ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast74b03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF355456.1|AF355456 Hordeum vulgare thaumatin-like protein TLP6 mRNA, complete cds Length = 921 Score = 860 bits (434), Expect = 0.0 Identities = 443/446 (99%) Strand = Plus / Plus Query: 1 tacacggtgtggccgggcgcgctcccgggtggcggtgtgcgtctcgacccaggccagtcg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 191 tacacggtgtggccgggcgcgctcccgggtggcggtgtgcgtctcgacccaggccagtcg 250 Query: 61 tgggcgctgaacatgcccgcgggtaccgcgggcgccagggtgtggccgcgcaccgggtgc 120 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 251 tgggcgctgaacatgcccgcgggcaccgcgggcgccagggtgtggccgcgcaccgggtgc 310 Query: 121 accttcgacggcagcggccgcggccggtgcatcaccggcgactgcaacggtgtgctggca 180 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 311 accttcgacggcagcggccgcggccggtgcatcacgggcgactgcaacggcgtgctggca 370 Query: 181 tgccgggtgtccggccagcagccgaccacgctggccgagtacaccctgggccagggcgcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 371 tgccgggtgtccggccagcagccgaccacgctggccgagtacaccctgggccagggcgcg 430 Query: 241 aacaaggacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttcgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 431 aacaaggacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttcgag 490 Query: 301 cccgtgggagggtgccgtgctgcgcggtgcgccacggacatcaccaaggattgcctcaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 491 cccgtgggagggtgccgtgctgcgcggtgcgccacggacatcaccaaggattgcctcaag 550 Query: 361 gagctgcaggtgccgggagggtgcgcgagcgcgtgcggcaagttcggcggcgacacctac 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 551 gagctgcaggtgccgggagggtgcgcgagcgcgtgcggcaagttcggcggcgacacctac 610 Query: 421 tgctgccgtggccagtttgagcacaa 446 |||||||||||||||||||||||||| Sbjct: 611 tgctgccgtggccagtttgagcacaa 636
>emb|AJ001268.1|HVPATHPR5 Hordeum vulgare mRNA for basic pathogenesis-related protein, PR5 Length = 867 Score = 856 bits (432), Expect = 0.0 Identities = 443/446 (99%), Gaps = 3/446 (0%) Strand = Plus / Plus Query: 1 tacacggtgtggccgggcgcgctcccgggtggcggtgtgcgtctcgacccaggccagtcg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tacacggtgtggccgggcgcgctcccgggtggcggtgtgcgtctcgacccaggccagtcg 180 Query: 61 tgggcgctgaacatgcccgcgggtaccgcgggcgccagggtgtggccgcgcaccgggtgc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tgggcgctgaacatgcccgcgggtaccgcgggcgccagggtgtggccgcgcaccgggtgc 240 Query: 121 accttcgacggcagcggccgcggccggtgcatcaccggcgactgcaacggtgtgctggca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 241 accttcgacggcagcggccgcggccggtgcatcaccggcgactgcaacggtgtgctggca 300 Query: 181 tgccgggtgtccggccagcagccgaccacgctggccgagtacaccctgggccagggcgcg 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 tgccgggtgtccggccagcagccgaccacgctggccgagtacaccctgggccagggcgcg 360 Query: 241 aacaaggacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttcgag 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 aacaaggacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttcgag 420 Query: 301 cccgtgggagggtgccgtgctgcgcggtgcgccacggacatcaccaaggattgcctcaag 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 cccgtgggagggtgccgtgctgcgcggtgcgccacggacatcaccaaggattgcctcaag 480 Query: 361 gagctgcaggtgccgggagggtgcgcgagcgcgtgcggcaagttcggcggcgacacctac 420 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 481 gagctgcaggtgccgggagggtgcgcga---cgtgcggcaagttcggcggcgacacctac 537 Query: 421 tgctgccgtggccagtttgagcacaa 446 |||||||||||||||||||||||||| Sbjct: 538 tgctgccgtggccagtttgagcacaa 563
>gb|AF355457.1|AF355457 Hordeum vulgare thaumatin-like protein TLP7 mRNA, complete cds Length = 967 Score = 656 bits (331), Expect = 0.0 Identities = 420/449 (93%), Gaps = 3/449 (0%) Strand = Plus / Plus Query: 1 tacacggtgtggccgggcgcgctcccgggtggcggtgtgcgtctcgacccaggccagtcg 60 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 158 tacacggtgtggccgggcgcgctcccaggtggcggcgtgcgtctcgacccaggccagtcg 217 Query: 61 tgggcgctgaacatgcccgcgggtaccgcgggcgccagggtgtggccgcgcaccgggtgc 120 ||||| ||||||||||| || || ||||||||||||||||||||||||||||| |||||| Sbjct: 218 tgggctctgaacatgccggccggcaccgcgggcgccagggtgtggccgcgcacggggtgc 277 Query: 121 accttcgacggcagcggccgcggccggtgcatcaccggcgactgcaacggtgtgctggca 180 |||||||||||||||||||| ||||||||||||||||| |||||| ||| | ||||||| Sbjct: 278 accttcgacggcagcggccgtggccggtgcatcaccggagactgcggcggcgcgctggca 337 Query: 181 tgccgggtgtccggccagcagccgaccacgctggccgagtacaccctgggccagggcgcg 240 ||||| ||||||||||||||||| |||||| ||||||||||||||||||| ||||||||| Sbjct: 338 tgccgcgtgtccggccagcagcccaccacgttggccgagtacaccctgggacagggcgcg 397 Query: 241 aacaaggacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttcgag 300 |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 398 aacaaggacttcttcgacctgtccgtcatcgacgggttcaacgttcccatgagcttcgag 457 Query: 301 cccgtgggag---ggtgccgtgctgcgcggtgcgccacggacatcaccaaggattgcctc 357 ||||| || | |||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 458 cccgtcggcgcgtcgtgccgtgctgcgcggtgtgccacggacatcaccaaggagtgcctc 517 Query: 358 aaggagctgcaggtgccgggagggtgcgcgagcgcgtgcggcaagttcggcggcgacacc 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 518 aaggagctgcaggtgccgggagggtgcgcgagcgcgtgcggcaagttcggcggcgacacc 577 Query: 418 tactgctgccgtggccagtttgagcacaa 446 ||||||||||| |||||||| |||||||| Sbjct: 578 tactgctgccggggccagttcgagcacaa 606
>gb|AF016327.1|AF016327 Hordeum vulgare Barperm1 (perm1) mRNA, partial cds Length = 616 Score = 656 bits (331), Expect = 0.0 Identities = 420/449 (93%), Gaps = 3/449 (0%) Strand = Plus / Plus Query: 1 tacacggtgtggccgggcgcgctcccgggtggcggtgtgcgtctcgacccaggccagtcg 60 |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct: 37 tacacggtgtggccgggcgcgctcccaggtggcggcgtgcgtctcgacccaggccagtcg 96 Query: 61 tgggcgctgaacatgcccgcgggtaccgcgggcgccagggtgtggccgcgcaccgggtgc 120 ||||| ||||||||||| || || ||||||||||||||||||||||||||||| |||||| Sbjct: 97 tgggctctgaacatgccggccggcaccgcgggcgccagggtgtggccgcgcacggggtgc 156 Query: 121 accttcgacggcagcggccgcggccggtgcatcaccggcgactgcaacggtgtgctggca 180 |||||||||||||||||||| ||||||||||||||||| |||||| ||| | ||||||| Sbjct: 157 accttcgacggcagcggccgtggccggtgcatcaccggagactgcggcggcgcgctggca 216 Query: 181 tgccgggtgtccggccagcagccgaccacgctggccgagtacaccctgggccagggcgcg 240 ||||| ||||||||||||||||| |||||| ||||||||||||||||||| ||||||||| Sbjct: 217 tgccgcgtgtccggccagcagcccaccacgttggccgagtacaccctgggacagggcgcg 276 Query: 241 aacaaggacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttcgag 300 |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 277 aacaaggacttcttcgacctgtccgtcatcgacgggttcaacgttcccatgagcttcgag 336 Query: 301 cccgtgggag---ggtgccgtgctgcgcggtgcgccacggacatcaccaaggattgcctc 357 ||||| || | |||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 337 cccgtcggcgcgtcgtgccgtgctgcgcggtgtgccacggacatcaccaaggagtgcctc 396 Query: 358 aaggagctgcaggtgccgggagggtgcgcgagcgcgtgcggcaagttcggcggcgacacc 417 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 397 aaggagctgcaggtgccgggagggtgcgcgagcgcgtgcggcaagttcggcggcgacacc 456 Query: 418 tactgctgccgtggccagtttgagcacaa 446 ||||||||||| |||||||| |||||||| Sbjct: 457 tactgctgccggggccagttcgagcacaa 485
>gb|AF442967.1| Triticum aestivum clone WAS-3a thaumatin-like protein mRNA, complete cds Length = 925 Score = 624 bits (315), Expect = e-176 Identities = 416/449 (92%), Gaps = 3/449 (0%) Strand = Plus / Plus Query: 1 tacacggtgtggccgggcgcgctcccgggtggcggtgtgcgtctcgacccaggccagtcg 60 |||||||||||||||||||||||||| || ||||| |||||||||||||| |||||||| Sbjct: 163 tacacggtgtggccgggcgcgctcccaggcggcggcgtgcgtctcgacccgggccagtct 222 Query: 61 tgggcgctgaacatgcccgcgggtaccgcgggcgccagggtgtggccgcgcaccgggtgc 120 |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 223 tgggcgctgaacatgcccgccggcaccgcgggcgccagggtgtggccgcgcaccgggtgc 282 Query: 121 accttcgacggcagcggccgcggccggtgcatcaccggcgactgcaacggtgtgctggca 180 |||||||||||||||||||| |||||||||||||| ||||||||| ||| |||||| Sbjct: 283 accttcgacggcagcggccggggccggtgcatcacgggcgactgcggcggcacgctggcc 342 Query: 181 tgccgggtgtccggccagcagccgaccacgctggccgagtacaccctgggccagggcgcg 240 ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 343 tgcagggtgtccggccagcagcccaccacgctggccgagtacaccctgggccagggcggg 402 Query: 241 aacaaggacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttcgag 300 ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct: 403 aacaaggacttcttcgacctgtccgtcatcgacgggttcaacgtgcccatgaacttcgag 462 Query: 301 cccgtgggagg---gtgccgtgctgcgcggtgcgccacggacatcaccaaggattgcctc 357 ||||| || || |||||| |||||||| ||||||||||||||||||||||| |||||| Sbjct: 463 cccgtcggcggttcgtgccgcgctgcgcgctgcgccacggacatcaccaaggagtgcctc 522 Query: 358 aaggagctgcaggtgccgggagggtgcgcgagcgcgtgcggcaagttcggcggcgacacc 417 ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 523 aaggagctgcaggtgcccggagggtgcgcgagcgcgtgcggcaaattcggcggcgacacc 582 Query: 418 tactgctgccgtggccagtttgagcacaa 446 || |||||||| |||||||| |||||||| Sbjct: 583 tattgctgccggggccagttcgagcacaa 611
>gb|AY839295.1| Hordeum vulgare thaumatin-like protein TLP5 mRNA, complete cds Length = 918 Score = 379 bits (191), Expect = e-102 Identities = 381/443 (86%), Gaps = 6/443 (1%) Strand = Plus / Plus Query: 10 tggccgggcgcgctcccgggtggcggtgtgcgtctcgacccaggccagtcgtgggcgctg 69 ||||| ||||||||||| || ||||| | ||||||||| || |||||||||||| ||| Sbjct: 152 tggccaggcgcgctcccaggcggcggcgcgcgtctcgatccgggccagtcgtggcagctc 211 Query: 70 aacatgcccgcgggtaccgcgggcgccagggtgtggccgcgcaccgggtgcaccttcgac 129 || ||||||||||| || |||||||||||||||||||||||||| ||||||||||||||| Sbjct: 212 aatatgcccgcgggcacggcgggcgccagggtgtggccgcgcacggggtgcaccttcgac 271 Query: 130 ggcagcggccgcggccggtgcatcaccggcgactgcaacggtgtgctggcatgccgggtg 189 |||||||||| |||||||||||||||||||||||| || | |||| ||||| ||| Sbjct: 272 cgcagcggccgtggccggtgcatcaccggcgactgcgcgggcgctctggtctgccgcgtg 331 Query: 190 tccggccagcagccgaccacgctggccgagtacaccctgggccagggcgcgaacaaggac 249 |||||| ||||||| ||||||||||||||||||| ||||| ||||||| |||| |||| Sbjct: 332 tccggcgagcagccagccacgctggccgagtacacgctggggcagggcgggaaccgggac 391 Query: 250 ttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttcgagcccgtggga 309 || ||||||||||||||||| ||||||||||| ||||| ||||||||| ||||||| || Sbjct: 392 tttttcgacctgtccgtcatagacgggttcaatgtgcccatgagcttccagcccgtcggc 451 Query: 310 gg-gtgccgtgctgcgcgg-----tgcgccacggacatcaccaaggattgcctcaaggag 363 || | |||||| |||||| |||||| |||||||||| | || || || |||| Sbjct: 452 ggcgcaccgtgccgcgcggctacctgcgccgtggacatcacccatgagtgtctgccggag 511 Query: 364 ctgcaggtgccgggagggtgcgcgagcgcgtgcggcaagttcggcggcgacacctactgc 423 ||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 512 ctgcaggtgcccggagggtgcgcgagcgcgtgcggcaagtttggcggcgacacctactgc 571 Query: 424 tgccgtggccagtttgagcacaa 446 ||||| |||||||| |||||||| Sbjct: 572 tgccggggccagttcgagcacaa 594
>gb|U57787.1|ASU57787 Avena sativa permatin precursor mRNA, complete cds Length = 846 Score = 373 bits (188), Expect = e-100 Identities = 379/443 (85%), Gaps = 6/443 (1%) Strand = Plus / Plus Query: 1 tacacggtgtggccgggcgcgctcccgggtggcggtgtgcgtctcgacccaggccagtcg 60 ||||||||||||||||||||||||||||| ||||| ||||| || ||||| ||| ||||| Sbjct: 134 tacacggtgtggccgggcgcgctcccgggcggcggcgtgcggctggacccgggcaagtcg 193 Query: 61 tgggcgctgaacatgcccgcgggtaccgcgggcgccagggtgtggccgcgcaccgggtgc 120 |||||||| |||||||| ||||| ||| |||||||||||||||||||||||| |||||| Sbjct: 194 tgggcgctcaacatgccggcggggacccggggcgccagggtgtggccgcgcacggggtgc 253 Query: 121 accttcgacggcagcggccgcggccggtgcatcaccggcgactgcaacggtgtgctggca 180 |||||||||| ||||||||| || | ||| |||| ||||||||| ||| | |||||| Sbjct: 254 accttcgacgccagcggccgggggcactgcgtcacgggcgactgcggcggcgcgctggcc 313 Query: 181 tgccgggtgtccggccagcagccgaccacgctggccgagtacaccctgggccagggcgcg 240 ||||| |||||||| ||||||||| | |||||||| |||||||| || ||| |||||| | Sbjct: 314 tgccgcgtgtccgggcagcagccggcgacgctggcggagtacacgctcggcaagggcggg 373 Query: 241 aacaaggacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttcgag 300 |||||||||||||||||| |||||||||||||||||||||||||| ||||||||| || Sbjct: 374 gccaaggacttcttcgacctctccgtcatcgacgggttcaacgtgcccatgagcttccag 433 Query: 301 cccgtgggagg------gtgccgtgctgcgcggtgcgccacggacatcaccaaggattgc 354 |||||||| || |||||| | ||| |||||| |||||||||||||| | ||| Sbjct: 434 cccgtgggcggcgcggcgtgccggggcgcgacgtgcgcggcggacatcaccaagcagtgc 493 Query: 355 ctcaaggagctgcaggtgccgggagggtgcgcgagcgcgtgcggcaagttcggcggcgac 414 | |||||||| |||| | || |||||||| ||||||||||||||||||||||||||| Sbjct: 494 ccgcaggagctgaaggtcgccggcgggtgcgccagcgcgtgcggcaagttcggcggcgac 553 Query: 415 acctactgctgccgtggccagtt 437 |||||||||||||| |||||||| Sbjct: 554 acctactgctgccggggccagtt 576
>gb|AC027133.3| Oryza sativa (japonica cultivar-group) chromosome 12 clone OSJNBb0003F09, complete sequence Length = 159600 Score = 121 bits (61), Expect = 2e-24 Identities = 139/165 (84%) Strand = Plus / Plus Query: 1 tacacggtgtggccgggcgcgctcccgggtggcggtgtgcgtctcgacccaggccagtcg 60 ||||||||||||||||||||||| || || ||||| ||||| |||||||||||| ||||| Sbjct: 119148 tacacggtgtggccgggcgcgctgcccggcggcggcgtgcggctcgacccaggcaagtcg 119207 Query: 61 tgggcgctgaacatgcccgcgggtaccgcgggcgccagggtgtggccgcgcaccgggtgc 120 ||| |||| ||| | |||| || ||| || ||||||| | ||||| |||||||| ||| Sbjct: 119208 tggacgctcaacgtcgccgccggcaccaaggccgccaggatctggccccgcaccggctgc 119267 Query: 121 accttcgacggcagcggccgcggccggtgcatcaccggcgactgc 165 |||||||||| |||||||||||| ||| |||||||||||||| Sbjct: 119268 gacttcgacggcgccggccgcggccgctgcctcaccggcgactgc 119312 Score = 111 bits (56), Expect = 2e-21 Identities = 182/224 (81%) Strand = Plus / Minus Query: 1 tacacggtgtggccgggcgcgctcccgggtggcggtgtgcgtctcgacccaggccagtcg 60 ||||||||||||||||||||||||||||| ||||| | || |||||||| || |||||| Sbjct: 139442 tacacggtgtggccgggcgcgctcccgggcggcggcgcccggctcgacccggggcagtcg 139383 Query: 61 tgggcgctgaacatgcccgcgggtaccgcgggcgccagggtgtggccgcgcaccgggtgc 120 ||| || | | | | |||| || || ||| ||||||| | |||||||||||||| ||| Sbjct: 139382 tggtcgatcagcgtcgccgccggcacaccggccgccaggatctggccgcgcaccggctgc 139323 Query: 121 accttcgacggcagcggccgcggccggtgcatcaccggcgactgcaacggtgtgctggca 180 ||||||||||| |||||||||||| ||| ||| ||||||||| ||| | |||| | Sbjct: 139322 tccttcgacggcgccggccgcggccgctgcgccacgggcgactgcgccggcgcgctgtcc 139263 Query: 181 tgccgggtgtccggccagcagccgaccacgctggccgagtacac 224 ||| || |||||| ||| ||| |||||||||||||||||||| Sbjct: 139262 tgcgccgtctccggcgagccgcccaccacgctggccgagtacac 139219 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Minus Query: 382 tgcgcgagcgcgtgcggcaagttcggcggcgacacctactgctgccg 428 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 139034 tgcgccagcgcgtgcggcaagttcggcggcgacacctactgctgccg 138988 Score = 79.8 bits (40), Expect = 7e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 361 gagctgcaggtgccgggagggtgcgcgagcgcgtgcggcaagttcggcggcgacacctac 420 |||||| ||||| | ||||| |||| ||||||||||||||||||||||||||| ||||| Sbjct: 119544 gagctgaaggtggccggaggctgcgacagcgcgtgcggcaagttcggcggcgacgcctac 119603 Query: 421 tgctgccg 428 |||||||| Sbjct: 119604 tgctgccg 119611 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttcgagcc 302 |||||| |||||||||| ||||||||||||||||||||||| |||||||| |||| Sbjct: 139190 gacttcctcgacctgtcgctcatcgacgggttcaacgtgccggtgagcttccagcc 139135 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttcgagcc 302 |||| |||||||||||| | |||||||||||||||||||||||||||||| |||| Sbjct: 119409 gactacttcgacctgtcactgatcgacgggttcaacgtgccgatgagcttccagcc 119464 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 112 accgggtgcaccttcgacggcagcggccgcggccggtgcatcaccggcgactgcaacggt 171 |||||||||| |||||||||| |||||||||| ||||| ||||||||||||| ||| Sbjct: 115138 accgggtgcagcttcgacggcgccggccgcggcaggtgcgccaccggcgactgcggcggc 115079 Query: 172 gtgctggcatgccgggtgtccggccagcagccgaccacgctggccgagtacaccctggg 230 | |||| | ||| || ||||||| |||| |||| |||||||| |||| ||| ||||| Sbjct: 115078 gcgctgtcgtgcaggctgtccgggcagccgccgctgacgctggcggagttcacgctggg 115020 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 201 gccgaccacgctggccgagtacac 224 |||||||||||||||||||||||| Sbjct: 119348 gccgaccacgctggccgagtacac 119371 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Minus Query: 250 ttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttc 297 |||| |||| |||| || |||||||||||||||||| |||||||||| Sbjct: 80856 ttctacgacgtgtcggtgatcgacgggttcaacgtggggatgagcttc 80809 Score = 44.1 bits (22), Expect = 0.38 Identities = 58/70 (82%) Strand = Plus / Minus Query: 96 cagggtgtggccgcgcaccgggtgcaccttcgacggcagcggccgcggccggtgcatcac 155 |||||||||| ||||| || |||| |||||||||| |||||||||| | ||| ||| Sbjct: 72111 cagggtgtggggccgcacgggctgcagcttcgacggctccggccgcggcagctgcgccac 72052 Query: 156 cggcgactgc 165 |||||||||| Sbjct: 72051 cggcgactgc 72042
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 121 bits (61), Expect = 2e-24 Identities = 139/165 (84%) Strand = Plus / Plus Query: 1 tacacggtgtggccgggcgcgctcccgggtggcggtgtgcgtctcgacccaggccagtcg 60 ||||||||||||||||||||||| || || ||||| ||||| |||||||||||| ||||| Sbjct: 26995954 tacacggtgtggccgggcgcgctgcccggcggcggcgtgcggctcgacccaggcaagtcg 26996013 Query: 61 tgggcgctgaacatgcccgcgggtaccgcgggcgccagggtgtggccgcgcaccgggtgc 120 ||| |||| ||| | |||| || ||| || ||||||| | ||||| |||||||| ||| Sbjct: 26996014 tggacgctcaacgtcgccgccggcaccaaggccgccaggatctggccccgcaccggctgc 26996073 Query: 121 accttcgacggcagcggccgcggccggtgcatcaccggcgactgc 165 |||||||||| |||||||||||| ||| |||||||||||||| Sbjct: 26996074 gacttcgacggcgccggccgcggccgctgcctcaccggcgactgc 26996118 Score = 111 bits (56), Expect = 2e-21 Identities = 182/224 (81%) Strand = Plus / Minus Query: 1 tacacggtgtggccgggcgcgctcccgggtggcggtgtgcgtctcgacccaggccagtcg 60 ||||||||||||||||||||||||||||| ||||| | || |||||||| || |||||| Sbjct: 27017056 tacacggtgtggccgggcgcgctcccgggcggcggcgcccggctcgacccggggcagtcg 27016997 Query: 61 tgggcgctgaacatgcccgcgggtaccgcgggcgccagggtgtggccgcgcaccgggtgc 120 ||| || | | | | |||| || || ||| ||||||| | |||||||||||||| ||| Sbjct: 27016996 tggtcgatcagcgtcgccgccggcacaccggccgccaggatctggccgcgcaccggctgc 27016937 Query: 121 accttcgacggcagcggccgcggccggtgcatcaccggcgactgcaacggtgtgctggca 180 ||||||||||| |||||||||||| ||| ||| ||||||||| ||| | |||| | Sbjct: 27016936 tccttcgacggcgccggccgcggccgctgcgccacgggcgactgcgccggcgcgctgtcc 27016877 Query: 181 tgccgggtgtccggccagcagccgaccacgctggccgagtacac 224 ||| || |||||| ||| ||| |||||||||||||||||||| Sbjct: 27016876 tgcgccgtctccggcgagccgcccaccacgctggccgagtacac 27016833 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Minus Query: 382 tgcgcgagcgcgtgcggcaagttcggcggcgacacctactgctgccg 428 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 27016648 tgcgccagcgcgtgcggcaagttcggcggcgacacctactgctgccg 27016602 Score = 79.8 bits (40), Expect = 7e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 361 gagctgcaggtgccgggagggtgcgcgagcgcgtgcggcaagttcggcggcgacacctac 420 |||||| ||||| | ||||| |||| ||||||||||||||||||||||||||| ||||| Sbjct: 26996350 gagctgaaggtggccggaggctgcgacagcgcgtgcggcaagttcggcggcgacgcctac 26996409 Query: 421 tgctgccg 428 |||||||| Sbjct: 26996410 tgctgccg 26996417 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttcgagcc 302 |||||| |||||||||| ||||||||||||||||||||||| |||||||| |||| Sbjct: 27016804 gacttcctcgacctgtcgctcatcgacgggttcaacgtgccggtgagcttccagcc 27016749 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttcgagcc 302 |||| |||||||||||| | |||||||||||||||||||||||||||||| |||| Sbjct: 26996215 gactacttcgacctgtcactgatcgacgggttcaacgtgccgatgagcttccagcc 26996270 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 112 accgggtgcaccttcgacggcagcggccgcggccggtgcatcaccggcgactgcaacggt 171 |||||||||| |||||||||| |||||||||| ||||| ||||||||||||| ||| Sbjct: 26991944 accgggtgcagcttcgacggcgccggccgcggcaggtgcgccaccggcgactgcggcggc 26991885 Query: 172 gtgctggcatgccgggtgtccggccagcagccgaccacgctggccgagtacaccctggg 230 | |||| | ||| || ||||||| |||| |||| |||||||| |||| ||| ||||| Sbjct: 26991884 gcgctgtcgtgcaggctgtccgggcagccgccgctgacgctggcggagttcacgctggg 26991826 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 201 gccgaccacgctggccgagtacac 224 |||||||||||||||||||||||| Sbjct: 26996154 gccgaccacgctggccgagtacac 26996177 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Minus Query: 250 ttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttc 297 |||| |||| |||| || |||||||||||||||||| |||||||||| Sbjct: 26957412 ttctacgacgtgtcggtgatcgacgggttcaacgtggggatgagcttc 26957365 Score = 44.1 bits (22), Expect = 0.38 Identities = 58/70 (82%) Strand = Plus / Minus Query: 96 cagggtgtggccgcgcaccgggtgcaccttcgacggcagcggccgcggccggtgcatcac 155 |||||||||| ||||| || |||| |||||||||| |||||||||| | ||| ||| Sbjct: 26947144 cagggtgtggggccgcacgggctgcagcttcgacggctccggccgcggcagctgcgccac 26947085 Query: 156 cggcgactgc 165 |||||||||| Sbjct: 26947084 cggcgactgc 26947075
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 121 bits (61), Expect = 2e-24 Identities = 139/165 (84%) Strand = Plus / Plus Query: 1 tacacggtgtggccgggcgcgctcccgggtggcggtgtgcgtctcgacccaggccagtcg 60 ||||||||||||||||||||||| || || ||||| ||||| |||||||||||| ||||| Sbjct: 26922351 tacacggtgtggccgggcgcgctgcccggcggcggcgtgcggctcgacccaggcaagtcg 26922410 Query: 61 tgggcgctgaacatgcccgcgggtaccgcgggcgccagggtgtggccgcgcaccgggtgc 120 ||| |||| ||| | |||| || ||| || ||||||| | ||||| |||||||| ||| Sbjct: 26922411 tggacgctcaacgtcgccgccggcaccaaggccgccaggatctggccccgcaccggctgc 26922470 Query: 121 accttcgacggcagcggccgcggccggtgcatcaccggcgactgc 165 |||||||||| |||||||||||| ||| |||||||||||||| Sbjct: 26922471 gacttcgacggcgccggccgcggccgctgcctcaccggcgactgc 26922515 Score = 111 bits (56), Expect = 2e-21 Identities = 182/224 (81%) Strand = Plus / Minus Query: 1 tacacggtgtggccgggcgcgctcccgggtggcggtgtgcgtctcgacccaggccagtcg 60 ||||||||||||||||||||||||||||| ||||| | || |||||||| || |||||| Sbjct: 26942645 tacacggtgtggccgggcgcgctcccgggcggcggcgcccggctcgacccggggcagtcg 26942586 Query: 61 tgggcgctgaacatgcccgcgggtaccgcgggcgccagggtgtggccgcgcaccgggtgc 120 ||| || | | | | |||| || || ||| ||||||| | |||||||||||||| ||| Sbjct: 26942585 tggtcgatcagcgtcgccgccggcacaccggccgccaggatctggccgcgcaccggctgc 26942526 Query: 121 accttcgacggcagcggccgcggccggtgcatcaccggcgactgcaacggtgtgctggca 180 ||||||||||| |||||||||||| ||| ||| ||||||||| ||| | |||| | Sbjct: 26942525 tccttcgacggcgccggccgcggccgctgcgccacgggcgactgcgccggcgcgctgtcc 26942466 Query: 181 tgccgggtgtccggccagcagccgaccacgctggccgagtacac 224 ||| || |||||| ||| ||| |||||||||||||||||||| Sbjct: 26942465 tgcgccgtctccggcgagccgcccaccacgctggccgagtacac 26942422 Score = 85.7 bits (43), Expect = 1e-13 Identities = 46/47 (97%) Strand = Plus / Minus Query: 382 tgcgcgagcgcgtgcggcaagttcggcggcgacacctactgctgccg 428 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 26942237 tgcgccagcgcgtgcggcaagttcggcggcgacacctactgctgccg 26942191 Score = 79.8 bits (40), Expect = 7e-12 Identities = 61/68 (89%) Strand = Plus / Plus Query: 361 gagctgcaggtgccgggagggtgcgcgagcgcgtgcggcaagttcggcggcgacacctac 420 |||||| ||||| | ||||| |||| ||||||||||||||||||||||||||| ||||| Sbjct: 26922747 gagctgaaggtggccggaggctgcgacagcgcgtgcggcaagttcggcggcgacgcctac 26922806 Query: 421 tgctgccg 428 |||||||| Sbjct: 26922807 tgctgccg 26922814 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttcgagcc 302 |||||| |||||||||| ||||||||||||||||||||||| |||||||| |||| Sbjct: 26942393 gacttcctcgacctgtcgctcatcgacgggttcaacgtgccggtgagcttccagcc 26942338 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttcgagcc 302 |||| |||||||||||| | |||||||||||||||||||||||||||||| |||| Sbjct: 26922612 gactacttcgacctgtcactgatcgacgggttcaacgtgccgatgagcttccagcc 26922667 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Minus Query: 112 accgggtgcaccttcgacggcagcggccgcggccggtgcatcaccggcgactgcaacggt 171 |||||||||| |||||||||| |||||||||| ||||| ||||||||||||| ||| Sbjct: 26918341 accgggtgcagcttcgacggcgccggccgcggcaggtgcgccaccggcgactgcggcggc 26918282 Query: 172 gtgctggcatgccgggtgtccggccagcagccgaccacgctggccgagtacaccctggg 230 | |||| | ||| || ||||||| |||| |||| |||||||| |||| ||| ||||| Sbjct: 26918281 gcgctgtcgtgcaggctgtccgggcagccgccgctgacgctggcggagttcacgctggg 26918223 Score = 48.1 bits (24), Expect = 0.025 Identities = 24/24 (100%) Strand = Plus / Plus Query: 201 gccgaccacgctggccgagtacac 224 |||||||||||||||||||||||| Sbjct: 26922551 gccgaccacgctggccgagtacac 26922574 Score = 48.1 bits (24), Expect = 0.025 Identities = 42/48 (87%) Strand = Plus / Minus Query: 250 ttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttc 297 |||| |||| |||| || |||||||||||||||||| |||||||||| Sbjct: 26884059 ttctacgacgtgtcggtgatcgacgggttcaacgtggggatgagcttc 26884012 Score = 44.1 bits (22), Expect = 0.38 Identities = 58/70 (82%) Strand = Plus / Minus Query: 96 cagggtgtggccgcgcaccgggtgcaccttcgacggcagcggccgcggccggtgcatcac 155 |||||||||| ||||| || |||| |||||||||| |||||||||| | ||| ||| Sbjct: 26875314 cagggtgtggggccgcacgggctgcagcttcgacggctccggccgcggcagctgcgccac 26875255 Query: 156 cggcgactgc 165 |||||||||| Sbjct: 26875254 cggcgactgc 26875245
>emb|AL731597.3|OSJN00237 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0023J03, complete sequence Length = 175555 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 382 tgcgcgagcgcgtgcggcaagttcggcggcgacacctactgctgccgtggccagtt 437 ||||| || ||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 63064 tgcgccagtgcgtgcgacaagttcggcggcgacacctactgctgccggggccagtt 63009 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttcgag 300 |||||| |||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 63224 gacttcctcgacctgtcgctcatcgacgggttcaacgtgccggtgagcttcgag 63171
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 79.8 bits (40), Expect = 7e-12 Identities = 52/56 (92%) Strand = Plus / Minus Query: 382 tgcgcgagcgcgtgcggcaagttcggcggcgacacctactgctgccgtggccagtt 437 ||||| || ||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct: 13849405 tgcgccagtgcgtgcgacaagttcggcggcgacacctactgctgccggggccagtt 13849350 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttcgag 300 |||||| |||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct: 13849565 gacttcctcgacctgtcgctcatcgacgggttcaacgtgccggtgagcttcgag 13849512 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 ggcggtgtgcgtctcgacccaggc 54 ||||||||||| |||||||||||| Sbjct: 27391283 ggcggtgtgcgcctcgacccaggc 27391260 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 tcgacgggttcaacgtgccg 288 |||||||||||||||||||| Sbjct: 4391929 tcgacgggttcaacgtgccg 4391910
>ref|XM_482119.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1113 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/62 (90%), Gaps = 2/62 (3%) Strand = Plus / Plus Query: 382 tgcgcgagcgcgtgcggcaagttcggcg--gcgacacctactgctgccgtggccagtttg 439 ||||| || ||||||||||||||||||| ||||||||||||||| ||| |||||||||| Sbjct: 362 tgcgccagtgcgtgcggcaagttcggcgcggcgacacctactgctaccggggccagtttg 421 Query: 440 ag 441 || Sbjct: 422 ag 423
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/62 (90%), Gaps = 2/62 (3%) Strand = Plus / Plus Query: 382 tgcgcgagcgcgtgcggcaagttcggcg--gcgacacctactgctgccgtggccagtttg 439 ||||| || ||||||||||||||||||| ||||||||||||||| ||| |||||||||| Sbjct: 17981076 tgcgccagtgcgtgcggcaagttcggcgcggcgacacctactgctaccggggccagtttg 17981135 Query: 440 ag 441 || Sbjct: 17981136 ag 17981137
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/58 (91%), Gaps = 2/58 (3%) Strand = Plus / Minus Query: 382 tgcgcgagcgcgtgcggcaagttcggcg--gcgacacctactgctgccgtggccagtt 437 ||||| || ||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 6616662 tgcgccagtgcgtgcggcaagttcggcgcggcgacacctactgctgccggggccagtt 6616605 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 122 ccttcgacggcagcggccgcggccggtgcatcaccggcgactgc 165 ||||||||||||||||||||||||| ||| |||| ||||||||| Sbjct: 6616960 ccttcgacggcagcggccgcggccgctgcgtcacgggcgactgc 6616917 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 27 gggtggcggtgtgcgtctcgacccaggccagtcgtgggcgct 68 ||||||||| |||| |||||||||||| ||||||||||||| Sbjct: 738083 gggtggcggcatgcggctcgacccaggcgagtcgtgggcgct 738124
>dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0483F08 Length = 148985 Score = 69.9 bits (35), Expect = 7e-09 Identities = 53/58 (91%), Gaps = 2/58 (3%) Strand = Plus / Minus Query: 382 tgcgcgagcgcgtgcggcaagttcggcg--gcgacacctactgctgccgtggccagtt 437 ||||| || ||||||||||||||||||| ||||||||||||||||||| |||||||| Sbjct: 96833 tgcgccagtgcgtgcggcaagttcggcgcggcgacacctactgctgccggggccagtt 96776 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 122 ccttcgacggcagcggccgcggccggtgcatcaccggcgactgc 165 ||||||||||||||||||||||||| ||| |||| ||||||||| Sbjct: 97131 ccttcgacggcagcggccgcggccgctgcgtcacgggcgactgc 97088
>dbj|AP005489.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0013H03 Length = 152998 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/62 (90%), Gaps = 2/62 (3%) Strand = Plus / Plus Query: 382 tgcgcgagcgcgtgcggcaagttcggcg--gcgacacctactgctgccgtggccagtttg 439 ||||| || ||||||||||||||||||| ||||||||||||||| ||| |||||||||| Sbjct: 66111 tgcgccagtgcgtgcggcaagttcggcgcggcgacacctactgctaccggggccagtttg 66170 Query: 440 ag 441 || Sbjct: 66171 ag 66172
>gb|AY112407.1| Zea mays CL3918_1 mRNA sequence Length = 724 Score = 65.9 bits (33), Expect = 1e-07 Identities = 60/69 (86%) Strand = Plus / Plus Query: 368 aggtgccgggagggtgcgcgagcgcgtgcggcaagttcggcggcgacacctactgctgcc 427 ||||||| || || ||||| ||||| |||| ||| |||||||||||||||||||||||| Sbjct: 238 aggtgcccggcggctgcgccagcgcctgcgagaagctcggcggcgacacctactgctgcc 297 Query: 428 gtggccagt 436 | ||||||| Sbjct: 298 ggggccagt 306 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 123 cttcgacggcagcggccgcgg 143 ||||||||||||||||||||| Sbjct: 2 cttcgacggcagcggccgcgg 22
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 122 ccttcgacggcagcggccgcggccggtgcatcaccggcgactgc 165 ||||||||||||||||||||||||| ||| |||| ||||||||| Sbjct: 6945296 ccttcgacggcagcggccgcggccgctgcgtcacgggcgactgc 6945339 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/58 (89%), Gaps = 2/58 (3%) Strand = Plus / Plus Query: 382 tgcgcgagcgcgtgcggcaagttcggcg--gcgacacctactgctgccgtggccagtt 437 ||||| || ||||||||||||||||||| |||||||| |||||||||| |||||||| Sbjct: 6945577 tgcgctagtgcgtgcggcaagttcggcgcggcgacaccaactgctgccggggccagtt 6945634 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccg 288 |||||| |||||||||| || |||||||||||||||||||| Sbjct: 6945435 gacttcctcgacctgtcgctcgtcgacgggttcaacgtgccg 6945476 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 263 ccgtcatcgacgggttcaacgtgccgatgagctt 296 ||||||||||||| |||||| ||||| ||||||| Sbjct: 1158609 ccgtcatcgacggcttcaacatgccggtgagctt 1158576
>dbj|AP005522.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0479H10 Length = 139874 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 122 ccttcgacggcagcggccgcggccggtgcatcaccggcgactgc 165 ||||||||||||||||||||||||| ||| |||| ||||||||| Sbjct: 134821 ccttcgacggcagcggccgcggccgctgcgtcacgggcgactgc 134864 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/58 (89%), Gaps = 2/58 (3%) Strand = Plus / Plus Query: 382 tgcgcgagcgcgtgcggcaagttcggcg--gcgacacctactgctgccgtggccagtt 437 ||||| || ||||||||||||||||||| |||||||| |||||||||| |||||||| Sbjct: 135102 tgcgctagtgcgtgcggcaagttcggcgcggcgacaccaactgctgccggggccagtt 135159 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccg 288 |||||| |||||||||| || |||||||||||||||||||| Sbjct: 134960 gacttcctcgacctgtcgctcgtcgacgggttcaacgtgccg 135001
>dbj|AP004785.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0061B07 Length = 124766 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 122 ccttcgacggcagcggccgcggccggtgcatcaccggcgactgc 165 ||||||||||||||||||||||||| ||| |||| ||||||||| Sbjct: 4723 ccttcgacggcagcggccgcggccgctgcgtcacgggcgactgc 4766 Score = 61.9 bits (31), Expect = 2e-06 Identities = 52/58 (89%), Gaps = 2/58 (3%) Strand = Plus / Plus Query: 382 tgcgcgagcgcgtgcggcaagttcggcg--gcgacacctactgctgccgtggccagtt 437 ||||| || ||||||||||||||||||| |||||||| |||||||||| |||||||| Sbjct: 5004 tgcgctagtgcgtgcggcaagttcggcgcggcgacaccaactgctgccggggccagtt 5061 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccg 288 |||||| |||||||||| || |||||||||||||||||||| Sbjct: 4862 gacttcctcgacctgtcgctcgtcgacgggttcaacgtgccg 4903
>dbj|AK069182.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009L15, full insert sequence Length = 693 Score = 61.9 bits (31), Expect = 2e-06 Identities = 97/119 (81%) Strand = Plus / Plus Query: 112 accgggtgcaccttcgacggcagcggccgcggccggtgcatcaccggcgactgcaacggt 171 |||||||||| |||||||||| |||||||||| ||||| ||||||||||||| ||| Sbjct: 281 accgggtgcagcttcgacggcgccggccgcggcaggtgcgccaccggcgactgcggcggc 340 Query: 172 gtgctggcatgccgggtgtccggccagcagccgaccacgctggccgagtacaccctggg 230 | |||| | ||| || ||||||| |||| |||| |||||||| |||| ||| ||||| Sbjct: 341 gcgctgtcgtgcaggctgtccgggcagccgccgctgacgctggcggagttcacgctggg 399
>gb|AY105654.1| Zea mays PCO151032 mRNA sequence Length = 926 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttc 297 |||||||||||| | ||| |||||||||| ||||||||||| ||||||||| Sbjct: 368 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttc 418
>gb|U06831.1|ZMU06831 Zea mays B73 antifungal zeamatin-like protein mRNA, complete cds Length = 957 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttc 297 |||||||||||| | ||| |||||||||| ||||||||||| ||||||||| Sbjct: 371 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttc 421
>gb|DQ147030.1| Zea diploperennis isolate d8 zeamatin-like protein (zlp) gene, complete cds Length = 913 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttc 297 |||||||||||| | ||| |||||||||| ||||||||||| ||||||||| Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttc 410
>gb|DQ147029.1| Zea diploperennis isolate d7 zeamatin-like protein (zlp) gene, complete cds Length = 901 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttc 297 |||||||||||| | ||| |||||||||| ||||||||||| ||||||||| Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttc 410
>gb|DQ147028.1| Zea diploperennis isolate d6 zeamatin-like protein (zlp) gene, complete cds Length = 730 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttc 297 |||||||||||| | ||| |||||||||| ||||||||||| ||||||||| Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttc 410
>gb|DQ147027.1| Zea diploperennis isolate d5 zeamatin-like protein (zlp) gene, complete cds Length = 907 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttc 297 |||||||||||| | ||| |||||||||| ||||||||||| ||||||||| Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttc 410
>gb|DQ147026.1| Zea diploperennis isolate d4 zeamatin-like protein (zlp) gene, complete cds Length = 730 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttc 297 |||||||||||| | ||| |||||||||| ||||||||||| ||||||||| Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttc 410
>gb|DQ147025.1| Zea diploperennis isolate d3 zeamatin-like protein (zlp) gene, complete cds Length = 730 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttc 297 |||||||||||| | ||| |||||||||| ||||||||||| ||||||||| Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttc 410
>gb|DQ147024.1| Zea diploperennis isolate d2 zeamatin-like protein (zlp) gene, complete cds Length = 724 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttc 297 |||||||||||| | ||| |||||||||| ||||||||||| ||||||||| Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttc 410
>gb|DQ147023.1| Zea diploperennis isolate d1 zeamatin-like protein (zlp) gene, complete cds Length = 907 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttc 297 |||||||||||| | ||| |||||||||| ||||||||||| ||||||||| Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttc 410
>gb|DQ147022.1| Zea mays subsp. parviglumis isolate p15 zeamatin-like protein (zlp) gene, complete cds Length = 730 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttc 297 |||||||||||| | ||| |||||||||| ||||||||||| ||||||||| Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttc 410
>gb|DQ147021.1| Zea mays subsp. parviglumis isolate p14b zeamatin-like protein (zlp) gene, complete cds Length = 733 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttc 297 |||||||||||| | ||| |||||||||| ||||||||||| ||||||||| Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttc 410
>gb|DQ147020.1| Zea mays subsp. parviglumis isolate p14 zeamatin-like protein (zlp) gene, complete cds Length = 730 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttc 297 |||||||||||| | ||| |||||||||| ||||||||||| ||||||||| Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttc 410
>gb|DQ147019.1| Zea mays subsp. parviglumis isolate p12 zeamatin-like protein (zlp) gene, complete cds Length = 730 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttc 297 |||||||||||| | ||| |||||||||| ||||||||||| ||||||||| Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttc 410
>gb|DQ147018.1| Zea mays subsp. parviglumis isolate p11 zeamatin-like protein (zlp) gene, complete cds Length = 730 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttc 297 |||||||||||| | ||| |||||||||| ||||||||||| ||||||||| Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttc 410
>gb|DQ147017.1| Zea mays subsp. parviglumis isolate p9 zeamatin-like protein (zlp) gene, complete cds Length = 730 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttc 297 |||||||||||| | ||| |||||||||| ||||||||||| ||||||||| Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttc 410
>gb|DQ147016.1| Zea mays subsp. parviglumis isolate p8 zeamatin-like protein (zlp) gene, complete cds Length = 730 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttc 297 |||||||||||| | ||| |||||||||| ||||||||||| ||||||||| Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttc 410
>gb|DQ147015.1| Zea mays subsp. parviglumis isolate p6 zeamatin-like protein (zlp) gene, complete cds Length = 890 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttc 297 |||||||||||| | ||| |||||||||| ||||||||||| ||||||||| Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttc 410
>gb|DQ147014.1| Zea mays subsp. parviglumis isolate p13 zeamatin-like protein (zlp) gene, complete cds Length = 916 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttc 297 |||||||||||| | ||| |||||||||| ||||||||||| ||||||||| Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttc 410
>gb|DQ147013.1| Zea mays subsp. parviglumis isolate p4 zeamatin-like protein (zlp) gene, complete cds Length = 892 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttc 297 |||||||||||| | ||| |||||||||| ||||||||||| ||||||||| Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttc 410
>gb|DQ147012.1| Zea mays subsp. parviglumis isolate p5 zeamatin-like protein (zlp) gene, complete cds Length = 901 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttc 297 |||||||||||| | ||| |||||||||| ||||||||||| ||||||||| Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttc 410
>gb|DQ147011.1| Zea mays subsp. parviglumis isolate p3 zeamatin-like protein (zlp) gene, complete cds Length = 907 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttc 297 |||||||||||| | ||| |||||||||| ||||||||||| ||||||||| Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttc 410
>gb|DQ147010.1| Zea mays subsp. parviglumis isolate p2 zeamatin-like protein (zlp) gene, complete cds Length = 916 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttc 297 |||||||||||| | ||| |||||||||| ||||||||||| ||||||||| Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttc 410
>gb|DQ147009.1| Zea mays subsp. parviglumis isolate p1 zeamatin-like protein (zlp) gene, complete cds Length = 916 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttc 297 |||||||||||| | ||| |||||||||| ||||||||||| ||||||||| Sbjct: 360 gacttcttcgacatctccctcatcgacggcttcaacgtgcccatgagcttc 410
>ref|XM_471730.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1302 Score = 60.0 bits (30), Expect = 6e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccg 288 |||||| |||||||||| ||||||||||||||||||||||| Sbjct: 255 gacttcctcgacctgtcgctcatcgacgggttcaacgtgccg 296
>dbj|AB212218.1| Cryptomeria japonica Cry j 3.7 mRNA for thaumatin-like protein, complete cds Length = 824 Score = 54.0 bits (27), Expect = 4e-04 Identities = 27/27 (100%) Strand = Plus / Plus Query: 202 ccgaccacgctggccgagtacaccctg 228 ||||||||||||||||||||||||||| Sbjct: 332 ccgaccacgctggccgagtacaccctg 358
>gb|AF016328.1|AF016328 Hordeum vulgare Barperm2 (perm2) mRNA, partial cds Length = 601 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgccgatgagcttc 297 ||||||| |||| | ||| || ||||||| ||||||||||||||||||||| Sbjct: 201 gacttctacgacatctccctcgtcgacggattcaacgtgccgatgagcttc 251
>dbj|AP003338.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1212_B09 Length = 130728 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 27 gggtggcggtgtgcgtctcgacccaggccagtcgtgggcgct 68 ||||||||| |||| |||||||||||| ||||||||||||| Sbjct: 15283 gggtggcggcatgcggctcgacccaggcgagtcgtgggcgct 15324
>dbj|AP003219.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032H19 Length = 126434 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 27 gggtggcggtgtgcgtctcgacccaggccagtcgtgggcgct 68 ||||||||| |||| |||||||||||| ||||||||||||| Sbjct: 121827 gggtggcggcatgcggctcgacccaggcgagtcgtgggcgct 121868
>dbj|AK106707.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-E12, full insert sequence Length = 2110 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 27 gggtggcggtgtgcgtctcgacccaggccagtcgtgggcgct 68 ||||||||| |||| |||||||||||| ||||||||||||| Sbjct: 1776 gggtggcggcatgcggctcgacccaggcgagtcgtgggcgct 1735
>gb|DQ277012.1| Ficus awkeotsang thaumatin-like protein isoform 2 mRNA, complete cds Length = 926 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 254 tcgacctgtccgtcatcgacgggttcaacgtgccgatg 291 ||||| |||| |||||||||||||||||||| |||||| Sbjct: 372 tcgacatgtcggtcatcgacgggttcaacgttccgatg 409
>ref|XM_469149.1| Oryza sativa (japonica cultivar-group), mRNA Length = 909 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgcc 287 |||||||||||| | ||| |||||||||| ||||||||||| Sbjct: 343 gacttcttcgacatctccctcatcgacggattcaacgtgcc 383 Score = 46.1 bits (23), Expect = 0.097 Identities = 35/39 (89%) Strand = Plus / Plus Query: 100 gtgtggccgcgcaccgggtgcaccttcgacggcagcggc 138 |||||| ||||||| || |||| |||||||||||||||| Sbjct: 196 gtgtgggcgcgcacgggctgcagcttcgacggcagcggc 234
>ref|XM_469137.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1248 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgcc 287 |||||||||||| | ||| |||||||||| ||||||||||| Sbjct: 593 gacttcttcgacatctccctcatcgacggcttcaacgtgcc 633
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgcc 287 |||||||||||| | ||| |||||||||| ||||||||||| Sbjct: 25748604 gacttcttcgacatctccctcatcgacggattcaacgtgcc 25748564 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgcc 287 |||||||||||| | ||| |||||||||| ||||||||||| Sbjct: 25686499 gacttcttcgacatctccctcatcgacggcttcaacgtgcc 25686459 Score = 46.1 bits (23), Expect = 0.097 Identities = 35/39 (89%) Strand = Plus / Minus Query: 100 gtgtggccgcgcaccgggtgcaccttcgacggcagcggc 138 |||||| ||||||| || |||| |||||||||||||||| Sbjct: 25748751 gtgtgggcgcgcacgggctgcagcttcgacggcagcggc 25748713 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Minus Query: 105 gccgcgcaccgggtgcaccttcgacggcagcggccgcg 142 ||||||||| | ||| ||||||||||||||||||||| Sbjct: 10835557 gccgcgcacgagctgctccttcgacggcagcggccgcg 10835520
>gb|AC137991.3| Oryza sativa chromosome 3 BAC OSJNBa0034D21 genomic sequence, complete sequence Length = 190834 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgcc 287 |||||||||||| | ||| |||||||||| ||||||||||| Sbjct: 158397 gacttcttcgacatctccctcatcgacggcttcaacgtgcc 158437 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgcc 287 |||||||||||| | ||| |||||||||| ||||||||||| Sbjct: 96292 gacttcttcgacatctccctcatcgacggattcaacgtgcc 96332 Score = 46.1 bits (23), Expect = 0.097 Identities = 35/39 (89%) Strand = Plus / Plus Query: 100 gtgtggccgcgcaccgggtgcaccttcgacggcagcggc 138 |||||| ||||||| || |||| |||||||||||||||| Sbjct: 96145 gtgtgggcgcgcacgggctgcagcttcgacggcagcggc 96183
>gb|AC139174.3| Oryza sativa chromosome 3 BAC OSJNBb0065L20 genomic sequence, complete sequence Length = 167427 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgcc 287 |||||||||||| | ||| |||||||||| ||||||||||| Sbjct: 15856 gacttcttcgacatctccctcatcgacggcttcaacgtgcc 15896
>gb|AC079888.10| Oryza sativa chromosome 10 BAC OSJNBa0078O01 genomic sequence, complete sequence Length = 146664 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 264 cgtcatcgacgggttcaacgtgccgatgagctt 296 |||||||||||| |||||||||||| ||||||| Sbjct: 95295 cgtcatcgacggcttcaacgtgccggtgagctt 95263 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 138 ccgcggccggtgcatcaccggcgactgc 165 |||||||| |||||||||||||||||| Sbjct: 95395 ccgcggccactgcatcaccggcgactgc 95368
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 264 cgtcatcgacgggttcaacgtgccgatgagctt 296 |||||||||||| |||||||||||| ||||||| Sbjct: 18591484 cgtcatcgacggcttcaacgtgccggtgagctt 18591452 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 138 ccgcggccggtgcatcaccggcgactgc 165 |||||||| |||||||||||||||||| Sbjct: 18591584 ccgcggccactgcatcaccggcgactgc 18591557
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgcc 287 |||||||||||| | ||| |||||||||| ||||||||||| Sbjct: 25839913 gacttcttcgacatctccctcatcgacggattcaacgtgcc 25839873 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgcc 287 |||||||||||| | ||| |||||||||| ||||||||||| Sbjct: 25777804 gacttcttcgacatctccctcatcgacggcttcaacgtgcc 25777764 Score = 46.1 bits (23), Expect = 0.097 Identities = 35/39 (89%) Strand = Plus / Minus Query: 100 gtgtggccgcgcaccgggtgcaccttcgacggcagcggc 138 |||||| ||||||| || |||| |||||||||||||||| Sbjct: 25840060 gtgtgggcgcgcacgggctgcagcttcgacggcagcggc 25840022 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Minus Query: 105 gccgcgcaccgggtgcaccttcgacggcagcggccgcg 142 ||||||||| | ||| ||||||||||||||||||||| Sbjct: 10833658 gccgcgcacgagctgctccttcgacggcagcggccgcg 10833621
>dbj|AK058637.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-D06, full insert sequence Length = 1119 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgcc 287 |||||||||||| | ||| |||||||||| ||||||||||| Sbjct: 593 gacttcttcgacatctccctcatcgacggcttcaacgtgcc 633
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 50.1 bits (25), Expect = 0.006 Identities = 31/33 (93%) Strand = Plus / Minus Query: 264 cgtcatcgacgggttcaacgtgccgatgagctt 296 |||||||||||| |||||||||||| ||||||| Sbjct: 18602337 cgtcatcgacggcttcaacgtgccggtgagctt 18602305 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Minus Query: 138 ccgcggccggtgcatcaccggcgactgc 165 |||||||| |||||||||||||||||| Sbjct: 18602437 ccgcggccactgcatcaccggcgactgc 18602410
>gb|U77657.1|OSU77657 Oryza sativa pathogenesis-related thaumatin-like protein mRNA, complete cds Length = 1049 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgcc 287 |||||||||||| | ||| |||||||||| ||||||||||| Sbjct: 398 gacttcttcgacatctccctcatcgacggcttcaacgtgcc 438
>gb|U77656.1|OSU77656 Oryza sativa pathogenesis-related thaumatin-like protein mRNA, complete cds Length = 882 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaacgtgcc 287 |||||||||||| | ||| |||||||||| ||||||||||| Sbjct: 322 gacttcttcgacatctccctcatcgacggattcaacgtgcc 362 Score = 46.1 bits (23), Expect = 0.097 Identities = 35/39 (89%) Strand = Plus / Plus Query: 100 gtgtggccgcgcaccgggtgcaccttcgacggcagcggc 138 |||||| ||||||| || |||| |||||||||||||||| Sbjct: 175 gtgtgggcgcgcacgggctgcagcttcgacggcagcggc 213
>dbj|AP006148.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT41D09, TM0304, complete sequence Length = 114776 Score = 48.1 bits (24), Expect = 0.025 Identities = 54/64 (84%) Strand = Plus / Minus Query: 109 cgcaccgggtgcaccttcgacggcagcggccgcggccggtgcatcaccggcgactgcaac 168 ||||||||||||| ||||||||| ||||||||||||||| ||||| ||||||| | Sbjct: 73090 cgcaccgggtgcaacttcgacggtgctggccgcggccggtgccagaccggagactgcacc 73031 Query: 169 ggtg 172 |||| Sbjct: 73030 ggtg 73027
>ref|XM_549893.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1806 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Plus Query: 38 tgcgtctcgacccaggccagtcgtgggcgct 68 |||| |||||||||||| ||||||||||||| Sbjct: 2 tgcggctcgacccaggcgagtcgtgggcgct 32
>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence Length = 642517 Score = 46.1 bits (23), Expect = 0.097 Identities = 29/31 (93%) Strand = Plus / Minus Query: 150 catcaccggcgactgcaacggtgtgctggca 180 |||| |||||||||| ||||||||||||||| Sbjct: 260678 catccccggcgactgaaacggtgtgctggca 260648
>gb|AF355458.1|AF355458 Hordeum vulgare thaumatin-like protein TLP8 mRNA, complete cds Length = 947 Score = 46.1 bits (23), Expect = 0.097 Identities = 38/43 (88%) Strand = Plus / Plus Query: 245 aggacttcttcgacctgtccgtcatcgacgggttcaacgtgcc 287 |||||||||||||| | ||| | |||||||||| ||||||||| Sbjct: 415 aggacttcttcgacatctccctgatcgacgggtacaacgtgcc 457
>emb|Y14658.1|HBRNAM12 Hordeum vulgare mRNA for m12 protein Length = 1889 Score = 46.1 bits (23), Expect = 0.097 Identities = 38/43 (88%) Strand = Plus / Plus Query: 245 aggacttcttcgacctgtccgtcatcgacgggttcaacgtgcc 287 |||||||||||||| | ||| | |||||||||| ||||||||| Sbjct: 1324 aggacttcttcgacatctccctgatcgacgggtacaacgtgcc 1366
>gb|AC135908.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1275B08, from chromosome 3, complete sequence Length = 108833 Score = 44.1 bits (22), Expect = 0.38 Identities = 34/38 (89%) Strand = Plus / Plus Query: 105 gccgcgcaccgggtgcaccttcgacggcagcggccgcg 142 ||||||||| | ||| ||||||||||||||||||||| Sbjct: 19330 gccgcgcacgagctgctccttcgacggcagcggccgcg 19367
>emb|X68197.1|OSTHLP O.sativa mRNA for thaumatin-like protein Length = 681 Score = 44.1 bits (22), Expect = 0.38 Identities = 58/70 (82%) Strand = Plus / Plus Query: 96 cagggtgtggccgcgcaccgggtgcaccttcgacggcagcggccgcggccggtgcatcac 155 |||||||||| ||||| || |||| |||||||||| |||||||||| | ||| ||| Sbjct: 235 cagggtgtggggccgcacgggctgcagcttcgacggctccggccgcggcagctgcgccac 294 Query: 156 cggcgactgc 165 |||||||||| Sbjct: 295 cggcgactgc 304
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 395 gcggcaagttcggcggcgacacctac 420 |||||||||||||||||||| ||||| Sbjct: 3641487 gcggcaagttcggcggcgacgcctac 3641512
>gb|AC104446.2| Homo sapiens chromosome 3 clone RP11-447A21, complete sequence Length = 186734 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 126 cgacggcagcggccgcggccgg 147 |||||||||||||||||||||| Sbjct: 138623 cgacggcagcggccgcggccgg 138602
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Plus Query: 124 ttcgacggcagcggccgcggcc 145 |||||||||||||||||||||| Sbjct: 5177496 ttcgacggcagcggccgcggcc 5177517
>dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0660D08 Length = 146915 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 263 ccgtcatcgacgggttcaacgtgccgatgagctt 296 ||||||||||||| |||||| ||||| ||||||| Sbjct: 134832 ccgtcatcgacggcttcaacatgccggtgagctt 134799
>dbj|AP003456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0542E10 Length = 146196 Score = 44.1 bits (22), Expect = 0.38 Identities = 31/34 (91%) Strand = Plus / Minus Query: 263 ccgtcatcgacgggttcaacgtgccgatgagctt 296 ||||||||||||| |||||| ||||| ||||||| Sbjct: 10562 ccgtcatcgacggcttcaacatgccggtgagctt 10529
>ref|NM_197206.1| Oryza sativa (japonica cultivar-group) hypothetical protein (OSJNBa0078O01.27), mRNA Length = 174 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 264 cgtcatcgacgggttcaacgtgccg 288 |||||||||||| |||||||||||| Sbjct: 63 cgtcatcgacggcttcaacgtgccg 87
>gb|AC090900.3| Drosophila melanogaster clone BACR30C07, complete sequence Length = 186286 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 348 ggattgcctcaaggagctgcaggtg 372 ||||| ||||||||||||||||||| Sbjct: 126232 ggattacctcaaggagctgcaggtg 126256
>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29 Length = 295150 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 94 gccagggtgtggccgcgcacc 114 ||||||||||||||||||||| Sbjct: 211572 gccagggtgtggccgcgcacc 211592
>ref|NM_137171.2| Drosophila melanogaster CG7544-RA (CG7544), mRNA Length = 1570 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 348 ggattgcctcaaggagctgcaggtg 372 ||||| ||||||||||||||||||| Sbjct: 884 ggattacctcaaggagctgcaggtg 908
>gb|AY058680.1| Drosophila melanogaster LD39460 full length cDNA Length = 1528 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 348 ggattgcctcaaggagctgcaggtg 372 ||||| ||||||||||||||||||| Sbjct: 824 ggattacctcaaggagctgcaggtg 848
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 395 gcggcaagttcggcggcgacaccta 419 |||||||||||||||||||| |||| Sbjct: 3132313 gcggcaagttcggcggcgacgccta 3132337
>dbj|AB110643.1| Streptomyces thermoviolaceus stxIV, stxI genes for alpha-L-arabinofuranosidase, xylanase I complete cds Length = 3642 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 gccagggtgtggccgcgcacc 114 ||||||||||||||||||||| Sbjct: 2572 gccagggtgtggccgcgcacc 2552
>gb|AF194024.1|AF194024 Streptomyces thermocyaneoviolaceus xylanase A precursor (xynA) gene, complete cds Length = 1918 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 gccagggtgtggccgcgcacc 114 ||||||||||||||||||||| Sbjct: 848 gccagggtgtggccgcgcacc 828
>gb|AE003812.4| Drosophila melanogaster chromosome 2R, section 38 of 73 of the complete sequence Length = 255772 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 348 ggattgcctcaaggagctgcaggtg 372 ||||| ||||||||||||||||||| Sbjct: 251089 ggattacctcaaggagctgcaggtg 251113
>gb|M64551.1|STMXLNA Streptomyces lividans alpha-L-arabinofuranosidase precursor (abfB) and xylanase A precursor (xlnA) genes, complete cds Length = 4501 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 gccagggtgtggccgcgcacc 114 ||||||||||||||||||||| Sbjct: 2683 gccagggtgtggccgcgcacc 2663
>gb|AC004766.1|AC004766 Drosophila melanogaster DNA sequence (P1s DS08108 (D156) and DS09214 (D202)), complete sequence Length = 93932 Score = 42.1 bits (21), Expect = 1.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 348 ggattgcctcaaggagctgcaggtg 372 ||||| ||||||||||||||||||| Sbjct: 76381 ggattacctcaaggagctgcaggtg 76357
>gb|AF355455.2| Hordeum vulgare thaumatin-like protein TLP4 mRNA, complete cds Length = 800 Score = 40.1 bits (20), Expect = 6.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 247 gacttcttcgacctgtccgtcatcgacgggttcaac 282 ||||||| |||| | |||||||||||||||| |||| Sbjct: 400 gacttctacgacatctccgtcatcgacgggtacaac 435
>ref|XM_474578.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 831 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 tcgacgggttcaacgtgccg 288 |||||||||||||||||||| Sbjct: 473 tcgacgggttcaacgtgccg 492
>ref|XM_473406.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 363 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 ggcggtgtgcgtctcgacccaggc 54 ||||||||||| |||||||||||| Sbjct: 352 ggcggtgtgcgcctcgacccaggc 329
>gb|AY648978.1| Salmonella enterica subsp. enterica serovar Pullorum outer membrane protein F precursor-like gene, partial sequence Length = 1134 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 agttcggcggcgacacctac 420 |||||||||||||||||||| Sbjct: 389 agttcggcggcgacacctac 408
>ref|NM_005632.2| Homo sapiens small optic lobes homolog (Drosophila) (SOLH), mRNA Length = 4759 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 cagccgaccacgctggccga 218 |||||||||||||||||||| Sbjct: 3205 cagccgaccacgctggccga 3224
>gb|DQ167193.1| Triticum monococcum pathogenesis-related 5 mRNA, complete cds Length = 760 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 gtcatcgacgggttcaacgtgccg 288 ||||||||||| |||||||||||| Sbjct: 389 gtcatcgacggcttcaacgtgccg 412
>gb|BC044259.1| Homo sapiens small optic lobes homolog (Drosophila), mRNA (cDNA clone IMAGE:6150279), partial cds Length = 1967 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 cagccgaccacgctggccga 218 |||||||||||||||||||| Sbjct: 413 cagccgaccacgctggccga 432
>emb|AL607006.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0079A21, complete sequence Length = 141787 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 ggcggtgtgcgtctcgacccaggc 54 ||||||||||| |||||||||||| Sbjct: 125879 ggcggtgtgcgcctcgacccaggc 125856
>ref|XM_847198.1| PREDICTED: Canis familiaris similar to small optic lobes, transcript variant 2 (LOC490097), mRNA Length = 4382 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 cagccgaccacgctggccga 218 |||||||||||||||||||| Sbjct: 2794 cagccgaccacgctggccga 2813
>ref|XM_547218.2| PREDICTED: Canis familiaris similar to small optic lobes, transcript variant 1 (LOC490097), mRNA Length = 4427 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 cagccgaccacgctggccga 218 |||||||||||||||||||| Sbjct: 2839 cagccgaccacgctggccga 2858
>gb|AY358837.1| Homo sapiens clone DNA96877 CD99L2 (UNQ1964) mRNA, complete cds Length = 3597 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gcctcaaggagctgcaggtg 372 |||||||||||||||||||| Sbjct: 1332 gcctcaaggagctgcaggtg 1351
>emb|Z97986.3|HS366D1 Human DNA sequence from clone LA16c-366D1 on chromosome 16 Contains the SOLH (small optic lobes (Drosophila) homolog) gene, an EST, an STS, GSSs and CpG Islands, complete sequence Length = 36307 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 cagccgaccacgctggccga 218 |||||||||||||||||||| Sbjct: 21284 cagccgaccacgctggccga 21303
>gb|BC112918.1| Homo sapiens small optic lobes homolog (Drosophila), mRNA (cDNA clone IMAGE:7469837), complete cds Length = 3004 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 cagccgaccacgctggccga 218 |||||||||||||||||||| Sbjct: 1430 cagccgaccacgctggccga 1449
>gb|BC030536.1| Homo sapiens CD99 molecule-like 2, transcript variant 1, mRNA (cDNA clone MGC:40250 IMAGE:5242536), complete cds Length = 3572 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gcctcaaggagctgcaggtg 372 |||||||||||||||||||| Sbjct: 1319 gcctcaaggagctgcaggtg 1338
>gb|BC025729.1| Homo sapiens CD99 molecule-like 2, mRNA (cDNA clone MGC:34116 IMAGE:5203087), complete cds Length = 5016 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gcctcaaggagctgcaggtg 372 |||||||||||||||||||| Sbjct: 2680 gcctcaaggagctgcaggtg 2699
>emb|AL590708.18| Human DNA sequence from clone RP11-395P17 on chromosome 9 Contains the PCSCL gene for likely ortholog of rat peroxisomal Ca-dependent solute carrier-like protein (KIAA1896), the PTGES2 gene for prostaglandin E synthase 2 (GBF1, GBF-1, C9orf15, FLJ14038), the LCN2 gene for lipocalin 2 (oncogene 24p3) (NGAL), the C9orf16 gene for chromosome 9 open reading frame 16 (MGC4639, EST00098, FLJ12823), the CIZ1 gene for Cip1-interacting zinc finger protein (LSFR1), the DNM1 gene for dynamin 1 (DNM), the GOLGA2 gene for golgi autoantigen, golgin subfamily a, 2 (GM130, MGC20672), the gene for a novel protein and seven CpG islands, complete sequence Length = 194056 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 355 ctcaaggagctgcaggtgcc 374 |||||||||||||||||||| Sbjct: 47508 ctcaaggagctgcaggtgcc 47489
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 cggcaagttcggcggcgaca 415 |||||||||||||||||||| Sbjct: 1436079 cggcaagttcggcggcgaca 1436098
>gb|AY341077.1| Salmonella enterica subsp. enterica serovar Gallinarum outer membrane protein C (ompC) gene, complete cds Length = 1271 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 agttcggcggcgacacctac 420 |||||||||||||||||||| Sbjct: 434 agttcggcggcgacacctac 453
>emb|Y15844.1|SMOMPC Salmonella minnesota ompC gene Length = 2111 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 agttcggcggcgacacctac 420 |||||||||||||||||||| Sbjct: 1264 agttcggcggcgacacctac 1283
>emb|X97687.1|TATHAUMLP T.aestivum cDNA for a thaumatin-like protein Length = 810 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 gtcatcgacgggttcaacgtgccg 288 ||||||||||| |||||||||||| Sbjct: 399 gtcatcgacggcttcaacgtgccg 422
>emb|X65844.1|ZMPGG6 Z.mays PGg6 gene for polygalacturonase Length = 2213 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 caccaaggattgcctcaaggagct 365 |||||||| ||||||||||||||| Sbjct: 1705 caccaagggttgcctcaaggagct 1728
>emb|X64408.1|ZMPGTNSG Z.mays gene PG for polygalacturonase Length = 2950 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 caccaaggattgcctcaaggagct 365 |||||||| ||||||||||||||| Sbjct: 2397 caccaagggttgcctcaaggagct 2420
>gb|AY947889.1| Streptomyces hygroscopicus strain AM 3672 herbimycin polyketide biosynthetic gene cluster, complete sequence Length = 86941 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 tcccgggtggcggtgtgcgt 42 |||||||||||||||||||| Sbjct: 74239 tcccgggtggcggtgtgcgt 74258
>emb|X57627.1|ZMPGAL1 Z.mays mRNA for polygalacturonase (clone PG1) Length = 1592 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 caccaaggattgcctcaaggagct 365 |||||||| ||||||||||||||| Sbjct: 1204 caccaagggttgcctcaaggagct 1227
>gb|AE008801.1| Salmonella typhimurium LT2, section 105 of 220 of the complete genome Length = 21905 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 agttcggcggcgacacctac 420 |||||||||||||||||||| Sbjct: 11420 agttcggcggcgacacctac 11401
>emb|X07835.1|STOMP Salmonella typhi DNA for outer membrane protein Length = 1419 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 agttcggcggcgacacctac 420 |||||||||||||||||||| Sbjct: 446 agttcggcggcgacacctac 465
>emb|AL731613.5|OSJN00257 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0065H10, complete sequence Length = 133967 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 ggcggtgtgcgtctcgacccaggc 54 ||||||||||| |||||||||||| Sbjct: 42437 ggcggtgtgcgcctcgacccaggc 42414
>emb|AL662959.3|OSJN00160 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019G23, complete sequence Length = 150305 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 tcgacgggttcaacgtgccg 288 |||||||||||||||||||| Sbjct: 19661 tcgacgggttcaacgtgccg 19642
>emb|AL627274.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 10/20 Length = 256050 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 agttcggcggcgacacctac 420 |||||||||||||||||||| Sbjct: 22142 agttcggcggcgacacctac 22123
>emb|AJ000330.2|PSSTYCATA Pseudomonas sp. Y2 DNA for styrene catabolism genes Length = 29685 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 cctgggccagggcgcgaaca 244 |||||||||||||||||||| Sbjct: 4468 cctgggccagggcgcgaaca 4449
>gb|AE006464.1| Homo sapiens 16p13.3 sequence section 3 of 8 Length = 256073 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 cagccgaccacgctggccga 218 |||||||||||||||||||| Sbjct: 24945 cagccgaccacgctggccga 24964
>emb|X57628.1|ZMPGAL2 Z.mays mRNA for polygalacturonase (clone PG2) Length = 1562 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 caccaaggattgcctcaaggagct 365 |||||||| ||||||||||||||| Sbjct: 1193 caccaagggttgcctcaaggagct 1216
>ref|NM_031462.2| Homo sapiens CD99 molecule-like 2 (CD99L2), transcript variant 1, mRNA Length = 3635 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gcctcaaggagctgcaggtg 372 |||||||||||||||||||| Sbjct: 1349 gcctcaaggagctgcaggtg 1368
>ref|NM_134446.2| Homo sapiens CD99 molecule-like 2 (CD99L2), transcript variant 2, mRNA Length = 3488 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gcctcaaggagctgcaggtg 372 |||||||||||||||||||| Sbjct: 1202 gcctcaaggagctgcaggtg 1221
>ref|NM_134445.2| Homo sapiens CD99 molecule-like 2 (CD99L2), transcript variant 3, mRNA Length = 3419 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gcctcaaggagctgcaggtg 372 |||||||||||||||||||| Sbjct: 1133 gcctcaaggagctgcaggtg 1152
>emb|CR857703.1| Pongo pygmaeus mRNA; cDNA DKFZp459D191 (from clone DKFZp459D191) Length = 3503 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gcctcaaggagctgcaggtg 372 |||||||||||||||||||| Sbjct: 1245 gcctcaaggagctgcaggtg 1264
>emb|AL136580.1|HSM801554 Homo sapiens mRNA; cDNA DKFZp761H2024 (from clone DKFZp761H2024) Length = 3651 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gcctcaaggagctgcaggtg 372 |||||||||||||||||||| Sbjct: 1348 gcctcaaggagctgcaggtg 1367
>gb|AF389884.1| Triticum aestivum thaumatin-like protein 2 gene, complete cds Length = 465 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 265 gtcatcgacgggttcaacgtgccg 288 ||||||||||| |||||||||||| Sbjct: 301 gtcatcgacggcttcaacgtgccg 324
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 gggtgccgtgctgcgcggtg 329 |||||||||||||||||||| Sbjct: 3168071 gggtgccgtgctgcgcggtg 3168052
>gb|DQ421831.1| Zea mays clone 13.4 Zea m 13 allergen mRNA, partial cds Length = 1412 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 caccaaggattgcctcaaggagct 365 |||||||| ||||||||||||||| Sbjct: 1201 caccaagggttgcctcaaggagct 1224
>dbj|AK125020.1| Homo sapiens cDNA FLJ43030 fis, clone BRTHA3000633, moderately similar to Single-pass transmembrane protein Length = 3555 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gcctcaaggagctgcaggtg 372 |||||||||||||||||||| Sbjct: 1300 gcctcaaggagctgcaggtg 1319
>dbj|AK126859.1| Homo sapiens cDNA FLJ44911 fis, clone BRAMY3009158 Length = 4108 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gcctcaaggagctgcaggtg 372 |||||||||||||||||||| Sbjct: 1858 gcctcaaggagctgcaggtg 1877
>emb|CR611984.1| full-length cDNA clone CS0DG001YL05 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1386 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gcctcaaggagctgcaggtg 372 |||||||||||||||||||| Sbjct: 956 gcctcaaggagctgcaggtg 975
>gb|AE011803.1| Xanthomonas axonopodis pv. citri str. 306, section 181 of 469 of the complete genome Length = 11258 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 gggtgccgtgctgcgcggtg 329 |||||||||||||||||||| Sbjct: 9836 gggtgccgtgctgcgcggtg 9855
>dbj|AK024278.1| Homo sapiens cDNA FLJ14216 fis, clone NT2RP3003672, weakly similar to T-CELL SURFACE GLYCOPROTEIN E2 PRECURSOR Length = 3219 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gcctcaaggagctgcaggtg 372 |||||||||||||||||||| Sbjct: 966 gcctcaaggagctgcaggtg 985
>dbj|AK023776.1| Homo sapiens cDNA FLJ13714 fis, clone PLACE2000399, weakly similar to T-CELL SURFACE GLYCOPROTEIN E2 PRECURSOR Length = 2891 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 gcctcaaggagctgcaggtg 372 |||||||||||||||||||| Sbjct: 1145 gcctcaaggagctgcaggtg 1164
>gb|AE012271.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 179 of 460 of the complete genome Length = 10028 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 gggtgccgtgctgcgcggtg 329 |||||||||||||||||||| Sbjct: 2205 gggtgccgtgctgcgcggtg 2224
>gb|AY081185.1| Salmonella enterica subsp. enterica serovar Pullorum outer membrane protein (ompC) gene, partial cds Length = 1027 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 agttcggcggcgacacctac 420 |||||||||||||||||||| Sbjct: 384 agttcggcggcgacacctac 403
>gb|AY081184.1| Salmonella enterica subsp. enterica serovar Dublin outer membrane protein (ompC) gene, partial cds Length = 1027 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 agttcggcggcgacacctac 420 |||||||||||||||||||| Sbjct: 384 agttcggcggcgacacctac 403
>gb|AY081183.1| Salmonella enterica subsp. enterica serovar Gallinarum outer membrane protein (ompC) gene, partial cds Length = 1027 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 agttcggcggcgacacctac 420 |||||||||||||||||||| Sbjct: 384 agttcggcggcgacacctac 403
>gb|BC021854.1|BC021854 Homo sapiens, Similar to small optic lobes homolog (Drosophila), clone IMAGE:4996424, mRNA, partial cds Length = 2826 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 cagccgaccacgctggccga 218 |||||||||||||||||||| Sbjct: 1272 cagccgaccacgctggccga 1291
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 gggtgccgtgctgcgcggtg 329 |||||||||||||||||||| Sbjct: 3067136 gggtgccgtgctgcgcggtg 3067117
>gb|AF002223.2| Homo sapiens chromosome X multiple clones map q28, complete sequence Length = 209932 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 gcctcaaggagctgcaggtg 372 |||||||||||||||||||| Sbjct: 183170 gcctcaaggagctgcaggtg 183151
>ref|NM_213908.1| Sus scrofa CD18 leukocyte adhesion molecule (CD18), mRNA Length = 2929 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 gcagcggccgcggccggtgc 150 |||||||||||||||||||| Sbjct: 1905 gcagcggccgcggccggtgc 1924
>gb|AF274573.4| Homo sapiens chromosome X clone RP11-316K19, RP11-316M19, RP4-687A5 map q28, complete sequence Length = 189436 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 gcctcaaggagctgcaggtg 372 |||||||||||||||||||| Sbjct: 13001 gcctcaaggagctgcaggtg 12982
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 agttcggcggcgacacctac 420 |||||||||||||||||||| Sbjct: 679077 agttcggcggcgacacctac 679096
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 200 agccgaccacgctggccgag 219 |||||||||||||||||||| Sbjct: 4646536 agccgaccacgctggccgag 4646517 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 127 gacggcagcggccgcggccggtgc 150 ||||||| |||||||||||||||| Sbjct: 2524152 gacggcaccggccgcggccggtgc 2524129
>emb|X65845.1|ZMPGG14 Z.mays PGg14 gene for polygalacturonase Length = 2407 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 caccaaggattgcctcaaggagct 365 |||||||| ||||||||||||||| Sbjct: 1893 caccaagggttgcctcaaggagct 1916
>emb|X57743.1|ZMPGAL3 Z.mays mRNA for polygalacturonase (clone PG3) Length = 1555 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 caccaaggattgcctcaaggagct 365 |||||||| ||||||||||||||| Sbjct: 1187 caccaagggttgcctcaaggagct 1210
>emb|X57575.1|ZMPGAL4 Z.mays mRNA for polygalacturonase (clone PG4) Length = 714 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 caccaaggattgcctcaaggagct 365 |||||||| ||||||||||||||| Sbjct: 508 caccaagggttgcctcaaggagct 531
>emb|X57274.1|ZMPS3C12 Z.mays pollen specific mRNA C-terminal (clone 3C12) Length = 1245 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 342 caccaaggattgcctcaaggagct 365 |||||||| ||||||||||||||| Sbjct: 1056 caccaagggttgcctcaaggagct 1079
>dbj|AK107984.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-E09, full insert sequence Length = 956 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 tcgacgggttcaacgtgccg 288 |||||||||||||||||||| Sbjct: 541 tcgacgggttcaacgtgccg 560
>gb|AF039309.1|AF039309 Salmonella typhimurium outer membrane porin C (ompC) gene, complete cds Length = 1629 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 agttcggcggcgacacctac 420 |||||||||||||||||||| Sbjct: 815 agttcggcggcgacacctac 834
>emb|AL442113.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0806H05, complete sequence Length = 102515 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 tcgacgggttcaacgtgccg 288 |||||||||||||||||||| Sbjct: 57888 tcgacgggttcaacgtgccg 57869
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 agttcggcggcgacacctac 420 |||||||||||||||||||| Sbjct: 681571 agttcggcggcgacacctac 681590
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 401 agttcggcggcgacacctac 420 |||||||||||||||||||| Sbjct: 2380475 agttcggcggcgacacctac 2380456
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 310 gggtgccgtgctgcgcggtg 329 |||||||||||||||||||| Sbjct: 3175398 gggtgccgtgctgcgcggtg 3175379
>gb|AF010150.1|AF010150 Pseudomonas aeruginosa PopN (popN), Pcr1 (pcr1), Pcr2 (pcr2), Pcr3 (pcr3), Pcr4 (pcr4), PcrD (pcrD) and PcrR (pcrR) genes, complete cds Length = 4889 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ggagctgcaggtgccgggag 379 |||||||||||||||||||| Sbjct: 3687 ggagctgcaggtgccgggag 3706
>gb|U85647.1|HSU85647 Homo sapiens small optic lobes homolog (SOLH) mRNA, complete cds Length = 4163 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 199 cagccgaccacgctggccga 218 |||||||||||||||||||| Sbjct: 3205 cagccgaccacgctggccga 3224
>gb|U13941.1|SSU13941 Sus scrofa CD18 mRNA, complete cds Length = 2929 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 gcagcggccgcggccggtgc 150 |||||||||||||||||||| Sbjct: 1905 gcagcggccgcggccggtgc 1924
>gb|L39776.1|ASTRASTL3A Avena sativa thaumatin-like pathogenesis-related protein (rastl-3) mRNA, complete cds Length = 688 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 198 gcagccgaccacgctggccgagtacacc 225 ||||||| | |||||||||||||||||| Sbjct: 329 gcagccggcgacgctggccgagtacacc 356
>gb|L39775.1|ASTRASTL2A Avana sativa thaumatin-like pathogenesis-related protein (rastl-2) mRNA, complete cds Length = 754 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 198 gcagccgaccacgctggccgagtacacc 225 ||||||| | |||||||||||||||||| Sbjct: 344 gcagccggcgacgctggccgagtacacc 371
>gb|L39774.1|ASTRASTL1A Avena sativa thaumatin-like pathogenesis-related protein (rastl-1) mRNA, complete cds Length = 734 Score = 40.1 bits (20), Expect = 6.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 198 gcagccgaccacgctggccgagtacacc 225 ||||||| | |||||||||||||||||| Sbjct: 336 gcagccggcgacgctggccgagtacacc 363
>gb|M31424.1|STYOMPC S.typhi outer membrane protein (ompC) gene, complete cds Length = 1639 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 401 agttcggcggcgacacctac 420 |||||||||||||||||||| Sbjct: 792 agttcggcggcgacacctac 811 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,693,733 Number of Sequences: 3902068 Number of extensions: 2693733 Number of successful extensions: 56884 Number of sequences better than 10.0: 162 Number of HSP's better than 10.0 without gapping: 167 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 54813 Number of HSP's gapped (non-prelim): 2055 length of query: 446 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 424 effective length of database: 17,147,199,772 effective search space: 7270412703328 effective search space used: 7270412703328 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
