Sbjct: 27575478 gcggccgcggcggcggcggc 27575497 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 cggccgcggcggcggcggca 24 |||||||||||||||||||| Sbjct: 21935221 cggccgcggcggcggcggca 21935202 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gcggccgcggcggcggcggc 23 |||||||||||||||||||| Sbjct: 20591738 gcggccgcggcggcggcggc 20591719
>gb|AF253515.1| Homo sapiens BAF250b subunit mRNA, complete cds Length = 6361 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcag 25 ||||||||||||||||||||||| Sbjct: 217 ggcggccgcggcggcggcggcag 239
>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512C01 Length = 176261 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcag 25 ||||||||||||||||||||||| Sbjct: 129675 ggcggccgcggcggcggcggcag 129697
>ref|XM_579457.1| PREDICTED: Rattus norvegicus achaete-scute complex homolog-like 1 (Drosophila) (Ascl1), mRNA Length = 1491 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcag 25 ||||||||||||||||||||||| Sbjct: 666 ggcggccgcggcggcggcggcag 688
>dbj|AP003106.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0665A11 Length = 166421 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 1 gaggcggccgcggcggcggcggc 23 ||||||||||||||||||||||| Sbjct: 122275 gaggcggccgcggcggcggcggc 122297
>dbj|AK106478.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-C12, full insert sequence Length = 1263 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 1 gaggcggccgcggcggcggcggc 23 ||||||||||||||||||||||| Sbjct: 127 gaggcggccgcggcggcggcggc 105
>gb|AC148877.2| Chlamydomonas reinhardtii clone cr-11B1, complete sequence Length = 52591 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcag 25 ||||||||||||||||||||||| Sbjct: 1163 ggcggccgcggcggcggcggcag 1141 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 gaggcggccgcggcggcggcggca 24 |||||||| ||||||||||||||| Sbjct: 29243 gaggcggcggcggcggcggcggca 29266
>gb|AF097415.1|AF097415 Mus musculus chloride channel CLC-2 (Clcn2) mRNA, complete cds Length = 3148 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggga 29 ||||||||||||||||||||| ||||| Sbjct: 140 ggcggccgcggcggcggcggcggggga 166
>gb|AF139724.1|AF139724 Mus musculus voltage-regulated and volume-regulated chloride channel ClC-2 mRNA, complete cds Length = 3107 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggga 29 ||||||||||||||||||||| ||||| Sbjct: 91 ggcggccgcggcggcggcggcggggga 117
>emb|CT010490.10| Mouse DNA sequence from clone RP23-148P12 on chromosome 16, complete sequence Length = 206348 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagggga 29 ||||||||||||||||||||| ||||| Sbjct: 61215 ggcggccgcggcggcggcggcggggga 61189
>dbj|AB208795.1| Homo sapiens mRNA for ubiquitously transcribed tetratricopeptide repeat variant protein Length = 5372 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Minus Query: 2 aggcggccgcggcggcggcggcagggg 28 ||||||| ||||||||||||||||||| Sbjct: 167 aggcggcggcggcggcggcggcagggg 141
>emb|AJ001216.1|HSCGGE7 Homo sapiens DNA for (CGG)n trinucleotide repeat region, isolate E7 Length = 6170 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcag 25 ||||||||||||||||||||||| Sbjct: 2009 ggcggccgcggcggcggcggcag 1987
>gb|AY279384.1| Homo sapiens migration-inducing protein 5 (MIG5) mRNA, complete cds Length = 833 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ggccgcggcggcggcggcaggg 27 |||||||||||||||||||||| Sbjct: 143 ggccgcggcggcggcggcaggg 122
>gb|BC064461.1| Mus musculus suppressor of zeste 12 homolog (Drosophila), mRNA (cDNA clone MGC:69864 IMAGE:6821922), complete cds Length = 4448 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggg 28 ||||||||||||||||||||| |||| Sbjct: 391 ggcggccgcggcggcggcggcggggg 416
>ref|NM_188346.1| Oryza sativa (japonica cultivar-group), Ozsa8097 predicted mRNA Length = 1434 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaggcggccgcggcggcggcgg 22 |||||||||||||||||||||| Sbjct: 1153 gaggcggccgcggcggcggcgg 1174
>gb|AC149057.7| Mus musculus BAC clone RP23-345D18 from chromosome 7, complete sequence Length = 189323 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 40306 ggcggcggcggcggcggcggcagggg 40331
>ref|XM_466214.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2425 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 gaggcggccgcggcggcggcgg 22 |||||||||||||||||||||| Sbjct: 81 gaggcggccgcggcggcggcgg 60
>ref|NM_197855.1| Oryza sativa (japonica cultivar-group) putative carnitine/acylcarnitine translocase (OSJNBa0003O19.8), mRNA Length = 1105 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1 gaggcggccgcggcggcggcggcagg 26 |||||||| ||||||||||||||||| Sbjct: 452 gaggcggcagcggcggcggcggcagg 427
>ref|XM_507437.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1008_C03.25-1 mRNA Length = 1410 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 621 ggcggcggcggcggcggcggcagggg 596
>ref|XM_464156.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1404 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 613 ggcggcggcggcggcggcggcagggg 588
>ref|XM_506719.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1008_C03.25-1 mRNA Length = 2045 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 622 ggcggcggcggcggcggcggcagggg 597
>ref|XM_507436.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1008_C03.13-1 mRNA Length = 1407 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 621 ggcggcggcggcggcggcggcagggg 596
>ref|XM_464149.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1401 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 613 ggcggcggcggcggcggcggcagggg 588
>ref|XM_506718.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1008_C03.13-1 mRNA Length = 2045 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 622 ggcggcggcggcggcggcggcagggg 597
>ref|XM_506708.1| PREDICTED Oryza sativa (japonica cultivar-group), P0030G11.14 mRNA Length = 2311 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 4 gcggccgcggcggcggcggcag 25 |||||||||||||||||||||| Sbjct: 134 gcggccgcggcggcggcggcag 155
>ref|XM_464027.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2311 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 4 gcggccgcggcggcggcggcag 25 |||||||||||||||||||||| Sbjct: 134 gcggccgcggcggcggcggcag 155
>ref|XM_518960.1| PREDICTED: Pan troglodytes similar to RAS-related C3 botulinum substrate 1 (LOC463253), mRNA Length = 1046 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ggccgcggcggcggcggcaggg 27 |||||||||||||||||||||| Sbjct: 312 ggccgcggcggcggcggcaggg 291
>ref|NM_191908.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1698 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2 aggcggccgcggcggcggcggc 23 |||||||||||||||||||||| Sbjct: 1286 aggcggccgcggcggcggcggc 1307
>gb|AF067777.1| Homo sapiens map 2p11.2; 83cM from GATA85A06 repeat region, complete sequence Length = 201 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 94 ggcggcggcggcggcggcggcagggg 119
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggca 24 |||||||||||||||||||||| Sbjct: 537671 ggcggccgcggcggcggcggca 537650
>gb|BC028483.1| Mus musculus Ras interacting protein 1, mRNA (cDNA clone IMAGE:1246468) Length = 608 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 258 ggcggcggcggcggcggcggcagggg 233
>ref|NM_006908.3| Homo sapiens ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) (RAC1), transcript variant Rac1, mRNA Length = 2355 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ggccgcggcggcggcggcaggg 27 |||||||||||||||||||||| Sbjct: 226 ggccgcggcggcggcggcaggg 205
>ref|NM_198829.1| Homo sapiens ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) (RAC1), transcript variant Rac1c, mRNA Length = 2413 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ggccgcggcggcggcggcaggg 27 |||||||||||||||||||||| Sbjct: 226 ggccgcggcggcggcggcaggg 205
>ref|NM_018890.2| Homo sapiens ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) (RAC1), transcript variant Rac1b, mRNA Length = 2412 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ggccgcggcggcggcggcaggg 27 |||||||||||||||||||||| Sbjct: 226 ggccgcggcggcggcggcaggg 205
>ref|NG_005326.2| Homo sapiens ras-related C3 botulinum toxin substrate 1 pseudogene 2 (RAC1P2) on chromosome 4 Length = 1138 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ggccgcggcggcggcggcaggg 27 |||||||||||||||||||||| Sbjct: 284 ggccgcggcggcggcggcaggg 263
>gb|BC056285.1| Danio rerio zgc:77282, mRNA (cDNA clone IMAGE:6790397), partial cds Length = 1885 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 gcggcggcggcggcaggggacgcttc 35 ||||||||||||||| |||||||||| Sbjct: 589 gcggcggcggcggcatgggacgcttc 614
>ref|XM_844150.1| PREDICTED: Canis familiaris similar to transmembrane protein 28 (LOC607468), mRNA Length = 1449 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 335 ggcggcggcggcggcggcggcagggg 310
>gb|AC090330.22| Homo sapiens chromosome 18, clone RP11-813B21, complete sequence Length = 160530 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggg 28 ||||||||||||||||||||| |||| Sbjct: 53470 ggcggccgcggcggcggcggcggggg 53495
>gb|AC009412.6| Homo sapiens BAC clone RP11-425P5 from 7, complete sequence Length = 212827 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ggccgcggcggcggcggcaggg 27 |||||||||||||||||||||| Sbjct: 146890 ggccgcggcggcggcggcaggg 146869
>ref|XM_382046.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG01870.1) partial mRNA Length = 975 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 370 gtggtggtcgcggtggaagaggtgttgctc 399 ||||||||||||||||| |||||| ||||| Sbjct: 167 gtggtggtcgcggtggacgaggtggtgctc 196
>ref|XM_541626.2| PREDICTED: Canis familiaris similar to leucine rich repeat and fibronectin type III domain containing 1 (LOC484512), mRNA Length = 2313 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 11 cggcggcggcggcaggggacgc 32 |||||||||||||||||||||| Sbjct: 1852 cggcggcggcggcaggggacgc 1831
>gb|DQ165078.1| Homo sapiens ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) (RAC1) gene, complete cds Length = 32886 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ggccgcggcggcggcggcaggg 27 |||||||||||||||||||||| Sbjct: 1617 ggccgcggcggcggcggcaggg 1596
>ref|NM_018557.2| Homo sapiens low density lipoprotein-related protein 1B (deleted in tumors) (LRP1B), mRNA Length = 16557 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 5 cggccgcggcggcggcggcaggggacgctt 34 |||| ||||||||||||||||||| ||||| Sbjct: 916 cggcggcggcggcggcggcaggggccgctt 887
>gb|BC023959.1| Mus musculus cDNA clone IMAGE:5321306, **** WARNING: chimeric clone **** Length = 2353 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 2006 ggcggcggcggcggcggcggcagggg 1981
>gb|AY341855.1| Oryza sativa (japonica cultivar-group) WRKY14 mRNA, complete cds Length = 1947 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2 aggcggccgcggcggcggcggc 23 |||||||||||||||||||||| Sbjct: 1373 aggcggccgcggcggcggcggc 1394
>gb|AY341844.1| Oryza sativa (japonica cultivar-group) WRKY3 mRNA, complete cds Length = 1858 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2 aggcggccgcggcggcggcggc 23 |||||||||||||||||||||| Sbjct: 1329 aggcggccgcggcggcggcggc 1350
>emb|AL354919.16| Human DNA sequence from clone RP11-84A19 on chromosome 1 Contains the 5' end of the BAI2 gene for brain-specific angiogenesis inhibitor 2, the gene for a novel protein (FLJ33697, FLJ25348, FLJ39908, FLJ25348, FLJ38510, FLJ38873), a novel gene (FLJ46627) and three CpG islands, complete sequence Length = 124413 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1 gaggcggccgcggcggcggcggcagg 26 |||||||| ||||||||||||||||| Sbjct: 16561 gaggcggcggcggcggcggcggcagg 16536
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 7 gccgcggcggcggcggcagggg 28 |||||||||||||||||||||| Sbjct: 2082552 gccgcggcggcggcggcagggg 2082573 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 gcggccgcggcggcggcggc 23 |||||||||||||||||||| Sbjct: 2179492 gcggccgcggcggcggcggc 2179511
>emb|Z99757.12|HS349H11 Human DNA sequence from clone LA16c-394H11 on chromosome 16 Contains a novel gene similar to SOX (SRY (sex determining region Y), an STS, GSSs and CpG Islands, complete sequence Length = 32506 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 4866 ggcggcggcggcggcggcggcagggg 4891
>emb|BX649607.1| Aspergillus fumigatus BAC pilot project supercontig; segment 3/3 Length = 227448 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 367 gaggtggtggtcgcggtggaagaggt 392 ||||||||||||||||||| |||||| Sbjct: 148954 gaggtggtggtcgcggtggcagaggt 148929
>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14 Length = 348997 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 293644 ggcggcggcggcggcggcggcagggg 293669
>gb|BC050687.1| Homo sapiens ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1), transcript variant Rac1, mRNA (cDNA clone MGC:60264 IMAGE:6149377), complete cds Length = 2302 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ggccgcggcggcggcggcaggg 27 |||||||||||||||||||||| Sbjct: 173 ggccgcggcggcggcggcaggg 152
>gb|BC004247.1| Homo sapiens ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1), transcript variant Rac1, mRNA (cDNA clone MGC:10547 IMAGE:3610745), complete cds Length = 792 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ggccgcggcggcggcggcaggg 27 |||||||||||||||||||||| Sbjct: 123 ggccgcggcggcggcggcaggg 102
>emb|AL591113.14| Mouse DNA sequence from clone RP23-253E9 on chromosome 11 Contains a phosphoglycerate mutase (Pgam) family pseudogene, a pseudogene similar to part of chondroitin sulfate proteoglycan 6 Cspg6, the gene for a novel protein similar to human DSCAM-interacting protein 1, a novel gene, the Crlf3 gene for cytokine receptor-like factor 3, the 5' end of a novel gene and a CpG island, complete sequence Length = 204106 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggg 28 ||||||||||||||||||||| |||| Sbjct: 100233 ggcggccgcggcggcggcggcggggg 100258
>gb|BC065640.1| Danio rerio zgc:77282, mRNA (cDNA clone MGC:77282 IMAGE:6964865), complete cds Length = 1339 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 gcggcggcggcggcaggggacgcttc 35 ||||||||||||||| |||||||||| Sbjct: 610 gcggcggcggcggcatgggacgcttc 635
>gb|AE006465.1| Homo sapiens 16p13.3 sequence section 4 of 8 Length = 278911 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 196979 ggcggcggcggcggcggcggcagggg 197004
>gb|AC090465.15| Homo sapiens chromosome 18, clone RP11-527C6, complete sequence Length = 174535 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggg 28 ||||||||||||||||||||| |||| Sbjct: 172240 ggcggccgcggcggcggcggcggggg 172265
>emb|CR624356.1| full-length cDNA clone CS0CAP007YD23 of Thymus of Homo sapiens (human) Length = 937 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ggccgcggcggcggcggcaggg 27 |||||||||||||||||||||| Sbjct: 183 ggccgcggcggcggcggcaggg 162
>emb|CR621312.1| full-length cDNA clone CS0DI060YA06 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 845 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ggccgcggcggcggcggcaggg 27 |||||||||||||||||||||| Sbjct: 171 ggccgcggcggcggcggcaggg 150
>emb|CR612844.1| full-length cDNA clone CS0DL005YI17 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 851 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ggccgcggcggcggcggcaggg 27 |||||||||||||||||||||| Sbjct: 193 ggccgcggcggcggcggcaggg 172
>dbj|AK096190.1| Homo sapiens cDNA FLJ38871 fis, clone MESAN2013611, moderately similar to Ciona savignyi mRNA for PEM-3 Length = 3381 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggg 28 ||||||||||||||||||||| |||| Sbjct: 133 ggcggccgcggcggcggcggcggggg 158
>dbj|AK054993.1| Homo sapiens cDNA FLJ30431 fis, clone BRACE2008968, highly similar to RAS-RELATED C3 BOTULINUM TOXIN SUBSTRATE 1 Length = 2315 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ggccgcggcggcggcggcaggg 27 |||||||||||||||||||||| Sbjct: 201 ggccgcggcggcggcggcaggg 180
>tpg|BK005019.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) WRKY transcription factor 16 (WRKY16) gene, complete cds Length = 4090 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2 aggcggccgcggcggcggcggc 23 |||||||||||||||||||||| Sbjct: 3678 aggcggccgcggcggcggcggc 3699
>gb|AC116665.1| Papio hamadryas chromosome , clone RP41-119J13, complete sequence Length = 176602 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2 aggcggccgcggcggcggcggc 23 |||||||||||||||||||||| Sbjct: 71247 aggcggccgcggcggcggcggc 71268
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2 aggcggccgcggcggcggcggc 23 |||||||||||||||||||||| Sbjct: 59891 aggcggccgcggcggcggcggc 59912 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 133819 ggcggccgcggcggcggcggc 133799
>gb|AC108931.4| Homo sapiens BAC clone RP11-284E20 from 4, complete sequence Length = 114175 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 6 ggccgcggcggcggcggcaggg 27 |||||||||||||||||||||| Sbjct: 7986 ggccgcggcggcggcggcaggg 8007
>gb|AC104447.2| Homo sapiens chromosome 3 clone RP11-447D11, complete sequence Length = 202544 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 11079 ggcggcggcggcggcggcggcagggg 11104
>ref|NM_016626.2| Homo sapiens ring finger and KH domain containing 2 (RKHD2), mRNA Length = 3493 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggg 28 ||||||||||||||||||||| |||| Sbjct: 223 ggcggccgcggcggcggcggcggggg 248
>dbj|AK156602.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830032D24 product:Ras interacting protein 1, full insert sequence Length = 3166 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 270 ggcggcggcggcggcggcggcagggg 245
>gb|AC068629.35| Homo sapiens 12 BAC RP11-162A11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191117 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1 gaggcggccgcggcggcggcggcagg 26 |||||||| ||||||||||||||||| Sbjct: 171404 gaggcggcggcggcggcggcggcagg 171379
>gb|AE016818.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome V, complete sequence Length = 1519138 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 181 agaacaagacccagatcggcaaagtcgacgagat 214 ||||||||||| || |||||||||| |||||||| Sbjct: 444829 agaacaagaccgaggtcggcaaagtggacgagat 444862
>emb|AL110816.1|CNS018UH Botrytis cinerea strain T4 cDNA library Length = 720 Score = 44.1 bits (22), Expect = 0.41 Identities = 40/46 (86%) Strand = Plus / Plus Query: 181 agaacaagacccagatcggcaaagtcgacgagatcttcggccccat 226 ||||||||||| ||||| |||||||||||||| |||||||||| Sbjct: 178 agaacaagacctcaatcgggaaagtcgacgagattctcggccccat 223
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1 gaggcggccgcggcggcggcggcagg 26 |||||||| ||||||||||||||||| Sbjct: 22255634 gaggcggcagcggcggcggcggcagg 22255659 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 cggccgcggcggcggcggcagggg 28 ||||||||||||||||||| |||| Sbjct: 18656984 cggccgcggcggcggcggcggggg 18657007 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagg 26 |||||| ||||||||||||||||| Sbjct: 18332935 ggcggcggcggcggcggcggcagg 18332912 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcgg 22 |||||||||||||||||||| Sbjct: 18044177 ggcggccgcggcggcggcgg 18044158 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gcggccgcggcggcggcggc 23 |||||||||||||||||||| Sbjct: 17889130 gcggccgcggcggcggcggc 17889111 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gcggccgcggcggcggcggc 23 |||||||||||||||||||| Sbjct: 2175699 gcggccgcggcggcggcggc 2175680
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 16579068 ggcggcggcggcggcggcggcagggg 16579093 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 4 gcggccgcggcggcggcggcagggg 28 ||||| ||||||||||||||||||| Sbjct: 21495219 gcggcggcggcggcggcggcagggg 21495195 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 gaggcggccgcggcggcggcg 21 ||||||||||||||||||||| Sbjct: 20888673 gaggcggccgcggcggcggcg 20888653 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcaggg 27 |||||| |||||||||||||||||| Sbjct: 9609491 ggcggcggcggcggcggcggcaggg 9609467 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 1 gaggcggccgcggcggcggcggcagggg 28 |||||||| |||||||||||||| |||| Sbjct: 20727652 gaggcggcggcggcggcggcggcggggg 20727679 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 4 gcggccgcggcggcggcggcaggg 27 ||||| |||||||||||||||||| Sbjct: 19758995 gcggcggcggcggcggcggcaggg 19758972 Score = 40.1 bits (20), Expect = 6.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 10 gcggcggcggcggcaggggacgcttcgg 37 |||||||||||||| ||||||||||||| Sbjct: 13086292 gcggcggcggcggc-ggggacgcttcgg 13086266 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcgg 22 |||||||||||||||||||| Sbjct: 11889168 ggcggccgcggcggcggcgg 11889187
>gb|AC009041.10| Homo sapiens chromosome 16 clone RP11-161M6, complete sequence Length = 162342 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 52135 ggcggcggcggcggcggcggcagggg 52160
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 4 gcggccgcggcggcggcggcag 25 |||||||||||||||||||||| Sbjct: 27116050 gcggccgcggcggcggcggcag 27116071 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 23797536 ggcggccgcggcggcggcggc 23797516 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 5567998 ggcggccgcggcggcggcggc 5568018 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 aggcggccgcggcggcggcggcagg 26 ||||||||||||||| ||||||||| Sbjct: 4495765 aggcggccgcggcggtggcggcagg 4495789 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagg 26 |||||| ||||||||||||||||| Sbjct: 26855120 ggcggcggcggcggcggcggcagg 26855097 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcgg 22 |||||||||||||||||||| Sbjct: 5060099 ggcggccgcggcggcggcgg 5060080
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaggcggccgcggcggcggcgg 22 |||||||||||||||||||||| Sbjct: 21088309 gaggcggccgcggcggcggcgg 21088330 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 5238415 ggcggcggcggcggcggcggcagggg 5238390 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 2613465 ggcggcggcggcggcggcggcagggg 2613490 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 2576447 ggcggcggcggcggcggcggcagggg 2576472 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 4 gcggccgcggcggcggcggcag 25 |||||||||||||||||||||| Sbjct: 1752993 gcggccgcggcggcggcggcag 1752972 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 aggcggccgcggcggcggcggcagg 26 ||||||| ||||||||||||||||| Sbjct: 19206182 aggcggcggcggcggcggcggcagg 19206158 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 7 gccgcggcggcggcggcaggggacg 31 |||||||||||||||| |||||||| Sbjct: 10852867 gccgcggcggcggcggaaggggacg 10852891 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 gaggcggccgcggcggcggcg 21 ||||||||||||||||||||| Sbjct: 5379694 gaggcggccgcggcggcggcg 5379674 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 2331761 ggcggccgcggcggcggcggc 2331741 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcgg 22 |||||||||||||||||||| Sbjct: 35071485 ggcggccgcggcggcggcgg 35071504 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 2 aggcggccgcggcggcggcggcagggga 29 |||||| ||||||||||||||| ||||| Sbjct: 22254612 aggcggacgcggcggcggcggcggggga 22254585 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gcggccgcggcggcggcggc 23 |||||||||||||||||||| Sbjct: 20387865 gcggccgcggcggcggcggc 20387846 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 gcggcggcggcggcagggga 29 |||||||||||||||||||| Sbjct: 7428228 gcggcggcggcggcagggga 7428209 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagg 26 |||||| ||||||||||||||||| Sbjct: 3541853 ggcggcggcggcggcggcggcagg 3541830
>gb|AC127430.4| Homo sapiens chromosome 3 clone CTD-2563A18, complete sequence Length = 181750 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 179175 ggcggcggcggcggcggcggcagggg 179200
>gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003O19 genomic sequence, complete sequence Length = 172427 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1 gaggcggccgcggcggcggcggcagg 26 |||||||| ||||||||||||||||| Sbjct: 72877 gaggcggcagcggcggcggcggcagg 72902
>ref|NM_028544.1| Mus musculus Ras interacting protein 1 (Rasip1), mRNA Length = 3169 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 258 ggcggcggcggcggcggcggcagggg 233
>ref|NM_199196.1| Mus musculus suppressor of zeste 12 homolog (Drosophila) (Suz12), mRNA Length = 4448 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggg 28 ||||||||||||||||||||| |||| Sbjct: 391 ggcggccgcggcggcggcggcggggg 416
>gb|AC018730.8| Homo sapiens BAC clone RP11-13J10 from 2, complete sequence Length = 154728 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 82265 ggcggcggcggcggcggcggcagggg 82240
>gb|AC006927.27| Homo sapiens 12 BAC RP11-444J21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 114701 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 37222 ggcggcggcggcggcggcggcagggg 37197 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 4 gcggccgcggcggcggcggcagggg 28 ||||| ||||||||||||||||||| Sbjct: 37263 gcggcggcggcggcggcggcagggg 37239
>ref|NM_205695.1| Danio rerio zgc:77282 (zgc:77282), mRNA Length = 1339 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 gcggcggcggcggcaggggacgcttc 35 ||||||||||||||| |||||||||| Sbjct: 610 gcggcggcggcggcatgggacgcttc 635
>gb|AC092575.3| Homo sapiens BAC clone RP11-4C18 from 2, complete sequence Length = 120927 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 5 cggccgcggcggcggcggcaggggacgctt 34 |||| ||||||||||||||||||| ||||| Sbjct: 118651 cggcggcggcggcggcggcaggggccgctt 118680
>dbj|AP003052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0016I09 Length = 148517 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaggcggccgcggcggcggcgg 22 |||||||||||||||||||||| Sbjct: 3602 gaggcggccgcggcggcggcgg 3623
>dbj|AP001551.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0451C06 Length = 151773 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaggcggccgcggcggcggcgg 22 |||||||||||||||||||||| Sbjct: 124563 gaggcggccgcggcggcggcgg 124584
>dbj|AP003222.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0003E08 Length = 135014 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2 aggcggccgcggcggcggcggc 23 |||||||||||||||||||||| Sbjct: 98162 aggcggccgcggcggcggcggc 98141
>dbj|AP004997.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0030G11 Length = 143943 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 4 gcggccgcggcggcggcggcag 25 |||||||||||||||||||||| Sbjct: 71005 gcggccgcggcggcggcggcag 70984
>dbj|AP005720.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1123_B08 Length = 134028 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 111293 ggcggcggcggcggcggcggcagggg 111318
>dbj|AP004017.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_F08 Length = 105979 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 1 gaggcggccgcggcggcggcgg 22 |||||||||||||||||||||| Sbjct: 90054 gaggcggccgcggcggcggcgg 90075
>dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0437H03 Length = 170173 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 131868 ggcggcggcggcggcggcggcagggg 131843
>dbj|AP005288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_C03 Length = 103297 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 92248 ggcggcggcggcggcggcggcagggg 92273 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 55230 ggcggcggcggcggcggcggcagggg 55255
>dbj|AP005191.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0479D12 Length = 148362 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 15687 ggcggcggcggcggcggcggcagggg 15712
>dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1521_G02 Length = 117964 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 4 gcggccgcggcggcggcggcag 25 |||||||||||||||||||||| Sbjct: 17083 gcggccgcggcggcggcggcag 17104
>dbj|AP003948.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1211_G06 Length = 96421 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 4 gcggccgcggcggcggcggcag 25 |||||||||||||||||||||| Sbjct: 87137 gcggccgcggcggcggcggcag 87158
>dbj|AK122213.1| Mus musculus mRNA for mKIAA0160 protein Length = 4304 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggg 28 ||||||||||||||||||||| |||| Sbjct: 376 ggcggccgcggcggcggcggcggggg 401
>dbj|AK110320.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-164-C11, full insert sequence Length = 2605 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 679 ggcggcggcggcggcggcggcagggg 654
>dbj|AK103988.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-A08, full insert sequence Length = 1209 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1 gaggcggccgcggcggcggcggcagg 26 |||||||| ||||||||||||||||| Sbjct: 556 gaggcggcagcggcggcggcggcagg 531
>dbj|AK103956.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-A03, full insert sequence Length = 1401 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 613 ggcggcggcggcggcggcggcagggg 588
>dbj|AK100898.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131C20, full insert sequence Length = 2322 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 4 gcggccgcggcggcggcggcag 25 |||||||||||||||||||||| Sbjct: 145 gcggccgcggcggcggcggcag 166
>dbj|AK100775.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023120C08, full insert sequence Length = 2045 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 622 ggcggcggcggcggcggcggcagggg 597
>dbj|AK100310.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078J22, full insert sequence Length = 2467 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 620 ggcggcggcggcggcggcggcagggg 595
>dbj|AK099409.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013003D17, full insert sequence Length = 1230 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1 gaggcggccgcggcggcggcggcagg 26 |||||||| ||||||||||||||||| Sbjct: 575 gaggcggcagcggcggcggcggcagg 550
>dbj|AK073597.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048L23, full insert sequence Length = 1406 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 620 ggcggcggcggcggcggcggcagggg 595
>emb|AJ132695.5|HSA132695 Homo sapiens rac1 gene Length = 28567 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ggccgcggcggcggcggcaggg 27 |||||||||||||||||||||| Sbjct: 1211 ggccgcggcggcggcggcaggg 1190
>dbj|AK072646.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023129P11, full insert sequence Length = 2324 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 4 gcggccgcggcggcggcggcag 25 |||||||||||||||||||||| Sbjct: 145 gcggccgcggcggcggcggcag 166
>dbj|AK072102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114C17, full insert sequence Length = 1230 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1 gaggcggccgcggcggcggcggcagg 26 |||||||| ||||||||||||||||| Sbjct: 575 gaggcggcagcggcggcggcggcagg 550
>ref|NM_210119.1| Eremothecium gossypii AEL096Wp (AEL096W), mRNA Length = 639 Score = 44.1 bits (22), Expect = 0.41 Identities = 31/34 (91%) Strand = Plus / Plus Query: 181 agaacaagacccagatcggcaaagtcgacgagat 214 ||||||||||| || |||||||||| |||||||| Sbjct: 212 agaacaagaccgaggtcggcaaagtggacgagat 245
>dbj|AK067393.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106B07, full insert sequence Length = 2425 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 gaggcggccgcggcggcggcgg 22 |||||||||||||||||||||| Sbjct: 81 gaggcggccgcggcggcggcgg 60
>dbj|AK063555.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-E08, full insert sequence Length = 1597 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 1 gaggcggccgcggcggcggcgg 22 |||||||||||||||||||||| Sbjct: 102 gaggcggccgcggcggcggcgg 81
>gb|AY105012.1| Zea mays PCO097858 mRNA sequence Length = 893 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 215 ggcggcggcggcggcggcggcagggg 240
>gb|U97663.1|CRU97663 Chlamydomonas reinhardtii phosphatidylinositol 3-kinase gene, partial cds Length = 4877 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 4 gcggccgcggcggcggcggcag 25 |||||||||||||||||||||| Sbjct: 4228 gcggccgcggcggcggcggcag 4249
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1 gaggcggccgcggcggcggcggcagg 26 |||||||| ||||||||||||||||| Sbjct: 22267702 gaggcggcagcggcggcggcggcagg 22267727 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 cggccgcggcggcggcggcagggg 28 ||||||||||||||||||| |||| Sbjct: 18667837 cggccgcggcggcggcggcggggg 18667860 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagg 26 |||||| ||||||||||||||||| Sbjct: 18342588 ggcggcggcggcggcggcggcagg 18342565 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcgg 22 |||||||||||||||||||| Sbjct: 18053430 ggcggccgcggcggcggcgg 18053411 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gcggccgcggcggcggcggc 23 |||||||||||||||||||| Sbjct: 17898383 gcggccgcggcggcggcggc 17898364 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gcggccgcggcggcggcggc 23 |||||||||||||||||||| Sbjct: 2175650 gcggccgcggcggcggcggc 2175631
>gb|AC167242.4| Mus musculus BAC clone RP24-354I16 from chromosome 7, complete sequence Length = 202422 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 29136 ggcggcggcggcggcggcggcagggg 29111
>gb|AY870604.1| Oryza sativa (japonica cultivar-group) WRKY16 mRNA, complete cds Length = 1840 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 2 aggcggccgcggcggcggcggc 23 |||||||||||||||||||||| Sbjct: 1353 aggcggccgcggcggcggcggc 1374
>gb|BC107748.1| Homo sapiens ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1), transcript variant Rac1, mRNA (cDNA clone MGC:111543 IMAGE:6699945), complete cds Length = 868 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ggccgcggcggcggcggcaggg 27 |||||||||||||||||||||| Sbjct: 188 ggccgcggcggcggcggcaggg 167
>dbj|AB209410.1| Homo sapiens mRNA for ras-related C3 botulinum toxin substrate 1 isoform Rac1b variant protein Length = 5408 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 6 ggccgcggcggcggcggcaggg 27 |||||||||||||||||||||| Sbjct: 173 ggccgcggcggcggcggcaggg 152
>emb|X52501.1|SSVNTR35 S.scrofa VNTR DNA (clone pHTF35) Length = 253 Score = 44.1 bits (22), Expect = 0.41 Identities = 34/38 (89%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcaggggacgcttcggtgg 40 |||||| |||||||||||||| |||| |||| |||||| Sbjct: 16 ggcggcggcggcggcggcggcggggggcgctgcggtgg 53
>emb|AL806517.9| Mouse DNA sequence from clone RP23-20K17 on chromosome 4, complete sequence Length = 192432 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 41121 ggcggcggcggcggcggcggcagggg 41096
>dbj|AB001835.1| Homo sapiens DNA for Brain-1, complete cds Length = 1679 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcagggg 28 |||||| ||||||||||||||||||| Sbjct: 1657 ggcggcggcggcggcggcggcagggg 1632
>gb|AY308818.1| Canis familiaris homeobox D13 gene, partial sequence Length = 706 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 187 ggcggccgcggcggcggcggc 207
>gb|AY308817.1| Canis familiaris homeobox D11 gene, partial sequence Length = 494 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 108 ggcggccgcggcggcggcggc 88
>ref|XM_641279.1| Dictyostelium discoideum hypothetical protein (DDB0190639), partial mRNA Length = 1005 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 366 agaggtggtggtcgcggtggaagaggtgttgctcgtggtgg 406 |||||||||| || ||||| ||||||| |||||||||||| Sbjct: 214 agaggtggtgcccgtggtggtagaggtggtgctcgtggtgg 254
>ref|XM_525278.1| PREDICTED: Pan troglodytes similar to thyroid transcription factor-1 (LOC469893), mRNA Length = 1488 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 423 ggcggccgcggcggcggcggc 443
>ref|XM_482997.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1412 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 597 ggcggccgcggcggcggcggc 617
>ref|XM_507271.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBb0092C08.26 mRNA Length = 1916 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 594 ggcggccgcggcggcggcggc 614
>ref|XM_480521.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1041 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 43 ggcggccgcggcggcggcggc 23
>ref|XM_480345.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1750 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 2 aggcggccgcggcggcggcggcagg 26 ||||||||||||||| ||||||||| Sbjct: 134 aggcggccgcggcggtggcggcagg 110
>ref|XM_508792.1| PREDICTED: Pan troglodytes similar to ALL-1 protein (LOC451587), mRNA Length = 12960 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 984 ggcggccgcggcggcggcggc 1004
>ref|XM_466033.1| Oryza sativa (japonica cultivar-group), mRNA Length = 753 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 2 aggcggccgcggcggcggcggcagg 26 ||||||| ||||||||||||||||| Sbjct: 293 aggcggcggcggcggcggcggcagg 317
>ref|XM_464999.1| Oryza sativa (japonica cultivar-group), mRNA Length = 357 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 7 gccgcggcggcggcggcaggggacg 31 |||||||||||||||| |||||||| Sbjct: 283 gccgcggcggcggcggaaggggacg 307
>ref|NM_001002973.1| Canis familiaris basic helix-loop-helix domain containing, class B, 3 (BHLHB3), mRNA Length = 3455 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 1555 ggcggccgcggcggcggcggc 1535
>ref|NM_001005249.1| Canis familiaris T-box 2 (TBX2), mRNA Length = 2302 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 228 ggcggccgcggcggcggcggc 248
>ref|XM_464466.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2270 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 gaggcggccgcggcggcggcg 21 ||||||||||||||||||||| Sbjct: 236 gaggcggccgcggcggcggcg 256
>ref|XM_450551.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1140 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcaggg 27 |||||| |||||||||||||||||| Sbjct: 571 ggcggcggcggcggcggcggcaggg 595
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 gagggggacgcggtaacgaag 134 ||||||||||||||||||||| Sbjct: 2165657 gagggggacgcggtaacgaag 2165637
>ref|XM_463630.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2361 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 48 ggcggccgcggcggcggcggc 68
>ref|NM_005994.3| Homo sapiens T-box 2 (TBX2), mRNA Length = 3396 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 461 ggcggccgcggcggcggcggc 481
>ref|XM_516408.1| PREDICTED: Pan troglodytes similar to brain specific binding protein; BINP receptor (LOC460316), mRNA Length = 3103 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 cggccgcggcggcggcggcag 25 ||||||||||||||||||||| Sbjct: 2438 cggccgcggcggcggcggcag 2418
>ref|NM_193424.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 624 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcaggg 27 |||||| |||||||||||||||||| Sbjct: 501 ggcggcggcggcggcggcggcaggg 477
>ref|NM_189357.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1632 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 7 gccgcggcggcggcggcaggg 27 ||||||||||||||||||||| Sbjct: 423 gccgcggcggcggcggcaggg 443
>gb|AC161192.12| Mus musculus chromosome 5, clone RP23-382I10, complete sequence Length = 214985 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 202347 ggcggccgcggcggcggcggc 202367
>ref|NM_022384.1| Rattus norvegicus achaete-scute complex homolog-like 1 (Drosophila) (Ascl1), mRNA Length = 1656 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 836 ggcggccgcggcggcggcggc 856
>ref|XM_473403.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 957 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 378 ggcggccgcggcggcggcggc 398
>ref|XM_472059.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2397 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 219 ggcggccgcggcggcggcggc 199
>gb|BT018267.1| Zea mays clone EL01T0202H05.c mRNA sequence Length = 1055 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1 gaggcggccgcggcggcggcggcagggga 29 |||||||| |||||||||||||| ||||| Sbjct: 545 gaggcggcggcggcggcggcggccgggga 573
>gb|BC083075.1| Mus musculus CDK2 (cyclin-dependent kinase 2)-associated protein 1, mRNA (cDNA clone MGC:102310 IMAGE:6440764), complete cds Length = 1261 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcaggg 27 |||||| |||||||||||||||||| Sbjct: 47 ggcggcggcggcggcggcggcaggg 71
>gb|AF064842.1| Homo sapiens map 2q30-p32; 202.6 cR from top repeat region, complete sequence Length = 3069 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 857 ggcggccgcggcggcggcggc 877
>gb|BC101651.1| Homo sapiens cadherin 4, type 1, R-cadherin (retinal), mRNA (cDNA clone MGC:126700 IMAGE:8069157), complete cds Length = 2911 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcaggg 27 |||||| |||||||||||||||||| Sbjct: 22 ggcggcggcggcggcggcggcaggg 46
>gb|AY731552.1| Arachis hypogaea clone PM737 microsatellite sequence Length = 401 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 320 ggcggccgcggcggcggcggc 340
>gb|AC138641.10| Mus musculus chromosome 5, clone RP23-466K15, complete sequence Length = 175628 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 101741 ggcggccgcggcggcggcggc 101721
>ref|XM_614245.2| PREDICTED: Bos taurus similar to ladybird homeobox homolog 1 (LOC534470), mRNA Length = 2409 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcaggg 27 |||||| |||||||||||||||||| Sbjct: 1936 ggcggcggcggcggcggcggcaggg 1960
>ref|XM_362879.1| Magnaporthe grisea 70-15 hypothetical protein (MG08558.4) partial cds Length = 1329 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 gaggcggccgcggcggcggcggcag 25 |||||||| |||||||||||||||| Sbjct: 461 gaggcggcggcggcggcggcggcag 437
>gb|AY609318.1| Zea mays multidrug-resistance associated protein 3 (MRP3) gene, complete cds Length = 7315 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcaggg 27 |||||| |||||||||||||||||| Sbjct: 913 ggcggcggcggcggcggcggcaggg 889
>ref|NM_008242.1| Mus musculus forkhead box D1 (Foxd1), mRNA Length = 2437 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 1 gaggcggccgcggcggcggcg 21 ||||||||||||||||||||| Sbjct: 1642 gaggcggccgcggcggcggcg 1622 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcgg 22 |||||||||||||||||||| Sbjct: 483 ggcggccgcggcggcggcgg 502
>gb|BC064654.1| Rattus norvegicus 3-hydroxy-3-methylglutaryl-Coenzyme A reductase, mRNA (cDNA clone MGC:72532 IMAGE:5600023), complete cds Length = 4319 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1 gaggcggccgcggcggcggcggcagggga 29 |||||||| ||||||||||||||| |||| Sbjct: 4005 gaggcggcggcggcggcggcggcacggga 4033
>gb|BC052566.1| Homo sapiens T-box 2, mRNA (cDNA clone MGC:59687 IMAGE:6339405), complete cds Length = 3059 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 461 ggcggccgcggcggcggcggc 481
>gb|BC000274.1| Homo sapiens single stranded DNA binding protein 4, mRNA (cDNA clone MGC:3181 IMAGE:3356283), complete cds Length = 1724 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 cggccgcggcggcggcggcag 25 ||||||||||||||||||||| Sbjct: 68 cggccgcggcggcggcggcag 48
>ref|NM_001003658.2| Bos taurus EIF5A protein (EIF5A), mRNA Length = 1273 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 gaggcggccgcggcggcggcggcag 25 |||||||| |||||||||||||||| Sbjct: 16 gaggcggcggcggcggcggcggcag 40
>ref|NM_007566.1| Mus musculus baculoviral IAP repeat-containing 6 (Birc6), mRNA Length = 15475 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 8 ccgcggcggcggcggcagggg 28 ||||||||||||||||||||| Sbjct: 302 ccgcggcggcggcggcagggg 322
>gb|AC124602.5| Mus musculus BAC clone RP23-37L7 from chromosome 7, complete sequence Length = 189065 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 gaggcggccgcggcggcggcggcag 25 |||||||| |||||||||||||||| Sbjct: 22999 gaggcggcggcggcggcggcggcag 22975
>gb|AC127339.3| Mus musculus BAC clone RP23-180G16 from chromosome 5, complete sequence Length = 225376 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggcaggg 27 |||||| |||||||||||||||||| Sbjct: 97041 ggcggcggcggcggcggcggcaggg 97017
>gb|AC135962.4| Mus musculus BAC clone RP23-342H15 from chromosome 16, complete sequence Length = 202525 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 gaggcggccgcggcggcggcggcag 25 |||||||| |||||||||||||||| Sbjct: 32300 gaggcggcggcggcggcggcggcag 32276
>ref|NM_173430.2| Mus musculus fukutin related protein (Fkrp), mRNA Length = 2817 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcaggg 27 |||||| |||||||||||||||||| Sbjct: 14 ggcggcggcggcggcggcggcaggg 38
>ref|NM_013812.2| Mus musculus CDK2 (cyclin-dependent kinase 2)-associated protein 1 (Cdk2ap1), mRNA Length = 1283 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcaggg 27 |||||| |||||||||||||||||| Sbjct: 50 ggcggcggcggcggcggcggcaggg 74
>ref|NM_178689.2| Mus musculus RIKEN cDNA 6430537H07 gene (6430537H07Rik), mRNA Length = 2563 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 gaggcggccgcggcggcggcggcag 25 |||||||| |||||||||||||||| Sbjct: 639 gaggcggcggcggcggcggcggcag 615
>gb|AC154442.3| Mus musculus BAC clone RP24-178L2 from chromosome 17, complete sequence Length = 177231 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 ccgcggcggcggcggcagggg 28 ||||||||||||||||||||| Sbjct: 50696 ccgcggcggcggcggcagggg 50676
>ref|NM_001009998.1| Homo sapiens single stranded DNA binding protein 4 (SSBP4), transcript variant 2, mRNA Length = 1818 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 cggccgcggcggcggcggcag 25 ||||||||||||||||||||| Sbjct: 171 cggccgcggcggcggcggcag 151
>ref|NM_032627.2| Homo sapiens single stranded DNA binding protein 4 (SSBP4), transcript variant 1, mRNA Length = 1884 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 5 cggccgcggcggcggcggcag 25 ||||||||||||||||||||| Sbjct: 171 cggccgcggcggcggcggcag 151
>gb|AY340972.1| Oryctolagus cuniculus forkhead transcription factor L2 (FoxL2) gene, complete cds Length = 1155 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 669 ggcggccgcggcggcggcggc 689
>gb|AY077730.1| Podospora anserina Bck1-like MAP kinase kinase kinase (ask1) gene, complete cds Length = 6016 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcaggg 27 |||||| |||||||||||||||||| Sbjct: 1648 ggcggcggcggcggcggcggcaggg 1672
>gb|BC065149.1| Mus musculus CXXC finger 4, mRNA (cDNA clone IMAGE:6853043), partial cds Length = 5216 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 598 ggcggccgcggcggcggcggc 578 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcagg 26 |||||| ||||||||||||||||| Sbjct: 686 ggcggcggcggcggcggcggcagg 709
>gb|AC120887.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0088K21, complete sequence Length = 153239 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 111600 ggcggccgcggcggcggcggc 111580
>ref|XM_847841.1| PREDICTED: Canis familiaris similar to SRY (sex determining region Y)-box 3, transcript variant 2 (LOC492178), mRNA Length = 1375 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 1032 ggcggccgcggcggcggcggc 1012 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 720 ggcggccgcggcggcggcggc 700 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcgg 22 |||||||||||||||||||| Sbjct: 1074 ggcggccgcggcggcggcgg 1055
>ref|XM_549298.2| PREDICTED: Canis familiaris similar to SRY (sex determining region Y)-box 3, transcript variant 1 (LOC492178), mRNA Length = 1105 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 762 ggcggccgcggcggcggcggc 742 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 450 ggcggccgcggcggcggcggc 430 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcgg 22 |||||||||||||||||||| Sbjct: 804 ggcggccgcggcggcggcgg 785
>ref|XM_861448.1| PREDICTED: Canis familiaris similar to SRY (sex determining region Y)-box 3, transcript variant 4 (LOC492178), mRNA Length = 1023 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 495 ggcggccgcggcggcggcggc 475
>ref|XM_861433.1| PREDICTED: Canis familiaris similar to SRY (sex determining region Y)-box 3, transcript variant 3 (LOC492178), mRNA Length = 1075 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 495 ggcggccgcggcggcggcggc 475 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcgg 22 |||||||||||||||||||| Sbjct: 774 ggcggccgcggcggcggcgg 755
>gb|AY526442.1| Arachis hypogaea clone PM686 microsatellite sequence Length = 433 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 cgcggcggcggcggcagggga 29 ||||||||||||||||||||| Sbjct: 201 cgcggcggcggcggcagggga 181
>gb|AY526389.1| Arachis hypogaea clone PM633 microsatellite sequence Length = 450 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 9 cgcggcggcggcggcagggga 29 ||||||||||||||||||||| Sbjct: 189 cgcggcggcggcggcagggga 169
>gb|AY526379.1| Arachis hypogaea clone PM623 microsatellite sequence Length = 260 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 194 ggcggccgcggcggcggcggc 214
>gb|AY526378.1| Arachis hypogaea clone PM622 microsatellite sequence Length = 400 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 233 ggcggccgcggcggcggcggc 253
>ref|XM_847336.1| PREDICTED: Canis familiaris similar to Homeobox protein Hox-D11 (Hox-4F) (LOC609973), mRNA Length = 1456 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 324 ggcggccgcggcggcggcggc 344
>gb|BC023285.1| Mus musculus RIKEN cDNA 6430537H07 gene, mRNA (cDNA clone MGC:30738 IMAGE:3984456), complete cds Length = 1997 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 gaggcggccgcggcggcggcggcag 25 |||||||| |||||||||||||||| Sbjct: 79 gaggcggcggcggcggcggcggcag 55
>gb|BC066122.1| Homo sapiens breakpoint cluster region, mRNA (cDNA clone MGC:71633 IMAGE:30341883), complete cds Length = 4686 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 gaggcggccgcggcggcggcggcag 25 |||||||| |||||||||||||||| Sbjct: 32 gaggcggcggcggcggcggcggcag 56
>ref|XM_985966.1| PREDICTED: Mus musculus SET domain containing 1A (Setd1a), mRNA Length = 5862 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 gaggcggccgcggcggcggcggcag 25 |||||||| |||||||||||||||| Sbjct: 69 gaggcggcggcggcggcggcggcag 45
>ref|XM_894035.2| PREDICTED: Mus musculus SET domain containing 1A (Setd1a), mRNA Length = 5934 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 gaggcggccgcggcggcggcggcag 25 |||||||| |||||||||||||||| Sbjct: 69 gaggcggcggcggcggcggcggcag 45
>ref|XM_001002952.1| PREDICTED: Mus musculus hypothetical protein LOC668663 (LOC668663), mRNA Length = 723 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 gaggcggccgcggcggcggcggcag 25 |||||||| |||||||||||||||| Sbjct: 487 gaggcggcggcggcggcggcggcag 511
>gb|AC120886.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0068E24, complete sequence Length = 141492 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 4390 ggcggccgcggcggcggcggc 4370
>ref|XM_543882.2| PREDICTED: Canis familiaris similar to F-box/LRR-repeat protein 14 (F-box and leucine-rich repeat protein 14) (LOC486755), mRNA Length = 1359 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 gaggcggccgcggcggcggcggcag 25 |||||||| |||||||||||||||| Sbjct: 21 gaggcggcggcggcggcggcggcag 45
>ref|XM_994637.1| PREDICTED: Mus musculus homeo box D8 (Hoxd8), mRNA Length = 1991 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 45 ggcggccgcggcggcggcggc 65
>ref|XM_355338.4| PREDICTED: Mus musculus homeo box D8 (Hoxd8), mRNA Length = 1991 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 45 ggcggccgcggcggcggcggc 65
>ref|XM_912169.2| PREDICTED: Mus musculus homeo box D8 (Hoxd8), mRNA Length = 1991 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 45 ggcggccgcggcggcggcggc 65
>ref|XM_849303.1| PREDICTED: Canis familiaris hypothetical protein LOC611616 (LOC611616), mRNA Length = 2289 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 518 ggcggccgcggcggcggcggc 498
>gb|AY316746.1| Rhizobium sp. NGR234 megaplasmid 2 contig 2, complete sequence Length = 236455 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 gcggcggcggcggcaggggac 30 ||||||||||||||||||||| Sbjct: 44943 gcggcggcggcggcaggggac 44963
>ref|XM_747699.1| Aspergillus fumigatus Af293 fibrillarin (Afu1g14220) partial mRNA Length = 939 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 367 gaggtggtggtcgcggtggaagagg 391 ||||||||||||||||||| ||||| Sbjct: 68 gaggtggtggtcgcggtggcagagg 92
>gb|BC029216.1| Mus musculus fukutin related protein, mRNA (cDNA clone IMAGE:3675022), containing frame-shift errors Length = 784 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 3 ggcggccgcggcggcggcggcaggg 27 |||||| |||||||||||||||||| Sbjct: 9 ggcggcggcggcggcggcggcaggg 33
>ref|XM_845645.1| PREDICTED: Canis familiaris similar to eomesodermin, transcript variant 2 (LOC485636), mRNA Length = 2184 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 378 ggcggccgcggcggcggcggc 358
>ref|XM_542755.2| PREDICTED: Canis familiaris similar to eomesodermin, transcript variant 1 (LOC485636), mRNA Length = 2818 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 390 ggcggccgcggcggcggcggc 370
>ref|XM_748355.1| Aspergillus fumigatus Af293 hypothetical protein (Afu5g12030) partial mRNA Length = 396 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 gaggcggccgcggcggcggcggcag 25 |||||||| |||||||||||||||| Sbjct: 167 gaggcggcggcggcggcggcggcag 191
>ref|XM_844161.1| PREDICTED: Canis familiaris similar to Small conductance calcium-activated potassium channel protein 2 (SK2), transcript variant 2 (LOC474640), mRNA Length = 2708 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 gaggcggccgcggcggcggcggcag 25 |||||||| |||||||||||||||| Sbjct: 920 gaggcggcggcggcggcggcggcag 944
>ref|XM_853173.1| PREDICTED: Canis familiaris similar to Small conductance calcium-activated potassium channel protein 2 (SK2), transcript variant 7 (LOC474640), mRNA Length = 2031 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 gaggcggccgcggcggcggcggcag 25 |||||||| |||||||||||||||| Sbjct: 243 gaggcggcggcggcggcggcggcag 267
>ref|XM_853129.1| PREDICTED: Canis familiaris similar to Small conductance calcium-activated potassium channel protein 2 (SK2), transcript variant 6 (LOC474640), mRNA Length = 1986 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 gaggcggccgcggcggcggcggcag 25 |||||||| |||||||||||||||| Sbjct: 216 gaggcggcggcggcggcggcggcag 240
>ref|XM_853050.1| PREDICTED: Canis familiaris similar to Small conductance calcium-activated potassium channel protein 2 (SK2), transcript variant 5 (LOC474640), mRNA Length = 1363 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 gaggcggccgcggcggcggcggcag 25 |||||||| |||||||||||||||| Sbjct: 243 gaggcggcggcggcggcggcggcag 267
>ref|XM_853011.1| PREDICTED: Canis familiaris similar to Small conductance calcium-activated potassium channel protein 2 (SK2), transcript variant 4 (LOC474640), mRNA Length = 1360 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 gaggcggccgcggcggcggcggcag 25 |||||||| |||||||||||||||| Sbjct: 216 gaggcggcggcggcggcggcggcag 240
>ref|XM_852967.1| PREDICTED: Canis familiaris similar to Small conductance calcium-activated potassium channel protein 2 (SK2), transcript variant 3 (LOC474640), mRNA Length = 777 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 1 gaggcggccgcggcggcggcggcag 25 |||||||| |||||||||||||||| Sbjct: 216 gaggcggcggcggcggcggcggcag 240
>gb|AC124681.3| Mus musculus BAC clone RP24-261H7 from chromosome 16, complete sequence Length = 173837 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 gaggcggccgcggcggcggcggcag 25 |||||||| |||||||||||||||| Sbjct: 159420 gaggcggcggcggcggcggcggcag 159396
>ref|NM_012689.1| Rattus norvegicus estrogen receptor 1 (Esr1), mRNA Length = 2090 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 ggcggccgcggcggcggcggc 23 ||||||||||||||||||||| Sbjct: 422 ggcggccgcggcggcggcggc 402 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,633,758 Number of Sequences: 3902068 Number of extensions: 3633758 Number of successful extensions: 271250 Number of sequences better than 10.0: 825 Number of HSP's better than 10.0 without gapping: 880 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 228621 Number of HSP's gapped (non-prelim): 36976 length of query: 474 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 452 effective length of database: 17,147,199,772 effective search space: 7750534296944 effective search space used: 7750534296944 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
