ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast74d04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ALDH_LINUS (Q40255) Probable aldehyde dehydrogenase (EC 1.2.1.3)... 70 1e-12
2NAS32_CAEEL (O16977) Zinc metalloproteinase nas-32 precursor (EC... 32 0.50
3PME_BRANA (P41510) Probable pectinesterase precursor (EC 3.1.1.1... 28 4.2
4RBX1B_DROME (Q9NHX0) RING-box protein 1B (Regulator of cullins 1b) 28 4.2
5PME_BRACM (Q42608) Pectinesterase (EC 3.1.1.11) (Pectin methyles... 28 4.2
6AMPN2_LACLA (Q48656) Aminopeptidase N (EC 3.4.11.2) (Lysyl amino... 28 5.5
7TIBA_ECOLI (Q9XD84) Adhesin/invasin tibA precursor (Glycoprotein... 28 7.2
8PMEL_ARATH (Q5MFV6) Probable pectinesterase VGDH2 precursor (EC ... 27 9.4
9DIAP1_MOUSE (O08808) Protein diaphanous homolog 1 (Diaphanous-re... 27 9.4
10CBF2_CAMJE (Q46105) Cell-binding factor 2 precursor (Major antig... 27 9.4
11BGL1_BACSU (P40740) Beta-glucosidase (EC 3.2.1.21) (Gentiobiase)... 27 9.4

>ALDH_LINUS (Q40255) Probable aldehyde dehydrogenase (EC 1.2.1.3)|
           (Flax-inducible sequence 1)
          Length = 551

 Score = 70.1 bits (170), Expect = 1e-12
 Identities = 33/58 (56%), Positives = 41/58 (70%)
 Frame = +1

Query: 181 HTPAFATVSPEEISGSSPAEVQNFVQGKWIKPANWNWIVDPLNGEXFIXVGEVQGSEI 354
           H+  FATV  EE+SG+ PAEV N VQG W   ++W+ +VDPLNGE FI V EV  +EI
Sbjct: 29  HSLPFATVDAEELSGAKPAEVLNLVQGNWGGSSSWHTVVDPLNGEPFIKVAEVDETEI 86



to top

>NAS32_CAEEL (O16977) Zinc metalloproteinase nas-32 precursor (EC 3.4.24.21)|
           (Nematode astacin 32)
          Length = 651

 Score = 31.6 bits (70), Expect = 0.50
 Identities = 14/41 (34%), Positives = 21/41 (51%)
 Frame = -1

Query: 302 GSTIQFQLAGFIHFPCTKFCTSAGLEPEISSGDTVANAGVC 180
           G  IQF++    +  C   CT  G+EP++ S  T+  A  C
Sbjct: 476 GKQIQFRIDSTYNTQCVYGCTFNGVEPKLKSDMTITQARYC 516



to top

>PME_BRANA (P41510) Probable pectinesterase precursor (EC 3.1.1.11) (Pectin|
           methylesterase) (PE)
          Length = 584

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 229 SPAEVQNFVQGKWIKPANW 285
           S AEV+ F    W+ PANW
Sbjct: 554 SAAEVERFTVANWLTPANW 572



to top

>RBX1B_DROME (Q9NHX0) RING-box protein 1B (Regulator of cullins 1b)|
          Length = 122

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 13/39 (33%), Positives = 16/39 (41%)
 Frame = +1

Query: 181 HTPAFATVSPEEISGSSPAEVQNFVQGKWIKPANWNWIV 297
           H   F    P    G+  A  + FV  KW+  A W W V
Sbjct: 14  HDMDFNDEEPSCSGGAVQARTERFVVKKWVAHAMWGWDV 52



to top

>PME_BRACM (Q42608) Pectinesterase (EC 3.1.1.11) (Pectin methylesterase) (PE)|
           (Fragment)
          Length = 571

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 229 SPAEVQNFVQGKWIKPANW 285
           S AEV+ F    W+ PANW
Sbjct: 541 SAAEVERFTVANWLTPANW 559



to top

>AMPN2_LACLA (Q48656) Aminopeptidase N (EC 3.4.11.2) (Lysyl aminopeptidase)|
           (Lys-AP) (Alanine aminopeptidase)
          Length = 848

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 9/56 (16%)
 Frame = +1

Query: 175 WLHTPAFATVSPEEISGSSPAEVQNFVQGK-------WIKP--ANWNWIVDPLNGE 315
           WL  P +  VS E +  +     + F  G+       W  P   NWN + D L+GE
Sbjct: 440 WLEQPGYPVVSAEVVDDTLILSQKQFFIGEHEDKGRLWEIPLNTNWNGLPDTLSGE 495



to top

>TIBA_ECOLI (Q9XD84) Adhesin/invasin tibA precursor (Glycoprotein tibA)|
          Length = 989

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -3

Query: 87  ARAGSISPGSTGRGGSAVWFDSDG 16
           AR G  +  S+G G  A WFD+DG
Sbjct: 785 ARGGKSNVDSSGGGLYATWFDNDG 808



to top

>PMEL_ARATH (Q5MFV6) Probable pectinesterase VGDH2 precursor (EC 3.1.1.11)|
           (Pectin methylesterase) (PE) (VANGUARD1-like protein 2)
           (VGD1-like protein 2)
          Length = 588

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 229 SPAEVQNFVQGKWIKPANW 285
           S AEV+ +    W+ PANW
Sbjct: 558 SAAEVETYTVANWVGPANW 576



to top

>DIAP1_MOUSE (O08808) Protein diaphanous homolog 1 (Diaphanous-related formin-1)|
           (DRF1) (mDIA1) (p140mDIA)
          Length = 1255

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 11  VTPSESNHTALPPRPVLPGE 70
           V PS S+  A+PP P LPG+
Sbjct: 561 VAPSVSSSAAVPPAPPLPGD 580



to top

>CBF2_CAMJE (Q46105) Cell-binding factor 2 precursor (Major antigen peb4A)|
          Length = 273

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/21 (52%), Positives = 13/21 (61%)
 Frame = -3

Query: 87  ARAGSISPGSTGRGGSAVWFD 25
           A+  SI PGS  +GG   WFD
Sbjct: 170 AKEKSIDPGSKNQGGELGWFD 190



to top

>BGL1_BACSU (P40740) Beta-glucosidase (EC 3.2.1.21) (Gentiobiase) (Cellobiase)|
           (Beta-D-glucoside glucohydrolase) (Amygdalase)
          Length = 469

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +1

Query: 196 ATVSPEEISGSSPAEVQNFVQGKWIKPANWNWIVDP 303
           A+  PEE++ S    +   V+  ++K + W W +DP
Sbjct: 312 ASTDPEELAKSG-GNLLGGVKNPYLKSSEWGWQIDP 346


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,876,262
Number of Sequences: 219361
Number of extensions: 619514
Number of successful extensions: 2252
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2250
length of database: 80,573,946
effective HSP length: 94
effective length of database: 59,954,012
effective search space used: 1438896288
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top