| Clone Name | bast74c09 |
|---|---|
| Clone Library Name | barley_pub |
>MEN8_SILLA (O24356) MEN-8 protein precursor| Length = 100 Score = 36.6 bits (83), Expect = 0.038 Identities = 18/60 (30%), Positives = 24/60 (40%) Frame = +2 Query: 212 CRTYCTVGSTEASPSSACCGAVRGGDFHRLCQYRSVLPNDIDANRAMQIPGKCGYGAANC 391 C Y G+ +PS CC A+ G + +C V A Q+P C A NC Sbjct: 48 CAPYVVPGAVNTNPSQECCAALSGVNHDCMCNTLRV---------ASQLPSSCNLAALNC 98
>NLTP4_ORYSA (Q42976) Nonspecific lipid-transfer protein 4 precursor (LTP 4)| Length = 121 Score = 33.1 bits (74), Expect = 0.42 Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 14/80 (17%) Frame = +2 Query: 188 DTGSMVRNCRTYCTVGSTEASPSSACCGAVR--------GGDFHRLCQYRSVLPN----- 328 D S + C +Y V E+SPSS+CC VR D C S L N Sbjct: 34 DVTSSIAPCLSY--VMGRESSPSSSCCSGVRTLNGKASSSADRRTAC---SCLKNMASSF 88 Query: 329 -DIDANRAMQIPGKCGYGAA 385 +++ A IP KCG A Sbjct: 89 RNLNMGNAASIPSKCGVSVA 108
>M7_LILHE (Q40190) M7 protein precursor (LHM7)| Length = 89 Score = 30.8 bits (68), Expect = 2.1 Identities = 19/71 (26%), Positives = 31/71 (43%) Frame = +2 Query: 179 CNVDTGSMVRNCRTYCTVGSTEASPSSACCGAVRGGDFHRLCQYRSVLPNDIDANRAMQI 358 C+ G ++ C Y GS A PS CC A++ + LC+ +++ + + Sbjct: 28 CSAAIGELM-TCGPYVLPGSNGA-PSEQCCSALKAVNHGCLCETINIISS---------L 76 Query: 359 PGKCGYGAANC 391 P C A NC Sbjct: 77 PDHCSLPAVNC 87
>LIM2_LILLO (Q43534) LIM2 protein precursor| Length = 90 Score = 30.8 bits (68), Expect = 2.1 Identities = 19/71 (26%), Positives = 31/71 (43%) Frame = +2 Query: 179 CNVDTGSMVRNCRTYCTVGSTEASPSSACCGAVRGGDFHRLCQYRSVLPNDIDANRAMQI 358 C+ G ++ C Y G+ A PS CC A+R + LC+ +++ + + Sbjct: 29 CSAAIGELM-TCGPYVLPGNNGA-PSEQCCSALRAVNHGCLCETINIISS---------L 77 Query: 359 PGKCGYGAANC 391 P C A NC Sbjct: 78 PDHCSLPAVNC 88
>LIM1_LILLO (Q43533) LIM1 protein precursor| Length = 90 Score = 30.8 bits (68), Expect = 2.1 Identities = 19/71 (26%), Positives = 31/71 (43%) Frame = +2 Query: 179 CNVDTGSMVRNCRTYCTVGSTEASPSSACCGAVRGGDFHRLCQYRSVLPNDIDANRAMQI 358 C+ G ++ C Y G+ A PS CC A+R + LC+ +++ + + Sbjct: 29 CSAAIGELM-TCGPYVLPGNNGA-PSEQCCSALRAVNHGCLCETINIISS---------L 77 Query: 359 PGKCGYGAANC 391 P C A NC Sbjct: 78 PDHCSLPAVNC 88
>NLTP2_ORYSA (Q42978) Nonspecific lipid-transfer protein 2 precursor (LTP 2)| Length = 118 Score = 30.4 bits (67), Expect = 2.7 Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 11/70 (15%) Frame = +2 Query: 197 SMVRNCRTYCTVGSTEASPSSACCGAVRG--------GDFHRLCQYRSVLPNDI---DAN 343 S V C +Y GS PS+ACC VR D C + I +A Sbjct: 35 SAVSPCLSYARGGS---GPSAACCSGVRSLNSAASTTADRRTACNCLKNVAGSISGLNAG 91 Query: 344 RAMQIPGKCG 373 A IP KCG Sbjct: 92 NAASIPSKCG 101
>NLTP1_ORYSA (P23096) Nonspecific lipid-transfer protein 1 precursor (LTP 1)| (PAPI) Length = 116 Score = 30.4 bits (67), Expect = 2.7 Identities = 24/70 (34%), Positives = 26/70 (37%), Gaps = 11/70 (15%) Frame = +2 Query: 197 SMVRNCRTYCTVGSTEASPSSACCGAVRG--------GDFHRLCQYRSVLPNDI---DAN 343 S V C TY G A PS+ACC VR D C I +A Sbjct: 33 SAVGPCLTYARGG---AGPSAACCSGVRSLFAAASTTADRRTACNCLKNAARGIKGLNAG 89 Query: 344 RAMQIPGKCG 373 A IP KCG Sbjct: 90 NAASIPSKCG 99
>MC1_PINRA (O24493) Male-cone protein 1 precursor (PRMC1)| Length = 92 Score = 30.0 bits (66), Expect = 3.6 Identities = 15/60 (25%), Positives = 23/60 (38%) Frame = +2 Query: 212 CRTYCTVGSTEASPSSACCGAVRGGDFHRLCQYRSVLPNDIDANRAMQIPGKCGYGAANC 391 C + + S PSS CC A++G +C+ + +P KC A C Sbjct: 38 CTSAVGLSSNGVKPSSECCDALKGTSTSCVCK---------SVRAVISLPAKCNLPALTC 88
>LIM3_LILLO (Q40227) LIM3 protein precursor| Length = 90 Score = 29.6 bits (65), Expect = 4.7 Identities = 16/71 (22%), Positives = 34/71 (47%) Frame = +2 Query: 179 CNVDTGSMVRNCRTYCTVGSTEASPSSACCGAVRGGDFHRLCQYRSVLPNDIDANRAMQI 358 C+ G ++ +C Y G+ + +PS+ CC A++ + LC+ +++ + + Sbjct: 28 CSAAIGGLM-SCGPYVLPGN-QLTPSTQCCSAIQAVNHGCLCETINIISS---------L 76 Query: 359 PGKCGYGAANC 391 PG C +C Sbjct: 77 PGHCSLPPVSC 87 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,532,726 Number of Sequences: 219361 Number of extensions: 565922 Number of successful extensions: 1678 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 1651 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1670 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3523384522 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)