ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | bast74b02 |
|---|---|
| Clone Library Name | barley_pub |
>ZN645_MACFA (Q4R361) Zinc finger protein 645| Length = 422 Score = 62.4 bits (150), Expect = 6e-10 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 6/98 (6%) Frame = +1 Query: 64 IGRRSRRPLGERVHICSRCEFPIAIYGRLIPCEHAFCLACAR-----SDSSCYLCDERIQ 228 IG + P +H C +C+ PI IYGR+IPC+HAFC CA C C + Sbjct: 43 IGEKDDSP----IHFCDKCDLPIKIYGRIIPCKHAFCYNCANLYDKIGYKICPRCSYPVL 98 Query: 229 KIQTVKMMEGIFICAAPM-CLKSFLKKAEFMSHVPEAH 339 +I+ K +F+C+ C +++L + +H+ H Sbjct: 99 RIEEHK-RGSVFMCSVVQGCKRTYLSQKSLQAHIKRRH 135
>ZN645_HUMAN (Q8N7E2) Zinc finger protein 645| Length = 425 Score = 62.0 bits (149), Expect = 8e-10 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 6/86 (6%) Frame = +1 Query: 100 VHICSRCEFPIAIYGRLIPCEHAFCLACAR-----SDSSCYLCDERIQKIQTVKMMEGIF 264 +H C +C+ PI IYGR+IPC+HAFC CA C C + +I+ K +F Sbjct: 54 IHFCDKCDLPIKIYGRIIPCKHAFCYHCANLYDKVGYKVCPRCRYPVLRIEAHK-RGSVF 112 Query: 265 ICA-APMCLKSFLKKAEFMSHVPEAH 339 +C+ C +++L + +H+ H Sbjct: 113 MCSIVQQCKRTYLSQKSLQAHIKRRH 138
>RAD18_KLULA (Q6CTZ8) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 427 Score = 39.3 bits (90), Expect = 0.005 Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 9/115 (7%) Frame = +1 Query: 97 RVHICSRCEFPIAIYGRLIPCEHAFCLACAR----SDSSCYLCDERIQKIQTVKMMEGIF 264 R HIC +F A L PC H+FC C R +S C LC + + K Sbjct: 31 RCHICK--DFLKASV--LTPCGHSFCSICIRKYLQKESKCPLCLSDLTESMLQKEFLVQE 86 Query: 265 ICAAPMCLKSFLKKAEFMSHVPEAHANLLQSNTEKE-----ERNEPDAPNISRAS 414 IC++ + L+ L+K +S E N + + E + +R PD+P++S S Sbjct: 87 ICSSYVKLRGSLQKHLTISSQEEEKDNEIIISDEADTSVGTKRGTPDSPSLSSVS 141
>TRI42_MOUSE (Q9D2H5) Tripartite motif protein 42| Length = 723 Score = 35.4 bits (80), Expect = 0.077 Identities = 20/75 (26%), Positives = 32/75 (42%) Frame = +1 Query: 109 CSRCEFPIAIYGRLIPCEHAFCLACARSDSSCYLCDERIQKIQTVKMMEGIFICAAPMCL 288 C C + ++ ++PC H+ C C R ++QK ++ E FI PMC Sbjct: 146 CPMCN-RLRLHSFMLPCNHSLCEKCLR----------QLQK--HAEVTENFFILICPMCS 192 Query: 289 KSFLKKAEFMSHVPE 333 +S H+PE Sbjct: 193 RSHCMPYSHQMHLPE 207
>ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 35.4 bits (80), Expect = 0.077 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 4/46 (8%) Frame = +1 Query: 109 CSRCEFPIAIYGRLIPCEHAFCLACAR----SDSSCYLCDERIQKI 234 C C I R +PC HAFCLAC R +C LC +Q + Sbjct: 13 CCICLDAITGAARALPCLHAFCLACIRRWLEGRPTCPLCKAPVQSL 58
>ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P135 protein)| (IER 2.9/ER2.6) Length = 676 Score = 35.4 bits (80), Expect = 0.077 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 4/46 (8%) Frame = +1 Query: 109 CSRCEFPIAIYGRLIPCEHAFCLACAR----SDSSCYLCDERIQKI 234 C C I R +PC HAFCLAC R +C LC +Q + Sbjct: 13 CCICLDAITGAARALPCLHAFCLACIRRWLEGRPTCPLCKAPVQSL 58
>GLI2_HUMAN (P10070) Zinc finger protein GLI2 (Tax helper protein)| Length = 1258 Score = 34.7 bits (78), Expect = 0.13 Identities = 39/157 (24%), Positives = 54/157 (34%), Gaps = 32/157 (20%) Frame = +1 Query: 79 RRPLGERVHICSRCEFPIAIYGRL---------------IPCEHAFCLACARSDSSCYLC 213 RR GE+ H C+ E Y RL CEH C + S Sbjct: 167 RRHTGEKPHKCT-FEGCSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNAS----- 220 Query: 214 DERIQKIQTVKMMEGIFICAAPMCLKSFLKKAEFMSHV-----PEAHAN----------- 345 +R + E +IC P C K + + HV P+AH Sbjct: 221 -DRAKHQNRTHSNEKPYICKIPGCTKRYTDPSSLRKHVKTVHGPDAHVTKKQRNDVHLRT 279 Query: 346 -LLQSNTEKEERNEPDAPNISRASGGDTQRQSQCLNI 453 LL+ N + E EP P + AS +Q CL++ Sbjct: 280 PLLKENGDSEAGTEPGGPESTEAS-STSQAVEDCLHV 315
>IE61_VZVD (P09309) Transcriptional repressor IE61 (Immediate-early protein| 61) (IE61) Length = 467 Score = 33.9 bits (76), Expect = 0.22 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%) Frame = +1 Query: 109 CSRCEFPIAIYGRLIPCEHAFCLACARSDSS----CYLCDERIQKI 234 C+ C ++ G+ +PC H FC C R+ +S C LC +Q I Sbjct: 19 CTICMSTVSDLGKTMPCLHDFCFVCIRAWTSTSVQCPLCRCPVQSI 64
>ESAG8_TRYBB (P23799) Putative adenylate cyclase regulatory protein (Leucine| repeat protein) (VSG expression site-associated protein F14.9) Length = 630 Score = 33.1 bits (74), Expect = 0.38 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%) Frame = +1 Query: 106 ICSRCEFPIAIYG-RLIPCEHAFCLACARSDSSCYLCDERI 225 +C+ C P A L+PC H FC AC C C RI Sbjct: 9 MCAVCREPWAEGAVELLPCRHVFCTACVVQRWRCPSCQRRI 49
>ICP0_PRVIF (P29129) Trans-acting transcriptional protein ICP0 (Early protein| 0) (EP0) Length = 410 Score = 32.7 bits (73), Expect = 0.50 Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 4/46 (8%) Frame = +1 Query: 109 CSRCEFPIAIYGRLIPCEHAFCLACAR----SDSSCYLCDERIQKI 234 C C A + +PC H FCL C + + ++C LC+ R+ I Sbjct: 46 CPICLDVAATEAQTLPCMHKFCLDCIQRWTLTSTACPLCNARVTSI 91
>PCGF4_HUMAN (P35226) Polycomb group RING finger protein 4 (Polycomb complex| protein BMI-1) (RING finger protein 51) Length = 326 Score = 32.3 bits (72), Expect = 0.65 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 11/90 (12%) Frame = +1 Query: 148 LIPCEHAFCLAC----ARSDSSCYLCDERIQK------IQTVKMMEGIFICAAPMCLKSF 297 +I C H+FC C + C +CD ++ K I++ K ++ I P K+ Sbjct: 31 IIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNE 90 Query: 298 LK-KAEFMSHVPEAHANLLQSNTEKEERNE 384 +K + +F + P A A +N E+R E Sbjct: 91 MKRRRDFYAAHPSADA----ANGSNEDRGE 116
>PCGF4_FELCA (Q9TST0) Polycomb group RING finger protein 4 (Polycomb complex| protein BMI-1) Length = 326 Score = 32.3 bits (72), Expect = 0.65 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 11/90 (12%) Frame = +1 Query: 148 LIPCEHAFCLAC----ARSDSSCYLCDERIQK------IQTVKMMEGIFICAAPMCLKSF 297 +I C H+FC C + C +CD ++ K I++ K ++ I P K+ Sbjct: 31 IIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNE 90 Query: 298 LK-KAEFMSHVPEAHANLLQSNTEKEERNE 384 +K + +F + P A A +N E+R E Sbjct: 91 MKRRRDFYAAHPSADA----ANGSNEDRGE 116
>PCGF4_MOUSE (P25916) Polycomb group RING finger protein 4 (Polycomb complex| protein BMI-1) Length = 324 Score = 32.3 bits (72), Expect = 0.65 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 11/90 (12%) Frame = +1 Query: 148 LIPCEHAFCLAC----ARSDSSCYLCDERIQK------IQTVKMMEGIFICAAPMCLKSF 297 +I C H+FC C + C +CD ++ K I++ K ++ I P K+ Sbjct: 31 IIECLHSFCKTCIVRYLETSKYCPICDVQVHKTRPLLNIRSDKTLQDIVYKLVPGLFKNE 90 Query: 298 LK-KAEFMSHVPEAHANLLQSNTEKEERNE 384 +K + +F + P A A +N E+R E Sbjct: 91 MKRRRDFYAAHPSADA----ANGSNEDRGE 116
>ZN406_MOUSE (Q7TS63) Zinc finger protein 406| Length = 1219 Score = 32.0 bits (71), Expect = 0.85 Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 4/103 (3%) Frame = +1 Query: 43 AIAATRAIGRRSRRPLGERVHICSRCEFPIAIYGRLIPCEHAFCLACARSDSSCYLCDER 222 A+ R + R +R L HIC R + + + + + +C LC Sbjct: 380 ALDELRLMTREGKRQLLYDCHICERK------FKNELDRDRHMLVHGDKWPFACELCGHG 433 Query: 223 IQKIQT----VKMMEGIFICAAPMCLKSFLKKAEFMSHVPEAH 339 K Q V+ +++CA +CLK F+ SH+ E H Sbjct: 434 ATKYQALELHVRKHPFVYVCA--LCLKKFVSSIRLRSHIREVH 474
>FUR2_DROME (P30432) Furin-like protease 2 precursor (EC 3.4.21.75) (Furin-2)| Length = 1679 Score = 32.0 bits (71), Expect = 0.85 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 4/63 (6%) Frame = +1 Query: 109 CSRCEFPIAIYGRLIPCEHAFCLAC-ARSDSSCYLC--DERIQKIQTVK-MMEGIFICAA 276 CS EF + G+ PC HA C +C +D+SC C + +++ + V EG F+ A Sbjct: 1198 CSESEFYSQVEGQCRPC-HASCGSCNGPADTSCTSCPPNRLLEQSRCVSGCREGFFVEAG 1256 Query: 277 PMC 285 +C Sbjct: 1257 SLC 1259
>SUHW_DROME (P08970) Protein suppressor of hairy wing| Length = 941 Score = 31.2 bits (69), Expect = 1.4 Identities = 27/104 (25%), Positives = 39/104 (37%), Gaps = 3/104 (2%) Frame = +1 Query: 31 VTNSAIAATRAIGRRSRRPLGERVHICSRC--EFPIAIYGRLIPCEHAFCLACARSDSSC 204 V N A A + R +R GER H C C F A R H C + D Sbjct: 473 VCNQAFAVKEVLNRHMKRHTGERPHKCDECGKSFIQATQLRTHSKTHIRPFPCEQCDEKF 532 Query: 205 YLCDERIQKIQT-VKMMEGIFICAAPMCLKSFLKKAEFMSHVPE 333 + + ++T + +F CA C ++F A H+ E Sbjct: 533 KTEKQLERHVKTHSRTKRPVFSCAE--CKRNFRTPALLKEHMDE 574
>ICP0_EHV1V (P84445) Trans-acting transcriptional protein ICP0 (Infected cell| protein 0) Length = 532 Score = 31.2 bits (69), Expect = 1.4 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 4/46 (8%) Frame = +1 Query: 109 CSRCEFPIAIYGRLIPCEHAFCLAC----ARSDSSCYLCDERIQKI 234 C C + Y +PC HAFC C R + +C LC ++ + Sbjct: 8 CPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVESV 53
>ICP0_EHV1B (P28990) Trans-acting transcriptional protein ICP0| Length = 532 Score = 31.2 bits (69), Expect = 1.4 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 4/46 (8%) Frame = +1 Query: 109 CSRCEFPIAIYGRLIPCEHAFCLAC----ARSDSSCYLCDERIQKI 234 C C + Y +PC HAFC C R + +C LC ++ + Sbjct: 8 CPICLEDPSNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVESV 53
>PEX2_ARATH (Q9CA86) Peroxisome assembly protein 2 (Peroxin-2) (AthPEX2)| (Pex2p) Length = 333 Score = 31.2 bits (69), Expect = 1.4 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 6/56 (10%) Frame = +1 Query: 109 CSRCEFPIAIYGRLIPCEHAFCLACARSDSS------CYLCDERIQKIQTVKMMEG 258 C C+ AI +PC+H +C C R+ + C C+E + IQ + G Sbjct: 277 CPICQVDPAIPFIALPCQHRYCYYCIRTRCASAASFRCLRCNEPVVAIQREGVSSG 332
>CAF1A_MOUSE (Q9QWF0) Chromatin assembly factor 1 subunit A (CAF-1 subunit A)| (Chromatin assembly factor I p150 subunit) (CAF-I 150 kDa subunit) (CAF-Ip150) Length = 911 Score = 31.2 bits (69), Expect = 1.4 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = +1 Query: 271 AAPMCLKSFLKKAEFMSHVPEAHANLLQSNTEKEERNEPD 390 AA MC+ F+KK + V + Q++TE++E ++ D Sbjct: 847 AATMCITQFMKKRRYDGQVGSGDMDGFQADTEEDEEDDTD 886
>IAP2_NPVAC (P41454) Probable apoptosis inhibitor 2 (IAP-2)| Length = 249 Score = 30.8 bits (68), Expect = 1.9 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Frame = +1 Query: 85 PLGERVHICSRCEFPIAIYGRLIPCEH-AFCLACARSDSSCYLCDERI-QKIQTV 243 PL ++V C C F +PC H A C C+R C +C+ +I Q+I+T+ Sbjct: 194 PLTQQVSECKVC-FDREKSVCFMPCRHLAVCTECSRRCKRCCVCNAKIMQRIETL 247
>BARD1_MOUSE (O70445) BRCA1-associated RING domain protein 1 (BARD-1)| Length = 765 Score = 30.8 bits (68), Expect = 1.9 Identities = 37/150 (24%), Positives = 60/150 (40%), Gaps = 9/150 (6%) Frame = +1 Query: 52 ATRAIGRRSRRPLG--ERVHICSRC----EFPIAIYGRLIPCEHAFCLACARSDSSCYLC 213 AT + SR L E++ CSRC + P+ + G CEH FC C S C Sbjct: 23 ATDGLWAHSRAALARLEKLLRCSRCANILKEPVCLGG----CEHIFCSGCI---SDC--- 72 Query: 214 DERIQKIQTVKMMEGIFICAAPMCLKSFL--KKAEFMSHVPEAHANLLQSNTEKEERNEP 387 + G +C P + ++ + M + NLL N + ++ Sbjct: 73 -----------VGSGCPVCYTPAWILDLKINRQLDSMIQLSSKLQNLLHDNKDSKD---- 117 Query: 388 DAPNISRAS-GGDTQRQSQCLNIYCTCSSR 474 N SRAS GD +R+ + ++ + S+ Sbjct: 118 ---NTSRASLFGDAERKKNSIKMWFSPRSK 144
>ESA8C_TRYEQ (P26337) Putative adenylate cyclase regulatory protein| Length = 630 Score = 30.8 bits (68), Expect = 1.9 Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%) Frame = +1 Query: 106 ICSRCEFPIAIYG-RLIPCEHAFCLACARSDSSCYLCDERI 225 +C+ C P A L PC H FC C C C RI Sbjct: 9 MCAVCREPWAEGALELFPCRHVFCTVCVVERWRCPSCQRRI 49
>ZN451_MOUSE (Q8C0P7) Zinc finger protein 451| Length = 1056 Score = 30.8 bits (68), Expect = 1.9 Identities = 29/127 (22%), Positives = 48/127 (37%), Gaps = 16/127 (12%) Frame = +1 Query: 145 RLIPCEHAFCLACARSDSSCYLC--------DERIQKIQTVKMMEGI----FICAAPMCL 288 R P E A +++ CY C D + ++ + G F+ C Sbjct: 474 RQFPSEEAVEKHVFSANTMCYKCVVCGKVCEDSGVMRLHMSRFHGGAHLNNFLFWCRTCK 533 Query: 289 KSFLKKAEFMSHVPEAHA--NLLQSNTEKEERNEPDAPNISRASGGDTQRQSQCLNI--Y 456 K +KK M+H+ E H+ E EE E P+ S S +T + + + + Sbjct: 534 KELVKKDAIMAHITEFHSGHRYFYEMDEVEEEEEEAMPSSSVESHLNTDKPPSPIAVVDH 593 Query: 457 CTCSSRP 477 C +S P Sbjct: 594 CPANSPP 600
>ZN592_MOUSE (Q8BHZ4) Zinc finger protein 592 (Zfp-592)| Length = 1262 Score = 30.8 bits (68), Expect = 1.9 Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 15/69 (21%) Frame = +1 Query: 244 KMMEGIFICAAPMCLKSFLKKAEFMSHVPEAHA--------NLLQSNTEKEERN------ 381 K G+F C P C FL+K E M HV H + LQS+T+ Sbjct: 886 KTQAGVFKC--PECPLLFLQKPELMQHVKNTHGVPRNVEELSSLQSSTDTSSNRPGSRAP 943 Query: 382 -EPDAPNIS 405 EP A N++ Sbjct: 944 AEPPATNVA 952
>K1C18_MOUSE (P05784) Keratin, type I cytoskeletal 18 (Cytokeratin-18) (CK-18)| (Keratin-18) (K18) (Cytokeratin endo B) (Keratin D) Length = 422 Score = 30.4 bits (67), Expect = 2.5 Identities = 23/73 (31%), Positives = 36/73 (49%) Frame = +1 Query: 40 SAIAATRAIGRRSRRPLGERVHICSRCEFPIAIYGRLIPCEHAFCLACARSDSSCYLCDE 219 S +A TRA G+R + ++I + E IA Y RL+ F L A S+ + Sbjct: 339 SELAQTRAEGQRQAQEYEALLNIKVKLEAEIATYRRLLEDGEDFSLNDALDSSNSM---Q 395 Query: 220 RIQKIQTVKMMEG 258 +QK T K+++G Sbjct: 396 TVQKTTTRKIVDG 408
>GLI3_MOUSE (Q61602) Zinc finger protein GLI3| Length = 1596 Score = 30.4 bits (67), Expect = 2.5 Identities = 35/140 (25%), Positives = 49/140 (35%), Gaps = 20/140 (14%) Frame = +1 Query: 79 RRPLGERVHICSRCEFPIAIYGRL---------------IPCEHAFCLACARSDSSCYLC 213 RR GE+ H C+ E Y RL CEH C + S Sbjct: 538 RRHTGEKPHKCT-FEGCTKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNAS----- 591 Query: 214 DERIQKIQTVKMMEGIFICAAPMCLKSFLKKAEFMSHV-----PEAHANLLQSNTEKEER 378 +R + E ++C P C K + + HV PEAH T+K+ Sbjct: 592 -DRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHV------TKKQRG 644 Query: 379 NEPDAPNISRASGGDTQRQS 438 + P R SG +Q +S Sbjct: 645 DMHPRPPPPRDSGSHSQSRS 664
>GLI3_XENLA (Q91660) Zinc finger protein GLI3 (Neural-specific DNA-binding| protein xGLI3) (xGLI-3) Length = 1569 Score = 30.0 bits (66), Expect = 3.2 Identities = 35/140 (25%), Positives = 48/140 (34%), Gaps = 23/140 (16%) Frame = +1 Query: 79 RRPLGERVHICSRCEFPIAIYGRL---------------IPCEHAFCLACARSDSSCYLC 213 RR GE+ H C+ E Y RL CEH C + S Sbjct: 543 RRHTGEKPHKCT-FEGCSKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNAS----- 596 Query: 214 DERIQKIQTVKMMEGIFICAAPMCLKSFLKKAEFMSHV-----PEAHANLLQS---NTEK 369 +R + E ++C P C K + + HV PEAH Q + Sbjct: 597 -DRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRGDIHPRP 655 Query: 370 EERNEPDAPNISRASGGDTQ 429 EP + + SR+ G TQ Sbjct: 656 PPPREPGSHSQSRSPGQQTQ 675
>SUHW_DROVI (Q08876) Protein suppressor of hairy wing| Length = 899 Score = 30.0 bits (66), Expect = 3.2 Identities = 33/126 (26%), Positives = 46/126 (36%), Gaps = 13/126 (10%) Frame = +1 Query: 31 VTNSAIAATRAIGRRSRRPLGERVHICSRC--EFPIAIYGRLIPCEHAFCLACARSDSSC 204 V + + A + R +R GER H C+ C F A R H AC+ Sbjct: 472 VCSQSFAVKEVLNRHMKRHTGERPHKCNECGKSFIQATQLRTHSKTHLRPYACS------ 525 Query: 205 YLCDERIQKIQTVKMME-----------GIFICAAPMCLKSFLKKAEFMSHVPEAHANLL 351 LC IQK +T K +E F C C +SF A H+ + + Sbjct: 526 -LC---IQKFKTEKQLERHVKDHTRQKRASFACTE--CTRSFRTSALLKEHLDAGDHSPV 579 Query: 352 QSNTEK 369 +S K Sbjct: 580 KSTRAK 585
>GLI3_PANTR (Q5IS56) Zinc finger protein GLI3| Length = 1580 Score = 30.0 bits (66), Expect = 3.2 Identities = 35/140 (25%), Positives = 49/140 (35%), Gaps = 20/140 (14%) Frame = +1 Query: 79 RRPLGERVHICSRCEFPIAIYGRL---------------IPCEHAFCLACARSDSSCYLC 213 RR GE+ H C+ E Y RL CEH C + S Sbjct: 538 RRHTGEKPHKCT-FEGCTKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNAS----- 591 Query: 214 DERIQKIQTVKMMEGIFICAAPMCLKSFLKKAEFMSHV-----PEAHANLLQSNTEKEER 378 +R + E ++C P C K + + HV PEAH T+K+ Sbjct: 592 -DRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHV------TKKQRG 644 Query: 379 NEPDAPNISRASGGDTQRQS 438 + P R SG +Q +S Sbjct: 645 DIHPRPPPPRDSGSHSQSRS 664
>GLI3_HUMAN (P10071) Zinc finger protein GLI3| Length = 1580 Score = 30.0 bits (66), Expect = 3.2 Identities = 35/140 (25%), Positives = 49/140 (35%), Gaps = 20/140 (14%) Frame = +1 Query: 79 RRPLGERVHICSRCEFPIAIYGRL---------------IPCEHAFCLACARSDSSCYLC 213 RR GE+ H C+ E Y RL CEH C + S Sbjct: 538 RRHTGEKPHKCT-FEGCTKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNAS----- 591 Query: 214 DERIQKIQTVKMMEGIFICAAPMCLKSFLKKAEFMSHV-----PEAHANLLQSNTEKEER 378 +R + E ++C P C K + + HV PEAH T+K+ Sbjct: 592 -DRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHV------TKKQRG 644 Query: 379 NEPDAPNISRASGGDTQRQS 438 + P R SG +Q +S Sbjct: 645 DIHPRPPPPRDSGSHSQSRS 664
>MKRN4_HUMAN (Q13434) Makorin-4 (Zinc finger protein 127-Xp) (ZNF127-Xp) (RING| finger protein 64) Length = 485 Score = 29.6 bits (65), Expect = 4.2 Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 2/78 (2%) Frame = +1 Query: 139 YGRLIPCEHAFCLACARSDSSCYLCDERIQKIQTVKMMEGIFICAAPMC--LKSFLKKAE 312 +G L C H FCL C I+K ++ K E + + P C +F+ +E Sbjct: 334 FGILSNCNHTFCLKC-------------IRKWRSAKEFESRIVKSCPQCRITSNFVIPSE 380 Query: 313 FMSHVPEAHANLLQSNTE 366 + E L+Q E Sbjct: 381 YWVEEKEEKQKLIQKYKE 398
>TRI42_HUMAN (Q8IWZ5) Tripartite motif protein 42| Length = 723 Score = 29.6 bits (65), Expect = 4.2 Identities = 19/76 (25%), Positives = 33/76 (43%) Frame = +1 Query: 106 ICSRCEFPIAIYGRLIPCEHAFCLACARSDSSCYLCDERIQKIQTVKMMEGIFICAAPMC 285 +CSR + ++ ++PC H+ C C R ++QK ++ E FI P+C Sbjct: 148 MCSR----LRLHSFMLPCNHSLCEKCLR----------QLQK--HAEVTENFFILICPVC 191 Query: 286 LKSFLKKAEFMSHVPE 333 +S +PE Sbjct: 192 DRSHCMPYSNKMQLPE 207
>GLI4_XENLA (Q91661) Zinc finger protein GLI4 (Neural-specific DNA-binding| protein xGLI4) (xGLI-4) Length = 1361 Score = 29.6 bits (65), Expect = 4.2 Identities = 29/126 (23%), Positives = 49/126 (38%), Gaps = 13/126 (10%) Frame = +1 Query: 79 RRPLGERVHICSRCEFPIAIYGRLIPCEHAFCLACARSDSSCYLCD------------ER 222 RR GE+ H C+ E Y RL E+ + + Y+CD +R Sbjct: 347 RRHTGEKPHKCT-FEGCFKAYSRL---ENLKTHLRSHTGEKPYVCDHEGCNKAFSNASDR 402 Query: 223 IQKIQTVKMMEGIFICAAPMCLKSFLKKAEFMSHVPEAHANLLQSNTEKEERNE-PDAPN 399 + E +IC P C K + + HV H +++ K+ RN+ P+ Sbjct: 403 AKHQNRTHSNEKPYICKVPGCTKRYTDPSSLRKHVKTVHGP--EAHVTKKHRNDIIQKPS 460 Query: 400 ISRASG 417 + + +G Sbjct: 461 LPKENG 466
>MYLIP_MOUSE (Q8BM54) Ubiquitin ligase MYLIP (EC 6.3.2.-) (Myosin regulatory| light chain-interacting protein) (MIR) Length = 445 Score = 29.6 bits (65), Expect = 4.2 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%) Frame = +1 Query: 55 TRAIGRRSRRPLGERVHICSRCEFPIAIYGRLIPCEHAFCL-ACARSDSSCYLCDERIQK 231 TR + + R+ L E + + CE I PC H C +CA SC +C R++ Sbjct: 371 TRVLQEKLRK-LKEAMLCMACCEEEIN--STFCPCGHTVCCESCAAQLQSCPVCRSRVEH 427 Query: 232 IQTV 243 +Q V Sbjct: 428 VQHV 431
>PSC_DROME (P35820) Polycomb group protein Psc (Protein posterior sex combs)| Length = 1601 Score = 29.6 bits (65), Expect = 4.2 Identities = 33/124 (26%), Positives = 51/124 (41%), Gaps = 12/124 (9%) Frame = +1 Query: 7 AVAKSLGAVTNSAIAATRAIGRRSRRPLGERVH---ICSRCEFPIAIYGRLIPCEHAFCL 177 AVA S A T S +A T R R L V+ IC C+ + ++ C H+FC Sbjct: 230 AVAASSTATTTSDLATTS----RPRPVLLTAVNPHIICHLCQGYLINATTIVECLHSFCH 285 Query: 178 AC----ARSDSSCYLCDERIQ----KIQTVKMMEGIFICAAP-MCLKSFLKKAEFMSHVP 330 +C R + C C+ I I++ ++ I P + + ++K F P Sbjct: 286 SCLINHLRKERFCPRCEMVINNAKPNIKSDTTLQAIVYKLVPGLYERELMRKRAFYKDRP 345 Query: 331 EAHA 342 E A Sbjct: 346 EEAA 349
>ZO71_XENLA (P18751) Oocyte zinc finger protein XLCOF7.1 (Fragment)| Length = 898 Score = 29.6 bits (65), Expect = 4.2 Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 7/94 (7%) Frame = +1 Query: 79 RRPLGERVHICSRCEFPIA------IYGRLIPCEHAF-CLACARSDSSCYLCDERIQKIQ 237 R GE+ CS+C+ A I+ R E AF C C + C+ ++ + Q Sbjct: 671 RTHTGEKPFSCSKCDKCFASSSELNIHQRTHTGEKAFSCSECGK----CFTNRSQLSRHQ 726 Query: 238 TVKMMEGIFICAAPMCLKSFLKKAEFMSHVPEAH 339 + E C P C + F+ ++ +H +AH Sbjct: 727 MIHTGEKPISC--PECEECFVSSSQLTAHQQQAH 758
>R113B_HUMAN (Q8IZP6) RING finger protein 113B (Zinc finger protein 183-like 1)| Length = 322 Score = 29.6 bits (65), Expect = 4.2 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 15/49 (30%) Frame = +1 Query: 157 CEHAFCLACA----RSDSSCYLCD-----------ERIQKIQTVKMMEG 258 C H FC +CA R+ CY+CD E + K+Q ++ EG Sbjct: 271 CRHYFCESCALEHFRATPRCYICDQPTGGIFNPAKELMAKLQKLQAAEG 319
>MKRN3_MOUSE (Q60764) Makorin-3 (Zinc finger protein 127)| Length = 544 Score = 29.6 bits (65), Expect = 4.2 Identities = 22/78 (28%), Positives = 29/78 (37%), Gaps = 2/78 (2%) Frame = +1 Query: 139 YGRLIPCEHAFCLACARSDSSCYLCDERIQKIQTVKMMEGIFICAAPMCLKS--FLKKAE 312 +G L C H +CL C R S + RI K + P C S F+ +E Sbjct: 365 FGILFSCNHTYCLRCIRRWRSATQFENRISK-------------SCPQCRVSSGFVIPSE 411 Query: 313 FMSHVPEAHANLLQSNTE 366 F E L+Q E Sbjct: 412 FWVEEEEEKEKLVQQYKE 429
>K1C18_HUMAN (P05783) Keratin, type I cytoskeletal 18 (Cytokeratin-18) (CK-18)| (Keratin-18) (K18) Length = 429 Score = 29.6 bits (65), Expect = 4.2 Identities = 23/73 (31%), Positives = 36/73 (49%) Frame = +1 Query: 40 SAIAATRAIGRRSRRPLGERVHICSRCEFPIAIYGRLIPCEHAFCLACARSDSSCYLCDE 219 S +A TRA G+R + ++I + E IA Y RL+ F L A S+ + Sbjct: 346 SELAQTRAEGQRQAQEYEALLNIKVKLEAEIATYRRLLEDGEDFNLGDALDSSNSM---Q 402 Query: 220 RIQKIQTVKMMEG 258 IQK T ++++G Sbjct: 403 TIQKTTTRRIVDG 415
>ZN432_HUMAN (O94892) Zinc finger protein 432| Length = 652 Score = 29.3 bits (64), Expect = 5.5 Identities = 25/106 (23%), Positives = 40/106 (37%), Gaps = 7/106 (6%) Frame = +1 Query: 28 AVTNSAIAATRAIGRRSRRPLGERVHICSRCEFPIAIYGRLIPCEHAF-------CLACA 186 +V+ A + + + R E+ H+CS C +L E C CA Sbjct: 180 SVSTKANSTKSQVSKHQRTHEIEKNHVCSECGKAFVKKSQLTDHERVHTGEKPYGCTLCA 239 Query: 187 RSDSSCYLCDERIQKIQTVKMMEGIFICAAPMCLKSFLKKAEFMSH 324 + S R+ + Q + E FIC+ C K F K+ + H Sbjct: 240 KVFSR----KSRLNEHQRIHKREKSFICSE--CGKVFTMKSRLIEH 279
>ZN213_HUMAN (O14771) Zinc finger protein 213 (Putative transcription factor| CR53) Length = 459 Score = 29.3 bits (64), Expect = 5.5 Identities = 24/87 (27%), Positives = 34/87 (39%), Gaps = 8/87 (9%) Frame = +1 Query: 64 IGRRSRRPLGERVHICSRCEFPIAIYGRLIPCEHAF-------CLACARSDS-SCYLCDE 219 + R R GE+ H C C+ L+ + C C +S S S YL D Sbjct: 332 LARHQRTHTGEKPHKCPECDKSFRSSSDLVRHQGVHTGEKPFSCSECGKSFSRSAYLADH 391 Query: 220 RIQKIQTVKMMEGIFICAAPMCLKSFL 300 Q+I T + G C L+S+L Sbjct: 392 --QRIHTGEKPFGCSDCGKSFSLRSYL 416
>ICP0_HHV11 (P08393) Trans-acting transcriptional protein ICP0 (Immediate-early| protein IE110) (VMW110) (Alpha-0 protein) Length = 775 Score = 29.3 bits (64), Expect = 5.5 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 6/46 (13%) Frame = +1 Query: 106 ICSRCEFPIAIYGRL--IPCEHAFCLACARS----DSSCYLCDERI 225 +C+ C IA + R PC H FC+ C ++ ++C LC+ ++ Sbjct: 115 VCAVCTDEIAPHLRCDTFPCMHRFCIPCMKTWMQLRNTCPLCNAKL 160
>RAD18_DEBHA (Q6BLM3) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 491 Score = 29.3 bits (64), Expect = 5.5 Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 9/111 (8%) Frame = +1 Query: 94 ERVHICSR-CEFPIAIYGRLIPCEHAFCLACARS----DSSCYLC--DERIQKIQTVKMM 252 +R +IC + P+ + C H FC C R +S C LC ++ ++ V ++ Sbjct: 34 QRCYICKEFLKAPV-----ITSCNHTFCSHCIREYLIVNSHCPLCKAEQFESNLKRVILL 88 Query: 253 EGIFICAAPM--CLKSFLKKAEFMSHVPEAHANLLQSNTEKEERNEPDAPN 399 E I +C + L LKK E + + + ++ E+ + +P+ Sbjct: 89 EEIVLCFSKFRPILLELLKKEESNEAYDKNRSPFSEIPSKDEDSRKRSSPD 139
>EPC1_MOUSE (Q8C9X6) Enhancer of polycomb homolog 1| Length = 813 Score = 29.3 bits (64), Expect = 5.5 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 4/53 (7%) Frame = +1 Query: 274 APMCLKSF----LKKAEFMSHVPEAHANLLQSNTEKEERNEPDAPNISRASGG 420 +P L F L + +F S E + +L ++E EE N+PD P R G Sbjct: 356 SPAALPGFSAKDLNQYDFPSSDEEPLSQVLSGSSEAEEENDPDGPFAFRRKAG 408
>ZBTB3_HUMAN (Q9H5J0) Zinc finger and BTB domain-containing protein 3| Length = 574 Score = 29.3 bits (64), Expect = 5.5 Identities = 18/73 (24%), Positives = 34/73 (46%) Frame = +1 Query: 172 CLACARSDSSCYLCDERIQKIQTVKMMEGIFICAAPMCLKSFLKKAEFMSHVPEAHANLL 351 C C ++ S C +++ TV E + C CL+S+ + + H+ +AH Sbjct: 474 CKTCGKTFS----CSYTLRRHATVHTRERPYECR--YCLRSYTQSGDLYRHIRKAH---- 523 Query: 352 QSNTEKEERNEPD 390 N + +R++PD Sbjct: 524 --NEDLAKRSKPD 534
>ZN183_BOVIN (Q67ER4) Zinc finger protein 183| Length = 343 Score = 29.3 bits (64), Expect = 5.5 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 4/26 (15%) Frame = +1 Query: 157 CEHAFCLACA----RSDSSCYLCDER 222 C H FC +CA R+ CY+CD++ Sbjct: 277 CRHYFCESCALQHFRTTPRCYVCDQQ 302
>R113A_HUMAN (O15541) RING finger protein 113A (Zinc finger protein 183)| Length = 343 Score = 29.3 bits (64), Expect = 5.5 Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 4/26 (15%) Frame = +1 Query: 157 CEHAFCLACA----RSDSSCYLCDER 222 C H FC +CA R+ CY+CD++ Sbjct: 277 CRHYFCESCALQHFRTTPRCYVCDQQ 302
>ZN549_PONPY (Q5RBQ3) Zinc finger protein 549| Length = 640 Score = 29.3 bits (64), Expect = 5.5 Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 7/92 (7%) Frame = +1 Query: 70 RRSRRPLGERVHICSRC------EFPIAIYGRLIPCEHAF-CLACARSDSSCYLCDERIQ 228 R R GER + CS C + + + R+ E + C C ++ ++ +R+ Sbjct: 378 RHQRVHTGERAYQCSECGKSFIYKQSLLDHQRIHTGERPYECKECGKA----FIHKKRLL 433 Query: 229 KIQTVKMMEGIFICAAPMCLKSFLKKAEFMSH 324 + Q + E + C +C KSF++ +++M H Sbjct: 434 EHQRIHTGEKPYACI--ICGKSFIRSSDYMRH 463
>ZN592_HUMAN (Q92610) Zinc finger protein 592| Length = 1267 Score = 29.3 bits (64), Expect = 5.5 Identities = 20/78 (25%), Positives = 30/78 (38%) Frame = +1 Query: 244 KMMEGIFICAAPMCLKSFLKKAEFMSHVPEAHANLLQSNTEKEERNEPDAPNISRASGGD 423 K G+F C P C F++K E M HV H + N ++ + A S G Sbjct: 886 KTQVGVFKC--PECPLLFVQKPELMQHVKSTHG--VPRNVDELSNLQSSADTSSSRPGSR 941 Query: 424 TQRQSQCLNIYCTCSSRP 477 + ++ SS P Sbjct: 942 VPTEPPATSVAARSSSLP 959
>ASB11_MOUSE (Q9CQ31) Ankyrin repeat and SOCS box protein 11 (ASB-11)| Length = 323 Score = 29.3 bits (64), Expect = 5.5 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 11/75 (14%) Frame = -2 Query: 384 FITFFFLRVTLEEICMSFRYMRHKFSFLKERLEAHR-----------CSADKNPFHHFHS 238 F TFFF ++ ++ + + H + R EA R C AD++P H + Sbjct: 18 FATFFFFKLLIK---VFLALLTHFYIVKGNRKEAARIAEEIYGGLSDCWADRSPLHEAAA 74 Query: 237 LNLLNALITKIAAGI 193 L AL T IA GI Sbjct: 75 QGRLLALKTLIAQGI 89
>ZBTB3_MOUSE (Q91X45) Zinc finger and BTB domain-containing protein 3| Length = 518 Score = 29.3 bits (64), Expect = 5.5 Identities = 18/73 (24%), Positives = 34/73 (46%) Frame = +1 Query: 172 CLACARSDSSCYLCDERIQKIQTVKMMEGIFICAAPMCLKSFLKKAEFMSHVPEAHANLL 351 C C ++ S C +++ TV E + C CL+S+ + + H+ +AH Sbjct: 420 CKTCGKTFS----CSYTLRRHATVHTRERPYECR--YCLRSYTQSGDLYRHIRKAH---- 469 Query: 352 QSNTEKEERNEPD 390 N + +R++PD Sbjct: 470 --NEDLAKRSKPD 480
>EPC1_HUMAN (Q9H2F5) Enhancer of polycomb homolog 1| Length = 836 Score = 28.9 bits (63), Expect = 7.2 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = +1 Query: 271 AAPMCLKSFLKKAEFMSHVPEAHANLLQSNTEKEERNEPDAPNISRASGG 420 A P+ L + +F S E + +L ++E EE N+PD P R G Sbjct: 360 ALPVFNAKDLNQYDFPSSDEEPLSQVLSGSSEAEEDNDPDGPFAFRRKAG 409
>RNF13_CHICK (Q90972) RING finger protein 13 (C-RZF)| Length = 381 Score = 28.9 bits (63), Expect = 7.2 Identities = 28/125 (22%), Positives = 48/125 (38%), Gaps = 21/125 (16%) Frame = +1 Query: 91 GERVHICSRC--EFPIAIYGRLIPCEHAFCLAC-----ARSDSSCYLCDERI-------- 225 G+ +C+ C E+ R++PC HA+ C ++ +C +C +++ Sbjct: 234 GDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSD 293 Query: 226 ------QKIQTVKMMEGIFICAAPMCLKSFLKKAEFMSHVPEAHANLLQSNTEKEERNEP 387 Q+ V + A + +SF +E SH Q+ TE E E Sbjct: 294 SETDSSQEENEVSENTPLLRPLASVSTQSFGALSESHSH---------QNMTESSEYEED 344 Query: 388 DAPNI 402 D NI Sbjct: 345 DNDNI 349
>MKRN1_MOUSE (Q9QXP6) Makorin-1| Length = 481 Score = 28.9 bits (63), Expect = 7.2 Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 2/78 (2%) Frame = +1 Query: 139 YGRLIPCEHAFCLACARSDSSCYLCDERIQKIQTVKMMEGIFICAAPMC--LKSFLKKAE 312 +G L C H +CL C I+K ++ K E I + P C +F+ +E Sbjct: 299 FGILSNCNHTYCLKC-------------IRKWRSAKQFESKIIKSCPECRITSNFVIPSE 345 Query: 313 FMSHVPEAHANLLQSNTE 366 + E L+Q E Sbjct: 346 YWVEEKEEKQKLIQKYKE 363
>SUHW_DROAN (Q08875) Protein suppressor of hairy wing| Length = 886 Score = 28.9 bits (63), Expect = 7.2 Identities = 12/30 (40%), Positives = 14/30 (46%) Frame = +1 Query: 31 VTNSAIAATRAIGRRSRRPLGERVHICSRC 120 V N A A + R +R GER H C C Sbjct: 474 VCNQAFAVKEVLNRHMKRHTGERPHKCEEC 503
>RN139_HUMAN (Q8WU17) RING finger protein 139 (Translocation in renal carcinoma| on chromosome 8) Length = 664 Score = 28.9 bits (63), Expect = 7.2 Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 4/44 (9%) Frame = +1 Query: 106 ICSRCEFPIAIYGRLIPCEHAFCLACARS----DSSCYLCDERI 225 +C+ C R+ PC H F C R +C +C +++ Sbjct: 546 VCAICYHEFTTSARITPCNHYFHALCLRKWLYIQDTCPMCHQKV 589
>RAD18_ASHGO (Q75EN0) Postreplication repair ubiquitin-protein ligase E3 RAD18| (EC 6.-.-.-) Length = 443 Score = 28.9 bits (63), Expect = 7.2 Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 5/112 (4%) Frame = +1 Query: 97 RVHICS-RCEFPIAIYGRLIPCEHAFCLACAR----SDSSCYLCDERIQKIQTVKMMEGI 261 R HIC + P+ L C H FC C R +S C LC +++ K Sbjct: 31 RCHICKDMLQTPV-----LTQCGHTFCSLCIREYLNKESRCPLCLAELRQNMLQKEFLVG 85 Query: 262 FICAAPMCLKSFLKKAEFMSHVPEAHANLLQSNTEKEERNEPDAPNISRASG 417 + A M L++ L E + P+ A ++Q+N+ E ++ + I +G Sbjct: 86 ELAACYMELRARL--LETVRIPPKKVAEVVQNNSPIELDSDGEVEIIESCTG 135
>MYLIP_HUMAN (Q8WY64) Ubiquitin ligase MYLIP (EC 6.3.2.-) (Myosin regulatory| light chain-interacting protein) (MIR) Length = 445 Score = 28.9 bits (63), Expect = 7.2 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%) Frame = +1 Query: 154 PCEHAFCL-ACARSDSSCYLCDERIQKIQTV 243 PC H C +CA SC +C R++ +Q V Sbjct: 401 PCGHTVCCESCAAQLQSCPVCRSRVEHVQHV 431
>K1C18_RAT (Q5BJY9) Keratin, type I cytoskeletal 18 (Cytokeratin-18) (CK-18)| (Keratin-18) (K18) Length = 422 Score = 28.9 bits (63), Expect = 7.2 Identities = 22/73 (30%), Positives = 36/73 (49%) Frame = +1 Query: 40 SAIAATRAIGRRSRRPLGERVHICSRCEFPIAIYGRLIPCEHAFCLACARSDSSCYLCDE 219 S +A TRA G+R + ++I + E IA Y RL+ F L A S+ + Sbjct: 339 SELAQTRAEGQRQTQEYEALLNIKVKLEAEIATYRRLLEDGDDFSLNDALDSSNSM---Q 395 Query: 220 RIQKIQTVKMMEG 258 +Q+ T K+++G Sbjct: 396 TVQRTTTRKVVDG 408
>ZFP_IRV6 (P47732) Zinc finger protein| Length = 208 Score = 28.9 bits (63), Expect = 7.2 Identities = 15/45 (33%), Positives = 19/45 (42%) Frame = +1 Query: 109 CSRCEFPIAIYGRLIPCEHAFCLACARSDSSCYLCDERIQKIQTV 243 C C F I LIPC H+ C C +C +C KI + Sbjct: 163 CKIC-FTNKITKVLIPCGHSSCYECVFKLQTCPICKNNFIKINNL 206
>MKRN1_MACEU (Q9TT91) Makorin-1| Length = 478 Score = 28.9 bits (63), Expect = 7.2 Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 2/78 (2%) Frame = +1 Query: 139 YGRLIPCEHAFCLACARSDSSCYLCDERIQKIQTVKMMEGIFICAAPMC--LKSFLKKAE 312 +G L C H +CL C I+K ++ K E I + P C +F+ +E Sbjct: 295 FGILSNCNHTYCLKC-------------IRKWRSAKQFESKIIKSCPECRITSNFVIPSE 341 Query: 313 FMSHVPEAHANLLQSNTE 366 + E L+Q E Sbjct: 342 YWVEEKEEKQKLIQKYKE 359
>PEX2_RAT (P24392) Peroxisome assembly factor 1 (PAF-1) (Peroxin-2)| (Peroxisomal membrane protein 3) Length = 305 Score = 28.9 bits (63), Expect = 7.2 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 7/60 (11%) Frame = +1 Query: 88 LGERVHICSRC-EFPIAIYGRLIPCEHAFCLACARSD------SSCYLCDERIQKIQTVK 246 LG C+ C E+P + I CEH FC C +S +C C + +Q +K Sbjct: 237 LGSSGKECALCGEWPTMPH--TIGCEHVFCYYCVKSSFLFDMYFTCPKCGTEVHSVQPLK 294
>PEX2_MOUSE (P55098) Peroxisome assembly factor 1 (PAF-1) (Peroxin-2)| (Peroxisomal membrane protein 3) Length = 305 Score = 28.9 bits (63), Expect = 7.2 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 7/60 (11%) Frame = +1 Query: 88 LGERVHICSRC-EFPIAIYGRLIPCEHAFCLACARSD------SSCYLCDERIQKIQTVK 246 LG C+ C E+P + I CEH FC C +S +C C + +Q +K Sbjct: 237 LGSSGKECALCGEWPTMPH--TIGCEHVFCYYCVKSSFLFDIYFTCPKCGTEVHSVQPLK 294
>PEX2_HUMAN (P28328) Peroxisome assembly factor 1 (PAF-1) (Peroxin-2)| (Peroxisomal membrane protein 3) (35 kDa peroxisomal membrane protein) (RING finger protein 72) Length = 305 Score = 28.9 bits (63), Expect = 7.2 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 7/53 (13%) Frame = +1 Query: 109 CSRC-EFPIAIYGRLIPCEHAFCLACARSD------SSCYLCDERIQKIQTVK 246 C+ C E+P + I CEH FC CA+S +C C + +Q +K Sbjct: 244 CALCGEWPTMPH--TIGCEHIFCYFCAKSSFLFDVYFTCPKCGTEVHSLQPLK 294
>RN139_MOUSE (Q7TMV1) RING finger protein 139| Length = 668 Score = 28.9 bits (63), Expect = 7.2 Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 4/44 (9%) Frame = +1 Query: 106 ICSRCEFPIAIYGRLIPCEHAFCLACARS----DSSCYLCDERI 225 +C+ C R+ PC H F C R +C +C +++ Sbjct: 546 VCAICYHEFTTSARITPCNHYFHALCLRKWLYIQDTCPMCHQKV 589
>ASB11_PONPY (Q5RFS1) Ankyrin repeat and SOCS box protein 11 (ASB-11)| Length = 323 Score = 28.9 bits (63), Expect = 7.2 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 11/75 (14%) Frame = -2 Query: 384 FITFFFLRVTLEEICMSFRYMRHKFSFLKERLEAHR-----------CSADKNPFHHFHS 238 F TFFF ++ ++ + + H + R EA R C AD++P H + Sbjct: 18 FATFFFFKLLIK---VFLALLTHFYIVKGNRKEAARIAEEIYGGISDCWADRSPLHEAAA 74 Query: 237 LNLLNALITKIAAGI 193 L AL T IA G+ Sbjct: 75 QGRLLALKTLIAQGV 89
>ASB11_HUMAN (Q8WXH4) Ankyrin repeat and SOCS box protein 11 (ASB-11)| Length = 323 Score = 28.9 bits (63), Expect = 7.2 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 11/75 (14%) Frame = -2 Query: 384 FITFFFLRVTLEEICMSFRYMRHKFSFLKERLEAHR-----------CSADKNPFHHFHS 238 F TFFF ++ ++ + + H + R EA R C AD++P H + Sbjct: 18 FATFFFFKLLIK---VFLALLTHFYIVKGNRKEAARIAEEIYGGISDCWADRSPLHEAAA 74 Query: 237 LNLLNALITKIAAGI 193 L AL T IA G+ Sbjct: 75 QGRLLALKTLIAQGV 89
>PCGF2_HUMAN (P35227) Polycomb group RING finger protein 2 (DNA-binding protein| Mel-18) (RING finger protein 110) (Zinc finger protein 144) Length = 344 Score = 28.5 bits (62), Expect = 9.4 Identities = 23/104 (22%), Positives = 42/104 (40%), Gaps = 11/104 (10%) Frame = +1 Query: 106 ICSRCEFPIAIYGRLIPCEHAFCLAC----ARSDSSCYLCDERIQK------IQTVKMME 255 +C+ C ++ C H+FC C ++ C +CD ++ K I++ K ++ Sbjct: 17 MCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTLQ 76 Query: 256 GIFICAAPMCLKSFLK-KAEFMSHVPEAHANLLQSNTEKEERNE 384 I P K +K + +F + P N E+R E Sbjct: 77 DIVYKLVPGLFKDEMKRRRDFYAAYPLTEV----PNGSNEDRGE 116
>RN146_RAT (Q5XIK5) RING finger protein 146| Length = 352 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 4/40 (10%) Frame = +1 Query: 118 CEFPIAIYGRLIPCEHAFCLACARSDS----SCYLCDERI 225 C P+++ PC+H FC C + S C LC + I Sbjct: 43 CVHPVSL-----PCKHVFCYLCVKGASWLGKRCALCRQEI 77
>HAIR_MOUSE (Q61645) Protein hairless| Length = 1182 Score = 28.5 bits (62), Expect = 9.4 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%) Frame = +1 Query: 103 HICSRCEFPIA-IYGRLIPCEHAFCLACAR 189 H CSRC + + R C H C+AC R Sbjct: 593 HCCSRCHHGLFNTHWRCSHCSHRLCVACGR 622
>CP2C4_RABIT (P11371) Cytochrome P450 2C4 (EC 1.14.14.1) (CYPIIC4) (Progesterone| 21-hydroxylase) (P450 PBC4) (P1-88) Length = 487 Score = 28.5 bits (62), Expect = 9.4 Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 8/101 (7%) Frame = +1 Query: 79 RRPLGERVHICSRCEFPIAIYGRLIPCEHAFCLACARSDSSCYLC--------DERIQKI 234 +R + +RV +RC +PC+ F L CA + C + DE K+ Sbjct: 138 KRSIEDRVQEEARCLVEELRKTNALPCDPTFILGCAPCNVICSVILHNRFDYKDEEFLKL 197 Query: 235 QTVKMMEGIFICAAPMCLKSFLKKAEFMSHVPEAHANLLQS 357 ++ E I I ++P L+ + + + P H LL++ Sbjct: 198 ME-RLNENIRILSSPW-LQVYNNFPALLDYFPGIHKTLLKN 236
>TRI22_HUMAN (Q8IYM9) Tripartite motif protein 22 (RING finger protein 94) (50| kDa-stimulated trans-acting factor) (Staf-50) Length = 498 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 11/37 (29%) Frame = +1 Query: 151 IPCEHAFCLAC-----------ARSDSSCYLCDERIQ 228 + C H+FC AC +R +SSC +C R Q Sbjct: 28 LDCGHSFCQACITAKIKESVIISRGESSCPVCQTRFQ 64
>PCGF2_MOUSE (P23798) Polycomb group RING finger protein 2 (DNA-binding protein| Mel-18) (RING finger protein 110) (Zinc finger protein 144) (Zfp-144) Length = 342 Score = 28.5 bits (62), Expect = 9.4 Identities = 23/104 (22%), Positives = 42/104 (40%), Gaps = 11/104 (10%) Frame = +1 Query: 106 ICSRCEFPIAIYGRLIPCEHAFCLAC----ARSDSSCYLCDERIQK------IQTVKMME 255 +C+ C ++ C H+FC C ++ C +CD ++ K I++ K ++ Sbjct: 17 MCALCGGYFIDATTIVECLHSFCKTCIVRYLETNKYCPMCDVQVHKTRPLLSIRSDKTLQ 76 Query: 256 GIFICAAPMCLKSFLK-KAEFMSHVPEAHANLLQSNTEKEERNE 384 I P K +K + +F + P N E+R E Sbjct: 77 DIVYKLVPGLFKDEMKRRRDFYAAYPLTEV----PNGSNEDRGE 116
>ZN615_HUMAN (Q8N8J6) Zinc finger protein 615| Length = 555 Score = 28.5 bits (62), Expect = 9.4 Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 7/85 (8%) Frame = +1 Query: 91 GERVHICSRCEFPIAIYGRLI-------PCEHAFCLACARSDSSCYLCDERIQKIQTVKM 249 GE+ H+CS C + RL+ +H C C ++ +L ++ Q M Sbjct: 52 GEKPHVCSMCGKAFSRKSRLMDHQRTHTELKHYECTECDKT----FLKKSQLNIHQKTHM 107 Query: 250 MEGIFICAAPMCLKSFLKKAEFMSH 324 + C+ C K+F+KK + H Sbjct: 108 GGKPYTCS--QCGKAFIKKCRLIYH 130
>HAIR_RAT (P97609) Protein hairless| Length = 1181 Score = 28.5 bits (62), Expect = 9.4 Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%) Frame = +1 Query: 103 HICSRCEFPIA-IYGRLIPCEHAFCLACAR 189 H CSRC + + R C H C+AC R Sbjct: 592 HCCSRCHHGLFNTHWRCSHCSHRLCVACGR 621
>CAF1A_HUMAN (Q13111) Chromatin assembly factor 1 subunit A (CAF-1 subunit A)| (Chromatin assembly factor I p150 subunit) (CAF-I 150 kDa subunit) (CAF-Ip150) Length = 938 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/40 (32%), Positives = 20/40 (50%) Frame = +1 Query: 271 AAPMCLKSFLKKAEFMSHVPEAHANLLQSNTEKEERNEPD 390 A MC+ F+KK + + Q++TE+EE E D Sbjct: 856 AGSMCITQFMKKRRHDGQIGAEDMDGFQADTEEEEEEEGD 895
>GLI1_HUMAN (P08151) Zinc finger protein GLI1 (Glioma-associated oncogene)| (Oncogene GLI) Length = 1106 Score = 28.5 bits (62), Expect = 9.4 Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 3/86 (3%) Frame = +1 Query: 157 CEHAFCLACARSDSSCYLCDERIQKIQTVKMMEGIFICAAPMCLKSFLKKAEFMSHVPEA 336 CEH C + A S++S +R + E ++C P C K + + HV Sbjct: 333 CEHEGC-SKAFSNAS-----DRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 386 Query: 337 HANLLQSNTEKEERNE---PDAPNIS 405 H ++ K R + P AP+IS Sbjct: 387 HGP--DAHVTKRHRGDGPLPRAPSIS 410
>RN146_MOUSE (Q9CZW6) RING finger protein 146| Length = 359 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 4/40 (10%) Frame = +1 Query: 118 CEFPIAIYGRLIPCEHAFCLACARSDS----SCYLCDERI 225 C P+++ PC+H FC C + S C LC + I Sbjct: 45 CVHPVSL-----PCKHVFCYLCVKGASWLGKRCALCRQEI 79
>RN146_HUMAN (Q9NTX7) RING finger protein 146 (Dactylidin)| Length = 359 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 4/40 (10%) Frame = +1 Query: 118 CEFPIAIYGRLIPCEHAFCLACARSDS----SCYLCDERI 225 C P+++ PC+H FC C + S C LC + I Sbjct: 44 CVHPVSL-----PCKHVFCYLCVKGASWLGKRCALCRQEI 78
>RREB1_HUMAN (Q92766) RAS-responsive element-binding protein 1 (RREB-1)| (Raf-responsive zinc finger protein LZ321) Length = 755 Score = 28.5 bits (62), Expect = 9.4 Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 8/88 (9%) Frame = +1 Query: 202 CYLCDERIQKIQTV----KMMEGIFICAAPMCLKSFLKKAEFMSHV----PEAHANLLQS 357 C +C++R +Q + + G C ++F K + H HA Sbjct: 582 CSVCNKRFWSLQDLTRHMRSHTGERPYKCQTCERTFTLKHSLVRHQRIHQKARHAKHHGK 641 Query: 358 NTEKEERNEPDAPNISRASGGDTQRQSQ 441 +++KEER E D+ N S SG + +++ Sbjct: 642 DSDKEERGEEDSENESTHSGNNAVSENE 669
>BARD1_RAT (Q9QZH2) BRCA1-associated RING domain protein 1 (BARD-1)| Length = 768 Score = 28.5 bits (62), Expect = 9.4 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 8/62 (12%) Frame = +1 Query: 52 ATRAIGRRSRRPLG--ERVHICSRC----EFPIAIYGRLIPCEHAFCLACARS--DSSCY 207 AT + SR L E++ CSRC P+ + G CEH FC C S C Sbjct: 23 ATDGLWAHSRAALARLEKLLRCSRCANILREPVCLGG----CEHIFCSGCISDCVGSGCP 78 Query: 208 LC 213 +C Sbjct: 79 VC 80
>ASR1_ASHGO (Q75DC2) Alcohol-sensitive RING finger protein 1| Length = 328 Score = 28.5 bits (62), Expect = 9.4 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 9/44 (20%) Frame = +1 Query: 109 CSRC--EFPIAIYGRLIPCEHAFCLACAR-------SDSSCYLC 213 CS C P + GRL+PC H + LAC R + SC +C Sbjct: 18 CSICWESMPSGV-GRLMPCGHEYHLACIRKWFHLHSGNRSCPVC 60
>SYN3_MOUSE (Q8JZP2) Synapsin-3 (Synapsin III)| Length = 579 Score = 28.5 bits (62), Expect = 9.4 Identities = 14/42 (33%), Positives = 26/42 (61%) Frame = +1 Query: 352 QSNTEKEERNEPDAPNISRASGGDTQRQSQCLNIYCTCSSRP 477 QS + +++R+ P +P +SRASGG + Q+ + + +RP Sbjct: 471 QSGSPQQQRS-PGSPQLSRASGGSSPNQASKPSASLSSHNRP 511
>SLT11_SCHPO (O59800) Pre-mRNA-splicing factor slt11 (Complexed with cdc5| protein 5) (Cell cycle control protein cwf5) Length = 354 Score = 28.5 bits (62), Expect = 9.4 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 5/53 (9%) Frame = +1 Query: 70 RRSRRPLGERVHICSRCEFPIAIYGRL-----IPCEHAFCLACARSDSSCYLC 213 R ++ PLG+ ICS+ P I+ + P + C+ CAR + C C Sbjct: 34 RMTKEPLGQECKICSK---PCTIFRWIKERGQKPGKTQICVGCARYKNCCQSC 83
>RN146_PONPY (Q5REL3) RING finger protein 146| Length = 358 Score = 28.5 bits (62), Expect = 9.4 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 4/40 (10%) Frame = +1 Query: 118 CEFPIAIYGRLIPCEHAFCLACARSDS----SCYLCDERI 225 C P+++ PC+H FC C + S C LC + I Sbjct: 43 CVHPVSL-----PCKHVFCYLCVKGASWLGKRCALCRQEI 77
>ORC1_DROME (O16810) Origin recognition complex subunit 1 (DmORC1)| Length = 924 Score = 28.5 bits (62), Expect = 9.4 Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 11/97 (11%) Frame = +1 Query: 193 DSSCYLCDERIQKIQTVKMMEGIFICAAPMCLKSFLKKAEFMSHVPEAHANLLQSNTEKE 372 D + ++C+ K+ +K++ G +S ++ +E + PE +AN L ++ E Sbjct: 252 DVNSFICEN---KVSPIKIVGG----------RSVVRLSE-KKNAPEINANYLPASPLTE 297 Query: 373 ERNEPDAP-----------NISRASGGDTQRQSQCLN 450 + + + P N+S G DT S CLN Sbjct: 298 KNAKVETPKSRASAARRNLNLSLDRGADTTADSDCLN 334 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 55,030,953 Number of Sequences: 219361 Number of extensions: 933308 Number of successful extensions: 3617 Number of sequences better than 10.0: 87 Number of HSP's better than 10.0 without gapping: 3492 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3603 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3188886965 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
