ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast74b04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 234 2e-58
2dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic D... 234 2e-58
3dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic D... 234 2e-58
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 186 5e-44
5gb|AC125784.1| Genomic sequence for Oryza sativa, Nipponbare str... 186 5e-44
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 186 5e-44
7ref|XM_479295.1| Oryza sativa (japonica cultivar-group), mRNA 58 3e-05
8dbj|AK100810.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 3e-05
9gb|AC135957.3| Oryza sativa (japonica cultivar-group) chromosome... 54 5e-04
10gb|AC139171.3| Oryza sativa (japonica cultivar-group) chromosome... 54 5e-04
11dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
12gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 54 5e-04
13emb|AL035089.21|HS1030M6 Human DNA sequence from clone RP5-1030M... 44 0.43
14gb|AC123609.11| Mus musculus chromosome 3, clone RP23-281B17, co... 42 1.7
15ref|XM_424682.1| PREDICTED: Gallus gallus similar to AIEBP (LOC4... 42 1.7
16ref|NM_001012514.1| Homo sapiens integral membrane protein 2C (I... 42 1.7
17ref|NM_030926.4| Homo sapiens integral membrane protein 2C (ITM2... 42 1.7
18ref|NM_001012516.1| Homo sapiens integral membrane protein 2C (I... 42 1.7
19gb|BC098563.1| Homo sapiens integral membrane protein 2C, transc... 42 1.7
20emb|BX248356.1| Corynebacterium diphtheriae gravis NCTC13129, co... 42 1.7
21emb|AL606464.11| Mouse DNA sequence from clone RP23-462P2 on chr... 42 1.7
22emb|AL713651.1|HSM802978 Homo sapiens mRNA; cDNA DKFZp586H032 (f... 42 1.7
23emb|AL136603.1|HSM800007 Homo sapiens mRNA; cDNA DKFZp564L1216 (... 42 1.7
24emb|CR926115.1| Pongo pygmaeus mRNA; cDNA DKFZp459I1810 (from cl... 42 1.7
25emb|CR926009.1| Pongo pygmaeus mRNA; cDNA DKFZp459D0320 (from cl... 42 1.7
26emb|CR619124.1| full-length cDNA clone CS0DA002YM06 of Neuroblas... 42 1.7
27emb|CR615397.1| full-length cDNA clone CS0DE011YB13 of Placenta ... 42 1.7
28emb|CR613799.1| full-length cDNA clone CS0DA009YM18 of Neuroblas... 42 1.7
29emb|CR611572.1| full-length cDNA clone CS0DI012YE24 of Placenta ... 42 1.7
30emb|CR604981.1| full-length cDNA clone CS0DD008YL04 of Neuroblas... 42 1.7
31emb|CR603208.1| full-length cDNA clone CS0DI034YM09 of Placenta ... 42 1.7
32emb|CR600725.1| full-length cDNA clone CS0DE004YB20 of Placenta ... 42 1.7
33emb|CR600331.1| full-length cDNA clone CS0DN005YE15 of Adult bra... 42 1.7
34dbj|AK075361.1| Homo sapiens cDNA PSEC0047 fis, clone NT2RP10010... 42 1.7
35emb|CR598205.1| full-length cDNA clone CS0DI074YI14 of Placenta ... 42 1.7
36dbj|AK056321.1| Homo sapiens cDNA FLJ31759 fis, clone NT2RI20077... 42 1.7
37gb|AE011779.1| Xanthomonas axonopodis pv. citri str. 306, secti... 42 1.7
38emb|CR594449.1| full-length cDNA clone CS0CAP008YH14 of Thymus o... 42 1.7
39emb|CR593830.1| full-length cDNA clone CS0DK005YL15 of HeLa cell... 42 1.7
40gb|AC012507.9| Homo sapiens BAC clone RP11-499P1 from 2, complet... 42 1.7
41gb|AY049777.1| Homo sapiens BRI3 mRNA, complete cds 42 1.7
42emb|CR457208.1| Homo sapiens full open reading frame cDNA clone ... 42 1.7
43gb|AF272043.1|AF272043 Homo sapiens BRI3 mRNA, complete cds 42 1.7
44dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
45dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
46dbj|AK222697.1| Homo sapiens mRNA for integral membrane protein ... 42 1.7
47gb|AC127279.3| Mus musculus BAC clone RP24-247K4 from chromosome... 42 1.7
48gb|AF271781.1|AF271781 Homo sapiens NPD018 mRNA, complete cds 42 1.7
49dbj|AP005471.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
50dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
51gb|BC050668.1| Homo sapiens integral membrane protein 2C, transc... 42 1.7
52gb|BC025742.1| Homo sapiens integral membrane protein 2C, transc... 42 1.7
53gb|BC002424.1| Homo sapiens integral membrane protein 2C, transc... 42 1.7
54gb|AC132420.5| Mus musculus BAC clone RP23-292P14 from 3, comple... 42 1.7
55dbj|AB003629.1| Homo sapiens hucep-14 mRNA for cerebral protein-... 42 1.7
56ref|XM_479919.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.8
57gb|AC160245.2| Culex pipiens quinquefasciatus, clone Culex pipie... 40 6.8
58gb|AY484588.1| Musa acuminata clone MuG9, genomic sequence 40 6.8
59gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 6.8
60gb|AC135188.2| Mus musculus BAC clone RP23-206P4 from chromosome... 40 6.8
61emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete ... 40 6.8
62gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 6.8
63gb|AF305543.1|AF305543 Chlamydomonas reinhardtii cytochrome c ox... 40 6.8
64dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
65gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.8
66dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 6.8
67dbj|AP004229.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
68dbj|AP003988.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
69dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
70emb|BX649457.15| Zebrafish DNA sequence from clone DKEYP-87E7 in... 40 6.8
71emb|AL929037.3| Mouse DNA sequence from clone RP23-297K24 on chr... 40 6.8 
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  234 bits (118), Expect = 2e-58
 Identities = 187/210 (89%)
 Strand = Plus / Minus

                                                                            
Query: 135      tccatcctctgcgtcctctcattcaccgactccttctcctacctggggttccagcccacg 194
                |||||||| ||||| || || |||||||||||  | |||||||| |||||||||  || |
Sbjct: 26626745 tccatcctgtgcgtgctgtccttcaccgactcgctgtcctacctcgggttccaggtcagg 26626686

                                                                            
Query: 195      agcgtcgacaagcgggagagcagccgccagtacctctactggggcgcccgcatcgactgc 254
                 ||||||||||| ||||||||||||||   ||||||||||||||||||  ||||||||||
Sbjct: 26626685 ggcgtcgacaagagggagagcagccgcagctacctctactggggcgccgccatcgactgc 26626626

                                                                            
Query: 255      cccggcaagcactgcagctcctgcgccggcctcggccaccaggagtccagcctccgctgc 314
                |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 26626625 cccggcaagcactgcgcctcctgcgccggcctcggccaccaggagtccagcctccgctgc 26626566

                                              
Query: 315      gccctcgaggaggccctcttcctcgacagg 344
                ||||||||||||||||| || || ||||||
Sbjct: 26626565 gccctcgaggaggccctgtttcttgacagg 26626536



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 42/44 (95%), Gaps = 1/44 (2%)
 Strand = Plus / Minus

                                                            
Query: 17       cctcctcc-ctcccatggcgatcccctaccggatcaccggcggc 59
                |||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 26626873 cctcctcctctcccatggcgatcccctaccggatcaccgccggc 26626830



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                               
Query: 354      atgccctcaaggatgtgccttagttcagtgcacaacacaaaggggat 400
                ||||| |||||| ||||||||| |||||||||||| |||| ||||||
Sbjct: 26626342 atgccttcaaggttgtgccttaattcagtgcacaatacaagggggat 26626296



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                     
Query: 435      tgggaaacaagttattgcgcaatggaatccttatatgatatagacctcatatc 487
                |||||||||||||  || || |||||||| || ||||| ||||||||||||||
Sbjct: 26626143 tgggaaacaagttcatgtgcgatggaatctttgtatgacatagacctcatatc 26626091
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>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1340_C08
          Length = 192167

 Score =  234 bits (118), Expect = 2e-58
 Identities = 187/210 (89%)
 Strand = Plus / Minus

                                                                          
Query: 135    tccatcctctgcgtcctctcattcaccgactccttctcctacctggggttccagcccacg 194
              |||||||| ||||| || || |||||||||||  | |||||||| |||||||||  || |
Sbjct: 172016 tccatcctgtgcgtgctgtccttcaccgactcgctgtcctacctcgggttccaggtcagg 171957

                                                                          
Query: 195    agcgtcgacaagcgggagagcagccgccagtacctctactggggcgcccgcatcgactgc 254
               ||||||||||| ||||||||||||||   ||||||||||||||||||  ||||||||||
Sbjct: 171956 ggcgtcgacaagagggagagcagccgcagctacctctactggggcgccgccatcgactgc 171897

                                                                          
Query: 255    cccggcaagcactgcagctcctgcgccggcctcggccaccaggagtccagcctccgctgc 314
              |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171896 cccggcaagcactgcgcctcctgcgccggcctcggccaccaggagtccagcctccgctgc 171837

                                            
Query: 315    gccctcgaggaggccctcttcctcgacagg 344
              ||||||||||||||||| || || ||||||
Sbjct: 171836 gccctcgaggaggccctgtttcttgacagg 171807



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 42/44 (95%), Gaps = 1/44 (2%)
 Strand = Plus / Minus

                                                          
Query: 17     cctcctcc-ctcccatggcgatcccctaccggatcaccggcggc 59
              |||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 172144 cctcctcctctcccatggcgatcccctaccggatcaccgccggc 172101



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                             
Query: 354    atgccctcaaggatgtgccttagttcagtgcacaacacaaaggggat 400
              ||||| |||||| ||||||||| |||||||||||| |||| ||||||
Sbjct: 171613 atgccttcaaggttgtgccttaattcagtgcacaatacaagggggat 171567



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                   
Query: 435    tgggaaacaagttattgcgcaatggaatccttatatgatatagacctcatatc 487
              |||||||||||||  || || |||||||| || ||||| ||||||||||||||
Sbjct: 171414 tgggaaacaagttcatgtgcgatggaatctttgtatgacatagacctcatatc 171362
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>dbj|AP004671.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0524G08
          Length = 146690

 Score =  234 bits (118), Expect = 2e-58
 Identities = 187/210 (89%)
 Strand = Plus / Minus

                                                                         
Query: 135   tccatcctctgcgtcctctcattcaccgactccttctcctacctggggttccagcccacg 194
             |||||||| ||||| || || |||||||||||  | |||||||| |||||||||  || |
Sbjct: 44349 tccatcctgtgcgtgctgtccttcaccgactcgctgtcctacctcgggttccaggtcagg 44290

                                                                         
Query: 195   agcgtcgacaagcgggagagcagccgccagtacctctactggggcgcccgcatcgactgc 254
              ||||||||||| ||||||||||||||   ||||||||||||||||||  ||||||||||
Sbjct: 44289 ggcgtcgacaagagggagagcagccgcagctacctctactggggcgccgccatcgactgc 44230

                                                                         
Query: 255   cccggcaagcactgcagctcctgcgccggcctcggccaccaggagtccagcctccgctgc 314
             |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 44229 cccggcaagcactgcgcctcctgcgccggcctcggccaccaggagtccagcctccgctgc 44170

                                           
Query: 315   gccctcgaggaggccctcttcctcgacagg 344
             ||||||||||||||||| || || ||||||
Sbjct: 44169 gccctcgaggaggccctgtttcttgacagg 44140



 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 42/44 (95%), Gaps = 1/44 (2%)
 Strand = Plus / Minus

                                                         
Query: 17    cctcctcc-ctcccatggcgatcccctaccggatcaccggcggc 59
             |||||||| |||||||||||||||||||||||||||||| ||||
Sbjct: 44477 cctcctcctctcccatggcgatcccctaccggatcaccgccggc 44434



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 354   atgccctcaaggatgtgccttagttcagtgcacaacacaaaggggat 400
             ||||| |||||| ||||||||| |||||||||||| |||| ||||||
Sbjct: 43946 atgccttcaaggttgtgccttaattcagtgcacaatacaagggggat 43900



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                  
Query: 435   tgggaaacaagttattgcgcaatggaatccttatatgatatagacctcatatc 487
             |||||||||||||  || || |||||||| || ||||| ||||||||||||||
Sbjct: 43747 tgggaaacaagttcatgtgcgatggaatctttgtatgacatagacctcatatc 43695
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  186 bits (94), Expect = 5e-44
 Identities = 115/122 (94%)
 Strand = Plus / Plus

                                                                            
Query: 223      agtacctctactggggcgcccgcatcgactgccccggcaagcactgcagctcctgcgccg 282
                ||||||| |||||||||| |||| ||||||||||||||||||||||| || |||||||||
Sbjct: 14175542 agtacctgtactggggcggccgcgtcgactgccccggcaagcactgcggcacctgcgccg 14175601

                                                                            
Query: 283      gcctcggccaccaggagtccagcctccgctgcgccctcgaggaggccctcttcctcgaca 342
                |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 14175602 gcctcggccaccaggagtccagcctccgctgcgccctcgaggaggctctcttcctcggca 14175661

                  
Query: 343      gg 344
                ||
Sbjct: 14175662 gg 14175663



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 354      atgccctcaaggatgtgccttagttcagtgcacaacacaaa 394
                ||||||||||| ||||||||||| || || || ||||||||
Sbjct: 14176661 atgccctcaagaatgtgccttagctcggtacataacacaaa 14176701
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>gb|AC125784.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBb0012F18, from chromosome 3, complete sequence
          Length = 122903

 Score =  186 bits (94), Expect = 5e-44
 Identities = 115/122 (94%)
 Strand = Plus / Plus

                                                                         
Query: 223   agtacctctactggggcgcccgcatcgactgccccggcaagcactgcagctcctgcgccg 282
             ||||||| |||||||||| |||| ||||||||||||||||||||||| || |||||||||
Sbjct: 49833 agtacctgtactggggcggccgcgtcgactgccccggcaagcactgcggcacctgcgccg 49892

                                                                         
Query: 283   gcctcggccaccaggagtccagcctccgctgcgccctcgaggaggccctcttcctcgaca 342
             |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 49893 gcctcggccaccaggagtccagcctccgctgcgccctcgaggaggctctcttcctcggca 49952

               
Query: 343   gg 344
             ||
Sbjct: 49953 gg 49954



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 354   atgccctcaaggatgtgccttagttcagtgcacaacacaaa 394
             ||||||||||| ||||||||||| || || || ||||||||
Sbjct: 50952 atgccctcaagaatgtgccttagctcggtacataacacaaa 50992
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  186 bits (94), Expect = 5e-44
 Identities = 115/122 (94%)
 Strand = Plus / Plus

                                                                            
Query: 223      agtacctctactggggcgcccgcatcgactgccccggcaagcactgcagctcctgcgccg 282
                ||||||| |||||||||| |||| ||||||||||||||||||||||| || |||||||||
Sbjct: 14170517 agtacctgtactggggcggccgcgtcgactgccccggcaagcactgcggcacctgcgccg 14170576

                                                                            
Query: 283      gcctcggccaccaggagtccagcctccgctgcgccctcgaggaggccctcttcctcgaca 342
                |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||
Sbjct: 14170577 gcctcggccaccaggagtccagcctccgctgcgccctcgaggaggctctcttcctcggca 14170636

                  
Query: 343      gg 344
                ||
Sbjct: 14170637 gg 14170638



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 354      atgccctcaaggatgtgccttagttcagtgcacaacacaaa 394
                ||||||||||| ||||||||||| || || || ||||||||
Sbjct: 14171636 atgccctcaagaatgtgccttagctcggtacataacacaaa 14171676
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>ref|XM_479295.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1310

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                       
Query: 324 gaggccctcttcctcgacaggattttcgtcatgccctcaaggatgtgccttagttcagtg 383
           |||||||| || || ||||| || || || ||||| |||||| ||||||||| |||||||
Sbjct: 1   gaggccctgtttcttgacagaatatttgtgatgccttcaaggttgtgccttaattcagtg 60

                            
Query: 384 cacaacacaaaggggat 400
           ||||| |||| ||||||
Sbjct: 61  cacaatacaagggggat 77



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 435 tgggaaacaagttattgcgcaatggaatccttatatgatatagacctcatatc 487
           |||||||||||||  || || |||||||| || ||||| ||||||||||||||
Sbjct: 118 tgggaaacaagttcatgtgcgatggaatctttgtatgacatagacctcatatc 170
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>dbj|AK100810.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121O08, full
           insert sequence
          Length = 1310

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                       
Query: 324 gaggccctcttcctcgacaggattttcgtcatgccctcaaggatgtgccttagttcagtg 383
           |||||||| || || ||||| || || || ||||| |||||| ||||||||| |||||||
Sbjct: 1   gaggccctgtttcttgacagaatatttgtgatgccttcaaggttgtgccttaattcagtg 60

                            
Query: 384 cacaacacaaaggggat 400
           ||||| |||| ||||||
Sbjct: 61  cacaatacaagggggat 77



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 435 tgggaaacaagttattgcgcaatggaatccttatatgatatagacctcatatc 487
           |||||||||||||  || || |||||||| || ||||| ||||||||||||||
Sbjct: 118 tgggaaacaagttcatgtgcgatggaatctttgtatgacatagacctcatatc 170
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>gb|AC135957.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0037P02
              map E61794SA, complete sequence
          Length = 131645

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 87/107 (81%)
 Strand = Plus / Minus

                                                                          
Query: 136    ccatcctctgcgtcctctcattcaccgactccttctcctacctggggttccagcccacga 195
              ||||||| ||||| || || ||||| |||||  | || ||||| ||||||||   || ||
Sbjct: 129468 ccatcctgtgcgtgctgtccttcactgactcgctatcgtacctcgggttccatgtcagga 129409

                                                             
Query: 196    gcgtcgacaagcgggagagcagccgccagtacctctactggggcgcc 242
              ||||||||||| || ||| ||||||  | ||||||||||||||||||
Sbjct: 129408 gcgtcgacaagaggcagatcagccgtaactacctctactggggcgcc 129362
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>gb|AC139171.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0024B09, complete sequence
          Length = 132563

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 87/107 (81%)
 Strand = Plus / Minus

                                                                         
Query: 136   ccatcctctgcgtcctctcattcaccgactccttctcctacctggggttccagcccacga 195
             ||||||| ||||| || || |||||||||||  | |||||||| || |||||   || ||
Sbjct: 91357 ccatcctgtgcgtgctgtccttcaccgactcgctgtcctacctcggattccatgtcagga 91298

                                                            
Query: 196   gcgtcgacaagcgggagagcagccgccagtacctctactggggcgcc 242
             | ||| ||||| ||||||||||||||   || |||||||||||||||
Sbjct: 91297 gtgtccacaagagggagagcagccgcagctagctctactggggcgcc 91251
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 87/107 (81%)
 Strand = Plus / Minus

                                                                            
Query: 136      ccatcctctgcgtcctctcattcaccgactccttctcctacctggggttccagcccacga 195
                ||||||| ||||| || || |||||||||||  | |||||||| || |||||   || ||
Sbjct: 10351496 ccatcctgtgcgtgctgtccttcaccgactcgctgtcctacctcggattccatgtcagga 10351437

                                                               
Query: 196      gcgtcgacaagcgggagagcagccgccagtacctctactggggcgcc 242
                | ||| ||||| ||||||||||||||   || |||||||||||||||
Sbjct: 10351436 gtgtccacaagagggagagcagccgcagctagctctactggggcgcc 10351390



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 87/107 (81%)
 Strand = Plus / Minus

                                                                           
Query: 136     ccatcctctgcgtcctctcattcaccgactccttctcctacctggggttccagcccacga 195
               ||||||| ||||| || || ||||| |||||  | || ||||| ||||||||   || ||
Sbjct: 9576285 ccatcctgtgcgtgctgtccttcactgactcgctatcgtacctcgggttccatgtcagga 9576226

                                                              
Query: 196     gcgtcgacaagcgggagagcagccgccagtacctctactggggcgcc 242
               ||||||||||| || ||| ||||||  | ||||||||||||||||||
Sbjct: 9576225 gcgtcgacaagaggcagatcagccgtaactacctctactggggcgcc 9576179
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 87/107 (81%)
 Strand = Plus / Minus

                                                                            
Query: 136      ccatcctctgcgtcctctcattcaccgactccttctcctacctggggttccagcccacga 195
                ||||||| ||||| || || |||||||||||  | |||||||| || |||||   || ||
Sbjct: 10423193 ccatcctgtgcgtgctgtccttcaccgactcgctgtcctacctcggattccatgtcagga 10423134

                                                               
Query: 196      gcgtcgacaagcgggagagcagccgccagtacctctactggggcgcc 242
                | ||| ||||| ||||||||||||||   || |||||||||||||||
Sbjct: 10423133 gtgtccacaagagggagagcagccgcagctagctctactggggcgcc 10423087



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 87/107 (81%)
 Strand = Plus / Minus

                                                                           
Query: 136     ccatcctctgcgtcctctcattcaccgactccttctcctacctggggttccagcccacga 195
               ||||||| ||||| || || ||||| |||||  | || ||||| ||||||||   || ||
Sbjct: 9647982 ccatcctgtgcgtgctgtccttcactgactcgctatcgtacctcgggttccatgtcagga 9647923

                                                              
Query: 196     gcgtcgacaagcgggagagcagccgccagtacctctactggggcgcc 242
               ||||||||||| || ||| ||||||  | ||||||||||||||||||
Sbjct: 9647922 gcgtcgacaagaggcagatcagccgtaactacctctactggggcgcc 9647876
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>emb|AL035089.21|HS1030M6 Human DNA sequence from clone RP5-1030M6 on chromosome 20q12-13.2
              Contains the 5' end of the C20orf100 gene for a novel HMG
              (high mobility group) box protein similar to KIAA0808, two
              novel genes and two CpG islands, complete sequence
          Length = 173804

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 168    ttctcctacctggggttccagcccac 193
              ||||||||||||||| ||||||||||
Sbjct: 147774 ttctcctacctggggatccagcccac 147799
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>gb|AC123609.11| Mus musculus chromosome 3, clone RP23-281B17, complete sequence
          Length = 223516

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 153  tcattcaccgactccttctcc 173
            |||||||||||||||||||||
Sbjct: 8489 tcattcaccgactccttctcc 8469
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>ref|XM_424682.1| PREDICTED: Gallus gallus similar to AIEBP (LOC427088), mRNA
          Length = 2058

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 263  gcactgcagctcctgcgccggcctc 287
            |||||||||||||||||||| ||||
Sbjct: 1359 gcactgcagctcctgcgccgtcctc 1335
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>ref|NM_001012514.1| Homo sapiens integral membrane protein 2C (ITM2C), transcript
           variant 3, mRNA
          Length = 1982

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 196 cctgcgccggcctcggccacc 216
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>ref|NM_030926.4| Homo sapiens integral membrane protein 2C (ITM2C), transcript
           variant 1, mRNA
          Length = 2123

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 196 cctgcgccggcctcggccacc 216
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>ref|NM_001012516.1| Homo sapiens integral membrane protein 2C (ITM2C), transcript
           variant 2, mRNA
          Length = 2012

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 196 cctgcgccggcctcggccacc 216
to top
>gb|BC098563.1| Homo sapiens integral membrane protein 2C, transcript variant 1,
           mRNA (cDNA clone MGC:111364 IMAGE:30558635), complete
           cds
          Length = 2029

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 120 cctgcgccggcctcggccacc 140
to top
>emb|BX248356.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment
              3/8
          Length = 347625

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 258    ggcaagcactgcagctcctgcgccg 282
              ||||||| |||||||||||||||||
Sbjct: 192235 ggcaagctctgcagctcctgcgccg 192211
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>emb|AL606464.11| Mouse DNA sequence from clone RP23-462P2 on chromosome 13 Contains the
             3' end of the Slc17a1 gene for solute carrier family 17
             vesicular glutamate transporter) member 1, the gene for a
             novel solute carrier family 17 (Slc17a) member, a U1 small
             nuclear ribonucleoprotein 1C (Snrp1c) pseudogene, a H2B
             histone family (H2b) pseudogene, the gene for a novel H2A
             histone family (H2a) member, a novel gene, the gene for
             the ortholog of human secretagogin, EF-hand calcium
             binding protein SCGN and the 3' end of a novel gene,
             complete sequence
          Length = 183698

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 258   ggcaagcactgcagctcctgc 278
             |||||||||||||||||||||
Sbjct: 47633 ggcaagcactgcagctcctgc 47653
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>emb|AL713651.1|HSM802978 Homo sapiens mRNA; cDNA DKFZp586H032 (from clone DKFZp586H032)
          Length = 2033

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 131 cctgcgccggcctcggccacc 151
to top
>emb|AL136603.1|HSM800007 Homo sapiens mRNA; cDNA DKFZp564L1216 (from clone DKFZp564L1216)
          Length = 2042

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 148 cctgcgccggcctcggccacc 168
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>emb|CR926115.1| Pongo pygmaeus mRNA; cDNA DKFZp459I1810 (from clone DKFZp459I1810)
          Length = 2024

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 147 cctgcgccggcctcggccacc 167
to top
>emb|CR926009.1| Pongo pygmaeus mRNA; cDNA DKFZp459D0320 (from clone DKFZp459D0320)
          Length = 2043

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 164 cctgcgccggcctcggccacc 184
to top
>emb|CR619124.1| full-length cDNA clone CS0DA002YM06 of Neuroblastoma of Homo
           sapiens (human)
          Length = 1937

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 115 cctgcgccggcctcggccacc 135
to top
>emb|CR615397.1| full-length cDNA clone CS0DE011YB13 of Placenta of Homo sapiens
           (human)
          Length = 2012

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 153 cctgcgccggcctcggccacc 173
to top
>emb|CR613799.1| full-length cDNA clone CS0DA009YM18 of Neuroblastoma of Homo
           sapiens (human)
          Length = 1984

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 130 cctgcgccggcctcggccacc 150
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>emb|CR611572.1| full-length cDNA clone CS0DI012YE24 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1939

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 93  cctgcgccggcctcggccacc 113
to top
>emb|CR604981.1| full-length cDNA clone CS0DD008YL04 of Neuroblastoma Cot
           50-normalized of Homo sapiens (human)
          Length = 2011

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 174 cctgcgccggcctcggccacc 194
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>emb|CR603208.1| full-length cDNA clone CS0DI034YM09 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1968

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 125 cctgcgccggcctcggccacc 145
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>emb|CR600725.1| full-length cDNA clone CS0DE004YB20 of Placenta of Homo sapiens
           (human)
          Length = 1989

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 130 cctgcgccggcctcggccacc 150
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>emb|CR600331.1| full-length cDNA clone CS0DN005YE15 of Adult brain of Homo sapiens
           (human)
          Length = 1474

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 140 cctgcgccggcctcggccacc 160
to top
>dbj|AK075361.1| Homo sapiens cDNA PSEC0047 fis, clone NT2RP1001042, highly similar
           to Integral membrane protein 2C
          Length = 2048

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 172 cctgcgccggcctcggccacc 192
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>emb|CR598205.1| full-length cDNA clone CS0DI074YI14 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 1950

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 104 cctgcgccggcctcggccacc 124
to top
>dbj|AK056321.1| Homo sapiens cDNA FLJ31759 fis, clone NT2RI2007723, highly similar
           to Homo sapiens BRI3 mRNA
          Length = 1889

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 154 cctgcgccggcctcggccacc 174
to top
>gb|AE011779.1| Xanthomonas axonopodis pv. citri str. 306,  section 157 of 469 of the
             complete genome
          Length = 10887

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 276   tgcgccggcctcggccaccag 296
             |||||||||||||||||||||
Sbjct: 10163 tgcgccggcctcggccaccag 10143
to top
>emb|CR594449.1| full-length cDNA clone CS0CAP008YH14 of Thymus of Homo sapiens
           (human)
          Length = 1984

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 136 cctgcgccggcctcggccacc 156
to top
>emb|CR593830.1| full-length cDNA clone CS0DK005YL15 of HeLa cells Cot 25-normalized
           of Homo sapiens (human)
          Length = 1830

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 153 cctgcgccggcctcggccacc 173
to top
>gb|AC012507.9| Homo sapiens BAC clone RP11-499P1 from 2, complete sequence
          Length = 165704

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 274   cctgcgccggcctcggccacc 294
             |||||||||||||||||||||
Sbjct: 79482 cctgcgccggcctcggccacc 79502
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>gb|AY049777.1| Homo sapiens BRI3 mRNA, complete cds
          Length = 836

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 93  cctgcgccggcctcggccacc 113
to top
>emb|CR457208.1| Homo sapiens full open reading frame cDNA clone RZPDo834H0212D for
           gene ITM2C, integral membrane protein 2C; complete cds,
           incl. stopcodon
          Length = 804

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 76  cctgcgccggcctcggccacc 96
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>gb|AF272043.1|AF272043 Homo sapiens BRI3 mRNA, complete cds
          Length = 2065

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 189 cctgcgccggcctcggccacc 209
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 75       ccgctgccgctgcctaccgcg 95
                |||||||||||||||||||||
Sbjct: 25386665 ccgctgccgctgcctaccgcg 25386645



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 95      gagggcgctcctcgccgccg 114
               ||||||||||||||||||||
Sbjct: 1636017 gagggcgctcctcgccgccg 1636036
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 11       cggtcccctcctccctcccat 31
                |||||||||||||||||||||
Sbjct: 21686058 cggtcccctcctccctcccat 21686078
to top
>dbj|AK222697.1| Homo sapiens mRNA for integral membrane protein 3 variant, clone:
           CBR05009
          Length = 1728

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 154 cctgcgccggcctcggccacc 174
to top
>gb|AC127279.3| Mus musculus BAC clone RP24-247K4 from chromosome 10, complete sequence
          Length = 185573

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 130    tcctctccatcctctgcgtcctctc 154
              |||||| ||||||||||||||||||
Sbjct: 114171 tcctctgcatcctctgcgtcctctc 114195
to top
>gb|AF271781.1|AF271781 Homo sapiens NPD018 mRNA, complete cds
          Length = 2119

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 192 cctgcgccggcctcggccacc 212
to top
>dbj|AP005471.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0062E01
          Length = 161804

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 11    cggtcccctcctccctcccat 31
             |||||||||||||||||||||
Sbjct: 84989 cggtcccctcctccctcccat 85009
to top
>dbj|AP004765.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0711H09
          Length = 185858

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 75    ccgctgccgctgcctaccgcg 95
             |||||||||||||||||||||
Sbjct: 17981 ccgctgccgctgcctaccgcg 17961
to top
>gb|BC050668.1| Homo sapiens integral membrane protein 2C, transcript variant 3,
           mRNA (cDNA clone MGC:60191 IMAGE:5759920), complete cds
          Length = 1937

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 142 cctgcgccggcctcggccacc 162
to top
>gb|BC025742.1| Homo sapiens integral membrane protein 2C, transcript variant 2,
           mRNA (cDNA clone MGC:34128 IMAGE:5224043), complete cds
          Length = 1993

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 122 cctgcgccggcctcggccacc 142
to top
>gb|BC002424.1| Homo sapiens integral membrane protein 2C, transcript variant 1,
           mRNA (cDNA clone MGC:3011 IMAGE:3162430), complete cds
          Length = 2043

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 134 cctgcgccggcctcggccacc 154
to top
>gb|AC132420.5| Mus musculus BAC clone RP23-292P14 from 3, complete sequence
          Length = 155821

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 153    tcattcaccgactccttctcc 173
              |||||||||||||||||||||
Sbjct: 128358 tcattcaccgactccttctcc 128338
to top
>dbj|AB003629.1| Homo sapiens hucep-14 mRNA for cerebral protein-14, complete cds
          Length = 804

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 274 cctgcgccggcctcggccacc 294
           |||||||||||||||||||||
Sbjct: 76  cctgcgccggcctcggccacc 96
to top
>ref|XM_479919.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1134

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 95  gagggcgctcctcgccgccg 114
           ||||||||||||||||||||
Sbjct: 141 gagggcgctcctcgccgccg 160
to top
>gb|AC160245.2| Culex pipiens quinquefasciatus, clone Culex pipiens
             quinquefasciatus-3940136D9, complete sequence
          Length = 121820

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 445   gttattgcgcaatggaatcc 464
             ||||||||||||||||||||
Sbjct: 25004 gttattgcgcaatggaatcc 24985
to top
>gb|AY484588.1| Musa acuminata clone MuG9, genomic sequence
          Length = 73268

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 317   cctcgaggaggccctcttcctcga 340
             ||||||||||||| ||||||||||
Sbjct: 38312 cctcgaggaggccttcttcctcga 38289
to top
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   cgccggcctcggccaccagg 297
             ||||||||||||||||||||
Sbjct: 95605 cgccggcctcggccaccagg 95586
to top
>gb|AC135188.2| Mus musculus BAC clone RP23-206P4 from chromosome 14, complete sequence
          Length = 182464

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 153   tcattcaccgactccttctcctac 176
             |||||||||||||||||| |||||
Sbjct: 71934 tcattcaccgactccttcgcctac 71957
to top
>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29
          Length = 291000

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 106    tcgccgccgtcatcaccggg 125
              ||||||||||||||||||||
Sbjct: 160629 tcgccgccgtcatcaccggg 160648
to top
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 279     gccggcctcggccaccagga 298
               ||||||||||||||||||||
Sbjct: 2583825 gccggcctcggccaccagga 2583844
to top
>gb|AF305543.1|AF305543 Chlamydomonas reinhardtii cytochrome c oxidase subunit II (cox2b)
           gene, complete cds; nuclear gene for mitochondrial
           product
          Length = 2877

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 68  gcggagcccgctgccgctgc 87
           ||||||||||||||||||||
Sbjct: 186 gcggagcccgctgccgctgc 167
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 103      tcctcgccgccgtcatcacc 122
                ||||||||||||||||||||
Sbjct: 11141682 tcctcgccgccgtcatcacc 11141701
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 277     gcgccggcctcggccaccag 296
               ||||||||||||||||||||
Sbjct: 1941260 gcgccggcctcggccaccag 1941279
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 105     ctcgccgccgtcatcaccggggcg 128
               |||||||||| |||||||||||||
Sbjct: 6766364 ctcgccgccggcatcaccggggcg 6766387
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>dbj|AP004229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1124_E11
          Length = 133524

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    tcctcgccgccgtcatcacc 122
              ||||||||||||||||||||
Sbjct: 124376 tcctcgccgccgtcatcacc 124395
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>dbj|AP003988.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1057_D08
          Length = 119557

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   tcctcgccgccgtcatcacc 122
             ||||||||||||||||||||
Sbjct: 60861 tcctcgccgccgtcatcacc 60880
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>dbj|AP004591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0582D05
          Length = 150483

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 95    gagggcgctcctcgccgccg 114
             ||||||||||||||||||||
Sbjct: 35517 gagggcgctcctcgccgccg 35536
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>emb|BX649457.15| Zebrafish DNA sequence from clone DKEYP-87E7 in linkage group 22,
              complete sequence
          Length = 159207

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    gtcctctccatcctctgcgt 148
              ||||||||||||||||||||
Sbjct: 125069 gtcctctccatcctctgcgt 125088
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>emb|AL929037.3| Mouse DNA sequence from clone RP23-297K24 on chromosome 2, complete
             sequence
          Length = 156705

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    cggtcccctcctccctccca 30
             ||||||||||||||||||||
Sbjct: 17739 cggtcccctcctccctccca 17720


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,823,021
Number of Sequences: 3902068
Number of extensions: 3823021
Number of successful extensions: 85227
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84161
Number of HSP's gapped (non-prelim): 1066
length of query: 501
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 479
effective length of database: 17,147,199,772
effective search space: 8213508690788
effective search space used: 8213508690788
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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