ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast74b02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_197151.1| Oryza sativa (japonica cultivar-group) hypothet... 529 e-147
2gb|AC068950.11| Oryza sativa chromosome 10 BAC OSJNBa0041P03 gen... 250 4e-63
3dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 250 4e-63
4gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 250 4e-63
5ref|NM_120194.3| Arabidopsis thaliana unknown protein AT5G01160 ... 80 7e-12
6gb|BT024744.1| Arabidopsis thaliana At5g01160 mRNA, complete cds 80 7e-12
7emb|BX830386.1|CNS0A1NT Arabidopsis thaliana Full-length cDNA Co... 80 7e-12
8emb|BX829595.1|CNS0A016 Arabidopsis thaliana Full-length cDNA Co... 80 7e-12
9emb|BX830977.1|CNS09ZGT Arabidopsis thaliana Full-length cDNA Co... 80 7e-12
10emb|BX831309.1|CNS09YM5 Arabidopsis thaliana Full-length cDNA Co... 80 7e-12
11gb|AY084366.1| Arabidopsis thaliana clone 105564 mRNA, complete ... 80 7e-12
12emb|BX831546.1|CNS09ZU6 Arabidopsis thaliana Full-length cDNA Co... 72 2e-09
13emb|BX833520.1|CNS09ZBT Arabidopsis thaliana Full-length cDNA Co... 64 4e-07
14emb|AL137189.2|ATF7J8 Arabidopsis thaliana DNA chromosome 5, BAC... 54 4e-04
15ref|XM_591299.2| PREDICTED: Bos taurus similar to CG5514-PB, iso... 44 0.41
16gb|BC114807.1| Bos taurus cDNA clone MGC:140092 IMAGE:8056482, c... 44 0.41
17gb|AC152827.4| Mus musculus BAC clone RP23-60K23 from chromosome... 44 0.41
18dbj|AK036853.1| Mus musculus adult female vagina cDNA, RIKEN ful... 44 0.41
19emb|AL596265.12| Mouse DNA sequence from clone RP23-134O19 on ch... 44 0.41
20ref|NM_185673.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
21emb|BX322613.6| Human DNA sequence from clone RP11-745D9 on chro... 42 1.6
22gb|AC128676.2| Homo sapiens BAC clone RP11-65G11 from UL, comple... 42 1.6
23gb|AC125787.2| Homo sapiens chromosome 5 clone CTD-2137I20, comp... 42 1.6
24gb|AC119042.9| Homo sapiens 12 BAC RP11-657P13 (Roswell Park Can... 42 1.6
25gb|AE012441.1| Xanthomonas campestris pv. campestris str. ATCC 3... 42 1.6
26gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 42 1.6
27dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
28gb|AC026131.4| Homo sapiens chromosome 11, clone RP11-458M15, co... 42 1.6
29dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
30dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
31gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 42 1.6
32gb|AY689437.1| Deerpox virus W-1170-84, complete genome 40 6.5
33ref|XM_370524.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 6.5
34gb|AC102745.10| Mus musculus chromosome 17, clone RP24-371L2, co... 40 6.5
35gb|AC126424.12| Mus musculus chromosome 17, clone RP23-19K10, co... 40 6.5
36gb|AC003009.1|HUAC003009 Homo sapiens Chromosome 16 BAC clone CI... 40 6.5
37emb|AL591379.18| Human DNA sequence from clone RP11-381O7 on chr... 40 6.5
38emb|AL583828.4| Human DNA sequence from clone RP11-501I19 on chr... 40 6.5
39emb|AL445665.20| Human DNA sequence from clone RP11-574E24 on ch... 40 6.5
40emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 6.5
41emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 6.5
42emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete ... 40 6.5
43emb|AL590711.7| Human DNA sequence from clone RP11-284O18 on chr... 40 6.5
44gb|AC136499.2| Homo sapiens chromosome 19 clone RP11-240C14, com... 40 6.5
45gb|AC117415.7| Homo sapiens 3 BAC RP11-43F17 (Roswell Park Cance... 40 6.5
46gb|AC022167.7| Homo sapiens chromosome 16 clone RP11-77H9, compl... 40 6.5
47gb|AC010305.3|AC010305 Homo sapiens chromosome 16 clone CTB-45A8... 40 6.5
48dbj|AP003017.1| Mesorhizobium loti MAFF303099 plasmid pMLb DNA, ... 40 6.5
49emb|AJ326764.1|HSA326764 Homo sapiens genomic sequence surroundi... 40 6.5
50emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 6.5
51emb|CT033750.18| Mouse DNA sequence from clone RP23-263M5 on chr... 40 6.5 
>ref|NM_197151.1| Oryza sativa (japonica cultivar-group) hypothetical protein
           (OSJNBa0041P03.16), mRNA
          Length = 1509

 Score =  529 bits (267), Expect = e-147
 Identities = 424/473 (89%), Gaps = 5/473 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   gacctcgccgtggcgaagagcctcggcgccgtaacaaactccgccatcgccgcgacgcgc 60
           |||||||||||||| ||||||||||||||||| || | ||||||| |||| ||  | |||
Sbjct: 214 gacctcgccgtggcaaagagcctcggcgccgtcacgacctccgccgtcgcggccgcccgc 273

                                                                       
Query: 61  gccattggccgccgctcccgccggcccctcggcgagcgcgtccacatctgctcccgctgc 120
            |||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 274 accatcggccgccgctcccgccgccccctcggcgagcgcgtccacatctgctgccgctgc 333

                                                                       
Query: 121 gagttccccatcgccatttacggccgcctcattccttgcgaacatgctttctgtttagcc 180
           ||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 334 gagttccccatcgccctctacggccgcctcattccttgtgaacatgctttctgtttagcc 393

                                                                       
Query: 181 tgtgcaagaagtgattccagctgctatctttgtgatgagcgcattcagaagattcagact 240
           ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 394 tgtgctagaagtgattccagctgctatctttgtgatgagcgcattcagaagattcaaact 453

                                                                       
Query: 241 gtgaaaatgatggaagggatttttatctgcgctgcacctatgtgcctcaagtctttcctt 300
           ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 454 gtgaaaatgatggaagggatttttatctgtgctgcacctatgtgtctcaagtctttcctt 513

                                                                       
Query: 301 aagaaagctgaatttatgtctcatgtacctgaagctcatgcaaatctcctccaaagtaac 360
           |||| | ||||||||   |||||| ||||||||| |||||| || ||||| || | ||  
Sbjct: 514 aagagatctgaatttgattctcatatacctgaagttcatgccaacctcctgcacaatact 573

                                                                       
Query: 361 acggagaaagaagaacgtaatgaaccagatgctcctaacatctcccgtgcttctggagga 420
            | ||||  |||||||||||||| ||||||||||||||||| |||||||||||||| || 
Sbjct: 574 ccagagagggaagaacgtaatgagccagatgctcctaacatttcccgtgcttctgggggt 633

                                                                
Query: 421 gatactcaaaggcaatctca-atgcctg-aatatctactgcacgtgctcctcc 471
           ||   |||||| |||||||| ||||||| ||| ||||||||||||||||||||
Sbjct: 634 ga---tcaaagacaatctcagatgcctgaaatgtctactgcacgtgctcctcc 683
to top
>gb|AC068950.11| Oryza sativa chromosome 10 BAC OSJNBa0041P03 genomic sequence, complete
             sequence
          Length = 139614

 Score =  250 bits (126), Expect = 4e-63
 Identities = 232/264 (87%), Gaps = 5/264 (1%)
 Strand = Plus / Minus

                                                                         
Query: 210   ttgtgatgagcgcattcagaagattcagactgtgaaaatgatggaagggatttttatctg 269
             ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 69128 ttgtgatgagcgcattcagaagattcaaactgtgaaaatgatggaagggatttttatctg 69069

                                                                         
Query: 270   cgctgcacctatgtgcctcaagtctttccttaagaaagctgaatttatgtctcatgtacc 329
              |||||||||||||| ||||||||||||||||||| | ||||||||   |||||| ||||
Sbjct: 69068 tgctgcacctatgtgtctcaagtctttccttaagagatctgaatttgattctcatatacc 69009

                                                                         
Query: 330   tgaagctcatgcaaatctcctccaaagtaacacggagaaagaagaacgtaatgaaccaga 389
             ||||| |||||| || ||||| || | ||   | ||||  |||||||||||||| |||||
Sbjct: 69008 tgaagttcatgccaacctcctgcacaatactccagagagggaagaacgtaatgagccaga 68949

                                                                         
Query: 390   tgctcctaacatctcccgtgcttctggaggagatactcaaaggcaatctca-atgcctg- 447
             |||||||||||| |||||||||||||| || ||   |||||| |||||||| ||||||| 
Sbjct: 68948 tgctcctaacatttcccgtgcttctgggggtga---tcaaagacaatctcagatgcctga 68892

                                     
Query: 448   aatatctactgcacgtgctcctcc 471
             ||| ||||||||||||||||||||
Sbjct: 68891 aatgtctactgcacgtgctcctcc 68868



 Score =  178 bits (90), Expect = 1e-41
 Identities = 135/150 (90%)
 Strand = Plus / Minus

                                                                         
Query: 1     gacctcgccgtggcgaagagcctcggcgccgtaacaaactccgccatcgccgcgacgcgc 60
             |||||||||||||| ||||||||||||||||| || | ||||||| |||| ||  | |||
Sbjct: 71587 gacctcgccgtggcaaagagcctcggcgccgtcacgacctccgccgtcgcggccgcccgc 71528

                                                                         
Query: 61    gccattggccgccgctcccgccggcccctcggcgagcgcgtccacatctgctcccgctgc 120
              |||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 71527 accatcggccgccgctcccgccgccccctcggcgagcgcgtccacatctgctgccgctgc 71468

                                           
Query: 121   gagttccccatcgccatttacggccgcctc 150
             ||||||||||||||| | ||||||||||||
Sbjct: 71467 gagttccccatcgccctctacggccgcctc 71438



 Score =  101 bits (51), Expect = 2e-18
 Identities = 57/59 (96%)
 Strand = Plus / Minus

                                                                        
Query: 151   attccttgcgaacatgctttctgtttagcctgtgcaagaagtgattccagctgctatct 209
             |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 69994 attccttgtgaacatgctttctgtttagcctgtgctagaagtgattccagctgctatct 69936
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  250 bits (126), Expect = 4e-63
 Identities = 232/264 (87%), Gaps = 5/264 (1%)
 Strand = Plus / Plus

                                                                            
Query: 210      ttgtgatgagcgcattcagaagattcagactgtgaaaatgatggaagggatttttatctg 269
                ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 18281642 ttgtgatgagcgcattcagaagattcaaactgtgaaaatgatggaagggatttttatctg 18281701

                                                                            
Query: 270      cgctgcacctatgtgcctcaagtctttccttaagaaagctgaatttatgtctcatgtacc 329
                 |||||||||||||| ||||||||||||||||||| | ||||||||   |||||| ||||
Sbjct: 18281702 tgctgcacctatgtgtctcaagtctttccttaagagatctgaatttgattctcatatacc 18281761

                                                                            
Query: 330      tgaagctcatgcaaatctcctccaaagtaacacggagaaagaagaacgtaatgaaccaga 389
                ||||| |||||| || ||||| || | ||   | ||||  |||||||||||||| |||||
Sbjct: 18281762 tgaagttcatgccaacctcctgcacaatactccagagagggaagaacgtaatgagccaga 18281821

                                                                            
Query: 390      tgctcctaacatctcccgtgcttctggaggagatactcaaaggcaatctca-atgcctg- 447
                |||||||||||| |||||||||||||| || ||   |||||| |||||||| ||||||| 
Sbjct: 18281822 tgctcctaacatttcccgtgcttctgggggtga---tcaaagacaatctcagatgcctga 18281878

                                        
Query: 448      aatatctactgcacgtgctcctcc 471
                ||| ||||||||||||||||||||
Sbjct: 18281879 aatgtctactgcacgtgctcctcc 18281902



 Score =  178 bits (90), Expect = 1e-41
 Identities = 135/150 (90%)
 Strand = Plus / Plus

                                                                            
Query: 1        gacctcgccgtggcgaagagcctcggcgccgtaacaaactccgccatcgccgcgacgcgc 60
                |||||||||||||| ||||||||||||||||| || | ||||||| |||| ||  | |||
Sbjct: 18279583 gacctcgccgtggcaaagagcctcggcgccgtcacgacctccgccgtcgcggccgcccgc 18279642

                                                                            
Query: 61       gccattggccgccgctcccgccggcccctcggcgagcgcgtccacatctgctcccgctgc 120
                 |||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 18279643 accatcggccgccgctcccgccgccccctcggcgagcgcgtccacatctgctgccgctgc 18279702

                                              
Query: 121      gagttccccatcgccatttacggccgcctc 150
                ||||||||||||||| | ||||||||||||
Sbjct: 18279703 gagttccccatcgccctctacggccgcctc 18279732



 Score =  101 bits (51), Expect = 2e-18
 Identities = 57/59 (96%)
 Strand = Plus / Plus

                                                                           
Query: 151      attccttgcgaacatgctttctgtttagcctgtgcaagaagtgattccagctgctatct 209
                |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 18280776 attccttgtgaacatgctttctgtttagcctgtgctagaagtgattccagctgctatct 18280834
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  250 bits (126), Expect = 4e-63
 Identities = 232/264 (87%), Gaps = 5/264 (1%)
 Strand = Plus / Plus

                                                                            
Query: 210      ttgtgatgagcgcattcagaagattcagactgtgaaaatgatggaagggatttttatctg 269
                ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 18291295 ttgtgatgagcgcattcagaagattcaaactgtgaaaatgatggaagggatttttatctg 18291354

                                                                            
Query: 270      cgctgcacctatgtgcctcaagtctttccttaagaaagctgaatttatgtctcatgtacc 329
                 |||||||||||||| ||||||||||||||||||| | ||||||||   |||||| ||||
Sbjct: 18291355 tgctgcacctatgtgtctcaagtctttccttaagagatctgaatttgattctcatatacc 18291414

                                                                            
Query: 330      tgaagctcatgcaaatctcctccaaagtaacacggagaaagaagaacgtaatgaaccaga 389
                ||||| |||||| || ||||| || | ||   | ||||  |||||||||||||| |||||
Sbjct: 18291415 tgaagttcatgccaacctcctgcacaatactccagagagggaagaacgtaatgagccaga 18291474

                                                                            
Query: 390      tgctcctaacatctcccgtgcttctggaggagatactcaaaggcaatctca-atgcctg- 447
                |||||||||||| |||||||||||||| || ||   |||||| |||||||| ||||||| 
Sbjct: 18291475 tgctcctaacatttcccgtgcttctgggggtga---tcaaagacaatctcagatgcctga 18291531

                                        
Query: 448      aatatctactgcacgtgctcctcc 471
                ||| ||||||||||||||||||||
Sbjct: 18291532 aatgtctactgcacgtgctcctcc 18291555



 Score =  178 bits (90), Expect = 1e-41
 Identities = 135/150 (90%)
 Strand = Plus / Plus

                                                                            
Query: 1        gacctcgccgtggcgaagagcctcggcgccgtaacaaactccgccatcgccgcgacgcgc 60
                |||||||||||||| ||||||||||||||||| || | ||||||| |||| ||  | |||
Sbjct: 18288836 gacctcgccgtggcaaagagcctcggcgccgtcacgacctccgccgtcgcggccgcccgc 18288895

                                                                            
Query: 61       gccattggccgccgctcccgccggcccctcggcgagcgcgtccacatctgctcccgctgc 120
                 |||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 18288896 accatcggccgccgctcccgccgccccctcggcgagcgcgtccacatctgctgccgctgc 18288955

                                              
Query: 121      gagttccccatcgccatttacggccgcctc 150
                ||||||||||||||| | ||||||||||||
Sbjct: 18288956 gagttccccatcgccctctacggccgcctc 18288985



 Score =  101 bits (51), Expect = 2e-18
 Identities = 57/59 (96%)
 Strand = Plus / Plus

                                                                           
Query: 151      attccttgcgaacatgctttctgtttagcctgtgcaagaagtgattccagctgctatct 209
                |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 18290429 attccttgtgaacatgctttctgtttagcctgtgctagaagtgattccagctgctatct 18290487
to top
>ref|NM_120194.3| Arabidopsis thaliana unknown protein AT5G01160 mRNA, complete cds
          Length = 1403

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                       
Query: 190 agtgattccagctgctatctttgtgatgagcgcattcagaagattcagactgtgaaaatg 249
           |||||||||| ||||||||| ||||||||||| |||||||||||||| ||  | || |||
Sbjct: 487 agtgattccatctgctatctatgtgatgagcggattcagaagattcaaacaatcaagatg 546

                               
Query: 250 atggaagggatttttatctg 269
           ||||||||||| || |||||
Sbjct: 547 atggaagggatcttcatctg 566
to top
>gb|BT024744.1| Arabidopsis thaliana At5g01160 mRNA, complete cds
          Length = 1083

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                       
Query: 190 agtgattccagctgctatctttgtgatgagcgcattcagaagattcagactgtgaaaatg 249
           |||||||||| ||||||||| ||||||||||| |||||||||||||| ||  | || |||
Sbjct: 295 agtgattccatctgctatctatgtgatgagcggattcagaagattcaaacaatcaagatg 354

                               
Query: 250 atggaagggatttttatctg 269
           ||||||||||| || |||||
Sbjct: 355 atggaagggatcttcatctg 374
to top
>emb|BX830386.1|CNS0A1NT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB77ZD04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1259

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                       
Query: 190 agtgattccagctgctatctttgtgatgagcgcattcagaagattcagactgtgaaaatg 249
           |||||||||| ||||||||| ||||||||||| |||||||||||||| ||  | || |||
Sbjct: 455 agtgattccatctgctatctatgtgatgagcggattcagaagattcaaacaatcaagatg 514

                               
Query: 250 atggaagggatttttatctg 269
           ||||||||||| || |||||
Sbjct: 515 atggaagggatcttcatctg 534
to top
>emb|BX829595.1|CNS0A016 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB23ZF12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1288

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                       
Query: 190 agtgattccagctgctatctttgtgatgagcgcattcagaagattcagactgtgaaaatg 249
           |||||||||| ||||||||| ||||||||||| |||||||||||||| ||  | || |||
Sbjct: 395 agtgattccatctgctatctatgtgatgagcggattcagaagattcaaacaatcaagatg 454

                               
Query: 250 atggaagggatttttatctg 269
           ||||||||||| || |||||
Sbjct: 455 atggaagggatcttcatctg 474
to top
>emb|BX830977.1|CNS09ZGT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS44ZH06 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1263

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                       
Query: 190 agtgattccagctgctatctttgtgatgagcgcattcagaagattcagactgtgaaaatg 249
           |||||||||| ||||||||| ||||||||||| |||||||||||||| ||  | || |||
Sbjct: 369 agtgattccatctgctatctatgtgatgagcggattcagaagattcaaacaatcaagatg 428

                               
Query: 250 atggaagggatttttatctg 269
           ||||||||||| || |||||
Sbjct: 429 atggaagggatcttcatctg 448
to top
>emb|BX831309.1|CNS09YM5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS78ZA11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1226

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                       
Query: 190 agtgattccagctgctatctttgtgatgagcgcattcagaagattcagactgtgaaaatg 249
           |||||||||| ||||||||| ||||||||||| |||||||||||||| ||  | || |||
Sbjct: 360 agtgattccatctgctatctatgtgatgagcggattcagaagattcaaacaatcaagatg 419

                               
Query: 250 atggaagggatttttatctg 269
           ||||||||||| || |||||
Sbjct: 420 atggaagggatcttcatctg 439
to top
>gb|AY084366.1| Arabidopsis thaliana clone 105564 mRNA, complete sequence
          Length = 1278

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 70/80 (87%)
 Strand = Plus / Plus

                                                                       
Query: 190 agtgattccagctgctatctttgtgatgagcgcattcagaagattcagactgtgaaaatg 249
           |||||||||| ||||||||| ||||||||||| |||||||||||||| ||  | || |||
Sbjct: 370 agtgattccatctgctatctatgtgatgagcggattcagaagattcaaacaatcaagatg 429

                               
Query: 250 atggaagggatttttatctg 269
           ||||||||||| || |||||
Sbjct: 430 atggaagggatcttcatctg 449
to top
>emb|BX831546.1|CNS09ZU6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH14ZB07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1370

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 69/80 (86%)
 Strand = Plus / Plus

                                                                       
Query: 190 agtgattccagctgctatctttgtgatgagcgcattcagaagattcagactgtgaaaatg 249
           |||||||||| |||| |||| ||||||||||| |||||||||||||| ||  | || |||
Sbjct: 491 agtgattccatctgcgatctatgtgatgagcggattcagaagattcaaacaatcaagatg 550

                               
Query: 250 atggaagggatttttatctg 269
           ||||||||||| || |||||
Sbjct: 551 atggaagggatcttcatctg 570
to top
>emb|BX833520.1|CNS09ZBT Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL5ZF03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1342

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 65/76 (85%)
 Strand = Plus / Plus

                                                                       
Query: 194 attccagctgctatctttgtgatgagcgcattcagaagattcagactgtgaaaatgatgg 253
           |||||| ||||||||| ||| ||| |||||||||||||||||| ||  | || |||||||
Sbjct: 474 attccatctgctatctatgtcatgcgcgcattcagaagattcacacaatcaagatgatgg 533

                           
Query: 254 aagggatttttatctg 269
           ||||||| || |||||
Sbjct: 534 aagggatcttcatctg 549
to top
>emb|AL137189.2|ATF7J8 Arabidopsis thaliana DNA chromosome 5, BAC clone F7J8 (ESSA project)
          Length = 118507

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                        
Query: 211   tgtgatgagcgcattcagaagattcagactgtgaaaatgatggaagggatttttatctg 269
             ||||||||||| |||||||||||||| ||  | || |||||||||||||| || |||||
Sbjct: 50377 tgtgatgagcggattcagaagattcaaacaatcaagatgatggaagggatcttcatctg 50435
to top
>ref|XM_591299.2| PREDICTED: Bos taurus similar to CG5514-PB, isoform B (LOC540063),
           mRNA
          Length = 1656

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 67  ggccgccgctcccgccggcccc 88
           ||||||||||||||||||||||
Sbjct: 118 ggccgccgctcccgccggcccc 97
to top
>gb|BC114807.1| Bos taurus cDNA clone MGC:140092 IMAGE:8056482, complete cds
          Length = 1504

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 67  ggccgccgctcccgccggcccc 88
           ||||||||||||||||||||||
Sbjct: 253 ggccgccgctcccgccggcccc 232
to top
>gb|AC152827.4| Mus musculus BAC clone RP23-60K23 from chromosome 12, complete sequence
          Length = 195066

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 67     ggccgccgctcccgccggcccc 88
              ||||||||||||||||||||||
Sbjct: 103344 ggccgccgctcccgccggcccc 103323
to top
>dbj|AK036853.1| Mus musculus adult female vagina cDNA, RIKEN full-length enriched
           library, clone:9930018I23 product:hypothetical protein,
           full insert sequence
          Length = 2180

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 67  ggccgccgctcccgccggcccc 88
           ||||||||||||||||||||||
Sbjct: 522 ggccgccgctcccgccggcccc 543
to top
>emb|AL596265.12| Mouse DNA sequence from clone RP23-134O19 on chromosome 12, complete
              sequence
          Length = 205332

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 67     ggccgccgctcccgccggcccc 88
              ||||||||||||||||||||||
Sbjct: 203190 ggccgccgctcccgccggcccc 203211
to top
>ref|NM_185673.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 456

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                               
Query: 43 gccatcgccgcgacgcgcgcc 63
          |||||||||||||||||||||
Sbjct: 89 gccatcgccgcgacgcgcgcc 69
to top
>emb|BX322613.6| Human DNA sequence from clone RP11-745D9 on chromosome 10 Contains a
             CpG island, complete sequence
          Length = 191752

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 207   tctttgtgatgagcgcattca 227
             |||||||||||||||||||||
Sbjct: 91991 tctttgtgatgagcgcattca 91971
to top
>gb|AC128676.2| Homo sapiens BAC clone RP11-65G11 from UL, complete sequence
          Length = 159143

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 207   tctttgtgatgagcgcattca 227
             |||||||||||||||||||||
Sbjct: 54636 tctttgtgatgagcgcattca 54616
to top
>gb|AC125787.2| Homo sapiens chromosome 5 clone CTD-2137I20, complete sequence
          Length = 117180

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 207   tctttgtgatgagcgcattca 227
             |||||||||||||||||||||
Sbjct: 12962 tctttgtgatgagcgcattca 12942
to top
>gb|AC119042.9| Homo sapiens 12 BAC RP11-657P13 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 112400

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 207    tctttgtgatgagcgcattca 227
              |||||||||||||||||||||
Sbjct: 106866 tctttgtgatgagcgcattca 106886
to top
>gb|AE012441.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 349
            of 460 of the complete genome
          Length = 12660

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 43   gccatcgccgcgacgcgcgcc 63
            |||||||||||||||||||||
Sbjct: 2545 gccatcgccgcgacgcgcgcc 2565
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 43      gccatcgccgcgacgcgcgcc 63
               |||||||||||||||||||||
Sbjct: 1137680 gccatcgccgcgacgcgcgcc 1137700
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 43      gccatcgccgcgacgcgcgcc 63
               |||||||||||||||||||||
Sbjct: 3458060 gccatcgccgcgacgcgcgcc 3458080
to top
>gb|AC026131.4| Homo sapiens chromosome 11, clone RP11-458M15, complete sequence
          Length = 174688

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 207   tctttgtgatgagcgcattca 227
             |||||||||||||||||||||
Sbjct: 51686 tctttgtgatgagcgcattca 51706
to top
>dbj|AP002864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0033B09
          Length = 143545

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 43    gccatcgccgcgacgcgcgcc 63
             |||||||||||||||||||||
Sbjct: 74764 gccatcgccgcgacgcgcgcc 74784
to top
>dbj|AB023482.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone
              P0680A03
          Length = 156054

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 43     gccatcgccgcgacgcgcgcc 63
              |||||||||||||||||||||
Sbjct: 149614 gccatcgccgcgacgcgcgcc 149634
to top
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 41      ccgccatcgccgcgacgcgcg 61
               |||||||||||||||||||||
Sbjct: 1173586 ccgccatcgccgcgacgcgcg 1173566
to top
>gb|AY689437.1| Deerpox virus W-1170-84, complete genome
          Length = 170560

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 309   tgaatttatgtctcatgtac 328
             ||||||||||||||||||||
Sbjct: 95054 tgaatttatgtctcatgtac 95035
to top
>ref|XM_370524.1| Magnaporthe grisea 70-15 hypothetical protein (MG11078.4) partial
            mRNA
          Length = 1848

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 69   ccgccgctcccgccggcccc 88
            ||||||||||||||||||||
Sbjct: 1039 ccgccgctcccgccggcccc 1058
to top
>gb|AC102745.10| Mus musculus chromosome 17, clone RP24-371L2, complete sequence
          Length = 189211

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 400    atctcccgtgcttctggaggagatactc 427
              |||||| ||| |||||||||||||||||
Sbjct: 187021 atctcctgtgtttctggaggagatactc 187048
to top
>gb|AC126424.12| Mus musculus chromosome 17, clone RP23-19K10, complete sequence
          Length = 182696

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 400    atctcccgtgcttctggaggagatactc 427
              |||||| ||| |||||||||||||||||
Sbjct: 181891 atctcctgtgtttctggaggagatactc 181864
to top
>gb|AC003009.1|HUAC003009 Homo sapiens Chromosome 16 BAC clone CIT987-SK502C10, complete sequence
          Length = 152503

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 246    aatgatggaagggattttta 265
              ||||||||||||||||||||
Sbjct: 100469 aatgatggaagggattttta 100450
to top
>emb|AL591379.18| Human DNA sequence from clone RP11-381O7 on chromosome 9 Contains an
             aquaporin 7 (AQP7) pseudogene, a novel gene, three novel
             pseudogenes, a pseudogene similar to part of BMS1-like,
             ribosome assembly protein (yeast) (BMS1L), a pseudogene
             similar to part of tripartite motif-containing family
             protein and a CpG island, complete sequence
          Length = 194491

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   tctttgtgatgagcgcattc 226
             ||||||||||||||||||||
Sbjct: 73022 tctttgtgatgagcgcattc 73003
to top
>emb|AL583828.4| Human DNA sequence from clone RP11-501I19 on chromosome 6 Contains a
             novel gene (ortholog of human ADG-90), the 5' end of a
             novel gene (FLJ20330), a novel gene, a  ribosomal protein
             s4x (Rps4x) pseudogene and three CpG islands, complete
             sequence
          Length = 124659

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 56    cgcgcgccattggccgccgc 75
             ||||||||||||||||||||
Sbjct: 43372 cgcgcgccattggccgccgc 43391
to top
>emb|AL445665.20| Human DNA sequence from clone RP11-574E24 on chromosome 9 Contains an
             aquaporin 7 (AQP7) pseudogene and a CpG island, complete
             sequence
          Length = 179371

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 207   tctttgtgatgagcgcattc 226
             ||||||||||||||||||||
Sbjct: 50209 tctttgtgatgagcgcattc 50190
to top
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    ggccgccgctcccgccggcc 86
             ||||||||||||||||||||
Sbjct: 12545 ggccgccgctcccgccggcc 12564
to top
>emb|BX248334.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 1/14
          Length = 343050

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     ccgccgctcccgccggcccc 88
              ||||||||||||||||||||
Sbjct: 335388 ccgccgctcccgccggcccc 335407
to top
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29
          Length = 300800

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 459   cacgtgctcctccaggccgg 478
             ||||||||||||||||||||
Sbjct: 60766 cacgtgctcctccaggccgg 60747
to top
>emb|AL590711.7| Human DNA sequence from clone RP11-284O18 on chromosome 9, complete
             sequence
          Length = 17633

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   tctttgtgatgagcgcattc 226
             ||||||||||||||||||||
Sbjct: 10191 tctttgtgatgagcgcattc 10210
to top
>gb|AC136499.2| Homo sapiens chromosome 19 clone RP11-240C14, complete sequence
          Length = 92689

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 208 ctttgtgatgagcgcattca 227
           ||||||||||||||||||||
Sbjct: 628 ctttgtgatgagcgcattca 609
to top
>gb|AC117415.7| Homo sapiens 3 BAC RP11-43F17 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 161090

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 293   ctttccttaagaaagctgaa 312
             ||||||||||||||||||||
Sbjct: 51646 ctttccttaagaaagctgaa 51665
to top
>gb|AC022167.7| Homo sapiens chromosome 16 clone RP11-77H9, complete sequence
          Length = 180705

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    ccgccgctcccgccggcccc 88
             ||||||||||||||||||||
Sbjct: 63394 ccgccgctcccgccggcccc 63413
to top
>gb|AC010305.3|AC010305 Homo sapiens chromosome 16 clone CTB-45A8, complete sequence
          Length = 121575

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 56    cgcgcgccattggccgccgc 75
             ||||||||||||||||||||
Sbjct: 79145 cgcgcgccattggccgccgc 79126
to top
>dbj|AP003017.1| Mesorhizobium loti MAFF303099 plasmid pMLb DNA, complete genome
          Length = 208315

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 12    ggcgaagagcctcggcgccg 31
             ||||||||||||||||||||
Sbjct: 18889 ggcgaagagcctcggcgccg 18908
to top
>emb|AJ326764.1|HSA326764 Homo sapiens genomic sequence surrounding NotI site, clone
           NR5-IL12C
          Length = 721

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 56  cgcgcgccattggccgccgc 75
           ||||||||||||||||||||
Sbjct: 252 cgcgcgccattggccgccgc 271
to top
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 68      gccgccgctcccgccggccc 87
               ||||||||||||||||||||
Sbjct: 2749390 gccgccgctcccgccggccc 2749371
to top
>emb|CT033750.18| Mouse DNA sequence from clone RP23-263M5 on chromosome 17, complete
              sequence
          Length = 268616

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 400    atctcccgtgcttctggaggagatactc 427
              |||||| ||| |||||||||||||||||
Sbjct: 267422 atctcctgtgtttctggaggagatactc 267395


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,990,825
Number of Sequences: 3902068
Number of extensions: 3990825
Number of successful extensions: 81706
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81205
Number of HSP's gapped (non-prelim): 497
length of query: 478
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 456
effective length of database: 17,147,199,772
effective search space: 7819123096032
effective search space used: 7819123096032
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top