ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name bast74a12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1DAB_DROME (P98081) Protein disabled 30 2.1
2E434_ADECT (P87568) Early E4 30 kDa protein 29 6.2

>DAB_DROME (P98081) Protein disabled|
          Length = 2224

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = -1

Query: 241 MGAALTLAALWYDPIPMPSSTPMAISHS 158
           +G  L+  AL  DP+P P S P +ISHS
Sbjct: 560 LGQLLSTVALNPDPLPAPISIPTSISHS 587



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>E434_ADECT (P87568) Early E4 30 kDa protein|
          Length = 259

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +3

Query: 42  TLHC*LSSYSYWNGQCHCSSHLS 110
           T HC L+    W   CHCS+ LS
Sbjct: 62  TKHCCLAEAQTWRVHCHCSNSLS 84


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,619,550
Number of Sequences: 219361
Number of extensions: 639824
Number of successful extensions: 2533
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2533
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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