ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast74d03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_466673.1| Oryza sativa (japonica cultivar-group), mRNA 270 4e-69
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 270 4e-69
3dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic D... 270 4e-69
4dbj|AK099736.1| Oryza sativa (japonica cultivar-group) cDNA clon... 270 4e-69
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
6gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
7gb|AC152969.1| Oryza sativa (japonica cultivar-group) chromosome... 52 0.002
8emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete ... 50 0.006
9emb|AL929343.7| Zebrafish DNA sequence from clone CH211-144G12, ... 50 0.006
10ref|XM_466130.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.10
11dbj|AP005611.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
12emb|CR388049.7| Zebrafish DNA sequence from clone CH211-220A11 i... 44 0.40
13emb|BX511174.4| Zebrafish DNA sequence from clone CH211-270L17, ... 44 0.40
14emb|BX511138.10| Zebrafish DNA sequence from clone DKEYP-52D3 in... 44 0.40
15dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
16dbj|AP006857.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
17emb|AL845507.8| Zebrafish DNA sequence from clone CH211-196F15, ... 44 0.40
18emb|CR759791.15| Zebrafish DNA sequence from clone DKEY-66O5 in ... 44 0.40
19gb|AY843529.1| Gallus gallus NOGO isoform A2 (NOGO) mRNA, comple... 42 1.6
20ref|XM_480794.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
21ref|XM_581887.2| PREDICTED: Bos taurus similar to poliovirus rec... 42 1.6
22ref|XM_804065.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 1.6
23ref|XM_810933.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 1.6
24emb|CR376762.12| Zebrafish DNA sequence from clone CH211-81G2 in... 42 1.6
25ref|XM_541178.2| PREDICTED: Canis familiaris similar to fibronec... 42 1.6
26emb|BX927311.7| Zebrafish DNA sequence from clone CH211-235E15 i... 42 1.6
27gb|AF513603.1| Oryza alta strain IRRI 100161 clone 7 internal tr... 42 1.6
28emb|BX640429.1| Bordetella parapertussis strain 12822, complete ... 42 1.6
29emb|BX897736.7| Zebrafish DNA sequence from clone CH211-181B15 i... 42 1.6
30emb|BX855610.5| Zebrafish DNA sequence from clone DKEY-121J17 in... 42 1.6
31gb|AC027708.12| Homo sapiens chromosome 15, clone RP11-82I10, co... 42 1.6
32ref|NM_204366.2| Gallus gallus reticulon 4 (RTN4), mRNA 42 1.6
33tpg|BK004062.1| TPA: TPA_inf: Gallus gallus RTN4-B2 (RTN4) mRNA,... 42 1.6
34tpg|BK004061.1| TPA: TPA_inf: Gallus gallus RTN4-B1 (RTN4) mRNA,... 42 1.6
35emb|BX664707.24| Zebrafish DNA sequence from clone DKEYP-74B6 in... 42 1.6
36gb|AC024651.13| Homo sapiens chromosome 15, clone RP11-753A21, c... 42 1.6
37ref|XM_688095.1| PREDICTED: Danio rerio similar to CG17233-PA, i... 42 1.6
38emb|AL831747.24| Zebrafish DNA sequence from clone CH211-258G4 i... 42 1.6
39emb|BX294661.14| Zebrafish DNA sequence from clone CH211-199I18 ... 42 1.6
40dbj|AP005517.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
41dbj|AP004183.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
42emb|BX936336.10| Zebrafish DNA sequence from clone CH211-287B5 i... 42 1.6
43emb|BX511234.7| Zebrafish DNA sequence from clone DKEY-96I8 in l... 42 1.6
44dbj|AB086148.1| Bos taurus prr2 gene for poliovirus receptor rel... 42 1.6
45emb|AL935326.13| Mouse DNA sequence from clone RP23-10L17 on chr... 42 1.6
46emb|AL935197.7| Zebrafish DNA sequence from clone CH211-255P10 i... 42 1.6
47emb|AL672157.5| Mouse DNA sequence from clone RP24-499M12 on chr... 42 1.6
48ref|NM_197093.1| Oryza sativa (japonica cultivar-group) putative... 40 6.2
49ref|NM_196718.1| Oryza sativa (japonica cultivar-group) hypothet... 40 6.2
50ref|NM_193791.1| Oryza sativa (japonica cultivar-group), predic... 40 6.2
51ref|XM_515773.1| PREDICTED: Pan troglodytes similar to Myc box d... 40 6.2
52gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 6.2
53ref|XM_954070.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.2
54ref|XM_957161.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.2
55ref|XM_326401.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.2
56ref|XM_331610.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.2
57gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.2
58gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 6.2
59ref|XM_849663.1| PREDICTED: Canis familiaris similar to myogenic... 40 6.2
60emb|CR855325.15| Zebrafish DNA sequence from clone DKEY-48K8 in ... 40 6.2
61ref|XM_569748.1| Cryptococcus neoformans var. neoformans JEC21 o... 40 6.2
62gb|AF494422.1| Oryza sativa (japonica cultivar-group) apetala2 d... 40 6.2
63gb|AY345233.1| Oryza sativa transcription factor RCBF3 mRNA, com... 40 6.2
64gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 6.2
65emb|CR407559.8| Zebrafish DNA sequence from clone CH211-283G2 in... 40 6.2
66emb|BX295539.1|NCB1D14 Neurospora crassa genomic DNA, BAC contig... 40 6.2
67gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 6.2
68gb|AC073391.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
69ref|NM_176733.2| Drosophila melanogaster CG6299-RB, transcript v... 40 6.2
70ref|NM_167445.2| Drosophila melanogaster CG6294-RA (CG6294), mRNA 40 6.2
71gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 gen... 40 6.2
72gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare str... 40 6.2
73ref|NM_025422.1| Mus musculus CD302 antigen (Cd302), mRNA 40 6.2
74gb|AF458647.1| Squirrel monkey herpesvirus 1 UL21 gene, partial ... 40 6.2
75dbj|AK002812.1| Mus musculus adult male kidney cDNA, RIKEN full-... 40 6.2
76gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.2
77gb|AC010706.8|AC010706 Drosophila melanogaster, chromosome X, re... 40 6.2
78dbj|AK004267.1| Mus musculus 18-day embryo whole body cDNA, RIKE... 40 6.2
79dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
80dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
81dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
82dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
83gb|AF300970.1| Oryza sativa DRE-binding protein 1A mRNA, complet... 40 6.2
84emb|BX649268.11| Zebrafish DNA sequence from clone DKEY-106J22 i... 40 6.2
85gb|U44127.2|ABU44127 Azospirillum brasilense leader peptide (Trp... 40 6.2
86dbj|AP003202.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
87dbj|AP006859.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
88dbj|AP005488.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
89dbj|AK119316.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
90dbj|AK105599.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
91dbj|AK102471.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
92gb|AC155258.2| Mus musculus BAC clone RP24-83B1 from 12, complet... 40 6.2
93dbj|AK073407.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
94dbj|AK071519.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
95dbj|AK064407.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.2
96gb|AE003499.5| Drosophila melanogaster chromosome X, section 51 ... 40 6.2
97gb|U76897.1|TAU76897 Triticum aestivum beta-tubulin 6 (Tubb6) mR... 40 6.2
98dbj|AP006289.2| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.2
99emb|CT572998.9| Mouse DNA sequence from clone RP23-26C23 on chro... 40 6.2
100gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.2
101dbj|AP000633.4| Homo sapiens genomic DNA, chromosome 11 clone:CM... 40 6.2 
>ref|XM_466673.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1442

 Score =  270 bits (136), Expect = 4e-69
 Identities = 240/272 (88%), Gaps = 2/272 (0%)
 Strand = Plus / Plus

                                                                       
Query: 189 tgccggtccatctcccccgagagccccacggccgctgcggcggacaccgcggcggacgag 248
           ||||||||| ||||| |||||||| |||| ||||| ||||| |||||||| |  ||||||
Sbjct: 250 tgccggtccgtctcctccgagagctccaccgccgccgcggccgacaccgccgacgacgag 309

                                                                       
Query: 249 gaggaggag-ccagccgcgacgagcgaggaggatgatgtggacccgctggcggaggtgtg 307
           ||||||| | |||   |||||  | |||||||| ||  ||||||||||||||||||||||
Sbjct: 310 gaggaggtgaccaagagcgactcg-gaggaggaggagatggacccgctggcggaggtgtg 368

                                                                       
Query: 308 ctacctggacccggacgcggacgcagaggggatccgggagtgggaggtggacttctgctc 367
           ||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 369 ctacctggacccggaggcggacgcggaggggatccgggagtgggagctggacttctgctc 428

                                                                       
Query: 368 gcggcccatcctggacgccaggggcaagaaagtgtgggagctggtggtgtgcgacgccac 427
           ||| || |||||||||||  | || ||||| |||||||||||||||||||||||||| ||
Sbjct: 429 gcgcccaatcctggacgcgcgcgggaagaaggtgtgggagctggtggtgtgcgacgcgac 488

                                           
Query: 428 gctgtccctgcagttcacccgcttcttcccca 459
           ||||||||| ||||||||||||||||||||||
Sbjct: 489 gctgtccctccagttcacccgcttcttcccca 520



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                       
Query: 30  cgcgccatgacgaccgccactgccatcgtcgccggccacggcatcgccttccgccggagc 89
           |||||||||||||||||||| ||||||||||||||||||||| ||||  | |||||||||
Sbjct: 76  cgcgccatgacgaccgccaccgccatcgtcgccggccacggcctcgcgctgcgccggagc 135

                   
Query: 90  ctccacct 97
           || |||||
Sbjct: 136 ctgcacct 143
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  270 bits (136), Expect = 4e-69
 Identities = 240/272 (88%), Gaps = 2/272 (0%)
 Strand = Plus / Plus

                                                                            
Query: 189      tgccggtccatctcccccgagagccccacggccgctgcggcggacaccgcggcggacgag 248
                ||||||||| ||||| |||||||| |||| ||||| ||||| |||||||| |  ||||||
Sbjct: 24020572 tgccggtccgtctcctccgagagctccaccgccgccgcggccgacaccgccgacgacgag 24020631

                                                                            
Query: 249      gaggaggag-ccagccgcgacgagcgaggaggatgatgtggacccgctggcggaggtgtg 307
                ||||||| | |||   |||||  | |||||||| ||  ||||||||||||||||||||||
Sbjct: 24020632 gaggaggtgaccaagagcgactcg-gaggaggaggagatggacccgctggcggaggtgtg 24020690

                                                                            
Query: 308      ctacctggacccggacgcggacgcagaggggatccgggagtgggaggtggacttctgctc 367
                ||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 24020691 ctacctggacccggaggcggacgcggaggggatccgggagtgggagctggacttctgctc 24020750

                                                                            
Query: 368      gcggcccatcctggacgccaggggcaagaaagtgtgggagctggtggtgtgcgacgccac 427
                ||| || |||||||||||  | || ||||| |||||||||||||||||||||||||| ||
Sbjct: 24020751 gcgcccaatcctggacgcgcgcgggaagaaggtgtgggagctggtggtgtgcgacgcgac 24020810

                                                
Query: 428      gctgtccctgcagttcacccgcttcttcccca 459
                ||||||||| ||||||||||||||||||||||
Sbjct: 24020811 gctgtccctccagttcacccgcttcttcccca 24020842



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                            
Query: 30       cgcgccatgacgaccgccactgccatcgtcgccggccacggcatcgccttccgccggagc 89
                |||||||||||||||||||| ||||||||||||||||||||| ||||  | |||||||||
Sbjct: 24020398 cgcgccatgacgaccgccaccgccatcgtcgccggccacggcctcgcgctgcgccggagc 24020457

                        
Query: 90       ctccacct 97
                || |||||
Sbjct: 24020458 ctgcacct 24020465



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 235      ccgcggcggacgaggaggaggag 257
                |||||||||||||||||||||||
Sbjct: 20582686 ccgcggcggacgaggaggaggag 20582664
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>dbj|AP004063.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1476_F05
          Length = 125426

 Score =  270 bits (136), Expect = 4e-69
 Identities = 240/272 (88%), Gaps = 2/272 (0%)
 Strand = Plus / Plus

                                                                         
Query: 189   tgccggtccatctcccccgagagccccacggccgctgcggcggacaccgcggcggacgag 248
             ||||||||| ||||| |||||||| |||| ||||| ||||| |||||||| |  ||||||
Sbjct: 55610 tgccggtccgtctcctccgagagctccaccgccgccgcggccgacaccgccgacgacgag 55669

                                                                         
Query: 249   gaggaggag-ccagccgcgacgagcgaggaggatgatgtggacccgctggcggaggtgtg 307
             ||||||| | |||   |||||  | |||||||| ||  ||||||||||||||||||||||
Sbjct: 55670 gaggaggtgaccaagagcgactcg-gaggaggaggagatggacccgctggcggaggtgtg 55728

                                                                         
Query: 308   ctacctggacccggacgcggacgcagaggggatccgggagtgggaggtggacttctgctc 367
             ||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 55729 ctacctggacccggaggcggacgcggaggggatccgggagtgggagctggacttctgctc 55788

                                                                         
Query: 368   gcggcccatcctggacgccaggggcaagaaagtgtgggagctggtggtgtgcgacgccac 427
             ||| || |||||||||||  | || ||||| |||||||||||||||||||||||||| ||
Sbjct: 55789 gcgcccaatcctggacgcgcgcgggaagaaggtgtgggagctggtggtgtgcgacgcgac 55848

                                             
Query: 428   gctgtccctgcagttcacccgcttcttcccca 459
             ||||||||| ||||||||||||||||||||||
Sbjct: 55849 gctgtccctccagttcacccgcttcttcccca 55880



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                         
Query: 30    cgcgccatgacgaccgccactgccatcgtcgccggccacggcatcgccttccgccggagc 89
             |||||||||||||||||||| ||||||||||||||||||||| ||||  | |||||||||
Sbjct: 55436 cgcgccatgacgaccgccaccgccatcgtcgccggccacggcctcgcgctgcgccggagc 55495

                     
Query: 90    ctccacct 97
             || |||||
Sbjct: 55496 ctgcacct 55503
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>dbj|AK099736.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090G20, full
           insert sequence
          Length = 1443

 Score =  270 bits (136), Expect = 4e-69
 Identities = 240/272 (88%), Gaps = 2/272 (0%)
 Strand = Plus / Plus

                                                                       
Query: 189 tgccggtccatctcccccgagagccccacggccgctgcggcggacaccgcggcggacgag 248
           ||||||||| ||||| |||||||| |||| ||||| ||||| |||||||| |  ||||||
Sbjct: 251 tgccggtccgtctcctccgagagctccaccgccgccgcggccgacaccgccgacgacgag 310

                                                                       
Query: 249 gaggaggag-ccagccgcgacgagcgaggaggatgatgtggacccgctggcggaggtgtg 307
           ||||||| | |||   |||||  | |||||||| ||  ||||||||||||||||||||||
Sbjct: 311 gaggaggtgaccaagagcgactcg-gaggaggaggagatggacccgctggcggaggtgtg 369

                                                                       
Query: 308 ctacctggacccggacgcggacgcagaggggatccgggagtgggaggtggacttctgctc 367
           ||||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 370 ctacctggacccggaggcggacgcggaggggatccgggagtgggagctggacttctgctc 429

                                                                       
Query: 368 gcggcccatcctggacgccaggggcaagaaagtgtgggagctggtggtgtgcgacgccac 427
           ||| || |||||||||||  | || ||||| |||||||||||||||||||||||||| ||
Sbjct: 430 gcgcccaatcctggacgcgcgcgggaagaaggtgtgggagctggtggtgtgcgacgcgac 489

                                           
Query: 428 gctgtccctgcagttcacccgcttcttcccca 459
           ||||||||| ||||||||||||||||||||||
Sbjct: 490 gctgtccctccagttcacccgcttcttcccca 521



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 62/68 (91%)
 Strand = Plus / Plus

                                                                       
Query: 30  cgcgccatgacgaccgccactgccatcgtcgccggccacggcatcgccttccgccggagc 89
           |||||||||||||||||||| ||||||||||||||||||||| ||||  | |||||||||
Sbjct: 77  cgcgccatgacgaccgccaccgccatcgtcgccggccacggcctcgcgctgcgccggagc 136

                   
Query: 90  ctccacct 97
           || |||||
Sbjct: 137 ctgcacct 144
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
             complete sequence
          Length = 29737217

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                         
Query: 394   agaaagtgtgggagctggtggtgtgcgacgccacgctgtccctgcagttcacccgcttct 453
             |||| ||||||||| |||||||||||||| | ||  |||||||  |||||||  ||||||
Sbjct: 69187 agaatgtgtgggagttggtggtgtgcgacacgacattgtccctctagttcacttgcttct 69128

                   
Query: 454   tcccca 459
             ||||||
Sbjct: 69127 tcccca 69122
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>gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0036D10,
             complete sequence
          Length = 156772

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                         
Query: 394   agaaagtgtgggagctggtggtgtgcgacgccacgctgtccctgcagttcacccgcttct 453
             |||| ||||||||| |||||||||||||| | ||  |||||||  |||||||  ||||||
Sbjct: 69187 agaatgtgtgggagttggtggtgtgcgacacgacattgtccctctagttcacttgcttct 69128

                   
Query: 454   tcccca 459
             ||||||
Sbjct: 69127 tcccca 69122
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>gb|AC152969.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0098I11, complete sequence
          Length = 122970

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Minus

                                                                         
Query: 394   agaaagtgtgggagctggtggtgtgcgacgccacgctgtccctgcagttcacccgcttct 453
             |||| ||||||||| |||||||||||||| | ||  |||||||  |||||||  ||||||
Sbjct: 78574 agaatgtgtgggagttggtggtgtgcgacacgacattgtccctctagttcacttgcttct 78515

                   
Query: 454   tcccca 459
             ||||||
Sbjct: 78514 tcccca 78509
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>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29
          Length = 292200

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 218   ggccgctgcggcggacaccgcggcggacg 246
             |||||| ||||||||||||||||||||||
Sbjct: 16078 ggccgccgcggcggacaccgcggcggacg 16050
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>emb|AL929343.7| Zebrafish DNA sequence from clone CH211-144G12, complete sequence
          Length = 150202

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                       
Query: 246    gaggaggaggagccagccgcgacga 270
              |||||||||||||||||||||||||
Sbjct: 100702 gaggaggaggagccagccgcgacga 100726
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>ref|XM_466130.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1098

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                  
Query: 235 ccgcggcggacgaggaggaggag 257
           |||||||||||||||||||||||
Sbjct: 538 ccgcggcggacgaggaggaggag 516
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>dbj|AP005611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0051E21
          Length = 137959

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 235   ccgcggcggacgaggaggaggag 257
             |||||||||||||||||||||||
Sbjct: 78244 ccgcggcggacgaggaggaggag 78222
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>emb|CR388049.7| Zebrafish DNA sequence from clone CH211-220A11 in linkage group 5,
              complete sequence
          Length = 201176

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 241    cggacgaggaggaggagccagccgcg 266
              ||||||||||||||||||| ||||||
Sbjct: 188544 cggacgaggaggaggagccggccgcg 188569
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>emb|BX511174.4| Zebrafish DNA sequence from clone CH211-270L17, complete sequence
          Length = 133968

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 241   cggacgaggaggaggagccagccgcg 266
             ||||||||||||||||||| ||||||
Sbjct: 45656 cggacgaggaggaggagccggccgcg 45681
to top
>emb|BX511138.10| Zebrafish DNA sequence from clone DKEYP-52D3 in linkage group 5, complete
              sequence
          Length = 190187

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 241    cggacgaggaggaggagccagccgcg 266
              ||||||||||||||||||| ||||||
Sbjct: 187091 cggacgaggaggaggagccggccgcg 187116
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 43      ccgccactgccatcgtcgccggccac 68
               ||||| ||||||||||||||||||||
Sbjct: 6839529 ccgccgctgccatcgtcgccggccac 6839504



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 237     gcggcggacgaggaggaggag 257
               |||||||||||||||||||||
Sbjct: 7775037 gcggcggacgaggaggaggag 7775057



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 49      ctgccatcgtcgccggccac 68
               ||||||||||||||||||||
Sbjct: 6617664 ctgccatcgtcgccggccac 6617683
to top
>dbj|AP006857.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0002E10
          Length = 140486

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 43    ccgccactgccatcgtcgccggccac 68
             ||||| ||||||||||||||||||||
Sbjct: 90248 ccgccgctgccatcgtcgccggccac 90223
to top
>emb|AL845507.8| Zebrafish DNA sequence from clone CH211-196F15, complete sequence
          Length = 166074

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 241   cggacgaggaggaggagccagccgcg 266
             |||| |||||||||||||||||||||
Sbjct: 75358 cggaggaggaggaggagccagccgcg 75383
to top
>emb|CR759791.15| Zebrafish DNA sequence from clone DKEY-66O5 in linkage group 22,
             complete sequence
          Length = 104755

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 241   cggacgaggaggaggagccagccgcg 266
             ||||||||||||||||||| ||||||
Sbjct: 87928 cggacgaggaggaggagccggccgcg 87953
to top
>gb|AY843529.1| Gallus gallus NOGO isoform A2 (NOGO) mRNA, complete cds,
           alternatively spliced
          Length = 4055

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 237 gcggcggacgaggaggaggag 257
           |||||||||||||||||||||
Sbjct: 50  gcggcggacgaggaggaggag 30
to top
>ref|XM_480794.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 621

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 237 gcggcggacgaggaggaggag 257
           |||||||||||||||||||||
Sbjct: 215 gcggcggacgaggaggaggag 195
to top
>ref|XM_581887.2| PREDICTED: Bos taurus similar to poliovirus receptor-related 2
           (herpesvirus entry mediator B) (prr2), mRNA
          Length = 2620

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 404 ggagctggtggtgtgcgacgccacgctgtccct 436
           |||||||| |||| | |||||||||||||||||
Sbjct: 530 ggagctggaggtgcgggacgccacgctgtccct 562
to top
>ref|XM_804065.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053511229.100) partial mRNA
          Length = 684

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 171 acgccgtcgccgaggccctgc 191
           |||||||||||||||||||||
Sbjct: 446 acgccgtcgccgaggccctgc 466
to top
>ref|XM_810933.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053511589.250) partial mRNA
          Length = 684

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 171 acgccgtcgccgaggccctgc 191
           |||||||||||||||||||||
Sbjct: 446 acgccgtcgccgaggccctgc 466
to top
>emb|CR376762.12| Zebrafish DNA sequence from clone CH211-81G2 in linkage group 8, complete
              sequence
          Length = 183602

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 246    gaggaggaggagccagccgcg 266
              |||||||||||||||||||||
Sbjct: 142265 gaggaggaggagccagccgcg 142285
to top
>ref|XM_541178.2| PREDICTED: Canis familiaris similar to fibronectin type III domain
            containing 1 (LOC484061), mRNA
          Length = 5679

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 246  gaggaggaggagccagccgcg 266
            |||||||||||||||||||||
Sbjct: 1888 gaggaggaggagccagccgcg 1908
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>emb|BX927311.7| Zebrafish DNA sequence from clone CH211-235E15 in linkage group 24,
             complete sequence
          Length = 162570

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 246   gaggaggaggagccagccgcgacga 270
             |||||||||||||| ||||||||||
Sbjct: 33161 gaggaggaggagccggccgcgacga 33137
to top
>gb|AF513603.1| Oryza alta strain IRRI 100161 clone 7 internal transcribed spacer
           1, 5.8S ribosomal RNA gene, and internal transcribed
           spacer 2, complete sequence
          Length = 604

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 51  gccatcgtcgccggccacggc 71
           |||||||||||||||||||||
Sbjct: 563 gccatcgtcgccggccacggc 543
to top
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14
          Length = 344321

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 53     catcgtcgccggccacggcatcgcc 77
              |||| ||||||||||||||||||||
Sbjct: 237611 catcctcgccggccacggcatcgcc 237635
to top
>emb|BX897736.7| Zebrafish DNA sequence from clone CH211-181B15 in linkage group 17,
             complete sequence
          Length = 141987

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 246   gaggaggaggagccagccgcg 266
             |||||||||||||||||||||
Sbjct: 74268 gaggaggaggagccagccgcg 74248
to top
>emb|BX855610.5| Zebrafish DNA sequence from clone DKEY-121J17 in linkage group 3 Contains
              the gene for a novel protein similar to vertebrate protein
              kinase, cGMP-dependent, type I (PRKG1), the gene for a
              novel protein similar to vertebrate potassium channel,
              subfamily K, member 2 (KCNK2), the gene for a novel protein
              similar to human and mouse squamous cell carcinoma antigen
              recognized by T cells 2 (SART2), the gene for a novel
              protein similar to vertebrate SET and MYND domain
              containing 2 (SYMD2), a novel gene and six CpG islands,
              complete sequence
          Length = 139210

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 241    cggacgaggaggaggagccag 261
              |||||||||||||||||||||
Sbjct: 104418 cggacgaggaggaggagccag 104398
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>gb|AC027708.12| Homo sapiens chromosome 15, clone RP11-82I10, complete sequence
          Length = 176613

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 89     cctccaccttcccaacccgcc 109
              |||||||||||||||||||||
Sbjct: 173740 cctccaccttcccaacccgcc 173720
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>ref|NM_204366.2| Gallus gallus reticulon 4 (RTN4), mRNA
          Length = 4055

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 237 gcggcggacgaggaggaggag 257
           |||||||||||||||||||||
Sbjct: 50  gcggcggacgaggaggaggag 30
to top
>tpg|BK004062.1| TPA: TPA_inf: Gallus gallus RTN4-B2 (RTN4) mRNA, complete cds
          Length = 2573

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 237  gcggcggacgaggaggaggag 257
            |||||||||||||||||||||
Sbjct: 1013 gcggcggacgaggaggaggag 993
to top
>tpg|BK004061.1| TPA: TPA_inf: Gallus gallus RTN4-B1 (RTN4) mRNA, complete cds
          Length = 2516

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 237  gcggcggacgaggaggaggag 257
            |||||||||||||||||||||
Sbjct: 1013 gcggcggacgaggaggaggag 993
to top
>emb|BX664707.24| Zebrafish DNA sequence from clone DKEYP-74B6 in linkage group 7, complete
              sequence
          Length = 210220

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 246    gaggaggaggagccagccgcg 266
              |||||||||||||||||||||
Sbjct: 174748 gaggaggaggagccagccgcg 174728
to top
>gb|AC024651.13| Homo sapiens chromosome 15, clone RP11-753A21, complete sequence
          Length = 212185

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 89     cctccaccttcccaacccgcc 109
              |||||||||||||||||||||
Sbjct: 197283 cctccaccttcccaacccgcc 197303
to top
>ref|XM_688095.1| PREDICTED: Danio rerio similar to CG17233-PA, isoform A (LOC564766),
            mRNA
          Length = 8010

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 237  gcggcggacgaggaggaggagccag 261
            |||||||| ||||||||||||||||
Sbjct: 6073 gcggcggaggaggaggaggagccag 6049
to top
>emb|AL831747.24| Zebrafish DNA sequence from clone CH211-258G4 in linkage group 9,
              complete sequence
          Length = 156348

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 246    gaggaggaggagccagccgcg 266
              |||||||||||||||||||||
Sbjct: 138789 gaggaggaggagccagccgcg 138809
to top
>emb|BX294661.14| Zebrafish DNA sequence from clone CH211-199I18 in linkage group 20,
              complete sequence
          Length = 197237

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 246    gaggaggaggagccagccgcg 266
              |||||||||||||||||||||
Sbjct: 180900 gaggaggaggagccagccgcg 180880
to top
>dbj|AP005517.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OSJNBb0090H20
          Length = 132628

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 237  gcggcggacgaggaggaggag 257
            |||||||||||||||||||||
Sbjct: 6324 gcggcggacgaggaggaggag 6344
to top
>dbj|AP004183.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1221_H04
          Length = 129387

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 237    gcggcggacgaggaggaggag 257
              |||||||||||||||||||||
Sbjct: 115760 gcggcggacgaggaggaggag 115780
to top
>emb|BX936336.10| Zebrafish DNA sequence from clone CH211-287B5 in linkage group 19,
             complete sequence
          Length = 151787

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 246   gaggaggaggagccagccgcg 266
             |||||||||||||||||||||
Sbjct: 18473 gaggaggaggagccagccgcg 18453
to top
>emb|BX511234.7| Zebrafish DNA sequence from clone DKEY-96I8 in linkage group 10,
             complete sequence
          Length = 112069

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 246   gaggaggaggagccagccgcg 266
             |||||||||||||||||||||
Sbjct: 44162 gaggaggaggagccagccgcg 44182
to top
>dbj|AB086148.1| Bos taurus prr2 gene for poliovirus receptor related-gene 2,
           partial cds
          Length = 343

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 404 ggagctggtggtgtgcgacgccacgctgtccct 436
           |||||||| |||| | |||||||||||||||||
Sbjct: 238 ggagctggaggtgcgggacgccacgctgtccct 270
to top
>emb|AL935326.13| Mouse DNA sequence from clone RP23-10L17 on chromosome 2, complete
              sequence
          Length = 224044

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 44     cgccactgccatcgtcgccgg 64
              |||||||||||||||||||||
Sbjct: 119196 cgccactgccatcgtcgccgg 119176
to top
>emb|AL935197.7| Zebrafish DNA sequence from clone CH211-255P10 in linkage group 12,
              complete sequence
          Length = 193113

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 237    gcggcggacgaggaggaggagccag 261
              |||||||| ||||||||||||||||
Sbjct: 190812 gcggcggaggaggaggaggagccag 190788
to top
>emb|AL672157.5| Mouse DNA sequence from clone RP24-499M12 on chromosome 2, complete
             sequence
          Length = 67987

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 180   ccgaggccctgccggtccatc 200
             |||||||||||||||||||||
Sbjct: 42356 ccgaggccctgccggtccatc 42336
to top
>ref|NM_197093.1| Oryza sativa (japonica cultivar-group) putative zinc finger protein
           (OSJNBa0029C15.10), mRNA
          Length = 1113

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 237 gcggcggacgaggaggagga 256
           ||||||||||||||||||||
Sbjct: 278 gcggcggacgaggaggagga 259
to top
>ref|NM_196718.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBb0015F09b.16), mRNA
          Length = 957

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 235 ccgcggcggacgaggaggaggagc 258
           |||||||||||| |||||||||||
Sbjct: 157 ccgcggcggacggggaggaggagc 134
to top
>ref|NM_193791.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1758

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 235 ccgcggcggacgaggaggaggagc 258
           ||||||| ||||||||||||||||
Sbjct: 91  ccgcggccgacgaggaggaggagc 68
to top
>ref|XM_515773.1| PREDICTED: Pan troglodytes similar to Myc box dependent interacting
            protein 1 (Bridging integrator 1) (Amphiphysin-like
            protein) (Amphiphysin II) (Box-dependent myc-interacting
            protein-1) (LOC459590), mRNA
          Length = 4869

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 330  gcagaggggatccgggagtg 349
            ||||||||||||||||||||
Sbjct: 2881 gcagaggggatccgggagtg 2900
to top
>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete
               sequence
          Length = 2105742

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 264     gcgacgagcgaggaggatga 283
               ||||||||||||||||||||
Sbjct: 1623210 gcgacgagcgaggaggatga 1623191
to top
>ref|XM_954070.1| Neurospora crassa OR74A hypothetical protein (NCU09219.1) partial
           mRNA
          Length = 5517

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 193 ggtccatctcccccgagagc 212
           ||||||||||||||||||||
Sbjct: 26  ggtccatctcccccgagagc 45
to top
>ref|XM_957161.1| Neurospora crassa OR74A hypothetical protein (NCU06547.1) partial
           mRNA
          Length = 1875

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 436 tgcagttcacccgcttcttc 455
           ||||||||||||||||||||
Sbjct: 2   tgcagttcacccgcttcttc 21
to top
>ref|XM_326401.1| Neurospora crassa OR74A hypothetical protein (NCU06547.1) partial
           mRNA
          Length = 1875

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 436 tgcagttcacccgcttcttc 455
           ||||||||||||||||||||
Sbjct: 2   tgcagttcacccgcttcttc 21
to top
>ref|XM_331610.1| Neurospora crassa OR74A hypothetical protein (NCU09219.1) partial
           mRNA
          Length = 5517

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 193 ggtccatctcccccgagagc 212
           ||||||||||||||||||||
Sbjct: 26  ggtccatctcccccgagagc 45
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 239     ggcggacgaggaggaggagc 258
               ||||||||||||||||||||
Sbjct: 9462606 ggcggacgaggaggaggagc 9462625
to top
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 34      ccatgacgaccgccactgccatcg 57
               ||||||| ||||||||||||||||
Sbjct: 1937123 ccatgacaaccgccactgccatcg 1937100
to top
>ref|XM_849663.1| PREDICTED: Canis familiaris similar to myogenic factor 3
           (LOC611940), mRNA
          Length = 960

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 197 catctcccccgagagccccacggc 220
           ||||||| ||||||||||||||||
Sbjct: 774 catctccaccgagagccccacggc 797
to top
>emb|CR855325.15| Zebrafish DNA sequence from clone DKEY-48K8 in linkage group 5,
             complete sequence
          Length = 198456

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 246   gaggaggaggagccagccgc 265
             ||||||||||||||||||||
Sbjct: 86405 gaggaggaggagccagccgc 86386
to top
>ref|XM_569748.1| Cryptococcus neoformans var. neoformans JEC21 oxidoreductase
           (CNC05450) partial mRNA
          Length = 986

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 264 gcgacgagcgaggaggatga 283
           ||||||||||||||||||||
Sbjct: 285 gcgacgagcgaggaggatga 266
to top
>gb|AF494422.1| Oryza sativa (japonica cultivar-group) apetala2 domain-containing
           CBF1-like protein mRNA, complete cds
          Length = 717

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 gccacgccgtcgccgaggcc 187
           ||||||||||||||||||||
Sbjct: 401 gccacgccgtcgccgaggcc 420
to top
>gb|AY345233.1| Oryza sativa transcription factor RCBF3 mRNA, complete cds
          Length = 850

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 gccacgccgtcgccgaggcc 187
           ||||||||||||||||||||
Sbjct: 463 gccacgccgtcgccgaggcc 482
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 170     cacgccgtcgccgaggccct 189
               ||||||||||||||||||||
Sbjct: 3908308 cacgccgtcgccgaggccct 3908289
to top
>emb|CR407559.8| Zebrafish DNA sequence from clone CH211-283G2 in linkage group 5,
            complete sequence
          Length = 149707

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 246  gaggaggaggagccagccgc 265
            ||||||||||||||||||||
Sbjct: 1971 gaggaggaggagccagccgc 1952
to top
>emb|BX295539.1|NCB1D14 Neurospora crassa genomic DNA, BAC contig B1D14
          Length = 138898

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    ggtccatctcccccgagagc 212
              ||||||||||||||||||||
Sbjct: 132300 ggtccatctcccccgagagc 132281
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 58      tcgccggccacggcatcgccttcc 81
               ||||||||| ||||||||||||||
Sbjct: 1442722 tcgccggcctcggcatcgccttcc 1442699
to top
>gb|AC073391.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             nbeb0015F09b, complete sequence
          Length = 108964

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 235   ccgcggcggacgaggaggaggagc 258
             |||||||||||| |||||||||||
Sbjct: 63947 ccgcggcggacggggaggaggagc 63970
to top
>ref|NM_176733.2| Drosophila melanogaster CG6299-RB, transcript variant B (CG6299),
           mRNA
          Length = 1658

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 238 cggcggacgaggaggaggag 257
           ||||||||||||||||||||
Sbjct: 355 cggcggacgaggaggaggag 336
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>ref|NM_167445.2| Drosophila melanogaster CG6294-RA (CG6294), mRNA
          Length = 1694

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 238  cggcggacgaggaggaggag 257
            ||||||||||||||||||||
Sbjct: 1254 cggcggacgaggaggaggag 1235
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>gb|AC087182.12| Oryza sativa chromosome 10 BAC OSJNBa0029C15 genomic sequence,
            complete sequence
          Length = 148816

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 237  gcggcggacgaggaggagga 256
            ||||||||||||||||||||
Sbjct: 5185 gcggcggacgaggaggagga 5166
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>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0002D01, from chromosome 3, complete sequence
          Length = 187589

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 239    ggcggacgaggaggaggagc 258
              ||||||||||||||||||||
Sbjct: 160006 ggcggacgaggaggaggagc 160025
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>ref|NM_025422.1| Mus musculus CD302 antigen (Cd302), mRNA
          Length = 1259

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 44  cgccactgccatcgtcgccg 63
           ||||||||||||||||||||
Sbjct: 342 cgccactgccatcgtcgccg 361
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>gb|AF458647.1| Squirrel monkey herpesvirus 1 UL21 gene, partial cds; UL20, UL19, and
            UL18 genes, complete cds; and UL15 gene, partial cds
          Length = 9555

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 8    tgtgtgtggccgtggagggg 27
            ||||||||||||||||||||
Sbjct: 8856 tgtgtgtggccgtggagggg 8837
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>dbj|AK002812.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched
          library, clone:0610038N09 product:hypothetical C-type
          lectin domain containing protein, full insert sequence
          Length = 991

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 44 cgccactgccatcgtcgccg 63
          ||||||||||||||||||||
Sbjct: 47 cgccactgccatcgtcgccg 66
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 170     cacgccgtcgccgaggccct 189
               ||||||||||||||||||||
Sbjct: 2046773 cacgccgtcgccgaggccct 2046792
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>gb|AC010706.8|AC010706 Drosophila melanogaster, chromosome X, region 13C-13E, BAC clone
              BACR36D15, complete sequence
          Length = 159513

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 238    cggcggacgaggaggaggag 257
              ||||||||||||||||||||
Sbjct: 101163 cggcggacgaggaggaggag 101144
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>dbj|AK004267.1| Mus musculus 18-day embryo whole body cDNA, RIKEN full-length
           enriched library, clone:1110055L24 product:18-day embryo
           whole body cDNA, RIKEN full-length enriched library,
           clone:1110055L24 product:hypothetical C-type lectin
           domain containing protein, full insert sequence, full
           insert sequence
          Length = 1259

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 44  cgccactgccatcgtcgccg 63
           ||||||||||||||||||||
Sbjct: 342 cgccactgccatcgtcgccg 361
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 237      gcggcggacgaggaggagga 256
                ||||||||||||||||||||
Sbjct: 17926856 gcggcggacgaggaggagga 17926875



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 235      ccgcggcggacgaggaggaggagc 258
                |||||||||||| |||||||||||
Sbjct: 15480601 ccgcggcggacggggaggaggagc 15480624
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 168      gccacgccgtcgccgaggcc 187
                ||||||||||||||||||||
Sbjct: 20103360 gccacgccgtcgccgaggcc 20103341
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 239     ggcggacgaggaggaggagc 258
               ||||||||||||||||||||
Sbjct: 9460727 ggcggacgaggaggaggagc 9460746
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 235      ccgcggcggacgaggaggaggagc 258
                ||||||| ||||||||||||||||
Sbjct: 18183784 ccgcggccgacgaggaggaggagc 18183761
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>gb|AF300970.1| Oryza sativa DRE-binding protein 1A mRNA, complete cds
          Length = 895

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 gccacgccgtcgccgaggcc 187
           ||||||||||||||||||||
Sbjct: 467 gccacgccgtcgccgaggcc 486
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>emb|BX649268.11| Zebrafish DNA sequence from clone DKEY-106J22 in linkage group 21,
             complete sequence
          Length = 172409

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 246   gaggaggaggagccagccgc 265
             ||||||||||||||||||||
Sbjct: 82730 gaggaggaggagccagccgc 82711
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>gb|U44127.2|ABU44127 Azospirillum brasilense leader peptide (TrpL) and anthranilate
            synthase TrpE(G) genes, complete cds
          Length = 3865

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 172  cgccgtcgccgaggccctgc 191
            ||||||||||||||||||||
Sbjct: 1531 cgccgtcgccgaggccctgc 1550
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>dbj|AP003202.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1075D06
          Length = 130528

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 235   ccgcggcggacgaggaggaggagc 258
             ||||||| ||||||||||||||||
Sbjct: 35229 ccgcggccgacgaggaggaggagc 35206
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>dbj|AP006859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
             fosmid clone:OSJNOa273B05
          Length = 41326

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 168   gccacgccgtcgccgaggcc 187
             ||||||||||||||||||||
Sbjct: 38286 gccacgccgtcgccgaggcc 38267
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>dbj|AP005488.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0003D23
          Length = 151604

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    ctgccatcgtcgccggccac 68
             ||||||||||||||||||||
Sbjct: 51011 ctgccatcgtcgccggccac 51030
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>dbj|AK119316.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-130-H05, full
           insert sequence
          Length = 2536

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 235 ccgcggcggacgaggaggaggagc 258
           ||||||| ||||||||||||||||
Sbjct: 577 ccgcggccgacgaggaggaggagc 554
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>dbj|AK105599.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-A04, full
           insert sequence
          Length = 955

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 gccacgccgtcgccgaggcc 187
           ||||||||||||||||||||
Sbjct: 515 gccacgccgtcgccgaggcc 534
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>dbj|AK102471.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033094G14, full
           insert sequence
          Length = 1439

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 237 gcggcggacgaggaggagga 256
           ||||||||||||||||||||
Sbjct: 322 gcggcggacgaggaggagga 303
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>gb|AC155258.2| Mus musculus BAC clone RP24-83B1 from 12, complete sequence
          Length = 221264

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 371   gcccatcctggacgccaggg 390
             ||||||||||||||||||||
Sbjct: 26373 gcccatcctggacgccaggg 26354
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>dbj|AK073407.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033041L15, full
           insert sequence
          Length = 1217

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 237 gcggcggacgaggaggagga 256
           ||||||||||||||||||||
Sbjct: 111 gcggcggacgaggaggagga 92
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>dbj|AK071519.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099L23, full
           insert sequence
          Length = 909

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 168 gccacgccgtcgccgaggcc 187
           ||||||||||||||||||||
Sbjct: 481 gccacgccgtcgccgaggcc 500
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>dbj|AK064407.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-H11, full
           insert sequence
          Length = 1474

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 237 gcggcggacgaggaggagga 256
           ||||||||||||||||||||
Sbjct: 352 gcggcggacgaggaggagga 333
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>gb|AE003499.5| Drosophila melanogaster chromosome X, section 51 of 74 of the complete
             sequence
          Length = 300896

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 238   cggcggacgaggaggaggag 257
             ||||||||||||||||||||
Sbjct: 59061 cggcggacgaggaggaggag 59042
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>gb|U76897.1|TAU76897 Triticum aestivum beta-tubulin 6 (Tubb6) mRNA, partial cds
          Length = 1389

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 246  gaggaggaggagccagccgc 265
            ||||||||||||||||||||
Sbjct: 1294 gaggaggaggagccagccgc 1313
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>dbj|AP006289.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-466C23, complete
             sequence
          Length = 166042

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   ggacgaggaggaggagccag 261
             ||||||||||||||||||||
Sbjct: 42280 ggacgaggaggaggagccag 42261
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>emb|CT572998.9| Mouse DNA sequence from clone RP23-26C23 on chromosome 12, complete
             sequence
          Length = 180742

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 371   gcccatcctggacgccaggg 390
             ||||||||||||||||||||
Sbjct: 88202 gcccatcctggacgccaggg 88183
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 237      gcggcggacgaggaggagga 256
                ||||||||||||||||||||
Sbjct: 17936109 gcggcggacgaggaggagga 17936128



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 235      ccgcggcggacgaggaggaggagc 258
                |||||||||||| |||||||||||
Sbjct: 15488842 ccgcggcggacggggaggaggagc 15488865
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>dbj|AP000633.4| Homo sapiens genomic DNA, chromosome 11 clone:CMB9-7G15, complete
             sequence
          Length = 110892

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 242   ggacgaggaggaggagccag 261
             ||||||||||||||||||||
Sbjct: 49752 ggacgaggaggaggagccag 49733


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,088,436
Number of Sequences: 3902068
Number of extensions: 4088436
Number of successful extensions: 88312
Number of sequences better than 10.0: 101
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87098
Number of HSP's gapped (non-prelim): 1212
length of query: 463
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 441
effective length of database: 17,147,199,772
effective search space: 7561915099452
effective search space used: 7561915099452
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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