| Clone Name | bast74b07 |
|---|---|
| Clone Library Name | barley_pub |
>RS11_MAIZE (P25460) 40S ribosomal protein S11| Length = 159 Score = 257 bits (657), Expect = 1e-68 Identities = 120/129 (93%), Positives = 126/129 (97%) Frame = +3 Query: 99 MAEQTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCP 278 MAEQTEK+FLKQPKVFLS+KK+ K K+PGK GNRFWKS+GLGFKTPREAIEGTYIDKKCP Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKKPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60 Query: 279 FTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 458 FTGTV+IRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE Sbjct: 61 FTGTVSIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 120 Query: 459 GDHVIIGQC 485 GDHVIIGQC Sbjct: 121 GDHVIIGQC 129
>RS11_EUPES (Q9M5M1) 40S ribosomal protein S11| Length = 159 Score = 254 bits (649), Expect = 8e-68 Identities = 116/129 (89%), Positives = 125/129 (96%) Frame = +3 Query: 99 MAEQTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCP 278 MAEQTEK+FLKQPKVFL++KK K KRPGK GNRFWKS+GLGFKTPREAI+GTYIDKKCP Sbjct: 1 MAEQTEKAFLKQPKVFLASKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIDGTYIDKKCP 60 Query: 279 FTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 458 FTGTV+IRGRI+AGTCHSAKMNRTIIVRRNYLHF+KKYQRYEKRHSNIPAH+SPCFRVKE Sbjct: 61 FTGTVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHVSPCFRVKE 120 Query: 459 GDHVIIGQC 485 GDHVIIGQC Sbjct: 121 GDHVIIGQC 129
>RS11_SOYBN (P17093) 40S ribosomal protein S11| Length = 159 Score = 253 bits (646), Expect = 2e-67 Identities = 118/129 (91%), Positives = 123/129 (95%) Frame = +3 Query: 99 MAEQTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCP 278 MAEQTEK+FLKQPKVFLSTKK K KRPGK GNRFWKS+GLGFKTPREAIEGTYIDKKCP Sbjct: 1 MAEQTEKAFLKQPKVFLSTKKTGKGKRPGKGGNRFWKSIGLGFKTPREAIEGTYIDKKCP 60 Query: 279 FTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 458 FTG V+IRGRI+AGTCHSAKMNRTIIVRRNYLHF+KKYQRYEKRHSNIPAHISP FRVKE Sbjct: 61 FTGNVSIRGRILAGTCHSAKMNRTIIVRRNYLHFIKKYQRYEKRHSNIPAHISPAFRVKE 120 Query: 459 GDHVIIGQC 485 GDHVIIGQC Sbjct: 121 GDHVIIGQC 129
>RS11A_ARATH (P16181) 40S ribosomal protein S11-1| Length = 160 Score = 248 bits (633), Expect = 6e-66 Identities = 112/129 (86%), Positives = 124/129 (96%) Frame = +3 Query: 99 MAEQTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCP 278 MAEQTEK+FLKQPKVFLS+KK+ K KRPGK GNRFWK++GLGFKTPREAI+G Y+DKKCP Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYVDKKCP 60 Query: 279 FTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 458 FTGTV+IRGRI+AGTCHSAKM RTIIVRR+YLHFVKKYQRYEKRHSNIPAH+SPCFRVKE Sbjct: 61 FTGTVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120 Query: 459 GDHVIIGQC 485 GDH+IIGQC Sbjct: 121 GDHIIIGQC 129
>RS11C_ARATH (P42733) 40S ribosomal protein S11-3| Length = 159 Score = 246 bits (627), Expect = 3e-65 Identities = 113/129 (87%), Positives = 122/129 (94%) Frame = +3 Query: 99 MAEQTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCP 278 MAEQTEK+FLKQPKVFLS+K + K KRPGK GNRFWK++GLGFKTPREAI+G YID KCP Sbjct: 1 MAEQTEKAFLKQPKVFLSSKISGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYIDSKCP 60 Query: 279 FTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 458 FTGTV+IRGRI+AGTCHSAKM RTIIVRRNYLHFVKKYQRYEKRHSNIPAH+SPCFRVKE Sbjct: 61 FTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120 Query: 459 GDHVIIGQC 485 GDHVIIGQC Sbjct: 121 GDHVIIGQC 129
>RS11B_ARATH (O65569) 40S ribosomal protein S11-2| Length = 159 Score = 243 bits (619), Expect = 3e-64 Identities = 111/129 (86%), Positives = 123/129 (95%) Frame = +3 Query: 99 MAEQTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCP 278 MAEQTEK+FLKQPKVFLS+KK+ K KRPGK GNRFWK++GLGFKTPREAIEGTYID+KCP Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIEGTYIDQKCP 60 Query: 279 FTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 458 FTGTV+IRGRI++GTCHSAKM RTIIVRR+YLHFVKKY+RYEKRHSNIPAH+SPCFRVKE Sbjct: 61 FTGTVSIRGRILSGTCHSAKMQRTIIVRRDYLHFVKKYRRYEKRHSNIPAHVSPCFRVKE 120 Query: 459 GDHVIIGQC 485 GD V IGQC Sbjct: 121 GDRVTIGQC 129
>RS11_DUNTE (P42756) 40S ribosomal protein S11| Length = 157 Score = 187 bits (474), Expect = 2e-47 Identities = 89/129 (68%), Positives = 107/129 (82%) Frame = +3 Query: 99 MAEQTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCP 278 MAEQTEK+F KQ V K +K K PGK+G+RF+K+VGL FKTP+EAI+G Y+DKKCP Sbjct: 1 MAEQTEKAFQKQVGVTGCFKSKEK-KAPGKSGHRFFKNVGLNFKTPKEAIDGNYVDKKCP 59 Query: 279 FTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKE 458 FTG V+IRGRI+ G S+KM RTIIVRR+YLHF+ KY RYEKRH+NIPAH+SPCFRV++ Sbjct: 60 FTGNVSIRGRILTGVVKSSKMMRTIIVRRDYLHFIPKYARYEKRHTNIPAHVSPCFRVRD 119 Query: 459 GDHVIIGQC 485 GD VIIGQC Sbjct: 120 GDTVIIGQC 128
>RS11_SCHPO (P79013) 40S ribosomal protein S11| Length = 152 Score = 163 bits (412), Expect = 3e-40 Identities = 76/126 (60%), Positives = 93/126 (73%) Frame = +3 Query: 108 QTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCPFTG 287 Q+E++F KQP +F + KK AG R++K VGLGFKTP EAI G Y+DKKCPF G Sbjct: 8 QSERAFQKQPHIFQNAKKG--------AGRRWYKDVGLGFKTPAEAIYGEYVDKKCPFVG 59 Query: 288 TVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDH 467 V+IRGRI+ GT S KM+RTII+RR YLHF+ KY RYEKRH N+ AH+SP FR+ EGD Sbjct: 60 QVSIRGRILTGTVVSTKMHRTIIIRREYLHFIPKYNRYEKRHKNLAAHVSPAFRINEGDV 119 Query: 468 VIIGQC 485 V +GQC Sbjct: 120 VTVGQC 125
>RS11_XENLA (P41115) 40S ribosomal protein S11| Length = 158 Score = 159 bits (402), Expect = 4e-39 Identities = 71/127 (55%), Positives = 99/127 (77%), Gaps = 1/127 (0%) Frame = +3 Query: 108 QTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCPFTG 287 QTE+++ KQP +F + K+ + + + R+++SVGLGFKTPREAI+GTYIDKKCPFTG Sbjct: 5 QTERAYQKQPTIFQNKKRVLEGETGKEKLPRYYRSVGLGFKTPREAIDGTYIDKKCPFTG 64 Query: 288 TVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGD 464 V+IRGRI++G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQVGD 124 Query: 465 HVIIGQC 485 V +G+C Sbjct: 125 TVTVGEC 131
>RS11_YEAST (P26781) 40S ribosomal protein S11 (S18) (YS12) (RP41)| Length = 155 Score = 158 bits (399), Expect = 8e-39 Identities = 72/126 (57%), Positives = 95/126 (75%) Frame = +3 Query: 108 QTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCPFTG 287 Q+E++F KQP +F + K + K R++K+ GLGFKTP+ AIEG+YIDKKCPFTG Sbjct: 7 QSERAFQKQPHIFNNPKV-----KTSKRTKRWYKNAGLGFKTPKTAIEGSYIDKKCPFTG 61 Query: 288 TVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDH 467 V+IRG+I+ GT S KM+RTI++RR YLH++ KY RYEKRH N+P H+SP FRV+ GD Sbjct: 62 LVSIRGKILTGTVVSTKMHRTIVIRRAYLHYIPKYNRYEKRHKNVPVHVSPAFRVQVGDI 121 Query: 468 VIIGQC 485 V +GQC Sbjct: 122 VTVGQC 127
>RS11_RAT (P62282) 40S ribosomal protein S11| Length = 158 Score = 157 bits (396), Expect = 2e-38 Identities = 70/127 (55%), Positives = 98/127 (77%), Gaps = 1/127 (0%) Frame = +3 Query: 108 QTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCPFTG 287 QTE+++ KQP +F + K+ + + R++K++GLGFKTP+EAIEGTYIDKKCPFTG Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64 Query: 288 TVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGD 464 V+IRGRI++G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGD 124 Query: 465 HVIIGQC 485 V +G+C Sbjct: 125 IVTVGEC 131
>RS11_MOUSE (P62281) 40S ribosomal protein S11| Length = 158 Score = 157 bits (396), Expect = 2e-38 Identities = 70/127 (55%), Positives = 98/127 (77%), Gaps = 1/127 (0%) Frame = +3 Query: 108 QTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCPFTG 287 QTE+++ KQP +F + K+ + + R++K++GLGFKTP+EAIEGTYIDKKCPFTG Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64 Query: 288 TVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGD 464 V+IRGRI++G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGD 124 Query: 465 HVIIGQC 485 V +G+C Sbjct: 125 IVTVGEC 131
>RS11_MACFA (P61270) 40S ribosomal protein S11| Length = 158 Score = 157 bits (396), Expect = 2e-38 Identities = 70/127 (55%), Positives = 98/127 (77%), Gaps = 1/127 (0%) Frame = +3 Query: 108 QTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCPFTG 287 QTE+++ KQP +F + K+ + + R++K++GLGFKTP+EAIEGTYIDKKCPFTG Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64 Query: 288 TVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGD 464 V+IRGRI++G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGD 124 Query: 465 HVIIGQC 485 V +G+C Sbjct: 125 IVTVGEC 131
>RS11_HUMAN (P62280) 40S ribosomal protein S11| Length = 158 Score = 157 bits (396), Expect = 2e-38 Identities = 70/127 (55%), Positives = 98/127 (77%), Gaps = 1/127 (0%) Frame = +3 Query: 108 QTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCPFTG 287 QTE+++ KQP +F + K+ + + R++K++GLGFKTP+EAIEGTYIDKKCPFTG Sbjct: 5 QTERAYQKQPTIFQNKKRVLLGETGKEKLPRYYKNIGLGFKTPKEAIEGTYIDKKCPFTG 64 Query: 288 TVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEGD 464 V+IRGRI++G KM RTI++RR+YLH+++KY R+EKRH N+ H+SPCFR V+ GD Sbjct: 65 NVSIRGRILSGVVTKMKMQRTIVIRRDYLHYIRKYNRFEKRHKNMSVHLSPCFRDVQIGD 124 Query: 465 HVIIGQC 485 V +G+C Sbjct: 125 IVTVGEC 131
>RS11_ANOGA (P52812) 40S ribosomal protein S11| Length = 151 Score = 120 bits (302), Expect = 1e-27 Identities = 62/128 (48%), Positives = 85/128 (66%), Gaps = 1/128 (0%) Frame = +3 Query: 105 EQTEKSFLKQPKVFLSTKKADKAKRPGKAGNRFWKSVGLGFKTPREAIEGTYIDKKCPFT 284 +Q ++F KQ + L+ K + K G R S+GLGFKTP+EAI GTYIDKKCPFT Sbjct: 4 QQNIRAFQKQLGINLNRKNVSRKK-----GLRMHHSIGLGFKTPKEAITGTYIDKKCPFT 58 Query: 285 GTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFR-VKEG 461 G ++IRGRI+ G K + +RR+YL F++KY +EKR+ N+ H+SPCFR V+ G Sbjct: 59 GHISIRGRILTGVVR--KCIVLLYIRRDYLQFIRKYDTFEKRNRNMRLHLSPCFRDVEAG 116 Query: 462 DHVIIGQC 485 D V +G+C Sbjct: 117 DIVTLGEC 124
>RS17_METBF (Q46GA4) 30S ribosomal protein S17P| Length = 109 Score = 90.9 bits (224), Expect = 2e-18 Identities = 41/93 (44%), Positives = 57/93 (61%) Frame = +3 Query: 207 KSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVK 386 + +GL P E +Y CPF GT+++RG+I+ GT S+KM+ T+++ R Y+ V Sbjct: 3 RDIGLNIPAPSEECNDSY----CPFHGTLSVRGQILVGTVVSSKMDNTVVIERQYMKLVP 58 Query: 387 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 485 KYQRYEKR S + AH PC K GD V I +C Sbjct: 59 KYQRYEKRRSKVHAHNPPCISAKVGDIVTIAEC 91
>RS17_METKA (Q8TW21) 30S ribosomal protein S17P| Length = 118 Score = 89.7 bits (221), Expect = 4e-18 Identities = 42/96 (43%), Positives = 58/96 (60%) Frame = +3 Query: 198 RFWKSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLH 377 R K +GLG K PR + D CPF G + +RG I+ G S +M++T+IV R Y Sbjct: 6 RMAKDIGLGVKPPRRECD----DPNCPFHGNLRVRGMILEGVVVSDRMDKTVIVEREYYR 61 Query: 378 FVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 485 + +KY+R+E+R S IPAH PC +EGD V I +C Sbjct: 62 YDRKYERWERRRSRIPAHNPPCIDAQEGDKVRIAEC 97
>RS17_METHJ (Q2FT32) 30S ribosomal protein S17P| Length = 108 Score = 89.4 bits (220), Expect = 5e-18 Identities = 42/93 (45%), Positives = 57/93 (61%) Frame = +3 Query: 207 KSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVK 386 + +GL P + D CPF GT+ +RG++I G S KM +++V+R+YLHFV+ Sbjct: 3 RDIGLNVPVPEKDCS----DVNCPFHGTLPVRGQVITGKVVSDKMTGSVVVQRDYLHFVR 58 Query: 387 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 485 KYQRYEKR S I AH PC + GD V I +C Sbjct: 59 KYQRYEKRSSKIHAHNPPCLHARVGDMVSIAEC 91
>RS17_METAC (Q8TRT8) 30S ribosomal protein S17P| Length = 109 Score = 88.2 bits (217), Expect = 1e-17 Identities = 41/93 (44%), Positives = 55/93 (59%) Frame = +3 Query: 207 KSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVK 386 + +GL P E + Y CPF GT+ +RG+I+ GT S+KM+ T+++ R Y+ V Sbjct: 3 RDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKMVS 58 Query: 387 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 485 KYQRYEKR S I AH C K GD V I +C Sbjct: 59 KYQRYEKRRSKIHAHNPACISAKVGDIVTIAEC 91
>RS17_METMA (Q8PV41) 30S ribosomal protein S17P| Length = 109 Score = 87.0 bits (214), Expect = 2e-17 Identities = 41/93 (44%), Positives = 55/93 (59%) Frame = +3 Query: 207 KSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVK 386 + +GL P E + Y CPF GT+ +RG+I+ GT S+KM+ T+++ R Y+ V Sbjct: 3 RDIGLNIPAPSEECDDAY----CPFHGTLPVRGQILVGTVVSSKMDNTVVIERQYMKMVS 58 Query: 387 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 485 KYQRYEKR S I AH C K GD V I +C Sbjct: 59 KYQRYEKRRSKIHAHNPACISAKVGDIVTIVEC 91
>RS17_METST (Q2NFW6) 30S ribosomal protein S17P| Length = 106 Score = 80.5 bits (197), Expect = 2e-15 Identities = 39/91 (42%), Positives = 55/91 (60%) Frame = +3 Query: 213 VGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKY 392 VG+ K P + D CPF G +++RG++I GT S K +RTI V R++ ++ K+ Sbjct: 2 VGINVKQPEKECH----DPNCPFHGELSVRGQVIEGTVTSDKADRTITVERSFYKYINKF 57 Query: 393 QRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 485 +RYEKR+S I AH C VK GD V I +C Sbjct: 58 ERYEKRNSKIKAHKPDCLDVKVGDSVKIAEC 88
>RS17_HALSA (O24786) 30S ribosomal protein S17P (HHAS17)| Length = 109 Score = 80.1 bits (196), Expect = 3e-15 Identities = 38/91 (41%), Positives = 53/91 (58%) Frame = +3 Query: 210 SVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKK 389 ++GL P EGT D+ CPF G +++RG+++ G S M +T++V R Y FV K Sbjct: 2 AIGLNVTEP----EGTCSDEDCPFHGNLSVRGQVLEGEVASTDMEKTVVVEREYDVFVPK 57 Query: 390 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQ 482 Y RY KR S +PAH CF + GD V I + Sbjct: 58 YDRYMKRRSRVPAHAPECFDISVGDTVSIAE 88
>RS17_PYRHO (O59426) 30S ribosomal protein S17P| Length = 116 Score = 79.0 bits (193), Expect = 6e-15 Identities = 38/92 (41%), Positives = 52/92 (56%) Frame = +3 Query: 207 KSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVK 386 + +GL + P E + D KCP+ G + I GR+ G S K +T+ V R Y H++K Sbjct: 6 RDIGLRIQPPAEKCD----DPKCPWHGHLKIHGRVFEGIVISDKPRKTVTVERQYYHYLK 61 Query: 387 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQ 482 KY+RYE R S I AH PC K GD V+I + Sbjct: 62 KYERYELRRSRIHAHNPPCINAKVGDRVLIAE 93
>RS17_PYRAB (Q9V1U5) 30S ribosomal protein S17P| Length = 116 Score = 79.0 bits (193), Expect = 6e-15 Identities = 38/92 (41%), Positives = 52/92 (56%) Frame = +3 Query: 207 KSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVK 386 + +GL + P E + D KCP+ G + I GR+ G S K +T+ V R Y H++K Sbjct: 6 RDIGLRIQPPAEKCD----DPKCPWHGHLKIHGRVFEGIVVSDKPRKTVTVERQYYHYLK 61 Query: 387 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQ 482 KY+RYE R S I AH PC K GD V+I + Sbjct: 62 KYERYELRRSRIHAHNPPCINAKVGDRVLIAE 93
>RS17_SULAC (Q4JB49) 30S ribosomal protein S17P| Length = 114 Score = 78.6 bits (192), Expect = 8e-15 Identities = 42/101 (41%), Positives = 60/101 (59%), Gaps = 1/101 (0%) Frame = +3 Query: 183 GKAGNRFWKSVGL-GFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIV 359 GK G + K+VG+ G P + + Y CP+ G++ +RG ++ G A+ NRT V Sbjct: 2 GKKG-QLVKNVGIEGVSAPSKTCDDEY----CPYHGSLKVRGIVLEGKLIRARANRTGTV 56 Query: 360 RRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQ 482 R Y+ + KY+RYE+R S I HI C VKEGD+VIIG+ Sbjct: 57 EREYIFYDSKYKRYERRRSRIHVHIPSCLEVKEGDNVIIGE 97
>RS17_PICTO (Q6L1B8) 30S ribosomal protein S17P| Length = 106 Score = 78.6 bits (192), Expect = 8e-15 Identities = 39/93 (41%), Positives = 55/93 (59%) Frame = +3 Query: 207 KSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVK 386 +++G+ K P E T D KCPF G + I G+II GT S KMN +I+++R +K Sbjct: 2 ENIGIDVKKP----ERTCNDPKCPFHGNLRIHGQIIVGTVVSTKMNGSIVLKRESRRLIK 57 Query: 387 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 485 KY+RYE + S AH+ C V+ GD V I +C Sbjct: 58 KYERYETKISKFHAHLPGCIDVRPGDRVKIAEC 90
>RS17_SULTO (Q975I9) 30S ribosomal protein S17P| Length = 116 Score = 77.4 bits (189), Expect = 2e-14 Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 1/94 (1%) Frame = +3 Query: 207 KSVGL-GFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFV 383 K++G+ G P + + D CPF G + +RG I+ G + +T +V R+YL + Sbjct: 12 KNIGIEGVNPPSKTCD----DINCPFHGNLRVRGIILEGRLIRYRAEKTGVVERDYLFYD 67 Query: 384 KKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 485 KY+RYE+R S I HI PC VKEGD+VII +C Sbjct: 68 TKYKRYERRRSRIHVHIPPCLDVKEGDNVIIAEC 101
>RS17_SULSO (Q9UX98) 30S ribosomal protein S17P| Length = 114 Score = 77.4 bits (189), Expect = 2e-14 Identities = 31/74 (41%), Positives = 48/74 (64%) Frame = +3 Query: 264 DKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 443 D+ CP+ G++ +RG + G + + ++ R YL++ KY+RYE+R S I AH+ PC Sbjct: 25 DEDCPYHGSLRVRGITLEGVIVKYRGTKAAVIERQYLYYDSKYKRYERRRSRIHAHVPPC 84 Query: 444 FRVKEGDHVIIGQC 485 V+EGD VIIG+C Sbjct: 85 INVREGDKVIIGEC 98
>RS17_METTH (O26120) 30S ribosomal protein S17P| Length = 106 Score = 76.6 bits (187), Expect = 3e-14 Identities = 35/74 (47%), Positives = 47/74 (63%) Frame = +3 Query: 264 DKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 443 D CPF G + +RG+I+ GT S K RT+ V R++ F++KY+RYEKR S I AH C Sbjct: 15 DPNCPFHGDLPLRGQILEGTVVSDKAERTVTVERSFYKFIRKYERYEKRKSKIKAHKPDC 74 Query: 444 FRVKEGDHVIIGQC 485 V+ GD V I +C Sbjct: 75 IDVRVGDTVKIAEC 88
>RS17_METVA (P14042) 30S ribosomal protein S17P| Length = 109 Score = 75.9 bits (185), Expect = 5e-14 Identities = 34/92 (36%), Positives = 53/92 (57%) Frame = +3 Query: 210 SVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKK 389 ++G+ K P E D CPF GT+++RG+I G K + TI+++R ++ K Sbjct: 3 NIGIDVKAPENVCE----DVNCPFHGTLSVRGQIFEGVVSGDKGHNTIVIKREVTGYISK 58 Query: 390 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 485 Y+RYEKR +++ AH PC K GD V + +C Sbjct: 59 YERYEKRTTSLVAHNPPCINAKTGDVVKVMEC 90
>RS17_PYRKO (Q5JDH9) 30S ribosomal protein S17P| Length = 114 Score = 75.5 bits (184), Expect = 7e-14 Identities = 36/92 (39%), Positives = 51/92 (55%) Frame = +3 Query: 207 KSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVK 386 + +GL + P E D KCP+ G + I GR + G S K +T++V R Y H++K Sbjct: 2 REIGLRVQPPAEVCN----DPKCPWHGNLKIHGRYVEGIVVSDKGKKTVVVERQYYHYLK 57 Query: 387 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQ 482 KY+RYE R S + AH C K GD V+I + Sbjct: 58 KYERYELRKSKVHAHNPECINAKVGDKVLIAE 89
>RS17_AERPE (Q9YF81) 30S ribosomal protein S17P| Length = 120 Score = 74.7 bits (182), Expect = 1e-13 Identities = 32/73 (43%), Positives = 47/73 (64%) Frame = +3 Query: 264 DKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 443 D CP+ GT+ +RG ++ G A+ R ++V+ YL++ KKY RYE+R I AH+ C Sbjct: 30 DPNCPWHGTLRVRGVLLEGVVAKARARRMVVVQHVYLYYDKKYNRYERRSKKIHAHLPDC 89 Query: 444 FRVKEGDHVIIGQ 482 VKEGD V+IG+ Sbjct: 90 ISVKEGDVVVIGE 102
>RS17_METJA (P54036) 30S ribosomal protein S17P| Length = 117 Score = 74.3 bits (181), Expect = 2e-13 Identities = 32/93 (34%), Positives = 55/93 (59%) Frame = +3 Query: 207 KSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVK 386 +++G+ K P + DK CPF G + +RG+ G S K ++T+I++R + ++K Sbjct: 4 RNIGIQVKAPEVECD----DKNCPFHGNLPVRGQSFVGVVVSDKPHKTVIIKREVVKYIK 59 Query: 387 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 485 KY+RYE+R + + AH PC + GD V + +C Sbjct: 60 KYERYERRTTKLAAHNPPCIHARVGDIVRVMEC 92
>RS17_METMP (Q6LXE4) 30S ribosomal protein S17P| Length = 109 Score = 73.9 bits (180), Expect = 2e-13 Identities = 34/92 (36%), Positives = 54/92 (58%) Frame = +3 Query: 210 SVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKK 389 ++G+ K P E D CPF GT+++RG+I G S K + TI+++R ++ K Sbjct: 3 NIGIDVKAPENVCE----DPNCPFHGTLSVRGQIFEGIVTSDKGHDTIVIKREVTGYISK 58 Query: 390 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 485 Y+RYEKR +++ AH C + K GD V + +C Sbjct: 59 YERYEKRTTSLVAHNPACIKAKVGDTVKVMEC 90
>RS17_PYRFU (Q8U008) 30S ribosomal protein S17P| Length = 113 Score = 73.6 bits (179), Expect = 3e-13 Identities = 36/92 (39%), Positives = 50/92 (54%) Frame = +3 Query: 207 KSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVK 386 + +GL + P E + D KCP+ G + I GR+ G S K +T+ V R Y ++ Sbjct: 3 RDIGLRVQPPAEKCD----DPKCPWHGNLKIHGRVFEGIVVSDKPRKTVTVERQYYFYLN 58 Query: 387 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQ 482 KY+RYE R S I AH PC K GD V+I + Sbjct: 59 KYERYELRRSKIHAHNPPCINAKVGDKVLIAE 90
>RS17_HALMA (P12741) 30S ribosomal protein S17P (HmaS17) (HS14)| Length = 111 Score = 71.6 bits (174), Expect = 1e-12 Identities = 35/92 (38%), Positives = 51/92 (55%) Frame = +3 Query: 210 SVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKK 389 ++GL + P E T D+ CPF G +++RG+ + G S M +T++V R Y V K Sbjct: 1 ALGLNVQEPEE----TCADQNCPFHGELSVRGQTLNGEVASTDMEKTVVVEREYDVKVPK 56 Query: 390 YQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 485 Y R+ KR S +PAH C + GD V I +C Sbjct: 57 YDRFMKRRSRVPAHAPDCLDLAVGDTVTIAEC 88
>RS17_ARCFU (O28363) 30S ribosomal protein S17P| Length = 111 Score = 68.2 bits (165), Expect = 1e-11 Identities = 31/93 (33%), Positives = 52/93 (55%) Frame = +3 Query: 207 KSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVK 386 + +G+ K P E D+ CPF GT+++RG+++ G +T ++ R + +V Sbjct: 2 RDIGIDVKPPERECE----DENCPFHGTLSVRGQLLRGKVVKV-YGKTAVIERELIRYVP 56 Query: 387 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 485 K++RY K+ S + AH C R + GD V IG+C Sbjct: 57 KFERYMKKRSKLHAHNPRCIRARPGDIVTIGEC 89
>RS17_THEAC (Q9HIR8) 30S ribosomal protein S17P| Length = 109 Score = 64.3 bits (155), Expect = 2e-10 Identities = 28/95 (29%), Positives = 50/95 (52%) Frame = +3 Query: 201 FWKSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHF 380 + +++GL K P E D CP+ G +++RG+++ G SA M ++ +V R Y + Sbjct: 2 YTRNIGLDVKLP----ESECNDPHCPYHGKLSVRGQVLTGKVVSANMTKSAVVAREYQQY 57 Query: 381 VKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 485 + KY+R + H+ C ++K GD V +C Sbjct: 58 IPKYERKATKIKKYHVHVPDCIKIKPGDTVRFAEC 92
>RS17_THEVO (Q97BW7) 30S ribosomal protein S17P| Length = 109 Score = 60.8 bits (146), Expect = 2e-09 Identities = 27/93 (29%), Positives = 46/93 (49%) Frame = +3 Query: 207 KSVGLGFKTPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVK 386 +++GL P E D CPF G + +RG+++ G S M R+++V R Y ++ Sbjct: 4 RNIGLDVSVP----EKECTDPHCPFHGNLPVRGQVLTGKVISTAMTRSVVVAREYQQYIP 59 Query: 387 KYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 485 KY+R + H+ C ++ GD V +C Sbjct: 60 KYERKATKIKKYHVHVPDCIELRVGDTVRFAEC 92
>RS17_PYRAE (Q8ZWL3) 30S ribosomal protein S17P| Length = 123 Score = 60.5 bits (145), Expect = 2e-09 Identities = 24/73 (32%), Positives = 42/73 (57%) Frame = +3 Query: 264 DKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 443 D CP+ G + +R +++ T +M++ +V +LH+++KY RYE+R + + C Sbjct: 20 DPLCPWHGHLKVRLKLLEVTVEKVRMHKAAVVIHEWLHYIRKYNRYERRRKRMRVRVPEC 79 Query: 444 FRVKEGDHVIIGQ 482 VK GD VII + Sbjct: 80 IEVKPGDKVIIAE 92
>RS17_NANEQ (Q74NJ4) 30S ribosomal protein S17P| Length = 113 Score = 57.8 bits (138), Expect = 2e-08 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 1/74 (1%) Frame = +3 Query: 264 DKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPC 443 DKKCP G + +RG G N+T+ + +++ KY+RYE R + I A++ C Sbjct: 16 DKKCPHHGHLKVRGFFFKGKVIKKSDNKTVKIEIIRYYWLPKYERYELRRTRITAYLPEC 75 Query: 444 FR-VKEGDHVIIGQ 482 + +KEGD+V+IG+ Sbjct: 76 LKDIKEGDYVLIGE 89
>RS17_COXBU (Q83ER7) 30S ribosomal protein S17| Length = 89 Score = 30.4 bits (67), Expect = 2.6 Identities = 22/60 (36%), Positives = 30/60 (50%) Frame = +3 Query: 306 RIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVIIGQC 485 R + GT S KMN T++VR KY ++ KR + I AH + GD V I +C Sbjct: 9 RSLMGTVVSNKMNDTVVVRVERRVKHPKYGKFIKRSTKIHAH-DKGNEGQIGDIVTIREC 67
>PROL_ARATH (P43299) PROLIFERA protein| Length = 716 Score = 30.4 bits (67), Expect = 2.6 Identities = 18/58 (31%), Positives = 28/58 (48%) Frame = +3 Query: 231 TPREAIEGTYIDKKCPFTGTVAIRGRIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYE 404 +P + +E + I P+TG A+R ++A T A + HF KKY+ YE Sbjct: 260 SPGDVVEFSGIFLPIPYTGFKALRAGLVADTYLEAT---------SVTHFKKKYEEYE 308
>KR122_HUMAN (P59991) Keratin-associated protein 12-2 (Keratin-associated| protein 12.2) (High sulfur keratin-associated protein 12.2) Length = 146 Score = 29.3 bits (64), Expect = 5.8 Identities = 13/21 (61%), Positives = 14/21 (66%), Gaps = 1/21 (4%) Frame = -2 Query: 210 SSRSGCQP-CRASLPCQPSWC 151 S SGCQP C A PCQP+ C Sbjct: 5 SCSSGCQPACCAPSPCQPACC 25
>RS17_SYNAS (Q2LQB1) 30S ribosomal protein S17| Length = 85 Score = 28.9 bits (63), Expect = 7.6 Identities = 18/57 (31%), Positives = 27/57 (47%) Frame = +3 Query: 306 RIIAGTCHSAKMNRTIIVRRNYLHFVKKYQRYEKRHSNIPAHISPCFRVKEGDHVII 476 R I G S KM++TI++R L + +Y ++H H K GD VI+ Sbjct: 8 RTIKGVVVSNKMDKTIVIRAERLVKHPVFHKYTRKHVKYMVH-DEKNECKVGDTVIV 63 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 56,827,158 Number of Sequences: 219361 Number of extensions: 1107055 Number of successful extensions: 3536 Number of sequences better than 10.0: 45 Number of HSP's better than 10.0 without gapping: 3397 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3527 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)