ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast74b06 |
|---|---|
| Clone Library Name | barley_pub |
>C74A2_ORYSA (Q7XYS3) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase| 2) (Hydroperoxide dehydrase 2) Length = 478 Score = 197 bits (501), Expect = 1e-50 Identities = 91/105 (86%), Positives = 101/105 (96%) Frame = +2 Query: 158 REVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPFMARDPRVV 337 R VPGSYG+PFVSA+RDRLDFYY QGQDKYFESR E+YGSTVVRINVPPGPFMARDPRVV Sbjct: 10 RPVPGSYGVPFVSAVRDRLDFYYLQGQDKYFESRAERYGSTVVRINVPPGPFMARDPRVV 69 Query: 338 AVLDAKSFPVLFDVTKVEKKNLFTGTYMPSTSLTGGFRVCSYLDP 472 A+LDAKSFPVLFDV KVEK+++FTGT+MPSTSLTGG+RVC+YLDP Sbjct: 70 ALLDAKSFPVLFDVAKVEKRDVFTGTFMPSTSLTGGYRVCAYLDP 114
>CP74_LINUS (P48417) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase) (Hydroperoxide dehydrase) Length = 536 Score = 166 bits (419), Expect = 4e-41 Identities = 74/113 (65%), Positives = 98/113 (86%) Frame = +2 Query: 134 SDEGSLVPREVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPF 313 SDE +L R++PG YGLP + I+DRLD++Y QG++++F+SR++KY STV R N+PPGPF Sbjct: 65 SDETTLPIRQIPGDYGLPGIGPIQDRLDYFYNQGREEFFKSRLQKYKSTVYRANMPPGPF 124 Query: 314 MARDPRVVAVLDAKSFPVLFDVTKVEKKNLFTGTYMPSTSLTGGFRVCSYLDP 472 +A +PRV+ +LDAKSFPVLFD++KVEKK+LFTGTYMPST LTGG+R+ SYLDP Sbjct: 125 IASNPRVIVLLDAKSFPVLFDMSKVEKKDLFTGTYMPSTELTGGYRILSYLDP 177
>CP74A_ARATH (Q96242) Cytochrome P450 74A, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase) (Hydroperoxide dehydrase) Length = 518 Score = 159 bits (401), Expect = 4e-39 Identities = 72/114 (63%), Positives = 92/114 (80%) Frame = +2 Query: 131 RSDEGSLVPREVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGP 310 R+ L R +PG+YGLP V I+DR D++Y QG +++F+SR+ KY STV R+N+PPG Sbjct: 46 RTGSKDLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGA 105 Query: 311 FMARDPRVVAVLDAKSFPVLFDVTKVEKKNLFTGTYMPSTSLTGGFRVCSYLDP 472 F+A +P+VVA+LD KSFPVLFDV KVEKK+LFTGTYMPST LTGG+R+ SYLDP Sbjct: 106 FIAENPQVVALLDGKSFPVLFDVDKVEKKDLFTGTYMPSTELTGGYRILSYLDP 159
>C74A2_PARAR (Q40778) Cytochrome P450 74A2 (EC 4.2.1.92) (Allene oxide synthase)| (Rubber particle protein) (RPP) Length = 473 Score = 156 bits (395), Expect = 2e-38 Identities = 72/113 (63%), Positives = 93/113 (82%), Gaps = 1/113 (0%) Frame = +2 Query: 137 DEGSLVPREVPGSYGLPFVSAIRDRLDFYYFQG-QDKYFESRVEKYGSTVVRINVPPGPF 313 D S RE+PGSYG+PF I+DRL+++Y G +D+YF SR++KY STV R N+PPGPF Sbjct: 2 DPSSKPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPF 61 Query: 314 MARDPRVVAVLDAKSFPVLFDVTKVEKKNLFTGTYMPSTSLTGGFRVCSYLDP 472 ++ +P+V+ +LDAKSFP+LFDV+KVEKK+LFTGTYMPST LTG +RV SYLDP Sbjct: 62 VSSNPKVIVLLDAKSFPILFDVSKVEKKDLFTGTYMPSTKLTGAYRVLSYLDP 114
>C74A1_ORYSA (Q7Y0C8) Cytochrome P450 74A1, chloroplast precursor (EC 4.2.1.92)| (Allene oxide synthase 1) (Hydroperoxide dehydrase 1) Length = 512 Score = 146 bits (368), Expect = 3e-35 Identities = 70/106 (66%), Positives = 87/106 (82%), Gaps = 1/106 (0%) Frame = +2 Query: 158 REVPGSYGLPFVSAIRDRLDFYYFQG-QDKYFESRVEKYGSTVVRINVPPGPFMARDPRV 334 R+VPG YG P V AIRDR +++Y G +D +F +RV + STVVR+N+PPGPF+ARDPRV Sbjct: 48 RKVPGDYGPPVVGAIRDRYEYFYGPGGRDGFFAARVRAHRSTVVRLNMPPGPFVARDPRV 107 Query: 335 VAVLDAKSFPVLFDVTKVEKKNLFTGTYMPSTSLTGGFRVCSYLDP 472 VA+LDA SFPVLFD + V+K +LFTGT+MPST LTGG+RV SYLDP Sbjct: 108 VALLDAASFPVLFDTSLVDKTDLFTGTFMPSTDLTGGYRVLSYLDP 153
>C74A4_ORYSA (Q6Z6K9) Cytochrome P450 74A4 (EC 4.2.1.92) (Allene oxide synthase| 4) (Hydroperoxide dehydrase 4) Length = 510 Score = 139 bits (349), Expect = 5e-33 Identities = 64/117 (54%), Positives = 90/117 (76%), Gaps = 1/117 (0%) Frame = +2 Query: 122 GMARSDEGSLVPREVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYG-STVVRINV 298 G ++ L+ RE+PG YG+PF+S +RDRLD+YYFQG D++F SRV ++G +TV+R+N+ Sbjct: 18 GQSKLSPSGLLIREIPGGYGVPFLSPLRDRLDYYYFQGADEFFRSRVARHGGATVLRVNM 77 Query: 299 PPGPFMARDPRVVAVLDAKSFPVLFDVTKVEKKNLFTGTYMPSTSLTGGFRVCSYLD 469 PPGPF+A DPRVVA+LDA+SF VL D + V+K + GT+MPS +L GG R ++LD Sbjct: 78 PPGPFLAGDPRVVALLDARSFRVLLDDSMVDKADTLDGTFMPSLALFGGHRPLAFLD 134
>C74A3_ORYSA (Q6Z6L1) Cytochrome P450 74A3 (EC 4.2.1.92) (Allene oxide synthase| 3) (Hydroperoxide dehydrase 3) Length = 500 Score = 131 bits (330), Expect = 8e-31 Identities = 60/105 (57%), Positives = 84/105 (80%), Gaps = 1/105 (0%) Frame = +2 Query: 158 REVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYG-STVVRINVPPGPFMARDPRV 334 RE+PG YG+PF S +RDRLD++YFQG ++YF SRV ++G +TV+R+N+PPGPF++ +PRV Sbjct: 30 REIPGGYGVPFFSPLRDRLDYFYFQGAEEYFRSRVARHGGATVLRVNMPPGPFISGNPRV 89 Query: 335 VAVLDAKSFPVLFDVTKVEKKNLFTGTYMPSTSLTGGFRVCSYLD 469 VA+LDA+SF VL D + V+K + GTYMPS +L GG R ++LD Sbjct: 90 VALLDARSFRVLLDDSMVDKADTLDGTYMPSRALFGGHRPLAFLD 134
>TRPC_XANCP (Q8PD70) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)| Length = 265 Score = 32.3 bits (72), Expect = 0.63 Identities = 17/61 (27%), Positives = 27/61 (44%) Frame = +2 Query: 155 PREVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPFMARDPRV 334 P ++ SY S + D Y+FQG D Y + E V+R + P+ + RV Sbjct: 76 PADIAVSYEFGGASCLSVLTDMYFFQGSDAYLQQAREACTLPVLRKDFTVDPYQVYEARV 135 Query: 335 V 337 + Sbjct: 136 L 136
>CP131_DROME (Q9VFJ0) Probable cytochrome P450 313a1 (EC 1.14.-.-)| (CYPCCCXIIIA1) Length = 492 Score = 30.4 bits (67), Expect = 2.4 Identities = 17/59 (28%), Positives = 31/59 (52%) Frame = +2 Query: 161 EVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPFMARDPRVV 337 ++PG GLP + + + + Y + + + + KYGST++ P + RDP+VV Sbjct: 31 KIPGPIGLPILGSSLENIITY--KRKLSFRTKYLNKYGSTILTWMGPVPFIVTRDPKVV 87
>CTLA4_CANFA (Q9XSI1) Cytotoxic T-lymphocyte protein 4 precursor (Cytotoxic| T-lymphocyte-associated antigen 4) (CTLA-4) (CD152 antigen) Length = 223 Score = 30.0 bits (66), Expect = 3.1 Identities = 15/45 (33%), Positives = 21/45 (46%) Frame = -2 Query: 399 FFFSTLVTSKSTGKLLASSTATTRGSRAMKGPGGTLMRTTVEPYF 265 FF+S L+T+ S K+L + T G P G +PYF Sbjct: 175 FFYSFLITAVSLSKMLKKRSPLTTGVYVKMPPTGPECEKQFQPYF 219
>SPC34_SCHPO (O14285) DASH complex subunit spc34 (Outer kinetochore protein| spc34) Length = 164 Score = 30.0 bits (66), Expect = 3.1 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +2 Query: 188 FVSAIRDRLDFYYFQGQDKYFESRVEKY 271 +V+ I + LD Y QG +Y E+ VEKY Sbjct: 75 YVACIEELLDIYPMQGGREYLETLVEKY 102
>GBRB3_DROME (Q08832) Gamma-aminobutyric-acid receptor beta-like subunit| precursor (GABA(A) receptor) Length = 496 Score = 29.6 bits (65), Expect = 4.1 Identities = 20/82 (24%), Positives = 35/82 (42%) Frame = +2 Query: 173 SYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPFMARDPRVVAVLDA 352 +YG+ F + + +D +Y+ + +E YG TV + + P R V + Sbjct: 165 TYGMRFTTTLACMMDLHYYPLDSQNCTVEIESYGYTVSDVVMYWKPTPVRG---VEDAEL 221 Query: 353 KSFPVLFDVTKVEKKNLFTGTY 418 F ++ T K+ L TG Y Sbjct: 222 PQFTIIGYETNDRKERLATGVY 243
>C90A1_ARATH (Q42569) Cytochrome P450 90A1 (EC 1.14.-.-)| Length = 472 Score = 29.6 bits (65), Expect = 4.1 Identities = 12/37 (32%), Positives = 19/37 (51%) Frame = +2 Query: 167 PGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGS 277 PGS GLP + + Y + + + + RV +YGS Sbjct: 33 PGSLGLPLIGETFQLIGAYKTENPEPFIDERVARYGS 69
>RRMJ_METMA (Q8PUP4) Ribosomal RNA large subunit methyltransferase J (EC| 2.1.1.-) (rRNA (uridine-2'-O-)-methyltransferase) (23S rRNA m2U2552 methyltransferase) Length = 268 Score = 28.5 bits (62), Expect = 9.1 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 13/51 (25%) Frame = +2 Query: 203 RDRLDFYYFQGQDKYFESR-------------VEKYGSTVVRINVPPGPFM 316 RDR D+YY Q +++ + SR V K G +VV + PG ++ Sbjct: 3 RDRRDYYYHQAKEEGYRSRASFKLKQINEKHNVIKRGDSVVDLGAAPGGWL 53
>RRMJ_METAC (Q8TR92) Ribosomal RNA large subunit methyltransferase J (EC| 2.1.1.-) (rRNA (uridine-2'-O-)-methyltransferase) (23S rRNA m2U2552 methyltransferase) Length = 272 Score = 28.5 bits (62), Expect = 9.1 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 13/51 (25%) Frame = +2 Query: 203 RDRLDFYYFQGQDKYFESR-------------VEKYGSTVVRINVPPGPFM 316 RDR D+YY Q +++ + SR V K G +VV + PG ++ Sbjct: 3 RDRRDYYYHQAKEEGYRSRASFKLKQINEKHNVIKRGDSVVDLGAAPGGWL 53
>TRPC_XYLFT (Q87EX2) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)| Length = 264 Score = 28.5 bits (62), Expect = 9.1 Identities = 16/61 (26%), Positives = 27/61 (44%) Frame = +2 Query: 155 PREVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPFMARDPRV 334 P E+ SY L S + D ++F+G D Y + V+R + P+ + RV Sbjct: 76 PAEIAISYELGGASCLSVLTDVHFFKGHDDYLSQARDACTLPVLRKDFTIDPYQVYEARV 135 Query: 335 V 337 + Sbjct: 136 L 136
>TRPC_XYLFA (Q9PGT5) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)| Length = 264 Score = 28.5 bits (62), Expect = 9.1 Identities = 16/61 (26%), Positives = 27/61 (44%) Frame = +2 Query: 155 PREVPGSYGLPFVSAIRDRLDFYYFQGQDKYFESRVEKYGSTVVRINVPPGPFMARDPRV 334 P E+ SY L S + D ++F+G D Y + V+R + P+ + RV Sbjct: 76 PAEIAISYELGGASCLSVLTDVHFFKGHDDYLSQARDACTLPVLRKDFTIDPYQVYEARV 135 Query: 335 V 337 + Sbjct: 136 L 136 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,670,708 Number of Sequences: 219361 Number of extensions: 604264 Number of successful extensions: 2035 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 1998 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2027 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
