>WDR43_HUMAN (Q15061) WD-repeat protein 43|
          Length = 720

 Score = 32.3 bits (72), Expect = 0.65
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = -1

Query: 207 SVSLRASTRVSSGFAPLRHSSPSFGSRQACSNSNPSQKIRVGQRCGP*GPPARQLPCA 34
           ++ LR    V  G AP R  +P+ G  + CS +  +     G  C P  P    +PCA
Sbjct: 8   ALQLRDCACVGEGAAPPRAGAPAHGRTRGCSGARAAMAAGGGGSCDPLAPAG--VPCA 63

>TTC15_HUMAN (Q8WVT3) Tetratricopeptide repeat protein 15 (TPR repeat protein|
           15)
          Length = 735

 Score = 32.0 bits (71), Expect = 0.85
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = -1

Query: 216 ICTSVSLRASTRVSSGFAPLRHSSPSFGSRQACSNSNPSQKIR 88
           +CT  S RA      GF P    SPSFG     S   P Q ++
Sbjct: 159 VCTIFSQRAPPASGDGFEPQMVKSPSFGGASEASARTPPQVVQ 201

>GLI4_XENLA (Q91661) Zinc finger protein GLI4 (Neural-specific DNA-binding|
           protein xGLI4) (xGLI-4)
          Length = 1361

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
 Frame = -1

Query: 219 TICTSVSLRASTRVSSGFAPLRHSSPSFGSRQ--ACSNSNPS 100
           ++  ++S + S   S G  PL H SP+F SRQ  A +++NP+
Sbjct: 172 SLSAALSQQRSLSSSFGHTPLLHPSPTFASRQQGALTSANPA 213

>LPXD_BORPE (Q7VYC0) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase|
           (EC 2.3.1.-)
          Length = 363

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 20/51 (39%), Positives = 26/51 (50%)
 Frame = -2

Query: 155 GIVHHLSGPDRRAPTRTLHRRSGSASGAAREGLPLVSFLAHPRFQNPSTRT 3
           G+  HLS PD     R   R  G+ S A  E    +SFL++PR+QN    T
Sbjct: 24  GLDWHLSAPDAADLPRI--RGIGTLSSAGNEE---ISFLSNPRYQNQLATT 69

>LPXD_BORPA (Q7WA50) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase|
           (EC 2.3.1.-)
          Length = 363

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 20/51 (39%), Positives = 26/51 (50%)
 Frame = -2

Query: 155 GIVHHLSGPDRRAPTRTLHRRSGSASGAAREGLPLVSFLAHPRFQNPSTRT 3
           G+  HLS PD     R   R  G+ S A  E    +SFL++PR+QN    T
Sbjct: 24  GLDWHLSAPDAADLPRI--RGIGTLSSAGNEE---ISFLSNPRYQNQLATT 69

>LPXD_BORBR (Q7WJ84) UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase|
           (EC 2.3.1.-)
          Length = 363

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 20/51 (39%), Positives = 26/51 (50%)
 Frame = -2

Query: 155 GIVHHLSGPDRRAPTRTLHRRSGSASGAAREGLPLVSFLAHPRFQNPSTRT 3
           G+  HLS PD     R   R  G+ S A  E    +SFL++PR+QN    T
Sbjct: 24  GLDWHLSAPDAADLPRI--RGIGTLSSAGSEE---ISFLSNPRYQNQLATT 69

>Y309_HALSA (Q9HSB8) Putative aldolase Vng0309c (EC 4.2.1.-)|
          Length = 265

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -2

Query: 158 SGIVHHLSGPDRRAPTRTLHRRSGSASGAAREGLPLVSF 42
           +G + HL+      P +T  RR+G+   A R G   VSF
Sbjct: 71  AGYIVHLNASTTLGPDQTDKRRTGTVEDAVRAGADAVSF 109

>MED4_MOUSE (Q9CQA5) Mediator complex subunit 4 (Mediator of RNA polymerase II|
           transcription subunit 4)
          Length = 270

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = -3

Query: 289 GNFGGNQLLDGSIS--LSPLYPSQTNDLHVSIASSLHQSFLWLRP 161
           G+  G+ L  G +   L+P YP Q+ND+ V++    H S   L P
Sbjct: 200 GHLPGDALAAGRLPDVLAPQYPWQSNDMSVNMLPPNHSSDFLLEP 244

>INSM1_MOUSE (Q63ZV0) Insulinoma-associated protein 1 (Zinc finger protein IA-1)|
          Length = 521

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 18/52 (34%), Positives = 22/52 (42%)
 Frame = -2

Query: 212 ARQYRFEPPPEFPLASPRSGIVHHLSGPDRRAPTRTLHRRSGSASGAAREGL 57
           A Q +  PPP  P   P   I+   +GPD +AP       SG    A   GL
Sbjct: 398 ALQAKGAPPPPPPPPPPAEDILAFYAGPDEKAP----QEASGDGEAAGVLGL 445

>BRE1_YEAST (Q07457) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-) (Brefeldin|
           A-sensitivity protein 1)
          Length = 700

 Score = 28.5 bits (62), Expect = 9.4
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = +2

Query: 113 LEHACRDPKDGELCLSGAKPEETLVEARSDTDVQIV 220
           +E  C D  + +LC   A+ +ETL+  RSD+ ++++
Sbjct: 80  IETFCTDANEKQLCREIAQGDETLIVQRSDSFMKLL 115


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,318,986
Number of Sequences: 219361
Number of extensions: 1392360
Number of successful extensions: 3714
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3714
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)